CsaV3_7G029400 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G029400
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionRibosomal protein L19
Locationchr7 : 18606659 .. 18608876 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCCCACAATAAAATGGAGTCCGCTTCTTAAACCCTAGAAGGCAACTCCCTTTCTCCTTCATAAGCTTATCTTCTCCAACTAGCGGCCGGGAAGGTCGAACAGAGAAAAATATGGTTTCGCTGAAGCTCCAGAAGAGGCTCGCCGCCAGCGTCCTCAAATGCGGGAGAGGCAAGGTCTGGCTTGATCCCAATGAGGTCAACGAAATCTCCATGGCCAATTCTCGTACGCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTTATTAAGATTTGATTCTGTTGTTTCACTCTGTTGATTGTTCAATCAGTCTACATGGTGTTGAATGGAGTTCTATTGTTTCGATTTCATAGTCTGTAGTTTGTCTTGTATCTCTTAGATTTACTAGATGATAAAATATGTTTTGGGATCTGAAAATTTTTACCCTAGGTTATATGCGTTTGCTGTTCGTAATGGTAGTGTTTTTGTTTCTGTTCTCGCTAATAGTTTGAACTCTAGTTACTTATCTGTTAAATAAATCCTGGTTCTCCTCTTGCGCTGAATCTAATTATCATATAATATTTGAGTTATGTTGAATCATTTGCATCAGATTGCTAGTTGGTGATATCTTCCTGTTGTATAGGAAATCGTTTGGTATTCTTGAACAATTTTTTATGGGTTAACGAAGTTCTAAAATTTGTTCCTCTTAGGTTCTTAACACAGCTAGGAAGGTACTTTTATATTGAACTTGTTTCAGTCTTCCCCCTTGTTATTCTTCTAAATCCCAAAGCCCTAGTTTTTTATTCTAGCGATTTTTTTTTTTTTTTGAATATGTAATAATAACAGAACGGTTTATGATTATCTTGTTAATTAATGTCTGGATTGTTGACGATAGGTCAAAATATAAGGAAGCTGGTGAAGGATGGTTTCATCATCAGGAAGCCAACCAAGATCCACTCTCGTTCTCGAGCACGCCGCATGAAGGAGGCCAAGAGAAAGGGTCGCCATTCTGGATATGGTATATTGTTGCCTAAGTCATGATTTATAAATACGGATACTGTTTTAGAAAAACCTTTGATGTCGTATCATTGCATCACTGATTTTCTTCTTGTTGTGACACAGTTTTTTATTTAATGAACCATGATTCCTTCTGGTGTGTTAAAATTCTCATTTTTCTAATTGTATTCAGGTAAGCGTAGGGGTACTAGGGAGGCAAGATTGCCAACCAAGATTCTCTGGATGCGGAGAATGCGTGTCCTTAGGAGATTACTCCGCAAATATAGAGAATCTAAGAAGATTGACAAGCACATGTATCATGATATGTACATGAAAGTAAAGGGTAATGTCTTTAAGAATAAGCGTGTGCTGATGGAGAGCATCCACAAGTCAAAGGCCGAAAAGGCAAGAGAGAAGACATTGTCAGATCAATTTGAGGCCAAGAGGGCTAAGAACAAAGCCAGCAGGGAAAGGAAATTTGCTCGGAGGGAGGAACGATTGGCACAGGTTTATTTGCTATCTCACTCTTGATTATTACCGACCTATGTTGTTTCTTACCTTCAATCCCATGACATCTGTCTTATCATTGTAGGGACCTGGAGAAAAACAACCACCAGTGACATCGGCAGCCCAACCTGCTGCTGCGTCTCAATCTACTCAGTAAGTATAAGTATCAATCTTCAAAATCCATGTAAATCTAGCTTCATTTTGCAATGTTAAGTTTCCTTTCATTTTGTGCAGGGCGTCAAAGAAATCAAAGAAGTGAGAATTTTGCAAAAGGAGTTTCTTAGGAAGGTTTACTTCTGATGTTTTCTGTGTCCTCCATTATTCTAGAGTAGTAGTTTTCAGGAGGCTTTTTGCAGCCTTTTGGACTTTTGGACCTTGTTGCTTCATATCCAAGACAAAGGATTTTAAGCCTGGTAATTTTGTTAGTCTATGGTTCATTGCGTTTTTTGTCAACAATGTTTGCTTAATGGAATTTATTTGAGATTAAATGCATATTGATTGATTTAGGGTGAGTGAATTGTGTATGATTTTGGATTTGGGGTATTTACAATTCTTTAACTCATCAGTTGACACTTGTTCTGCTTGTACGCCATTTGTGTCTAGAACTAATCTCTAATATGAAGTGCTGAAAAGAAAGTAGTACAACAAAGGTATGGGGTTGAGCAATTGAGCCTTGACTTCTTGGGACAAAGGTCATATTAATTCCATTAAGCCTTCAAAATGATTAAGG

mRNA sequence

ATGGTTTCGCTGAAGCTCCAGAAGAGGCTCGCCGCCAGCGTCCTCAAATGCGGGAGAGGCAAGGTCTGGCTTGATCCCAATGAGGTCAACGAAATCTCCATGGCCAATTCTCGTCAAAATATAAGGAAGCTGGTGAAGGATGGTTTCATCATCAGGAAGCCAACCAAGATCCACTCTCGTTCTCGAGCACGCCGCATGAAGGAGGCCAAGAGAAAGGGTCGCCATTCTGGATATGGTAAGCGTAGGGGTACTAGGGAGGCAAGATTGCCAACCAAGATTCTCTGGATGCGGAGAATGCGTGTCCTTAGGAGATTACTCCGCAAATATAGAGAATCTAAGAAGATTGACAAGCACATGTATCATGATATGTACATGAAAGTAAAGGGTAATGTCTTTAAGAATAAGCGTGTGCTGATGGAGAGCATCCACAAGTCAAAGGCCGAAAAGGCAAGAGAGAAGACATTGTCAGATCAATTTGAGGCCAAGAGGGCTAAGAACAAAGCCAGCAGGGAAAGGAAATTTGCTCGGAGGGAGGAACGATTGGCACAGGGACCTGGAGAAAAACAACCACCAGTGACATCGGCAGCCCAACCTGCTGCTGCGTCTCAATCTACTCAGGCGTCAAAGAAATCAAAGAAGTGA

Coding sequence (CDS)

ATGGTTTCGCTGAAGCTCCAGAAGAGGCTCGCCGCCAGCGTCCTCAAATGCGGGAGAGGCAAGGTCTGGCTTGATCCCAATGAGGTCAACGAAATCTCCATGGCCAATTCTCGTCAAAATATAAGGAAGCTGGTGAAGGATGGTTTCATCATCAGGAAGCCAACCAAGATCCACTCTCGTTCTCGAGCACGCCGCATGAAGGAGGCCAAGAGAAAGGGTCGCCATTCTGGATATGGTAAGCGTAGGGGTACTAGGGAGGCAAGATTGCCAACCAAGATTCTCTGGATGCGGAGAATGCGTGTCCTTAGGAGATTACTCCGCAAATATAGAGAATCTAAGAAGATTGACAAGCACATGTATCATGATATGTACATGAAAGTAAAGGGTAATGTCTTTAAGAATAAGCGTGTGCTGATGGAGAGCATCCACAAGTCAAAGGCCGAAAAGGCAAGAGAGAAGACATTGTCAGATCAATTTGAGGCCAAGAGGGCTAAGAACAAAGCCAGCAGGGAAAGGAAATTTGCTCGGAGGGAGGAACGATTGGCACAGGGACCTGGAGAAAAACAACCACCAGTGACATCGGCAGCCCAACCTGCTGCTGCGTCTCAATCTACTCAGGCGTCAAAGAAATCAAAGAAGTGA

Protein sequence

MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREERLAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK
Homology
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BLAST of CsaV3_7G029400 vs. NCBI nr
Match: XP_004136019.1 (PREDICTED: 60S ribosomal protein L19-1 [Cucumis sativus])

HSP 1 Score: 388.7 bits (997), Expect = 1.3e-104
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 214
           LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK
Sbjct: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 213

[Close]
BLAST of CsaV3_7G029400 vs. NCBI nr
Match: XP_008451555.1 (PREDICTED: 60S ribosomal protein L19-1-like [Cucumis melo])

HSP 1 Score: 384.4 bits (986), Expect = 2.5e-103
Identity = 210/213 (98.59%), Postives = 211/213 (99.06%), Query Frame = 0 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRRGTREARLPTK+LWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKVLWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 214
           LAQGPGEKQPPVTSAAQPAA SQSTQASKKSKK
Sbjct: 181 LAQGPGEKQPPVTSAAQPAAVSQSTQASKKSKK 213

[Close]
BLAST of CsaV3_7G029400 vs. NCBI nr
Match: XP_022959808.1 (60S ribosomal protein L19-1-like [Cucurbita moschata])

HSP 1 Score: 376.3 bits (965), Expect = 6.8e-101
Identity = 207/213 (97.18%), Postives = 210/213 (98.59%), Query Frame = 0 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCG+GKVWLDPNEVNEISMANSRQNIRKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 214
           LAQGPGEKQPPVTSAAQPAA  QSTQ SKKSKK
Sbjct: 181 LAQGPGEKQPPVTSAAQPAA--QSTQLSKKSKK 211

[Close]
BLAST of CsaV3_7G029400 vs. NCBI nr
Match: XP_023004655.1 (60S ribosomal protein L19-1-like [Cucurbita maxima])

HSP 1 Score: 374.8 bits (961), Expect = 2.0e-100
Identity = 206/213 (96.71%), Postives = 209/213 (98.12%), Query Frame = 0 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCG+GKVWLDPNEVNEISMANSRQNIRKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 214
           LAQGPGEKQPP TSAAQPAA  QSTQ SKKSKK
Sbjct: 181 LAQGPGEKQPPATSAAQPAA--QSTQQSKKSKK 211

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BLAST of CsaV3_7G029400 vs. NCBI nr
Match: XP_018818006.1 (PREDICTED: 60S ribosomal protein L19-1 [Juglans regia])

HSP 1 Score: 363.2 bits (931), Expect = 6.0e-97
Identity = 203/213 (95.31%), Postives = 206/213 (96.71%), Query Frame = 0 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVW+DPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWIDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRRGTREARLPTK+LWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKVLWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 214
           LAQGPGEK  PV  AA P AASQ TQA+KKSKK
Sbjct: 181 LAQGPGEK--PV--AAPPVAASQPTQAAKKSKK 209

[Close]
BLAST of CsaV3_7G029400 vs. TAIR10
Match: AT1G02780.1 (Ribosomal protein L19e family protein)

HSP 1 Score: 323.2 bits (827), Expect = 1.2e-88
Identity = 173/192 (90.10%), Postives = 184/192 (95.83%), Query Frame = 0 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASV+KCG+GKVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR+MK AK KGRHSGYGKR+GTREARLPTK+LWMRRMRVLRRLL+KYRE+KKIDKHMY
Sbjct: 61  SRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYM+VKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKQPPV 193
           LA+GPG    PV
Sbjct: 181 LAKGPGGDVAPV 192

[Close]
BLAST of CsaV3_7G029400 vs. TAIR10
Match: AT3G16780.1 (Ribosomal protein L19e family protein)

HSP 1 Score: 320.9 bits (821), Expect = 6.1e-88
Identity = 177/213 (83.10%), Postives = 188/213 (88.26%), Query Frame = 0 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLK+QKRLAASV+KCG+GKVWLDPNE  +ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR + EAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRR L KYRESKKID+HMY
Sbjct: 61  SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHK KAEKAREKTL+DQFEAKR KNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKNKASRERKFARREER 180

Query: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 214
           LAQGPG  +        PA A Q  + +KK  K
Sbjct: 181 LAQGPGGGE-----TTTPAGAPQQPEVTKKKSK 208

[Close]
BLAST of CsaV3_7G029400 vs. TAIR10
Match: AT4G02230.1 (Ribosomal protein L19e family protein)

HSP 1 Score: 317.8 bits (813), Expect = 5.2e-87
Identity = 179/213 (84.04%), Postives = 195/213 (91.55%), Query Frame = 0 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLA+SVLKCG+ KVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR++  AKRKGRHSGYGKR+GTREARLPTK+LWMRRMRVLRRLL+KYRE+KKID+HMY
Sbjct: 61  SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 214
           LA+GPG   P   +AA PA  ++    +KKSKK
Sbjct: 181 LAKGPGGDIP---AAAPPAQTAE--VPAKKSKK 208

[Close]
BLAST of CsaV3_7G029400 vs. TAIR10
Match: AT4G16030.1 (Ribosomal protein L19e family protein)

HSP 1 Score: 59.3 bits (142), Expect = 3.3e-09
Identity = 62/143 (43.36%), Postives = 73/143 (51.05%), Query Frame = 0 

Query: 58  HSRSRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRL----------LR 117
           HSRSRAR      RK RH+GYGK   T EA            R+++RL            
Sbjct: 7   HSRSRAR------RKCRHTGYGK--DTMEA----------LRRIMKRLTXXXXXXXXXXX 66

Query: 118 KYRESKKIDKHM-YHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKN 177
           K+  +KKIDK + YHDM+MKVKG V+KNK VLMES+HKS                     
Sbjct: 67  KFCWNKKIDKLVYYHDMFMKVKGKVYKNKCVLMESMHKS--------------------- 108

Query: 178 KASRERKFARREERLAQGP-GEK 189
             SRERKF+  E RLA  P GEK
Sbjct: 127 --SRERKFSGSEMRLALEPEGEK 108

[Close]
BLAST of CsaV3_7G029400 vs. Swiss-Prot
Match: sp|Q9SRX2|RL191_ARATH (60S ribosomal protein L19-1 OS=Arabidopsis thaliana OX=3702 GN=RPL19A PE=2 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 2.2e-87
Identity = 173/192 (90.10%), Postives = 184/192 (95.83%), Query Frame = 0 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASV+KCG+GKVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR+MK AK KGRHSGYGKR+GTREARLPTK+LWMRRMRVLRRLL+KYRE+KKIDKHMY
Sbjct: 61  SRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYM+VKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKQPPV 193
           LA+GPG    PV
Sbjct: 181 LAKGPGGDVAPV 192

[Close]
BLAST of CsaV3_7G029400 vs. Swiss-Prot
Match: sp|Q9LUQ6|RL192_ARATH (60S ribosomal protein L19-2 OS=Arabidopsis thaliana OX=3702 GN=RPL19B PE=2 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.1e-86
Identity = 177/213 (83.10%), Postives = 188/213 (88.26%), Query Frame = 0 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLK+QKRLAASV+KCG+GKVWLDPNE  +ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR + EAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRR L KYRESKKID+HMY
Sbjct: 61  SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHK KAEKAREKTL+DQFEAKR KNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKNKASRERKFARREER 180

Query: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 214
           LAQGPG  +        PA A Q  + +KK  K
Sbjct: 181 LAQGPGGGE-----TTTPAGAPQQPEVTKKKSK 208

[Close]
BLAST of CsaV3_7G029400 vs. Swiss-Prot
Match: sp|P49693|RL193_ARATH (60S ribosomal protein L19-3 OS=Arabidopsis thaliana OX=3702 GN=RPL19C PE=2 SV=3)

HSP 1 Score: 317.8 bits (813), Expect = 9.4e-86
Identity = 179/213 (84.04%), Postives = 195/213 (91.55%), Query Frame = 0 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLA+SVLKCG+ KVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR++  AKRKGRHSGYGKR+GTREARLPTK+LWMRRMRVLRRLL+KYRE+KKID+HMY
Sbjct: 61  SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 214
           LA+GPG   P   +AA PA  ++    +KKSKK
Sbjct: 181 LAKGPGGDIP---AAAPPAQTAE--VPAKKSKK 208

[Close]
BLAST of CsaV3_7G029400 vs. Swiss-Prot
Match: sp|P36241|RL19_DROME (60S ribosomal protein L19 OS=Drosophila melanogaster OX=7227 GN=RpL19 PE=1 SV=2)

HSP 1 Score: 237.3 bits (604), Expect = 1.6e-61
Identity = 121/165 (73.33%), Postives = 142/165 (86.06%), Query Frame = 0 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           M SLKLQKRLAASVL+CG+ KVWLDPNE+NEI+  NSRQNIRKL+KDG II+KP  +HSR
Sbjct: 1   MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
            R R+  EA+RKGRH G+GKR+GT  AR+PTK+LWM+R RVLRRLL+KYR+SKKID+H+Y
Sbjct: 61  YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 166
           HD+YMK KGNVFKNKRVLME IHK KAEK R K L+DQ EA+R K
Sbjct: 121 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQK 165

[Close]
BLAST of CsaV3_7G029400 vs. Swiss-Prot
Match: sp|Q3T0W9|RL19_BOVIN (60S ribosomal protein L19 OS=Bos taurus OX=9913 GN=RPL19 PE=2 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.0e-59
Identity = 117/165 (70.91%), Postives = 141/165 (85.45%), Query Frame = 0 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           M  L+LQKRLA+SVL+CG+ KVWLDPNE NEI+ ANSRQ IRKL+KDG IIRKP  +HSR
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           +R R+   A+RKGRH G GKR+GT  AR+P K+ WMRRMR+LRRLLR+YRESKKID+HMY
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 166
           H +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L+DQ EA+R+K
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSK 165

[Close]
BLAST of CsaV3_7G029400 vs. TrEMBL
Match: tr|A0A1S3BSJ2|A0A1S3BSJ2_CUCME (Ribosomal protein L19 OS=Cucumis melo OX=3656 GN=LOC103492800 PE=3 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 1.7e-103
Identity = 210/213 (98.59%), Postives = 211/213 (99.06%), Query Frame = 0 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRRGTREARLPTK+LWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKVLWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 214
           LAQGPGEKQPPVTSAAQPAA SQSTQASKKSKK
Sbjct: 181 LAQGPGEKQPPVTSAAQPAAVSQSTQASKKSKK 213

[Close]
BLAST of CsaV3_7G029400 vs. TrEMBL
Match: tr|A0A2I4EF24|A0A2I4EF24_9ROSI (Ribosomal protein L19 OS=Juglans regia OX=51240 GN=LOC108989019 PE=3 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 3.9e-97
Identity = 203/213 (95.31%), Postives = 206/213 (96.71%), Query Frame = 0 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVW+DPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWIDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRRGTREARLPTK+LWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKVLWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 214
           LAQGPGEK  PV  AA P AASQ TQA+KKSKK
Sbjct: 181 LAQGPGEK--PV--AAPPVAASQPTQAAKKSKK 209

[Close]
BLAST of CsaV3_7G029400 vs. TrEMBL
Match: tr|A0A2P5BJE4|A0A2P5BJE4_9ROSA (Ribosomal protein L19 OS=Trema orientalis OX=63057 GN=TorRG33x02_319050 PE=3 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 6.7e-97
Identity = 198/213 (92.96%), Postives = 203/213 (95.31%), Query Frame = 0 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRL+ASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRRLLRKYRESKKID+HMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 214
           LAQGPGEK P  T AA PA  +Q TQ SKK+KK
Sbjct: 181 LAQGPGEKLPAATPAAPPAVTTQPTQGSKKAKK 213

[Close]
BLAST of CsaV3_7G029400 vs. TrEMBL
Match: tr|A0A067JW78|A0A067JW78_JATCU (Ribosomal protein L19 OS=Jatropha curcas OX=180498 GN=JCGZ_13972 PE=3 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 4.4e-96
Identity = 200/213 (93.90%), Postives = 205/213 (96.24%), Query Frame = 0 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCG+GKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 214
           LAQGPG ++P    AA PAAASQ T+ SKKSKK
Sbjct: 181 LAQGPGGEKP---VAAPPAAASQPTEGSKKSKK 210

[Close]
BLAST of CsaV3_7G029400 vs. TrEMBL
Match: tr|A0A2I4EZH0|A0A2I4EZH0_9ROSI (Ribosomal protein L19 OS=Juglans regia OX=51240 GN=LOC108994144 PE=3 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 1.3e-95
Identity = 196/213 (92.02%), Postives = 201/213 (94.37%), Query Frame = 0 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVW+DPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWIDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMK AKRKGRHSGYGKR+GTREARLPTK+LWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKVAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 214
           LAQGPGEK      A+ P  ASQ TQ +KKSKK
Sbjct: 181 LAQGPGEKPAAAPPASTPVTASQPTQTTKKSKK 213

The following BLAST results are available for this feature:
BLAST of CsaV3_7G029400 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004136019.11.3e-104100.00PREDICTED: 60S ribosomal protein L19-1 [Cucumis sativus][more]
XP_008451555.12.5e-10398.59PREDICTED: 60S ribosomal protein L19-1-like [Cucumis melo][more]
XP_022959808.16.8e-10197.1860S ribosomal protein L19-1-like [Cucurbita moschata][more]
XP_023004655.12.0e-10096.7160S ribosomal protein L19-1-like [Cucurbita maxima][more]
XP_018818006.16.0e-9795.31PREDICTED: 60S ribosomal protein L19-1 [Juglans regia][more]
BLAST of CsaV3_7G029400 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G02780.11.2e-8890.10Ribosomal protein L19e family protein[more]
AT3G16780.16.1e-8883.10Ribosomal protein L19e family protein[more]
AT4G02230.15.2e-8784.04Ribosomal protein L19e family protein[more]
AT4G16030.13.3e-0943.36Ribosomal protein L19e family protein[more]
BLAST of CsaV3_7G029400 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SRX2|RL191_ARATH2.2e-8790.1060S ribosomal protein L19-1 OS=Arabidopsis thaliana OX=3702 GN=RPL19A PE=2 SV=1[more]
sp|Q9LUQ6|RL192_ARATH1.1e-8683.1060S ribosomal protein L19-2 OS=Arabidopsis thaliana OX=3702 GN=RPL19B PE=2 SV=1[more]
sp|P49693|RL193_ARATH9.4e-8684.0460S ribosomal protein L19-3 OS=Arabidopsis thaliana OX=3702 GN=RPL19C PE=2 SV=3[more]
sp|P36241|RL19_DROME1.6e-6173.3360S ribosomal protein L19 OS=Drosophila melanogaster OX=7227 GN=RpL19 PE=1 SV=2[more]
sp|Q3T0W9|RL19_BOVIN2.0e-5970.9160S ribosomal protein L19 OS=Bos taurus OX=9913 GN=RPL19 PE=2 SV=1[more]
BLAST of CsaV3_7G029400 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BSJ2|A0A1S3BSJ2_CUCME1.7e-10398.59Ribosomal protein L19 OS=Cucumis melo OX=3656 GN=LOC103492800 PE=3 SV=1[more]
tr|A0A2I4EF24|A0A2I4EF24_9ROSI3.9e-9795.31Ribosomal protein L19 OS=Juglans regia OX=51240 GN=LOC108989019 PE=3 SV=1[more]
tr|A0A2P5BJE4|A0A2P5BJE4_9ROSA6.7e-9792.96Ribosomal protein L19 OS=Trema orientalis OX=63057 GN=TorRG33x02_319050 PE=3 SV=... [more]
tr|A0A067JW78|A0A067JW78_JATCU4.4e-9693.90Ribosomal protein L19 OS=Jatropha curcas OX=180498 GN=JCGZ_13972 PE=3 SV=1[more]
tr|A0A2I4EZH0|A0A2I4EZH0_9ROSI1.3e-9592.02Ribosomal protein L19 OS=Juglans regia OX=51240 GN=LOC108994144 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0022625cytosolic large ribosomal subunit
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: INTERPRO
TermDefinition
IPR03597060S_ribosomal_L19/L19e_sf
IPR033935Ribosomal_L19_euka
IPR023638Ribosomal_L19/L19e_CS
IPR015972Ribosomal_L19/L19e_dom1
IPR000196Ribosomal_L19/L19e
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0016740 transferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G029400.1CsaV3_7G029400.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000196Ribosomal protein L19/L19eSMARTSM01416Ribosomal_L19e_2coord: 3..146
e-value: 1.2E-96
score: 337.0
IPR000196Ribosomal protein L19/L19ePFAMPF01280Ribosomal_L19ecoord: 4..146
e-value: 2.2E-66
score: 222.3
IPR000196Ribosomal protein L19/L19eHAMAPMF_01475Ribosomal_L19ecoord: 3..149
score: 20.575
NoneNo IPR availableGENE3DG3DSA:1.10.1200.240coord: 57..189
e-value: 8.9E-58
score: 196.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..184
NoneNo IPR availablePANTHERPTHR1072260S RIBOSOMAL PROTEIN L19coord: 1..213
NoneNo IPR availablePANTHERPTHR10722:SF1160S RIBOSOMAL PROTEIN L19-1-RELATEDcoord: 1..213
IPR015972Ribosomal protein L19/L19e, domain 1GENE3DG3DSA:1.10.1650.10coord: 1..56
e-value: 3.3E-32
score: 112.0
IPR023638Ribosomal protein L19/L19e conserved sitePROSITEPS00526RIBOSOMAL_L19Ecoord: 7..26
IPR033935Ribosomal protein L19, eukaryoticCDDcd01417Ribosomal_L19e_Ecoord: 4..167
e-value: 3.2818E-76
score: 228.389
IPR035970Ribosomal protein L19/L19e superfamilySUPERFAMILYSSF48140Ribosomal protein L19 (L19e)coord: 3..144

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_7G029400CSPI07G17600Wild cucumber (PI 183967)cpicucB414
CsaV3_7G029400Cucsa.205460Cucumber (Gy14) v1cgycucB330
CsaV3_7G029400CmaCh17G010770Cucurbita maxima (Rimu)cmacucB0462
CsaV3_7G029400CmaCh08G004320Cucurbita maxima (Rimu)cmacucB1084
CsaV3_7G029400CmoCh08G004260Cucurbita moschata (Rifu)cmocucB1066
CsaV3_7G029400CmoCh17G010500Cucurbita moschata (Rifu)cmocucB0455
CsaV3_7G029400Cp4.1LG17g07240Cucurbita pepo (Zucchini)cpecucB0422
CsaV3_7G029400CsGy7G016030Cucumber (Gy14) v2cgybcucB347
CsaV3_7G029400Carg07164Silver-seed gourdcarcucB0128
CsaV3_7G029400Carg12093Silver-seed gourdcarcucB0601
CsaV3_7G029400Cla015087Watermelon (97103) v1cucwmB584
CsaV3_7G029400MELO3C015988Melon (DHL92) v3.5.1cucmeB550
CsaV3_7G029400ClCG09G005680Watermelon (Charleston Gray)cucwcgB541
CsaV3_7G029400Lsi02G024140Bottle gourd (USVL1VR-Ls)cuclsiB538
CsaV3_7G029400MELO3C015988.2Melon (DHL92) v3.6.1cucmedB538
CsaV3_7G029400Cla97C09G168180Watermelon (97103) v2cucwmbB587
CsaV3_7G029400Bhi09G000729Wax gourdcucwgoB716
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G029400Cucumber (Chinese Long) v3cuccucB185
CsaV3_7G029400Silver-seed gourdcarcucB0858
CsaV3_7G029400Cucumber (Gy14) v2cgybcucB195
CsaV3_7G029400Cucumber (Gy14) v1cgycucB108
CsaV3_7G029400Cucurbita pepo (Zucchini)cpecucB0188
CsaV3_7G029400Wild cucumber (PI 183967)cpicucB246
CsaV3_7G029400Bottle gourd (USVL1VR-Ls)cuclsiB550
CsaV3_7G029400Melon (DHL92) v3.5.1cucmeB584
CsaV3_7G029400Melon (DHL92) v3.6.1cucmedB571
CsaV3_7G029400Watermelon (Charleston Gray)cucwcgB548
CsaV3_7G029400Watermelon (Charleston Gray)cucwcgB555
CsaV3_7G029400Watermelon (97103) v1cucwmB593
CsaV3_7G029400Watermelon (97103) v1cucwmB601
CsaV3_7G029400Watermelon (97103) v2cucwmbB536
CsaV3_7G029400Watermelon (97103) v2cucwmbB594
CsaV3_7G029400Wax gourdcucwgoB672