Cucsa.205460 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.205460
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionRibosomal protein L19
Locationscaffold01416 : 535681 .. 537800 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCTAATAGGCCCACAATAAAATGGAGTCCGCTTCTTAAACCCTAGAAGGCAACTCCCTTTCTCCTTCATAAGCTTATCTTCTCCAACTAGCGGCCGGGAAGGTCGAACAGAGAAAAATATGGTTTCGCTGAAGCTCCAGAAGAGGCTCGCCGCCAGCGTCCTCAAATGCGGGAGAGGCAAGGTCTGGCTTGATCCCAATGAGGTCAACGAAATCTCCATGGCCAATTCTCGTACGCTTtCTTtCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTTATTAAGATTTGATTCTGTTGTTTCACTCTGTTGATTGTTCAATCAGTCTACATGGTGTTGAATGGAGTTCTATTGTTTCGATTTCATAGTCTGTAGTTTGTCTTGTATCTCTTAGATTTACTAGATGATAAAATATGTTTTGGGATCTGAAAATTTTTACCCTAGGTTATATGCGTTTGCTGTTCGTAATGGTAGTGTTTTTGTTTCTGTTCTCGCTAATAGTTTGAACTCTAGTTACTTATCTGTTAAATAAATCCTGGTTCTCCTCTTGCGCTGAATCTAATTATCATATAATATTTGAGTTATGTTGAATCATTTGCATCAGATTGCTAGTTGGTGATATCTTCCTGTTGTATAGGAAATCGTTTGGTATTCTTGAACAATTTTTTATGGGTTAACGAAGTTCTAAAATTTGTTCCTCTTAGGTTCTTAACACAGCTAGGAAGGTACTTTTATATTGAACTTGTTTCAGTCTTCCCCCTTGTTATTCTTCTAAATCCCAAAGCCCTAGTTTTTTATTCTAGCGATTTTTTTTTTTttGAATATGTAATAATAACAGAACGGTTTATGATTATCTTGTTAATTAATGTCTGGATTGTTGACGATAGGTCAAAATATAAGGAAGCTGGTGAAGGATGGTTTCATCATCAGGAAGCCAACCAAGATCCACTCTCGTTCTCGAGCACGCCGCATGAAGGAGGCCAAGAGAAAGGGTCGCCATTCTGGATATGGTATATTGTTGCCTAAGTCATGATTTATAAATACGGATACTGTTTTAGAAAAACCTTTGATGTCGTATCATTGCATCACTGATTTTCTTCTTGTTGTGACACAGTTTTTTATTTAATGAACCATGATTCCTTCTGGTGTGTTAAAATTCTCATTTTTCTAATTGTATTCAGGTAAGCGTAGGGGTACTAGGGAGGCAAGATTGCCAACCAAGATTCTCTGGATGCGGAGAATGCGTGTCCTTAGGAGATTACTCCGCAAATATAGAGAATCTAAGAAGATTGACAAGCACATGTATCATGATATGTACATGAAAGTAAAGGGTAATGTCTTTAAGAATAAGCGTGTGCTGATGGAGAGCATCCACAAGTCAAAGGCCGAAAAGGCAAGAGAGAAGACATTGTCAGATCAATTTGAGGCCAAGAGGGCTAAGAACAAAGCCAGCAGGGAAAGGAAATTTGCTCGGAGGGAGGAACGATTGGCACAGGTTTATTTGCTATCTCACTCTTGATTATTACCGACCTATGTTGTTTCTTACCTTCAATCCCATGACATCTGTCTTATCATTGTAGGGACCTGGAGAAAAACAACCACCAGTGACATCGGCAGCCCAACCTGCTGCTGCGTCTCAATCTACTCAGTAAGTATAAGTATCAATCTTCAAAATCCATGTAAATCTAGCTTCATTTTGCAATGTTAAGTTTCCTTTCATTTTGTGCAGGGCGTCAAAGAAATCAAAGAAGTGAGAATTTTGCAAAAGGAGTTTCTTAGGAAGGTTTACTTCTGATGTTTTCTGTGTCCTCCATTATTCTAGAGTAGTAGTTTTCAGGAGGCTTTTTGCAGCCTTTTGGACTTTTGGACCTTGTTGCTTCATATCCAAGACAAAGGATTTTAAGCCTGGTAATTTTGTTAGTCTATGGTTCATTGCGTTTTTTGTCAACAATGTTTGCTTAATGGAATTTATTTGAGATTAAATGCATATTGATTGATTTAGGGTGAGTGAATTGTGTATGATTTTGGATTTGGGGTATTTACAATTCTTTAACTCATCAGTTGACACTTGTTCTGCTTGTACGCCATTTGTGTCTAGAACTAATCTCTAATATGAAGTGC

mRNA sequence

GTCTAATAGGCCCACAATAAAATGGAGTCCGCTTCTTAAACCCTAGAAGGCAACTCCCTTTCTCCTTCATAAGCTTATCTTCTCCAACTAGCGGCCGGGAAGGTCGAACAGAGAAAAATATGGTTTCGCTGAAGCTCCAGAAGAGGCTCGCCGCCAGCGTCCTCAAATGCGGGAGAGGCAAGGTCTGGCTTGATCCCAATGAGGTCAACGAAATCTCCATGGCCAATTCTCGTCAAAATATAAGGAAGCTGGTGAAGGATGGTTTCATCATCAGGAAGCCAACCAAGATCCACTCTCGTTCTCGAGCACGCCGCATGAAGGAGGCCAAGAGAAAGGGTCGCCATTCTGGATATGGTAAGCGTAGGGGTACTAGGGAGGCAAGATTGCCAACCAAGATTCTCTGGATGCGGAGAATGCGTGTCCTTAGGAGATTACTCCGCAAATATAGAGAATCTAAGAAGATTGACAAGCACATGTATCATGATATGTACATGAAAGTAAAGGGTAATGTCTTTAAGAATAAGCGTGTGCTGATGGAGAGCATCCACAAGTCAAAGGCCGAAAAGGCAAGAGAGAAGACATTGTCAGATCAATTTGAGGCCAAGAGGGCTAAGAACAAAGCCAGCAGGGAAAGGAAATTTGCTCGGAGGGAGGAACGATTGGCACAGGGACCTGGAGAAAAACAACCACCAGTGACATCGGCAGCCCAACCTGCTGCTGCGTCTCAATCTACTCAGGCGTCAAAGAAATCAAAGAAGTGAGAATTTTGCAAAAGGAGTTTCTTAGGAAGGTTTACTTCTGATGTTTTCTGTGTCCTCCATTATTCTAGAGTAGTAGTTTTCAGGAGGCTTTTTGCAGCCTTTTGGACTTTTGGACCTTGTTGCTTCATATCCAAGACAAAGGATTTTAAGCCTGGTAATTTTGTTAGTCTATGGTTCATTGCGTTTTTTGTCAACAATGTTTGCTTAATGGAATTTATTTGAGATTAAATGCATATTGATTGATTTAGGGTGAGTGAATTGTGTATGATTTTGGATTTGGGGTATTTACAATTCTTTAACTCATCAGTTGACACTTGTTCTGCTTGTACGCCATTTGTGTCTAGAACTAATCTCTAATATGAAGTGC

Coding sequence (CDS)

ATGGTTTCGCTGAAGCTCCAGAAGAGGCTCGCCGCCAGCGTCCTCAAATGCGGGAGAGGCAAGGTCTGGCTTGATCCCAATGAGGTCAACGAAATCTCCATGGCCAATTCTCGTCAAAATATAAGGAAGCTGGTGAAGGATGGTTTCATCATCAGGAAGCCAACCAAGATCCACTCTCGTTCTCGAGCACGCCGCATGAAGGAGGCCAAGAGAAAGGGTCGCCATTCTGGATATGGTAAGCGTAGGGGTACTAGGGAGGCAAGATTGCCAACCAAGATTCTCTGGATGCGGAGAATGCGTGTCCTTAGGAGATTACTCCGCAAATATAGAGAATCTAAGAAGATTGACAAGCACATGTATCATGATATGTACATGAAAGTAAAGGGTAATGTCTTTAAGAATAAGCGTGTGCTGATGGAGAGCATCCACAAGTCAAAGGCCGAAAAGGCAAGAGAGAAGACATTGTCAGATCAATTTGAGGCCAAGAGGGCTAAGAACAAAGCCAGCAGGGAAAGGAAATTTGCTCGGAGGGAGGAACGATTGGCACAGGGACCTGGAGAAAAACAACCACCAGTGACATCGGCAGCCCAACCTGCTGCTGCGTCTCAATCTACTCAGGCGTCAAAGAAATCAAAGAAGTGA

Protein sequence

MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREERLAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK*
Homology
[Close]
BLAST of Cucsa.205460 vs. Swiss-Prot
Match: RL191_ARATH (60S ribosomal protein L19-1 OS=Arabidopsis thaliana GN=RPL19A PE=2 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 1.4e-97
Identity = 184/215 (85.58%), Postives = 196/215 (91.16%), Query Frame = 1 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASV+KCG+GKVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR+MK AK KGRHSGYGKR+GTREARLPTK+LWMRRMRVLRRLL+KYRE+KKIDKHMY
Sbjct: 61  SRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYM+VKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKQPPVTSAAQPAAASQSTQA--SKKSKK 214
           LA+GPG    PV + A PAA    T A   KKSKK
Sbjct: 181 LAKGPGGDVAPVAAPA-PAATPAPTAAVPKKKSKK 214

[Close]
BLAST of Cucsa.205460 vs. Swiss-Prot
Match: RL192_ARATH (60S ribosomal protein L19-2 OS=Arabidopsis thaliana GN=RPL19B PE=2 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 9.8e-96
Identity = 177/213 (83.10%), Postives = 188/213 (88.26%), Query Frame = 1 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLK+QKRLAASV+KCG+GKVWLDPNE  +ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR + EAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRR L KYRESKKID+HMY
Sbjct: 61  SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHK KAEKAREKTL+DQFEAKR KNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKNKASRERKFARREER 180

Query: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 214
           LAQGPG  +        PA A Q  + +KK  K
Sbjct: 181 LAQGPGGGE-----TTTPAGAPQQPEVTKKKSK 208

[Close]
BLAST of Cucsa.205460 vs. Swiss-Prot
Match: RL193_ARATH (60S ribosomal protein L19-3 OS=Arabidopsis thaliana GN=RPL19C PE=2 SV=3)

HSP 1 Score: 347.8 bits (891), Expect = 8.3e-95
Identity = 179/213 (84.04%), Postives = 195/213 (91.55%), Query Frame = 1 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLA+SVLKCG+ KVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR++  AKRKGRHSGYGKR+GTREARLPTK+LWMRRMRVLRRLL+KYRE+KKID+HMY
Sbjct: 61  SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 214
           LA+GPG   P   +AA PA  ++    +KKSKK
Sbjct: 181 LAKGPGGDIP---AAAPPAQTAE--VPAKKSKK 208

[Close]
BLAST of Cucsa.205460 vs. Swiss-Prot
Match: RL19_DROME (60S ribosomal protein L19 OS=Drosophila melanogaster GN=RpL19 PE=1 SV=2)

HSP 1 Score: 264.2 bits (674), Expect = 1.2e-69
Identity = 128/182 (70.33%), Postives = 153/182 (84.07%), Query Frame = 1 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           M SLKLQKRLAASVL+CG+ KVWLDPNE+NEI+  NSRQNIRKL+KDG II+KP  +HSR
Sbjct: 1   MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
            R R+  EA+RKGRH G+GKR+GT  AR+PTK+LWM+R RVLRRLL+KYR+SKKID+H+Y
Sbjct: 61  YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HD+YMK KGNVFKNKRVLME IHK KAEK R K L+DQ EA+R K + +R+    RREER
Sbjct: 121 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARK----RREER 178

Query: 181 LA 183
           +A
Sbjct: 181 IA 178

[Close]
BLAST of Cucsa.205460 vs. Swiss-Prot
Match: RL19_PONAB (60S ribosomal protein L19 OS=Pongo abelii GN=RPL19 PE=2 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 5.1e-68
Identity = 125/181 (69.06%), Postives = 151/181 (83.43%), Query Frame = 1 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           M  L+LQKRLA+SVL+CG+ KVWLDPNE NEI+ ANSRQ IRKL+KDG IIRKP  +HSR
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           +R R+   A+RKGRH G GKR+GT  AR+P K+ WMRRMR+LRRLLR+YRESKKID+HMY
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           H +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L+DQ EA+R+K K +R+    RREER
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARK----RREER 177

Query: 181 L 182
           L
Sbjct: 181 L 177

[Close]
BLAST of Cucsa.205460 vs. TrEMBL
Match: W9SA46_9ROSA (Ribosomal protein L19 OS=Morus notabilis GN=L484_007486 PE=3 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 1.7e-107
Identity = 201/213 (94.37%), Postives = 204/213 (95.77%), Query Frame = 1 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRL+ASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRRLLRKYRESKKID+HMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 214
           LAQGPGEK P  T AA PAA SQ TQ SKKSKK
Sbjct: 181 LAQGPGEKLPAATPAAAPAAVSQPTQGSKKSKK 213

[Close]
BLAST of Cucsa.205460 vs. TrEMBL
Match: A0A0B2RAU2_GLYSO (Ribosomal protein L19 OS=Glycine soja GN=glysoja_037702 PE=3 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 4.3e-106
Identity = 201/213 (94.37%), Postives = 203/213 (95.31%), Query Frame = 1 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180

Query: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 214
           LAQGPGE+ PP    A PA ASQ  QASKKSKK
Sbjct: 181 LAQGPGER-PPAAQTATPATASQPPQASKKSKK 212

[Close]
BLAST of Cucsa.205460 vs. TrEMBL
Match: C6SY65_SOYBN (Ribosomal protein L19 OS=Glycine max GN=GLYMA_10G016400 PE=2 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 1.2e-105
Identity = 200/213 (93.90%), Postives = 203/213 (95.31%), Query Frame = 1 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180

Query: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 214
           LAQGPGE+ PP    A PA ASQ  +ASKKSKK
Sbjct: 181 LAQGPGER-PPAAQTATPATASQPPRASKKSKK 212

[Close]
BLAST of Cucsa.205460 vs. TrEMBL
Match: A0A067JW78_JATCU (Ribosomal protein L19 OS=Jatropha curcas GN=JCGZ_13972 PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 1.6e-105
Identity = 200/213 (93.90%), Postives = 205/213 (96.24%), Query Frame = 1 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCG+GKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 214
           LAQGPG ++P    AA PAAASQ T+ SKKSKK
Sbjct: 181 LAQGPGGEKP---VAAPPAAASQPTEGSKKSKK 210

[Close]
BLAST of Cucsa.205460 vs. TrEMBL
Match: A0A0A0KYA0_CUCSA (Ribosomal protein L19 OS=Cucumis sativus GN=Csa_4G001980 PE=3 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 4.7e-105
Identity = 200/213 (93.90%), Postives = 203/213 (95.31%), Query Frame = 1 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 214
           LAQGPGEK     +AA P AASQ+ Q SKK+KK
Sbjct: 181 LAQGPGEK----PAAAAPVAASQAPQVSKKAKK 209

[Close]
BLAST of Cucsa.205460 vs. TAIR10
Match: AT1G02780.1 (AT1G02780.1 Ribosomal protein L19e family protein)

HSP 1 Score: 357.1 bits (915), Expect = 7.7e-99
Identity = 184/215 (85.58%), Postives = 196/215 (91.16%), Query Frame = 1 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASV+KCG+GKVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR+MK AK KGRHSGYGKR+GTREARLPTK+LWMRRMRVLRRLL+KYRE+KKIDKHMY
Sbjct: 61  SRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYM+VKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKQPPVTSAAQPAAASQSTQA--SKKSKK 214
           LA+GPG    PV + A PAA    T A   KKSKK
Sbjct: 181 LAKGPGGDVAPVAAPA-PAATPAPTAAVPKKKSKK 214

[Close]
BLAST of Cucsa.205460 vs. TAIR10
Match: AT3G16780.1 (AT3G16780.1 Ribosomal protein L19e family protein)

HSP 1 Score: 350.9 bits (899), Expect = 5.5e-97
Identity = 177/213 (83.10%), Postives = 188/213 (88.26%), Query Frame = 1 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLK+QKRLAASV+KCG+GKVWLDPNE  +ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR + EAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRR L KYRESKKID+HMY
Sbjct: 61  SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHK KAEKAREKTL+DQFEAKR KNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKNKASRERKFARREER 180

Query: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 214
           LAQGPG  +        PA A Q  + +KK  K
Sbjct: 181 LAQGPGGGE-----TTTPAGAPQQPEVTKKKSK 208

[Close]
BLAST of Cucsa.205460 vs. TAIR10
Match: AT4G02230.1 (AT4G02230.1 Ribosomal protein L19e family protein)

HSP 1 Score: 347.8 bits (891), Expect = 4.7e-96
Identity = 179/213 (84.04%), Postives = 195/213 (91.55%), Query Frame = 1 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLA+SVLKCG+ KVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR++  AKRKGRHSGYGKR+GTREARLPTK+LWMRRMRVLRRLL+KYRE+KKID+HMY
Sbjct: 61  SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 214
           LA+GPG   P   +AA PA  ++    +KKSKK
Sbjct: 181 LAKGPGGDIP---AAAPPAQTAE--VPAKKSKK 208

[Close]
BLAST of Cucsa.205460 vs. TAIR10
Match: AT4G16030.1 (AT4G16030.1 Ribosomal protein L19e family protein)

HSP 1 Score: 92.0 bits (227), Expect = 4.6e-19
Identity = 65/133 (48.87%), Postives = 78/133 (58.65%), Query Frame = 1 

Query: 58  HSRSRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDK 117
           HSRSRARR      K RH+GYGK   T EA         RR+++L+RLL+K+  +KKIDK
Sbjct: 7   HSRSRARR------KCRHTGYGK--DTMEALRRIMKRLTRRLKMLKRLLKKFCWNKKIDK 66

Query: 118 HM-YHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFAR 177
            + YHDM+MKVKG V+KNK VLMES+HKS                       SRERKF+ 
Sbjct: 67  LVYYHDMFMKVKGKVYKNKCVLMESMHKS-----------------------SRERKFSG 108

Query: 178 REERLAQGP-GEK 189
            E RLA  P GEK
Sbjct: 127 SEMRLALEPEGEK 108

[Close]
BLAST of Cucsa.205460 vs. NCBI nr
Match: gi|449436477|ref|XP_004136019.1| (PREDICTED: 60S ribosomal protein L19-1 [Cucumis sativus])

HSP 1 Score: 419.1 bits (1076), Expect = 4.7e-114
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 1 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 214
           LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK
Sbjct: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 213

[Close]
BLAST of Cucsa.205460 vs. NCBI nr
Match: gi|659101337|ref|XP_008451555.1| (PREDICTED: 60S ribosomal protein L19-1-like [Cucumis melo])

HSP 1 Score: 414.8 bits (1065), Expect = 8.9e-113
Identity = 210/213 (98.59%), Postives = 211/213 (99.06%), Query Frame = 1 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRRGTREARLPTK+LWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKVLWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 214
           LAQGPGEKQPPVTSAAQPAA SQSTQASKKSKK
Sbjct: 181 LAQGPGEKQPPVTSAAQPAAVSQSTQASKKSKK 213

[Close]
BLAST of Cucsa.205460 vs. NCBI nr
Match: gi|703125875|ref|XP_010103417.1| (60S ribosomal protein L19-2 [Morus notabilis])

HSP 1 Score: 396.7 bits (1018), Expect = 2.5e-107
Identity = 201/213 (94.37%), Postives = 204/213 (95.77%), Query Frame = 1 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRL+ASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRRLLRKYRESKKID+HMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 214
           LAQGPGEK P  T AA PAA SQ TQ SKKSKK
Sbjct: 181 LAQGPGEKLPAATPAAAPAAVSQPTQGSKKSKK 213

[Close]
BLAST of Cucsa.205460 vs. NCBI nr
Match: gi|502112641|ref|XP_004494396.1| (PREDICTED: 60S ribosomal protein L19-1-like [Cicer arietinum])

HSP 1 Score: 392.9 bits (1008), Expect = 3.6e-106
Identity = 201/213 (94.37%), Postives = 204/213 (95.77%), Query Frame = 1 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLA+SVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLASSVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 214
            AQGPGEK P    AA PAAASQ TQA KK+KK
Sbjct: 181 FAQGPGEK-PAAAPAAPPAAASQPTQAPKKTKK 212

[Close]
BLAST of Cucsa.205460 vs. NCBI nr
Match: gi|734398814|gb|KHN30670.1| (60S ribosomal protein L19-2 [Glycine soja])

HSP 1 Score: 392.1 bits (1006), Expect = 6.2e-106
Identity = 201/213 (94.37%), Postives = 203/213 (95.31%), Query Frame = 1 

Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180

Query: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 214
           LAQGPGE+ PP    A PA ASQ  QASKKSKK
Sbjct: 181 LAQGPGER-PPAAQTATPATASQPPQASKKSKK 212

The following BLAST results are available for this feature:
BLAST of Cucsa.205460 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RL191_ARATH1.4e-9785.5860S ribosomal protein L19-1 OS=Arabidopsis thaliana GN=RPL19A PE=2 SV=1[more]
RL192_ARATH9.8e-9683.1060S ribosomal protein L19-2 OS=Arabidopsis thaliana GN=RPL19B PE=2 SV=1[more]
RL193_ARATH8.3e-9584.0460S ribosomal protein L19-3 OS=Arabidopsis thaliana GN=RPL19C PE=2 SV=3[more]
RL19_DROME1.2e-6970.3360S ribosomal protein L19 OS=Drosophila melanogaster GN=RpL19 PE=1 SV=2[more]
RL19_PONAB5.1e-6869.0660S ribosomal protein L19 OS=Pongo abelii GN=RPL19 PE=2 SV=1[more]
BLAST of Cucsa.205460 vs. TrEMBL
Match NameE-valueIdentityDescription
W9SA46_9ROSA1.7e-10794.37Ribosomal protein L19 OS=Morus notabilis GN=L484_007486 PE=3 SV=1[more]
A0A0B2RAU2_GLYSO4.3e-10694.37Ribosomal protein L19 OS=Glycine soja GN=glysoja_037702 PE=3 SV=1[more]
C6SY65_SOYBN1.2e-10593.90Ribosomal protein L19 OS=Glycine max GN=GLYMA_10G016400 PE=2 SV=1[more]
A0A067JW78_JATCU1.6e-10593.90Ribosomal protein L19 OS=Jatropha curcas GN=JCGZ_13972 PE=3 SV=1[more]
A0A0A0KYA0_CUCSA4.7e-10593.90Ribosomal protein L19 OS=Cucumis sativus GN=Csa_4G001980 PE=3 SV=1[more]
BLAST of Cucsa.205460 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G02780.17.7e-9985.58 Ribosomal protein L19e family protein[more]
AT3G16780.15.5e-9783.10 Ribosomal protein L19e family protein[more]
AT4G02230.14.7e-9684.04 Ribosomal protein L19e family protein[more]
AT4G16030.14.6e-1948.87 Ribosomal protein L19e family protein[more]
BLAST of Cucsa.205460 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449436477|ref|XP_004136019.1|4.7e-114100.00PREDICTED: 60S ribosomal protein L19-1 [Cucumis sativus][more]
gi|659101337|ref|XP_008451555.1|8.9e-11398.59PREDICTED: 60S ribosomal protein L19-1-like [Cucumis melo][more]
gi|703125875|ref|XP_010103417.1|2.5e-10794.3760S ribosomal protein L19-2 [Morus notabilis][more]
gi|502112641|ref|XP_004494396.1|3.6e-10694.37PREDICTED: 60S ribosomal protein L19-1-like [Cicer arietinum][more]
gi|734398814|gb|KHN30670.1|6.2e-10694.3760S ribosomal protein L19-2 [Glycine soja][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000196Ribosomal_L19/L19e
IPR015972Ribosomal_L19/L19e_dom1
IPR015974Ribosomal protein L19/L19e, domain 3
IPR023638Ribosomal_L19/L19e_CS
IPR027547Ribosomal protein L19/L19e
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.205460.1Cucsa.205460.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000196Ribosomal protein L19/L19e domainPFAMPF01280Ribosomal_L19ecoord: 4..146
score: 1.5
IPR000196Ribosomal protein L19/L19e domainSMARTSM01416Ribosomal_L19e_2coord: 3..146
score: 1.2
IPR000196Ribosomal protein L19/L19e domainunknownSSF48140Ribosomal protein L19 (L19e)coord: 3..144
score: 3.4
IPR015972Ribosomal protein L19/L19e, domain 1GENE3DG3DSA:1.10.1650.10coord: 1..56
score: 4.0
IPR015974Ribosomal protein L19/L19e, domain 3GENE3DG3DSA:1.10.1200.60coord: 90..149
score: 6.5
IPR023638Ribosomal protein L19/L19e conserved sitePROSITEPS00526RIBOSOMAL_L19Ecoord: 7..26
scor
IPR027547Ribosomal protein L19/L19eHAMAPMF_01475Ribosomal_L19ecoord: 3..149
score: 20
NoneNo IPR availablePANTHERPTHR1072260S RIBOSOMAL PROTEIN L19coord: 1..213
score: 2.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.205460Cla015087Watermelon (97103) v1cgywmB403
Cucsa.205460Csa7G398150Cucumber (Chinese Long) v2cgycuB312
Cucsa.205460MELO3C015988Melon (DHL92) v3.5.1cgymeB371
Cucsa.205460ClCG09G005680Watermelon (Charleston Gray)cgywcgB379
Cucsa.205460CSPI07G17600Wild cucumber (PI 183967)cgycpiB325
Cucsa.205460CmaCh14G009170Cucurbita maxima (Rimu)cgycmaB0605
Cucsa.205460CmaCh17G010770Cucurbita maxima (Rimu)cgycmaB0606
Cucsa.205460CmaCh01G003010Cucurbita maxima (Rimu)cgycmaB0607
Cucsa.205460CmaCh08G004320Cucurbita maxima (Rimu)cgycmaB0608
Cucsa.205460CmoCh14G009440Cucurbita moschata (Rifu)cgycmoB0607
Cucsa.205460CmoCh01G003130Cucurbita moschata (Rifu)cgycmoB0609
Cucsa.205460CmoCh17G010500Cucurbita moschata (Rifu)cgycmoB0608
Cucsa.205460CmoCh08G004260Cucurbita moschata (Rifu)cgycmoB0610
Cucsa.205460Lsi02G024140Bottle gourd (USVL1VR-Ls)cgylsiB351
Cucsa.205460Cp4.1LG17g07240Cucurbita pepo (Zucchini)cgycpeB0580
Cucsa.205460Cp4.1LG02g16400Cucurbita pepo (Zucchini)cgycpeB0581
Cucsa.205460MELO3C015988.2Melon (DHL92) v3.6.1cgymedB368
Cucsa.205460CsaV3_7G029400Cucumber (Chinese Long) v3cgycucB330
Cucsa.205460Cla97C09G168180Watermelon (97103) v2cgywmbB384
Cucsa.205460Bhi09G000729Wax gourdcgywgoB432
Cucsa.205460Carg07164Silver-seed gourdcarcgyB0132
Cucsa.205460Carg12093Silver-seed gourdcarcgyB0640
Cucsa.205460Carg07395Silver-seed gourdcarcgyB0863
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.205460Watermelon (97103) v2cgywmbB382
Cucsa.205460Watermelon (97103) v2cgywmbB383
Cucsa.205460Wax gourdcgywgoB429
Cucsa.205460Wax gourdcgywgoB430
Cucsa.205460Cucumber (Gy14) v1cgycgyB035
Cucsa.205460Wild cucumber (PI 183967)cgycpiB324
Cucsa.205460Cucumber (Chinese Long) v2cgycuB311
Cucsa.205460Melon (DHL92) v3.5.1cgymeB372
Cucsa.205460Watermelon (Charleston Gray)cgywcgB380
Cucsa.205460Watermelon (Charleston Gray)cgywcgB381
Cucsa.205460Watermelon (97103) v1cgywmB405
Cucsa.205460Watermelon (97103) v1cgywmB402
Cucsa.205460Watermelon (97103) v1cgywmB404
Cucsa.205460Cucurbita pepo (Zucchini)cgycpeB0579
Cucsa.205460Bottle gourd (USVL1VR-Ls)cgylsiB352
Cucsa.205460Melon (DHL92) v3.6.1cgymedB369
Cucsa.205460Silver-seed gourdcarcgyB0932
Cucsa.205460Cucumber (Chinese Long) v3cgycucB329