Carg12343 (gene) Silver-seed gourd

Overview
NameCarg12343
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionMYB transcription factor
LocationCucurbita_argyrosperma_scaffold_074 : 415137 .. 416250 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAAAACCCTTTGTTTTTGCCATTTGTTATGCACATCTACACTCCAATAATACCCTCTTTCCCTCTTGTCCCTATGGCTGGTGTGTCAAATACTGCAGCCCATAGGCCAAGTGAGGAAGAAAGTGAGCTAAGAAGAGGGCCATGGACTGTTGAAGAGGACACATTGTTGATTCATTATATTGCTGCTCATGGTGAAGGCCAATGGAACCTATTGGCTAAACAAGCTGGTATTTATACACACTTGCATTCTCTCGATTCGAAATTCTCTCGTCTCTTCTTCAATCGTTGTCGTTTTTCAGGTCTCAAGAGAACAGGAAAAAGTTGCAGATTGAGATGGCTGAATTATTTAAAACCTGATATTAAACGTGGGAATCTCACTCTTCAAGAACAACTCCTCATCCTCGAACTTCATTCCAAATGGGGTAACAGGTATGTTGACGATCATATTAATTTGATTTACAATCACTTTTTAGAACGTGATTATATAGAATTTGTTTTAAAAGTATCGATATTTGATTGAATCTAAAAAAATTTAAGACATACCCTTATTAGTTTTTGGATATTTGATGTTTTTTTTTTTTTTCTTTTTTGTAGGTGGTCCAAAATTGCACAACAATTACCGGGAAGAACGGATAACGAGATTAAGAACTACTGGAGGACCCGAGTTCAAAAACAGTTACGTCAGCTGAAAGTACAAGCTCACAGCAGGAAACTTTTGGATGCCATTTGTCATTTGAGCATGCTAGAAGCCATGGACCAAACTTCCAATTACTCCATCAATTTGCCTCCATCTCTCCATAACATGAACTTACCAAACTCATCAAATAGTACTGTTCTTCTTCCGGCCAACCATAGCAGCGGAGCTCCTCCTCCGCCACCCCCACGTTCCGTCCAGCAATGGCCTGAAATCTCAACATGGCCACCAAGTCCTTGTGGTGAATTCATGGAAGCTTGGAGGTTTGACATGGTGGAGCAGAAGCAGCTACATGAGCCAGTTGGTGCATTGGGTGATTGGGAAGTTGGTGATCGTGATGCCCAAATGATAGCACCAGATTGGGTGTTGGAGGATGCCATGGTTGAAAACTTGTGGAGCTTGGATCATCACTTGATATAA

mRNA sequence

ATAAAACCCTTTGTTTTTGCCATTTGTTATGCACATCTACACTCCAATAATACCCTCTTTCCCTCTTGTCCCTATGGCTGGTGTGTCAAATACTGCAGCCCATAGGCCAAGTGAGGAAGAAAGTGAGCTAAGAAGAGGGCCATGGACTGTTGAAGAGGACACATTGTTGATTCATTATATTGCTGCTCATGGTGAAGGCCAATGGAACCTATTGGCTAAACAAGCTGGTCTCAAGAGAACAGGAAAAAGTTGCAGATTGAGATGGCTGAATTATTTAAAACCTGATATTAAACGTGGGAATCTCACTCTTCAAGAACAACTCCTCATCCTCGAACTTCATTCCAAATGGGGTAACAGGTGGTCCAAAATTGCACAACAATTACCGGGAAGAACGGATAACGAGATTAAGAACTACTGGAGGACCCGAGTTCAAAAACAGTTACGTCAGCTGAAAGTACAAGCTCACAGCAGGAAACTTTTGGATGCCATTTGTCATTTGAGCATGCTAGAAGCCATGGACCAAACTTCCAATTACTCCATCAATTTGCCTCCATCTCTCCATAACATGAACTTACCAAACTCATCAAATAGTACTGTTCTTCTTCCGGCCAACCATAGCAGCGGAGCTCCTCCTCCGCCACCCCCACGTTCCGTCCAGCAATGGCCTGAAATCTCAACATGGCCACCAAGTCCTTGTGGTGAATTCATGGAAGCTTGGAGGTTTGACATGGTGGAGCAGAAGCAGCTACATGAGCCAGTTGGTGCATTGGGTGATTGGGAAGTTGGTGATCGTGATGCCCAAATGATAGCACCAGATTGGGTGTTGGAGGATGCCATGGTTGAAAACTTGTGGAGCTTGGATCATCACTTGATATAA

Coding sequence (CDS)

ATGCACATCTACACTCCAATAATACCCTCTTTCCCTCTTGTCCCTATGGCTGGTGTGTCAAATACTGCAGCCCATAGGCCAAGTGAGGAAGAAAGTGAGCTAAGAAGAGGGCCATGGACTGTTGAAGAGGACACATTGTTGATTCATTATATTGCTGCTCATGGTGAAGGCCAATGGAACCTATTGGCTAAACAAGCTGGTCTCAAGAGAACAGGAAAAAGTTGCAGATTGAGATGGCTGAATTATTTAAAACCTGATATTAAACGTGGGAATCTCACTCTTCAAGAACAACTCCTCATCCTCGAACTTCATTCCAAATGGGGTAACAGGTGGTCCAAAATTGCACAACAATTACCGGGAAGAACGGATAACGAGATTAAGAACTACTGGAGGACCCGAGTTCAAAAACAGTTACGTCAGCTGAAAGTACAAGCTCACAGCAGGAAACTTTTGGATGCCATTTGTCATTTGAGCATGCTAGAAGCCATGGACCAAACTTCCAATTACTCCATCAATTTGCCTCCATCTCTCCATAACATGAACTTACCAAACTCATCAAATAGTACTGTTCTTCTTCCGGCCAACCATAGCAGCGGAGCTCCTCCTCCGCCACCCCCACGTTCCGTCCAGCAATGGCCTGAAATCTCAACATGGCCACCAAGTCCTTGTGGTGAATTCATGGAAGCTTGGAGGTTTGACATGGTGGAGCAGAAGCAGCTACATGAGCCAGTTGGTGCATTGGGTGATTGGGAAGTTGGTGATCGTGATGCCCAAATGATAGCACCAGATTGGGTGTTGGAGGATGCCATGGTTGAAAACTTGTGGAGCTTGGATCATCACTTGATATAA

Protein sequence

MHIYTPIIPSFPLVPMAGVSNTAAHRPSEEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSCRLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKQLRQLKVQAHSRKLLDAICHLSMLEAMDQTSNYSINLPPSLHNMNLPNSSNSTVLLPANHSSGAPPPPPPRSVQQWPEISTWPPSPCGEFMEAWRFDMVEQKQLHEPVGALGDWEVGDRDAQMIAPDWVLEDAMVENLWSLDHHLI
Homology
[Close]
BLAST of Carg12343 vs. NCBI nr
Match: XP_022998167.1 (transcription factor MYB24-like [Cucurbita maxima])

HSP 1 Score: 492.3 bits (1266), Expect = 1.1e-135
Identity = 256/267 (95.88%), Postives = 262/267 (98.13%), Query Frame = 0 

Query: 16  MAGVSNTAAHRPSEEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSC 75
           MAGVS TA HRPSEEESELRRGPWTVEEDTLLIHYIAAHGEGQWN+LAKQAGLKRTGKSC
Sbjct: 1   MAGVSKTATHRPSEEESELRRGPWTVEEDTLLIHYIAAHGEGQWNILAKQAGLKRTGKSC 60

Query: 76  RLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQ 135
           RLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQ+LPGRTDNEIKNYWRTRVQ
Sbjct: 61  RLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQELPGRTDNEIKNYWRTRVQ 120

Query: 136 KQLRQLKVQAHSRKLLDAICHLSMLEAMDQTSNYSINLPPSLHNMNLPNSXXXXXXXXXX 195
           KQLRQLKVQAHSRKLLDAICHLSMLEAMDQTSNYSINLPPSLHNMNLPNSXXXXXXXXXX
Sbjct: 121 KQLRQLKVQAHSRKLLDAICHLSMLEAMDQTSNYSINLPPSLHNMNLPNSXXXXXXXXXX 180

Query: 196 XXXXXXXXXXXXSVQQWPEISTWPPSPCGEFMEAWRFDMVEQKQLHEPVGALGDWEVGDR 255
           XXXXXXXXXXXXSVQQWPE+S WPPSPCGEF+E+WRFDMVEQKQ HEPVGA+GDWEVGDR
Sbjct: 181 XXXXXXXXXXXXSVQQWPEVSAWPPSPCGEFIESWRFDMVEQKQQHEPVGAVGDWEVGDR 240

Query: 256 DAQMIAPDWVLEDAMVENLWSLDHHLI 283
           DAQMIAPDWVLED MVENLWSLDHHLI
Sbjct: 241 DAQMIAPDWVLEDVMVENLWSLDHHLI 267

[Close]
BLAST of Carg12343 vs. NCBI nr
Match: XP_023523160.1 (transcription factor MYB62-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 491.9 bits (1265), Expect = 1.5e-135
Identity = 251/268 (93.66%), Postives = 253/268 (94.40%), Query Frame = 0 

Query: 16  MAGVSNTAAHRPSEEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSC 75
           MAGVSNTAAHRPSEEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSC
Sbjct: 1   MAGVSNTAAHRPSEEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSC 60

Query: 76  RLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQ 135
           RLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQ+LPGRTDNEIKNYWRTRVQ
Sbjct: 61  RLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQELPGRTDNEIKNYWRTRVQ 120

Query: 136 KQLRQLKVQAHSRKLLDAICHLSMLEAMDQTSNYSINLPPSLHNMNLPN-SXXXXXXXXX 195
           KQLRQLKVQAHSRKLLDAICHLSMLEAMDQTSNYSINLPPSLHNMNLPN S         
Sbjct: 121 KQLRQLKVQAHSRKLLDAICHLSMLEAMDQTSNYSINLPPSLHNMNLPNSSNSTVVLPAN 180

Query: 196 XXXXXXXXXXXXXSVQQWPEISTWPPSPCGEFMEAWRFDMVEQKQLHEPVGALGDWEVGD 255
            XXXXXXXXXXXXSVQQWPE+S WPPSPCGEFMEAWRFDMV QKQ HE VGALGDWEVGD
Sbjct: 181 HXXXXXXXXXXXXSVQQWPEVSAWPPSPCGEFMEAWRFDMVGQKQQHEAVGALGDWEVGD 240

Query: 256 RDAQMIAPDWVLEDAMVENLWSLDHHLI 283
           RDAQMIAPDWVLEDAMVENLWSLDHHLI
Sbjct: 241 RDAQMIAPDWVLEDAMVENLWSLDHHLI 268

[Close]
BLAST of Carg12343 vs. NCBI nr
Match: XP_022949509.1 (transcription factor MYB62-like [Cucurbita moschata])

HSP 1 Score: 490.3 bits (1261), Expect = 4.3e-135
Identity = 260/268 (97.01%), Postives = 262/268 (97.76%), Query Frame = 0 

Query: 16  MAGVSNTAAHRPSEEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSC 75
           MAGVS+TAAHRPSEEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSC
Sbjct: 1   MAGVSSTAAHRPSEEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSC 60

Query: 76  RLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQ 135
           RLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQ
Sbjct: 61  RLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQ 120

Query: 136 KQLRQLKVQAHSRKLLDAICHLSMLEAMDQTSNYSINLPPSLHNMNLPN-SXXXXXXXXX 195
           KQLRQLKVQAHSRKLLDAICHLSMLEAMDQTSNYSINLPPSLHNMNLPN  XXXXXXXXX
Sbjct: 121 KQLRQLKVQAHSRKLLDAICHLSMLEAMDQTSNYSINLPPSLHNMNLPNXXXXXXXXXXX 180

Query: 196 XXXXXXXXXXXXXSVQQWPEISTWPPSPCGEFMEAWRFDMVEQKQLHEPVGALGDWEVGD 255
           XXXXXXXXXXXXX   QWPEIS WPPSPCGEFMEAWRFDMVEQKQLHEPVGALGDWEVGD
Sbjct: 181 XXXXXXXXXXXXXXXXQWPEISAWPPSPCGEFMEAWRFDMVEQKQLHEPVGALGDWEVGD 240

Query: 256 RDAQMIAPDWVLEDAMVENLWSLDHHLI 283
           RDAQMIAPDWVLEDAMVENLWSLDHHL+
Sbjct: 241 RDAQMIAPDWVLEDAMVENLWSLDHHLM 268

[Close]
BLAST of Carg12343 vs. NCBI nr
Match: XP_004151034.2 (PREDICTED: myb-related protein 305-like [Cucumis sativus])

HSP 1 Score: 377.5 bits (968), Expect = 4.0e-101
Identity = 192/277 (69.31%), Postives = 216/277 (77.98%), Query Frame = 0 

Query: 13  LVPMAGVSNTAAH--RPSEEE-SELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLK 72
           ++ MA +S  + +  + SEEE SELRRGPWT+EEDTLLI YIA HGEGQWN+LAKQAGLK
Sbjct: 1   MISMANLSIKSENYKKASEEEISELRRGPWTIEEDTLLIRYIAVHGEGQWNILAKQAGLK 60

Query: 73  RTGKSCRLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNY 132
           RTGKSCRLRWLNYLKPD+KRGNLTLQEQLLILELHSKWGNRWSKIAQ LPGRTDNEIKNY
Sbjct: 61  RTGKSCRLRWLNYLKPDVKRGNLTLQEQLLILELHSKWGNRWSKIAQHLPGRTDNEIKNY 120

Query: 133 WRTRVQKQLRQLKVQAHSRKLLDAICHLSMLEAMDQTSNYSINLPP--SLHNMNLPNSXX 192
           WRTRVQKQLRQLKV+A+S++ LDAI HLSMLEAMDQ+SN+S+N PP  +L N   PNS  
Sbjct: 121 WRTRVQKQLRQLKVEANSKRFLDAIHHLSMLEAMDQSSNFSLNFPPPSALQNTTSPNSFE 180

Query: 193 XXXXXXXXXXXXXXXXXXXXSVQQWPEISTWPPSPCGEFMEAWRFDMVE-QKQLHEPVGA 252
                               SV QWPEIS  PP+ C EF EAWR +MVE QKQ  EPV +
Sbjct: 181 TAIHPFNDHMGDAAPLRVPCSVSQWPEISQPPPNSCDEFEEAWRLNMVEMQKQKQEPVCS 240

Query: 253 LGDWEVGDRDAQMIAPDWVLEDAMVENLWSL-DHHLI 283
           LG WE+ D D  M APDW++ED+MVENLWSL DHHLI
Sbjct: 241 LGAWEIEDCDVHMAAPDWLMEDSMVENLWSLEDHHLI 277

[Close]
BLAST of Carg12343 vs. NCBI nr
Match: XP_008457536.1 (PREDICTED: myb-related protein 305-like [Cucumis melo])

HSP 1 Score: 367.5 bits (942), Expect = 4.2e-98
Identity = 188/277 (67.87%), Postives = 213/277 (76.90%), Query Frame = 0 

Query: 13  LVPMAGVSNTAAHRPS---EEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLK 72
           ++ MA +S  + +  +   EE SELRRGPWT+EEDTLLI YIA HGEGQWN+LAKQAGLK
Sbjct: 1   MISMANLSTKSENYKNANEEEISELRRGPWTIEEDTLLIRYIAGHGEGQWNILAKQAGLK 60

Query: 73  RTGKSCRLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNY 132
           RTGKSCRLRWLNYLKPD+KRGNLTLQEQLLILELHSKWGNRWSKIAQ LPGRTDNEIKNY
Sbjct: 61  RTGKSCRLRWLNYLKPDVKRGNLTLQEQLLILELHSKWGNRWSKIAQHLPGRTDNEIKNY 120

Query: 133 WRTRVQKQLRQLKVQAHSRKLLDAICHLSMLEAMDQTSNYSINLPP--SLHNMNLPNSXX 192
           WRTRVQKQLRQLKV+A+S++ LDAI HLSMLEAMDQ+SN+S+N PP  +L N   PNS  
Sbjct: 121 WRTRVQKQLRQLKVEANSKRFLDAIHHLSMLEAMDQSSNFSLNFPPPSALQNTTSPNS-F 180

Query: 193 XXXXXXXXXXXXXXXXXXXXSVQQWPEISTWPPSPCGEFMEAWRFDMVE-QKQLHEPVGA 252
                               S  QWP+IS  PPS CGEF EAWR +MVE QKQ  EPV +
Sbjct: 181 ETAIHPFNDHGGGAPLRAPCSASQWPDISQPPPSSCGEFGEAWRLNMVEMQKQKQEPVCS 240

Query: 253 LGDWEVGDRDAQMIAPDWVLEDAMVENLWSL-DHHLI 283
           LG WE+ D D  M APDW++ED+MVENLWSL D +LI
Sbjct: 241 LGAWEIEDCDVPMAAPDWLMEDSMVENLWSLEDQNLI 276

[Close]
BLAST of Carg12343 vs. TAIR10
Match: AT1G68320.1 (myb domain protein 62)

HSP 1 Score: 214.5 bits (545), Expect = 8.2e-56
Identity = 100/125 (80.00%), Postives = 112/125 (89.60%), Query Frame = 0 

Query: 30  EESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSCRLRWLNYLKPDIKR 89
           E+ ELRRGPWT+EEDTLL +YI  +GEG+WN +AK AGLKRTGKSCRLRWLNYLKPDI+R
Sbjct: 15  EDEELRRGPWTLEEDTLLTNYILHNGEGRWNHVAKCAGLKRTGKSCRLRWLNYLKPDIRR 74

Query: 90  GNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKQLRQLKVQAHSRK 149
           GNLT QEQLLILELHSKWGNRWSKIAQ LPGRTDNEIKNYWRTRVQKQ RQL ++++S K
Sbjct: 75  GNLTPQEQLLILELHSKWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQARQLNIESNSDK 134

Query: 150 LLDAI 155
             DA+
Sbjct: 135 FFDAV 139

[Close]
BLAST of Carg12343 vs. TAIR10
Match: AT1G25340.1 (myb domain protein 116)

HSP 1 Score: 209.5 bits (532), Expect = 2.6e-54
Identity = 100/156 (64.10%), Postives = 123/156 (78.85%), Query Frame = 0 

Query: 28  SEEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSCRLRWLNYLKPDI 87
           +EE +E R+GPWT+EEDTLL +YI+ +GEG+WNLLAK +GLKR GKSCRLRWLNYLKPDI
Sbjct: 12  NEEGAEQRKGPWTLEEDTLLTNYISHNGEGRWNLLAKSSGLKRAGKSCRLRWLNYLKPDI 71

Query: 88  KRGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKQLRQLKVQAHS 147
           KRGNLT QEQLLILELHSKWGNRWSKI++ LPGRTDN+IKNYWRTRVQKQ RQL + ++S
Sbjct: 72  KRGNLTPQEQLLILELHSKWGNRWSKISKYLPGRTDNDIKNYWRTRVQKQARQLNIDSNS 131

Query: 148 RKLLDAICH------LSMLEAMDQTSNYSINLPPSL 178
            K ++ +        ++ ++    T+N   N P  L
Sbjct: 132 HKFIEVVRSFWFPRLINEIKDNSYTNNIKANAPDLL 167

[Close]
BLAST of Carg12343 vs. TAIR10
Match: AT1G48000.1 (myb domain protein 112)

HSP 1 Score: 201.8 bits (512), Expect = 5.5e-52
Identity = 91/129 (70.54%), Postives = 108/129 (83.72%), Query Frame = 0 

Query: 31  ESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSCRLRWLNYLKPDIKRG 90
           E E+RRGPWTVEED  L+ YI+ HGEG+WN L++ AGL RTGKSCRLRWLNYL+PDI+RG
Sbjct: 29  EIEIRRGPWTVEEDMKLVSYISLHGEGRWNSLSRSAGLNRTGKSCRLRWLNYLRPDIRRG 88

Query: 91  NLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKQLRQLKVQAHSRKL 150
           +++LQEQ +ILELHS+WGNRWSKIAQ LPGRTDNEIKNYWRTRVQK  + LK   +S++ 
Sbjct: 89  DISLQEQFIILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKLLKCDVNSKQF 148

Query: 151 LDAICHLSM 160
            D I HL M
Sbjct: 149 KDTIKHLWM 157

[Close]
BLAST of Carg12343 vs. TAIR10
Match: AT3G06490.1 (myb domain protein 108)

HSP 1 Score: 201.8 bits (512), Expect = 5.5e-52
Identity = 91/131 (69.47%), Postives = 113/131 (86.26%), Query Frame = 0 

Query: 29  EEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSCRLRWLNYLKPDIK 88
           E+E +L+RGPWT EED  L++YIA +GEG+WN L++ AGL+RTGKSCRLRWLNYL+PD++
Sbjct: 14  EDEMDLKRGPWTAEEDFKLMNYIATNGEGRWNSLSRCAGLQRTGKSCRLRWLNYLRPDVR 73

Query: 89  RGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKQLRQLKVQAHSR 148
           RGN+TL+EQLLILELHS+WGNRWSKIAQ LPGRTDNEIKNYWRTRVQK  +QLK   +S+
Sbjct: 74  RGNITLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSQ 133

Query: 149 KLLDAICHLSM 160
           +  D + +L M
Sbjct: 134 QFKDTMKYLWM 144

[Close]
BLAST of Carg12343 vs. TAIR10
Match: AT5G49620.2 (myb domain protein 78)

HSP 1 Score: 198.7 bits (504), Expect = 4.6e-51
Identity = 97/157 (61.78%), Postives = 119/157 (75.80%), Query Frame = 0 

Query: 29  EEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSCRLRWLNYLKPDIK 88
           EEE ++RRGPWTVEED  LI+YIA+HGEG+WN LA+ A LKRTGKSCRLRWLNYL+PD++
Sbjct: 21  EEEMDVRRGPWTVEEDLELINYIASHGEGRWNSLARCAELKRTGKSCRLRWLNYLRPDVR 80

Query: 89  RGNLTLQEQLLILELHSKWGN--------------RWSKIAQQLPGRTDNEIKNYWRTRV 148
           RGN+TL+EQLLILELH++WGN              RWSKIAQ LPGRTDNEIKNYWRTRV
Sbjct: 81  RGNITLEEQLLILELHTRWGNSNEFDHKFSSSCEDRWSKIAQYLPGRTDNEIKNYWRTRV 140

Query: 149 QKQLRQLKVQAHSRKLLDAICHLSMLEAMDQTSNYSI 172
           QK  +QLK   +S++  D + +L M   +++    SI
Sbjct: 141 QKHAKQLKCDVNSQQFKDTMKYLWMPRLVERIQAASI 177

[Close]
BLAST of Carg12343 vs. Swiss-Prot
Match: sp|Q9C9G7|MYB62_ARATH (Transcription factor MYB62 OS=Arabidopsis thaliana OX=3702 GN=MYB62 PE=2 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.5e-54
Identity = 100/125 (80.00%), Postives = 112/125 (89.60%), Query Frame = 0 

Query: 30  EESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSCRLRWLNYLKPDIKR 89
           E+ ELRRGPWT+EEDTLL +YI  +GEG+WN +AK AGLKRTGKSCRLRWLNYLKPDI+R
Sbjct: 15  EDEELRRGPWTLEEDTLLTNYILHNGEGRWNHVAKCAGLKRTGKSCRLRWLNYLKPDIRR 74

Query: 90  GNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKQLRQLKVQAHSRK 149
           GNLT QEQLLILELHSKWGNRWSKIAQ LPGRTDNEIKNYWRTRVQKQ RQL ++++S K
Sbjct: 75  GNLTPQEQLLILELHSKWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQARQLNIESNSDK 134

Query: 150 LLDAI 155
             DA+
Sbjct: 135 FFDAV 139

[Close]
BLAST of Carg12343 vs. Swiss-Prot
Match: sp|Q10MB4|MYB2_ORYSJ (Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 7.3e-54
Identity = 100/135 (74.07%), Postives = 116/135 (85.93%), Query Frame = 0 

Query: 28  SEEE---SELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSCRLRWLNYLK 87
           SEEE    +LRRGPWTVEED LL++YIAAHGEG+WN LA+ AGLKRTGKSCRLRWLNYL+
Sbjct: 11  SEEEVMGGDLRRGPWTVEEDLLLVNYIAAHGEGRWNSLARSAGLKRTGKSCRLRWLNYLR 70

Query: 88  PDIKRGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKQLRQLKVQ 147
           PD++RGN+T QEQLLILELHS+WGNRWSKIAQ LPGRTDNEIKNYWRTRVQK  +QLK  
Sbjct: 71  PDLRRGNITPQEQLLILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKQLKCD 130

Query: 148 AHSRKLLDAICHLSM 160
            +S++  D + +L M
Sbjct: 131 VNSQQFKDVMRYLWM 145

[Close]
BLAST of Carg12343 vs. Swiss-Prot
Match: sp|Q9FGY3|MYB78_ARATH (Transcription factor MYB78 OS=Arabidopsis thaliana OX=3702 GN=MYB78 PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.1e-52
Identity = 97/143 (67.83%), Postives = 119/143 (83.22%), Query Frame = 0 

Query: 29  EEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSCRLRWLNYLKPDIK 88
           EEE ++RRGPWTVEED  LI+YIA+HGEG+WN LA+ A LKRTGKSCRLRWLNYL+PD++
Sbjct: 21  EEEMDVRRGPWTVEEDLELINYIASHGEGRWNSLARCAELKRTGKSCRLRWLNYLRPDVR 80

Query: 89  RGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKQLRQLKVQAHSR 148
           RGN+TL+EQLLILELH++WGNRWSKIAQ LPGRTDNEIKNYWRTRVQK  +QLK   +S+
Sbjct: 81  RGNITLEEQLLILELHTRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSQ 140

Query: 149 KLLDAICHLSMLEAMDQTSNYSI 172
           +  D + +L M   +++    SI
Sbjct: 141 QFKDTMKYLWMPRLVERIQAASI 163

[Close]
BLAST of Carg12343 vs. Swiss-Prot
Match: sp|Q2QZJ8|JAMYB_ORYSJ (Transcription factor JAMYB OS=Oryza sativa subsp. japonica OX=39947 GN=JAMYB PE=2 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.4e-52
Identity = 103/168 (61.31%), Postives = 124/168 (73.81%), Query Frame = 0 

Query: 15  PMAGVSNTAAHRPSEEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKS 74
           P+ G    AA   S   +ELRRGPWTV+ED  LI+YI+ HGEG+WN LA+ AGLKRTGKS
Sbjct: 12  PVPGEQQEAAAELS--SAELRRGPWTVDEDLTLINYISDHGEGRWNALARAAGLKRTGKS 71

Query: 75  CRLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRV 134
           CRLRWLNYL+PD+KRGN T +EQLLIL+LHS+WGNRWSKIAQ LPGRTDNEIKNYWRTRV
Sbjct: 72  CRLRWLNYLRPDVKRGNFTAEEQLLILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRV 131

Query: 135 QKQLRQLKVQAHSRKLLDAICHLSM----------LEAMDQTSNYSIN 173
           QK  +QL    +S++  DA+ +L M            A+D + +YS N
Sbjct: 132 QKHAKQLNCDVNSKRFKDAMKYLWMPRLAERIHARAGAVDDSGDYSNN 177

[Close]
BLAST of Carg12343 vs. Swiss-Prot
Match: sp|Q9LDE1|MY108_ARATH (Transcription factor MYB108 OS=Arabidopsis thaliana OX=3702 GN=MYB108 PE=1 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 9.9e-51
Identity = 91/131 (69.47%), Postives = 113/131 (86.26%), Query Frame = 0 

Query: 29  EEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSCRLRWLNYLKPDIK 88
           E+E +L+RGPWT EED  L++YIA +GEG+WN L++ AGL+RTGKSCRLRWLNYL+PD++
Sbjct: 14  EDEMDLKRGPWTAEEDFKLMNYIATNGEGRWNSLSRCAGLQRTGKSCRLRWLNYLRPDVR 73

Query: 89  RGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKQLRQLKVQAHSR 148
           RGN+TL+EQLLILELHS+WGNRWSKIAQ LPGRTDNEIKNYWRTRVQK  +QLK   +S+
Sbjct: 74  RGNITLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSQ 133

Query: 149 KLLDAICHLSM 160
           +  D + +L M
Sbjct: 134 QFKDTMKYLWM 144

[Close]
BLAST of Carg12343 vs. TrEMBL
Match: tr|A0A1S3C718|A0A1S3C718_CUCME (myb-related protein 305-like OS=Cucumis melo OX=3656 GN=LOC103497203 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 2.8e-98
Identity = 188/277 (67.87%), Postives = 213/277 (76.90%), Query Frame = 0 

Query: 13  LVPMAGVSNTAAHRPS---EEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLK 72
           ++ MA +S  + +  +   EE SELRRGPWT+EEDTLLI YIA HGEGQWN+LAKQAGLK
Sbjct: 1   MISMANLSTKSENYKNANEEEISELRRGPWTIEEDTLLIRYIAGHGEGQWNILAKQAGLK 60

Query: 73  RTGKSCRLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNY 132
           RTGKSCRLRWLNYLKPD+KRGNLTLQEQLLILELHSKWGNRWSKIAQ LPGRTDNEIKNY
Sbjct: 61  RTGKSCRLRWLNYLKPDVKRGNLTLQEQLLILELHSKWGNRWSKIAQHLPGRTDNEIKNY 120

Query: 133 WRTRVQKQLRQLKVQAHSRKLLDAICHLSMLEAMDQTSNYSINLPP--SLHNMNLPNSXX 192
           WRTRVQKQLRQLKV+A+S++ LDAI HLSMLEAMDQ+SN+S+N PP  +L N   PNS  
Sbjct: 121 WRTRVQKQLRQLKVEANSKRFLDAIHHLSMLEAMDQSSNFSLNFPPPSALQNTTSPNS-F 180

Query: 193 XXXXXXXXXXXXXXXXXXXXSVQQWPEISTWPPSPCGEFMEAWRFDMVE-QKQLHEPVGA 252
                               S  QWP+IS  PPS CGEF EAWR +MVE QKQ  EPV +
Sbjct: 181 ETAIHPFNDHGGGAPLRAPCSASQWPDISQPPPSSCGEFGEAWRLNMVEMQKQKQEPVCS 240

Query: 253 LGDWEVGDRDAQMIAPDWVLEDAMVENLWSL-DHHLI 283
           LG WE+ D D  M APDW++ED+MVENLWSL D +LI
Sbjct: 241 LGAWEIEDCDVPMAAPDWLMEDSMVENLWSLEDQNLI 276

[Close]
BLAST of Carg12343 vs. TrEMBL
Match: tr|D6PT03|D6PT03_ROSRU (Putative MYB transcription factor OS=Rosa rugosa OX=74645 GN=MYB4 PE=2 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 8.4e-63
Identity = 138/296 (46.62%), Postives = 181/296 (61.15%), Query Frame = 0 

Query: 16  MAGVSNTAAHRPSEEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSC 75
           MAGV+++    P+EEE+E+R+GPWT++EDTLLIHYIA HGEG WN LAK AGLKRTGKSC
Sbjct: 1   MAGVADSEYTSPNEEENEMRKGPWTLDEDTLLIHYIANHGEGHWNALAKCAGLKRTGKSC 60

Query: 76  RLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQ 135
           RLRWLNYLKPDIKRGNLT QEQLLILELH+KWGNRWSKIAQ LPGRTDNEIKNYWRTRVQ
Sbjct: 61  RLRWLNYLKPDIKRGNLTPQEQLLILELHAKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQ 120

Query: 136 KQLRQLKVQAHSRKLLDAI-CHL--SMLEAMDQTSNYSINLP-----------------P 195
           KQ RQL ++++S++ LDA+ C    ++ + M+QTS+ S++ P                 P
Sbjct: 121 KQARQLNIESNSKRFLDAVRCFWMPTLRQKMEQTSSLSLDPPSSSSSHSNYLTSQISIAP 180

Query: 196 SL----HNMNLPNSXXXXXXXXXXXXXXXXXXXXXXS-------VQQWPEISTWPPSPCG 255
           SL       ++P+S                      +       + Q P+I+  P S   
Sbjct: 181 SLSTSPQTCSVPSSPPSKVVSHVSDYSPIGTSSPSHNSLSSDSLISQLPQITEQPASSSY 240

Query: 256 EF---MEAWRFDMVEQKQLHEPVGALGDWEVGDRDAQMIAPDWVLEDAMVENLWSL 278
            F    + +  D   +    +PV  +  ++    D QM   DW+  + M + LW++
Sbjct: 241 AFEALNDNYYVDYDMEGFSLDPVSEMATFDTSQFDCQMAESDWIPSNYMTDTLWNM 296

[Close]
BLAST of Carg12343 vs. TrEMBL
Match: tr|A0A2P6R1M6|A0A2P6R1M6_ROSCH (Putative transcription factor MYB-HB-like family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0434891 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 7.1e-62
Identity = 138/296 (46.62%), Postives = 179/296 (60.47%), Query Frame = 0 

Query: 16  MAGVSNTAAHRPSEEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSC 75
           MAGV+N+    P+EEE+E+R+GPWT++EDTLLIHYIA HGEG WN LAK AGLKRTGKSC
Sbjct: 1   MAGVANSVYTCPNEEENEMRKGPWTLDEDTLLIHYIANHGEGHWNALAKCAGLKRTGKSC 60

Query: 76  RLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQ 135
           RLRWLNYLKPDIKRGNLT QEQLLILELH+KWGNRWSKIAQ LPGRTDNEIKNYWRTRVQ
Sbjct: 61  RLRWLNYLKPDIKRGNLTPQEQLLILELHAKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQ 120

Query: 136 KQLRQLKVQAHSRKLLDAI-CHL--SMLEAMDQTSNYSINLP-----------------P 195
           KQ RQL +++ S++ LDA+ C    ++ + M+QTS+ S++ P                 P
Sbjct: 121 KQARQLNIESDSKRFLDAVRCFWMPTLRQKMEQTSSLSLDPPSSSSSHSNYLTSQISIAP 180

Query: 196 SL----HNMNLPNSXXXXXXXXXXXXXXXXXXXXXXS-------VQQWPEISTWPPSPCG 255
           SL       ++P+S                      +       + Q P+I+  P S   
Sbjct: 181 SLSTSTQTCSVPSSPPSKVVSHVSDYSPIGTSSPSHNSLSSDSLISQLPQITEQPASSSY 240

Query: 256 EF---MEAWRFDMVEQKQLHEPVGALGDWEVGDRDAQMIAPDWVLEDAMVENLWSL 278
            F    + +  D   +    +PV  +  ++    D QM    W+  + M + LW++
Sbjct: 241 AFEALNDNYYMDYDMEGFSLDPVSEMVSFDTSQFDCQMAESYWIPSNYMTDTLWNM 296

[Close]
BLAST of Carg12343 vs. TrEMBL
Match: tr|A0A0A0KC91|A0A0A0KC91_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G040640 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 7.1e-62
Identity = 142/266 (53.38%), Postives = 164/266 (61.65%), Query Frame = 0 

Query: 31  ESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSCRLRWLNYLKPDIKRG 90
           E+E+RRGPWT++EDTLL HYIA HGEG WN LAK AGLKRTGKSCRLRWLNYLKPDIKRG
Sbjct: 23  ENEVRRGPWTIDEDTLLTHYIACHGEGHWNNLAKYAGLKRTGKSCRLRWLNYLKPDIKRG 82

Query: 91  NLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKQLRQLKVQAHSRKL 150
           N T QEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRV+KQ +QL ++++S+K 
Sbjct: 83  NFTPQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVEKQAKQLNIESNSKKF 142

Query: 151 LDAICHL---SMLEAMDQ------TSNYSINLPPSLHNMNLPNSXXXXXXXXXXXXXXXX 210
           L+ +  L    +L+ MDQ      +SNYS   PPSL      NS                
Sbjct: 143 LETVRDLWIPRLLQKMDQKSSSPNSSNYS--PPPSLEETFYQNS-CGSSSSEATIEAKQT 202

Query: 211 XXXXXXSVQQWPEISTWPPSPCGEFMEA--------WRFDMVEQK--QLHEPVGALGDWE 270
                    QWPE S       G   +           F  V+Q   QL  P   LG   
Sbjct: 203 SIQSCGGYYQWPESSERASEEFGNNSDVQPLNNNNNGEFLHVDQLQIQLQHPFSLLGATC 262

Query: 271 VG-DRDAQMIAPDWVLEDAMVENLWS 277
            G + D QM A DWVL+D   E+LW+
Sbjct: 263 GGAEFDGQMAASDWVLQDDKSESLWN 285

[Close]
BLAST of Carg12343 vs. TrEMBL
Match: tr|M5XYM8|M5XYM8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G313300 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.6e-61
Identity = 149/309 (48.22%), Postives = 183/309 (59.22%), Query Frame = 0 

Query: 16  MAGVSNTAAHRPSEEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSC 75
           MA V+ +A + P+EEE ELRRGPWT+EEDTLLIHYIA+HGEG WN LAK AGLKRTGKSC
Sbjct: 1   MAAVTKSACN-PNEEEIELRRGPWTLEEDTLLIHYIASHGEGHWNSLAKCAGLKRTGKSC 60

Query: 76  RLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQ 135
           RLRWLNYLKPDIKRGNLT QEQL+ILELHSKWGNRWSKIAQ LPGRTDNEIKNYWRTRVQ
Sbjct: 61  RLRWLNYLKPDIKRGNLTPQEQLMILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQ 120

Query: 136 KQLRQLKVQAHSRKLLDAI-CHL--SMLEAMDQTSNYSINLPPSLHNMN----------- 195
           KQ RQL ++++S++ LDA+ C    ++L+ M+Q+S  S  LP +L + N           
Sbjct: 121 KQARQLNIESNSKRFLDAVRCFWMPTLLQKMEQSS--SSYLPTTLSSQNSASPSLSXXXX 180

Query: 196 -----LPNSXXXXXXXXXXXXXXXXXXXXXXS--------VQQWPEISTWPPSPCGEF-- 255
                LP S                               + Q P+ S    SP   F  
Sbjct: 181 XXSISLPTSPPSKVSQIFDHPINGNSSSVTSPSIFSSDSLISQLPQTSERLTSPTHAFDH 240

Query: 256 -----------------MEAWRFDMVEQKQLHEPVGALGDWEVGDRDAQMIAPDWVLEDA 279
                               + +DM E   L +P  A+ D++    D QM A DW+L D 
Sbjct: 241 TVYSSSPALNDCYYVDTSSGYAYDM-EGPNL-DPASAICDFDNQQFDCQMTAGDWML-DN 300

The following BLAST results are available for this feature:
BLAST of Carg12343 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022998167.11.1e-13595.88transcription factor MYB24-like [Cucurbita maxima][more]
XP_023523160.11.5e-13593.66transcription factor MYB62-like [Cucurbita pepo subsp. pepo][more]
XP_022949509.14.3e-13597.01transcription factor MYB62-like [Cucurbita moschata][more]
XP_004151034.24.0e-10169.31PREDICTED: myb-related protein 305-like [Cucumis sativus][more]
XP_008457536.14.2e-9867.87PREDICTED: myb-related protein 305-like [Cucumis melo][more]
BLAST of Carg12343 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G68320.18.2e-5680.00myb domain protein 62[more]
AT1G25340.12.6e-5464.10myb domain protein 116[more]
AT1G48000.15.5e-5270.54myb domain protein 112[more]
AT3G06490.15.5e-5269.47myb domain protein 108[more]
AT5G49620.24.6e-5161.78myb domain protein 78[more]
BLAST of Carg12343 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9C9G7|MYB62_ARATH1.5e-5480.00Transcription factor MYB62 OS=Arabidopsis thaliana OX=3702 GN=MYB62 PE=2 SV=1[more]
sp|Q10MB4|MYB2_ORYSJ7.3e-5474.07Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 ... [more]
sp|Q9FGY3|MYB78_ARATH1.1e-5267.83Transcription factor MYB78 OS=Arabidopsis thaliana OX=3702 GN=MYB78 PE=2 SV=1[more]
sp|Q2QZJ8|JAMYB_ORYSJ1.4e-5261.31Transcription factor JAMYB OS=Oryza sativa subsp. japonica OX=39947 GN=JAMYB PE=... [more]
sp|Q9LDE1|MY108_ARATH9.9e-5169.47Transcription factor MYB108 OS=Arabidopsis thaliana OX=3702 GN=MYB108 PE=1 SV=1[more]
BLAST of Carg12343 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C718|A0A1S3C718_CUCME2.8e-9867.87myb-related protein 305-like OS=Cucumis melo OX=3656 GN=LOC103497203 PE=4 SV=1[more]
tr|D6PT03|D6PT03_ROSRU8.4e-6346.62Putative MYB transcription factor OS=Rosa rugosa OX=74645 GN=MYB4 PE=2 SV=1[more]
tr|A0A2P6R1M6|A0A2P6R1M6_ROSCH7.1e-6246.62Putative transcription factor MYB-HB-like family OS=Rosa chinensis OX=74649 GN=R... [more]
tr|A0A0A0KC91|A0A0A0KC91_CUCSA7.1e-6253.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G040640 PE=4 SV=1[more]
tr|M5XYM8|M5XYM8_PRUPE1.6e-6148.22Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G313300 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf
IPR017930Myb_dom
IPR001005SANT/Myb
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg12343-RACarg12343-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 88..136
e-value: 1.4E-13
score: 61.1
coord: 35..85
e-value: 6.5E-16
score: 68.9
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 36..83
e-value: 5.4E-17
score: 61.6
coord: 89..132
e-value: 3.4E-14
score: 52.6
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 104..132
e-value: 1.19545E-6
score: 43.7182
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 38..83
e-value: 1.94938E-11
score: 56.815
NoneNo IPR availableGENE3DG3DSA:1.10.10.60coord: 33..89
e-value: 2.5E-19
score: 70.9
NoneNo IPR availableGENE3DG3DSA:1.10.10.60coord: 92..152
e-value: 8.4E-17
score: 63.0
NoneNo IPR availablePANTHERPTHR10641:SF510MYB TRANSCRIPTION FACTORcoord: 24..183
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 24..183
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 31..87
score: 24.889
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 88..138
score: 19.578
IPR009057Homeobox-like domain superfamilySUPERFAMILYSSF46689Homeodomain-likecoord: 34..130

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg12343Cla008278Watermelon (97103) v1carwmB0440
Carg12343Csa1G488740Cucumber (Chinese Long) v2carcuB0471
Carg12343MELO3C020699Melon (DHL92) v3.5.1carmeB0449
Carg12343ClCG03G001860Watermelon (Charleston Gray)carwcgB0436
Carg12343CSPI01G22520Wild cucumber (PI 183967)carcpiB0476
Carg12343Cucsa.213510Cucumber (Gy14) v1carcgyB0512
Carg12343CmaCh01G005710Cucurbita maxima (Rimu)carcmaB0613
Carg12343Lsi02G013890Bottle gourd (USVL1VR-Ls)carlsiB403
Carg12343Cp4.1LG02g13220Cucurbita pepo (Zucchini)carcpeB0622
Carg12343CsGy1G022100Cucumber (Gy14) v2carcgybB0448
Carg12343MELO3C020699.2Melon (DHL92) v3.6.1carmedB0451
Carg12343CsaV3_1G033700Cucumber (Chinese Long) v3carcucB0472
Carg12343Cla97C03G052870Watermelon (97103) v2carwmbB0467
Carg12343Bhi08G000338Wax gourdcarwgoB0533
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg12343Silver-seed gourdcarcarB332
Carg12343Silver-seed gourdcarcarB333
Carg12343Silver-seed gourdcarcarB353
Carg12343Silver-seed gourdcarcarB354
Carg12343Silver-seed gourdcarcarB447
Carg12343Cucumber (Gy14) v2carcgybB0452
Carg12343Cucumber (Gy14) v2carcgybB0454
Carg12343Cucurbita maxima (Rimu)carcmaB0610
Carg12343Cucurbita maxima (Rimu)carcmaB0614
Carg12343Cucurbita maxima (Rimu)carcmaB0615
Carg12343Cucurbita maxima (Rimu)carcmaB0616
Carg12343Cucurbita moschata (Rifu)carcmoB0594
Carg12343Cucurbita moschata (Rifu)carcmoB0596
Carg12343Cucurbita moschata (Rifu)carcmoB0597
Carg12343Cucurbita moschata (Rifu)carcmoB0598
Carg12343Cucurbita moschata (Rifu)carcmoB0599
Carg12343Cucurbita pepo (Zucchini)carcpeB0617
Carg12343Cucurbita pepo (Zucchini)carcpeB0618
Carg12343Cucurbita pepo (Zucchini)carcpeB0619
Carg12343Cucurbita pepo (Zucchini)carcpeB0620
Carg12343Cucurbita pepo (Zucchini)carcpeB0624
Carg12343Cucurbita pepo (Zucchini)carcpeB0625
Carg12343Wild cucumber (PI 183967)carcpiB0480
Carg12343Cucumber (Chinese Long) v2carcuB0476
Carg12343Cucumber (Chinese Long) v3carcucB0478
Carg12343Melon (DHL92) v3.5.1carmeB0446
Carg12343Bottle gourd (USVL1VR-Ls)carlsiB400
Carg12343Bottle gourd (USVL1VR-Ls)carlsiB401
Carg12343Bottle gourd (USVL1VR-Ls)carlsiB405
Carg12343Melon (DHL92) v3.5.1carmeB0448
Carg12343Melon (DHL92) v3.6.1carmedB0448
Carg12343Melon (DHL92) v3.6.1carmedB0450
Carg12343Watermelon (Charleston Gray)carwcgB0433
Carg12343Watermelon (Charleston Gray)carwcgB0435
Carg12343Watermelon (97103) v1carwmB0441
Carg12343Watermelon (97103) v1carwmB0442
Carg12343Watermelon (97103) v1carwmB0444
Carg12343Watermelon (97103) v2carwmbB0464
Carg12343Wax gourdcarwgoB0529
Carg12343Wax gourdcarwgoB0530