CsGy1G022100 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G022100
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Transcription factor
Location	Chr1 : 20889775 .. 20891304 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCTCTAATGGCTTTTATTTAGATGTTTTCTCATTCTTTTCCCTCTATAAAATCCTTTGCTATTCCATTTGTTTATTTTCACATATCTCTCAACAATAATATCTATTTATAATATCCTCTTTCTCTTTATAGATTTTATGATCTCTATGGCAAATTTGTCAATTAAAAGTGAAAATTATAAAAAGGCAAGAGAGGAAGAGATTAGTGAACTAAGGAGAGGGCCATGGACTATTGAAGAAGACACATTGTTGATTCGTTATATTGCTGTTCATGGAGAAGGCCAATGGAATATATTGGCTAAACAAGCTGGTATTTTCCTCAACCCTTCTATTTTCCCTTTAATTTTACTTATGTTTTATCCTTTCTTTTTTTTCAAACATTTGTTGTTTTAGGTCTCAAGAGAACAGGAAAAAGTTGTCGACTCAGATGGTTGAATTACTTGAAACCCGACGTTAAGCGTGGGAACCTCACTCTTCAAGAACAACTCCTCATCCTCGAACTCCACTCCAAGTGGGGTAATAGGTATATATTTCCATGATACATGTATGAACATGTTTGAATGTGATTTTGAAAATGGTTAAAAACAATTTTTTATATAAAAAAAATGGCATGAAACATGGTTTAATATCTCAAAATTGATTTTTTTTCATGTGTTTATTATTGTAAACCATGATTAAAAATGAAAATTAAAAGTCAACTGAATAATTAAGAATTTTAGAGAATAAAAACAAATACATTTACAAAAAAAATTAGCACTTAGACAAAATATATGTTTAATAATTGACTTTTTAAGTGTTTAAAAATGTGCGTTCAAAATAAATGTTTATATAAAATCACTATTGTTATTATAAAAATAATTTTGAAACATGTCACTATTGAAAATCGATTTAATATTTGATTTGACAATTTCAAATGCAACTGTATATCATTTAAAAATAGATCATCTTAAAATGCTTGAAAACATGTTTCAAAGTAATTTTGAATAAGACAAAAATGTGATTCTAACATTTTTAACATTTTCAAAACCACTTCCAAACATACAAAACACAACACAGGGAGAGTTTAGTTTGAAAAGCAATTCTAGTAAATGTGCTTTCTCTTAATAACACTTCTTTCCAAAAAGTCAATTTCAAACTCATTTCCAATGATTCGCAGGTGGTCAAAAATTGCACAACATCTACCCGGAAGAACGGATAACGAAATCAAGAACTATTGGAGGACAAGAGTTCAAAAACAGTTACGCCAACTTAAAGTTGAGGCAAACAGCAAGAGATTTTTGGATGCAATTCATCATTTGAGTATGCTAGAAGCCATGGACCAATCCTCTAACTTCTCCCTCAATTTTCCTCCTCCATCAGCTCTTCAAAACACAACATCACCGAACTCGTTTGAAACTGCCATTCATCCGTTCAACGACCACATGGGTGATGCCGCTCCTCTTCGGGTGCCATGTTCAGTCAGCCAATGGCCTGAAATCTCACAACCCCACCAAATTCTTGTGGTGAATTTGAGGAAGCTTGGAGGTTGA

mRNA sequence

CTCTCTCTAATGGCTTTTATTTAGATGTTTTCTCATTCTTTTCCCTCTATAAAATCCTTTGCTATTCCATTTGTTTATTTTCACATATCTCTCAACAATAATATCTATTTATAATATCCTCTTTCTCTTTATAGATTTTATGATCTCTATGGCAAATTTGTCAATTAAAAGTGAAAATTATAAAAAGGCAAGAGAGGAAGAGATTAGTGAACTAAGGAGAGGGCCATGGACTATTGAAGAAGACACATTGTTGATTCGTTATATTGCTGTTCATGGAGAAGGCCAATGGAATATATTGGCTAAACAAGCTGGTCTCAAGAGAACAGGAAAAAGTTGTCGACTCAGATGGTTGAATTACTTGAAACCCGACGTTAAGCAAGCCATGGACCAATCCTCTAACTTCTCCCTCAATTTTCCTCCTCCATCAGCTCTTCAAAACACAACATCACCGAACTCGTTTGAAACTGCCATTCATCCGTTCAACGACCACATGGGTGATGCCGCTCCTCTTCGGGTGCCATGTTCAGTCAGCCAATGGCCTGAAATCTCACAACCCCACCAAATTCTTGTGGTGAATTTGAGGAAGCTTGGAGGTTGA

Coding sequence (CDS)

ATGATCTCTATGGCAAATTTGTCAATTAAAAGTGAAAATTATAAAAAGGCAAGAGAGGAAGAGATTAGTGAACTAAGGAGAGGGCCATGGACTATTGAAGAAGACACATTGTTGATTCGTTATATTGCTGTTCATGGAGAAGGCCAATGGAATATATTGGCTAAACAAGCTGGTCTCAAGAGAACAGGAAAAAGTTGTCGACTCAGATGGTTGAATTACTTGAAACCCGACGTTAAGCAAGCCATGGACCAATCCTCTAACTTCTCCCTCAATTTTCCTCCTCCATCAGCTCTTCAAAACACAACATCACCGAACTCGTTTGAAACTGCCATTCATCCGTTCAACGACCACATGGGTGATGCCGCTCCTCTTCGGGTGCCATGTTCAGTCAGCCAATGGCCTGAAATCTCACAACCCCACCAAATTCTTGTGGTGAATTTGAGGAAGCTTGGAGGTTGA

Protein sequence

MISMANLSIKSENYKKAREEEISELRRGPWTIEEDTLLIRYIAVHGEGQWNILAKQAGLKRTGKSCRLRWLNYLKPDVKQAMDQSSNFSLNFPPPSALQNTTSPNSFETAIHPFNDHMGDAAPLRVPCSVSQWPEISQPHQILVVNLRKLGG

Homology

[Close]

BLAST of CsGy1G022100 vs. NCBI nr
Match: XP_004151034.2 (PREDICTED: myb-related protein 305-like [Cucumis sativus])

HSP 1 Score: 253.1 bits (645), Expect = 6.2e-64
Identity = 137/211 (64.93%), Postives = 138/211 (65.40%), Query Frame = 0


Query: 1   MISMANLSIKSENYKKAREEEISELRRGPWTIEEDTLLIRYIAVHGEGQWNILAKQAGLK 60
           MISMANLSIKSENYKKA EEEISELRRGPWTIEEDTLLIRYIAVHGEGQWNILAKQAGLK
Sbjct: 1   MISMANLSIKSENYKKASEEEISELRRGPWTIEEDTLLIRYIAVHGEGQWNILAKQAGLK 60

Query: 61  RTGKSCRLRWLNYLKPDVK----------------------------------------- 120
           RTGKSCRLRWLNYLKPDVK                                         
Sbjct: 61  RTGKSCRLRWLNYLKPDVKRGNLTLQEQLLILELHSKWGNRWSKIAQHLPGRTDNEIKNY 120

Query: 121 -------------------------------QAMDQSSNFSLNFPPPSALQNTTSPNSFE 140
                                          +AMDQSSNFSLNFPPPSALQNTTSPNSFE
Sbjct: 121 WRTRVQKQLRQLKVEANSKRFLDAIHHLSMLEAMDQSSNFSLNFPPPSALQNTTSPNSFE 180

[Close]

BLAST of CsGy1G022100 vs. NCBI nr
Match: XP_008457536.1 (PREDICTED: myb-related protein 305-like [Cucumis melo])

HSP 1 Score: 231.5 bits (589), Expect = 1.9e-57
Identity = 128/211 (60.66%), Postives = 130/211 (61.61%), Query Frame = 0


Query: 1   MISMANLSIKSENYKKAREEEISELRRGPWTIEEDTLLIRYIAVHGEGQWNILAKQAGLK 60
           MISMANLS KSENYK A EEEISELRRGPWTIEEDTLLIRYIA HGEGQWNILAKQAGLK
Sbjct: 1   MISMANLSTKSENYKNANEEEISELRRGPWTIEEDTLLIRYIAGHGEGQWNILAKQAGLK 60

Query: 61  RTGKSCRLRWLNYLKPDVK----------------------------------------- 120
           RTGKSCRLRWLNYLKPDVK                                         
Sbjct: 61  RTGKSCRLRWLNYLKPDVKRGNLTLQEQLLILELHSKWGNRWSKIAQHLPGRTDNEIKNY 120

Query: 121 -------------------------------QAMDQSSNFSLNFPPPSALQNTTSPNSFE 140
                                          +AMDQSSNFSLNFPPPSALQNTTSPNSFE
Sbjct: 121 WRTRVQKQLRQLKVEANSKRFLDAIHHLSMLEAMDQSSNFSLNFPPPSALQNTTSPNSFE 180

[Close]

BLAST of CsGy1G022100 vs. NCBI nr
Match: KGN65675.1 (hypothetical protein Csa_1G488750 [Cucumis sativus])

HSP 1 Score: 156.8 bits (395), Expect = 6.0e-35
Identity = 75/77 (97.40%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 4  MANLSIKSENYKKAREEEISELRRGPWTIEEDTLLIRYIAVHGEGQWNILAKQAGLKRTG 63
          MANLSIKSENYKKA EEEISELRRGPWTIEEDTLLIRYIAVHGEGQWNILAKQAGLKRTG
Sbjct: 1  MANLSIKSENYKKASEEEISELRRGPWTIEEDTLLIRYIAVHGEGQWNILAKQAGLKRTG 60

Query: 64 KSCRLRWLNYLKPDVKQ 81
          KSCRLRWLNYLKPDVK+
Sbjct: 61 KSCRLRWLNYLKPDVKR 77

[Close]

BLAST of CsGy1G022100 vs. NCBI nr
Match: XP_022156801.1 (transcription factor MYB21-like isoform X2 [Momordica charantia])

HSP 1 Score: 134.8 bits (338), Expect = 2.4e-28
Identity = 89/199 (44.72%), Postives = 95/199 (47.74%), Query Frame = 0


Query: 10  KSENYKKAREEEISELRRGPWTIEEDTLLIRYIAVHGEGQWNILAKQAGLKRTGKSCRLR 69
           KS + +    EEISELRRGPWTIEEDTLLI YIA HGEGQWNILAKQAGLKRTGKSCRLR
Sbjct: 6   KSLSNRPISGEEISELRRGPWTIEEDTLLIHYIAGHGEGQWNILAKQAGLKRTGKSCRLR 65

Query: 70  WLNYLKPDVK-------------------------------------------------- 129
           WLNYLKPDVK                                                  
Sbjct: 66  WLNYLKPDVKRGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNFWRTRVQKQA 125

Query: 130 ----------------------QAMDQSSNFSLNFPPPSALQNTTSPNSFETAIHPFNDH 137
                                 +AMD  ++ S NFPPPS L NT+ PNS ET   P N  
Sbjct: 126 RQLKIEANNRRFLDVIRHLNVLEAMDDPTSNSFNFPPPS-LHNTSLPNSSETTHLPANHG 185

[Close]

BLAST of CsGy1G022100 vs. NCBI nr
Match: XP_023523160.1 (transcription factor MYB62-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 129.8 bits (325), Expect = 7.9e-27
Identity = 79/191 (41.36%), Postives = 89/191 (46.60%), Query Frame = 0


Query: 20  EEISELRRGPWTIEEDTLLIRYIAVHGEGQWNILAKQAGLKRTGKSCRLRWLNYLKPDVK 79
           EE SELRRGPWT+EEDTLLI YIA HGEGQWN+LAKQAGLKRTGKSCRLRWLNYLKPD+K
Sbjct: 14  EEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSCRLRWLNYLKPDIK 73

Query: 80  ------------------------------------------------------------ 138
                                                                       
Sbjct: 74  RGNLTLQEQLLILELHSKWGNRWSKIAQELPGRTDNEIKNYWRTRVQKQLRQLKVQAHSR 133

[Close]

BLAST of CsGy1G022100 vs. TAIR10
Match: AT1G68320.1 (myb domain protein 62)

HSP 1 Score: 105.5 bits (262), Expect = 2.9e-23
Identity = 49/77 (63.64%), Postives = 62/77 (80.52%), Query Frame = 0


Query: 4  MANLSIKSENYKKAREEEISELRRGPWTIEEDTLLIRYIAVHGEGQWNILAKQAGLKRTG 63
          M N   K +++K++ +E   ELRRGPWT+EEDTLL  YI  +GEG+WN +AK AGLKRTG
Sbjct: 1  MENSMKKKKSFKESEDE---ELRRGPWTLEEDTLLTNYILHNGEGRWNHVAKCAGLKRTG 60

Query: 64 KSCRLRWLNYLKPDVKQ 81
          KSCRLRWLNYLKPD+++
Sbjct: 61 KSCRLRWLNYLKPDIRR 74

[Close]

BLAST of CsGy1G022100 vs. TAIR10
Match: AT1G25340.1 (myb domain protein 116)

HSP 1 Score: 103.2 bits (256), Expect = 1.4e-22
Identity = 48/77 (62.34%), Postives = 61/77 (79.22%), Query Frame = 0


Query: 4  MANLSIKSENYKKAREEEISELRRGPWTIEEDTLLIRYIAVHGEGQWNILAKQAGLKRTG 63
          M+N++ K  N      EE +E R+GPWT+EEDTLL  YI+ +GEG+WN+LAK +GLKR G
Sbjct: 1  MSNITKKKCN----GNEEGAEQRKGPWTLEEDTLLTNYISHNGEGRWNLLAKSSGLKRAG 60

Query: 64 KSCRLRWLNYLKPDVKQ 81
          KSCRLRWLNYLKPD+K+
Sbjct: 61 KSCRLRWLNYLKPDIKR 73

[Close]

BLAST of CsGy1G022100 vs. TAIR10
Match: AT5G40350.1 (myb domain protein 24)

HSP 1 Score: 103.2 bits (256), Expect = 1.4e-22
Identity = 44/58 (75.86%), Postives = 52/58 (89.66%), Query Frame = 0


Query: 23 SELRRGPWTIEEDTLLIRYIAVHGEGQWNILAKQAGLKRTGKSCRLRWLNYLKPDVKQ 81
          +E+R+GPWT+EED +LI YIA HGEG WN LAK AGLKRTGKSCRLRWLNYL+PDV++
Sbjct: 15 AEVRKGPWTMEEDLILINYIANHGEGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDVRR 72

[Close]

BLAST of CsGy1G022100 vs. TAIR10
Match: AT3G27810.1 (myb domain protein 21)

HSP 1 Score: 102.1 bits (253), Expect = 3.2e-22
Identity = 43/58 (74.14%), Postives = 52/58 (89.66%), Query Frame = 0


Query: 23 SELRRGPWTIEEDTLLIRYIAVHGEGQWNILAKQAGLKRTGKSCRLRWLNYLKPDVKQ 81
          +E+R+GPWT+EED +LI YIA HG+G WN LAK AGLKRTGKSCRLRWLNYL+PDV++
Sbjct: 18 AEVRKGPWTMEEDLILINYIANHGDGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDVRR 75

[Close]

BLAST of CsGy1G022100 vs. TAIR10
Match: AT5G49620.2 (myb domain protein 78)

HSP 1 Score: 100.1 bits (248), Expect = 1.2e-21
Identity = 46/75 (61.33%), Postives = 57/75 (76.00%), Query Frame = 0


Query: 6  NLSIKSENYKKAREEEISELRRGPWTIEEDTLLIRYIAVHGEGQWNILAKQAGLKRTGKS 65
          +L I     +  + EE  ++RRGPWT+EED  LI YIA HGEG+WN LA+ A LKRTGKS
Sbjct: 7  SLKINKNMEEFTKVEEEMDVRRGPWTVEEDLELINYIASHGEGRWNSLARCAELKRTGKS 66

Query: 66 CRLRWLNYLKPDVKQ 81
          CRLRWLNYL+PDV++
Sbjct: 67 CRLRWLNYLRPDVRR 81

[Close]

BLAST of CsGy1G022100 vs. Swiss-Prot
Match: sp|Q2QZJ8|JAMYB_ORYSJ (Transcription factor JAMYB OS=Oryza sativa subsp. japonica OX=39947 GN=JAMYB PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.0e-22
Identity = 47/72 (65.28%), Postives = 57/72 (79.17%), Query Frame = 0


Query: 9  IKSENYKKAREEEISELRRGPWTIEEDTLLIRYIAVHGEGQWNILAKQAGLKRTGKSCRL 68
          +  E  + A E   +ELRRGPWT++ED  LI YI+ HGEG+WN LA+ AGLKRTGKSCRL
Sbjct: 13 VPGEQQEAAAELSSAELRRGPWTVDEDLTLINYISDHGEGRWNALARAAGLKRTGKSCRL 72

Query: 69 RWLNYLKPDVKQ 81
          RWLNYL+PDVK+
Sbjct: 73 RWLNYLRPDVKR 84

[Close]

BLAST of CsGy1G022100 vs. Swiss-Prot
Match: sp|Q10MB4|MYB2_ORYSJ (Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.0e-22
Identity = 46/64 (71.88%), Postives = 56/64 (87.50%), Query Frame = 0


Query: 19 EEEI--SELRRGPWTIEEDTLLIRYIAVHGEGQWNILAKQAGLKRTGKSCRLRWLNYLKP 78
          EEE+   +LRRGPWT+EED LL+ YIA HGEG+WN LA+ AGLKRTGKSCRLRWLNYL+P
Sbjct: 12 EEEVMGGDLRRGPWTVEEDLLLVNYIAAHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRP 71

Query: 79 DVKQ 81
          D+++
Sbjct: 72 DLRR 75

[Close]

BLAST of CsGy1G022100 vs. Swiss-Prot
Match: sp|Q9C9G7|MYB62_ARATH (Transcription factor MYB62 OS=Arabidopsis thaliana OX=3702 GN=MYB62 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 5.2e-22
Identity = 49/77 (63.64%), Postives = 62/77 (80.52%), Query Frame = 0


Query: 4  MANLSIKSENYKKAREEEISELRRGPWTIEEDTLLIRYIAVHGEGQWNILAKQAGLKRTG 63
          M N   K +++K++ +E   ELRRGPWT+EEDTLL  YI  +GEG+WN +AK AGLKRTG
Sbjct: 1  MENSMKKKKSFKESEDE---ELRRGPWTLEEDTLLTNYILHNGEGRWNHVAKCAGLKRTG 60

Query: 64 KSCRLRWLNYLKPDVKQ 81
          KSCRLRWLNYLKPD+++
Sbjct: 61 KSCRLRWLNYLKPDIRR 74

[Close]

BLAST of CsGy1G022100 vs. Swiss-Prot
Match: sp|Q9SPG9|MYB24_ARATH (Transcription factor MYB24 OS=Arabidopsis thaliana OX=3702 GN=MYB24 PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.6e-21
Identity = 44/58 (75.86%), Postives = 52/58 (89.66%), Query Frame = 0


Query: 23 SELRRGPWTIEEDTLLIRYIAVHGEGQWNILAKQAGLKRTGKSCRLRWLNYLKPDVKQ 81
          +E+R+GPWT+EED +LI YIA HGEG WN LAK AGLKRTGKSCRLRWLNYL+PDV++
Sbjct: 15 AEVRKGPWTMEEDLILINYIANHGEGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDVRR 72

[Close]

BLAST of CsGy1G022100 vs. Swiss-Prot
Match: sp|Q9LK95|MYB21_ARATH (Transcription factor MYB21 OS=Arabidopsis thaliana OX=3702 GN=MYB21 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.7e-21
Identity = 43/58 (74.14%), Postives = 52/58 (89.66%), Query Frame = 0


Query: 23 SELRRGPWTIEEDTLLIRYIAVHGEGQWNILAKQAGLKRTGKSCRLRWLNYLKPDVKQ 81
          +E+R+GPWT+EED +LI YIA HG+G WN LAK AGLKRTGKSCRLRWLNYL+PDV++
Sbjct: 18 AEVRKGPWTMEEDLILINYIANHGDGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDVRR 75

[Close]

BLAST of CsGy1G022100 vs. TrEMBL
Match: tr|A0A1S3C718|A0A1S3C718_CUCME (myb-related protein 305-like OS=Cucumis melo OX=3656 GN=LOC103497203 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.3e-57
Identity = 128/211 (60.66%), Postives = 130/211 (61.61%), Query Frame = 0


Query: 1   MISMANLSIKSENYKKAREEEISELRRGPWTIEEDTLLIRYIAVHGEGQWNILAKQAGLK 60
           MISMANLS KSENYK A EEEISELRRGPWTIEEDTLLIRYIA HGEGQWNILAKQAGLK
Sbjct: 1   MISMANLSTKSENYKNANEEEISELRRGPWTIEEDTLLIRYIAGHGEGQWNILAKQAGLK 60

Query: 61  RTGKSCRLRWLNYLKPDVK----------------------------------------- 120
           RTGKSCRLRWLNYLKPDVK                                         
Sbjct: 61  RTGKSCRLRWLNYLKPDVKRGNLTLQEQLLILELHSKWGNRWSKIAQHLPGRTDNEIKNY 120

Query: 121 -------------------------------QAMDQSSNFSLNFPPPSALQNTTSPNSFE 140
                                          +AMDQSSNFSLNFPPPSALQNTTSPNSFE
Sbjct: 121 WRTRVQKQLRQLKVEANSKRFLDAIHHLSMLEAMDQSSNFSLNFPPPSALQNTTSPNSFE 180

[Close]

BLAST of CsGy1G022100 vs. TrEMBL
Match: tr|A0A0A0LUR0|A0A0A0LUR0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G488750 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 4.0e-35
Identity = 75/77 (97.40%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 4  MANLSIKSENYKKAREEEISELRRGPWTIEEDTLLIRYIAVHGEGQWNILAKQAGLKRTG 63
          MANLSIKSENYKKA EEEISELRRGPWTIEEDTLLIRYIAVHGEGQWNILAKQAGLKRTG
Sbjct: 1  MANLSIKSENYKKASEEEISELRRGPWTIEEDTLLIRYIAVHGEGQWNILAKQAGLKRTG 60

Query: 64 KSCRLRWLNYLKPDVKQ 81
          KSCRLRWLNYLKPDVK+
Sbjct: 61 KSCRLRWLNYLKPDVKR 77

[Close]

BLAST of CsGy1G022100 vs. TrEMBL
Match: tr|A0A0A0LXB0|A0A0A0LXB0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G488740 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 9.8e-26
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0


Query: 82  MDQSSNFSLNFPPPSALQNTTSPNSFETAIHPFNDHMGDAAPLRVPCSVSQWPEISQP 140
           MDQSSNFSLNFPPPSALQNTTSPNSFETAIHPFNDHMGDAAPLRVPCSVSQWPEISQP
Sbjct: 1   MDQSSNFSLNFPPPSALQNTTSPNSFETAIHPFNDHMGDAAPLRVPCSVSQWPEISQP 58

[Close]

BLAST of CsGy1G022100 vs. TrEMBL
Match: tr|A0A199VTY9|A0A199VTY9_ANACO (Transcription factor MYB108 OS=Ananas comosus OX=4615 GN=ACMD2_22591 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 5.4e-24
Identity = 53/71 (74.65%), Postives = 63/71 (88.73%), Query Frame = 0


Query: 10 KSENYKKAREEEISELRRGPWTIEEDTLLIRYIAVHGEGQWNILAKQAGLKRTGKSCRLR 69
          K  N K+  EEEI+ELRRGPWT+EED LL+RYIA HGEG+WN+LA+ +GLKRTGKSCRLR
Sbjct: 5  KGANNKQRGEEEITELRRGPWTLEEDELLMRYIAYHGEGRWNLLARCSGLKRTGKSCRLR 64

Query: 70 WLNYLKPDVKQ 81
          WLNYLKPD+K+
Sbjct: 65 WLNYLKPDIKR 75

[Close]

BLAST of CsGy1G022100 vs. TrEMBL
Match: tr|J9JF55|J9JF55_HUMLU (Myb transcription factor OS=Humulus lupulus OX=3486 GN=HlMyb6 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 2.0e-23
Identity = 51/65 (78.46%), Postives = 59/65 (90.77%), Query Frame = 0


Query: 16 KAREEEISELRRGPWTIEEDTLLIRYIAVHGEGQWNILAKQAGLKRTGKSCRLRWLNYLK 75
          K   EE +ELRRGPWT+EEDTLLI YI++HGEG WN+LAK+AGLKRTGKSCRLRWLNYLK
Sbjct: 6  KCHNEEEAELRRGPWTLEEDTLLIHYISLHGEGHWNLLAKRAGLKRTGKSCRLRWLNYLK 65

Query: 76 PDVKQ 81
          PD+K+
Sbjct: 66 PDIKR 70

The following BLAST results are available for this feature:

BLAST of CsGy1G022100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151034.2	6.2e-64	64.93	PREDICTED: myb-related protein 305-like [Cucumis sativus]	[more]
XP_008457536.1	1.9e-57	60.66	PREDICTED: myb-related protein 305-like [Cucumis melo]	[more]
KGN65675.1	6.0e-35	97.40	hypothetical protein Csa_1G488750 [Cucumis sativus]	[more]
XP_022156801.1	2.4e-28	44.72	transcription factor MYB21-like isoform X2 [Momordica charantia]	[more]
XP_023523160.1	7.9e-27	41.36	transcription factor MYB62-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy1G022100 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68320.1	2.9e-23	63.64	myb domain protein 62	[more]
AT1G25340.1	1.4e-22	62.34	myb domain protein 116	[more]
AT5G40350.1	1.4e-22	75.86	myb domain protein 24	[more]
AT3G27810.1	3.2e-22	74.14	myb domain protein 21	[more]
AT5G49620.2	1.2e-21	61.33	myb domain protein 78	[more]

BLAST of CsGy1G022100 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q2QZJ8\|JAMYB_ORYSJ	3.0e-22	65.28	Transcription factor JAMYB OS=Oryza sativa subsp. japonica OX=39947 GN=JAMYB PE=...	[more]
sp\|Q10MB4\|MYB2_ORYSJ	3.0e-22	71.88	Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 ...	[more]
sp\|Q9C9G7\|MYB62_ARATH	5.2e-22	63.64	Transcription factor MYB62 OS=Arabidopsis thaliana OX=3702 GN=MYB62 PE=2 SV=1	[more]
sp\|Q9SPG9\|MYB24_ARATH	2.6e-21	75.86	Transcription factor MYB24 OS=Arabidopsis thaliana OX=3702 GN=MYB24 PE=1 SV=1	[more]
sp\|Q9LK95\|MYB21_ARATH	5.7e-21	74.14	Transcription factor MYB21 OS=Arabidopsis thaliana OX=3702 GN=MYB21 PE=1 SV=1	[more]

BLAST of CsGy1G022100 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C718\|A0A1S3C718_CUCME	1.3e-57	60.66	myb-related protein 305-like OS=Cucumis melo OX=3656 GN=LOC103497203 PE=4 SV=1	[more]
tr\|A0A0A0LUR0\|A0A0A0LUR0_CUCSA	4.0e-35	97.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G488750 PE=4 SV=1	[more]
tr\|A0A0A0LXB0\|A0A0A0LXB0_CUCSA	9.8e-26	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G488740 PE=4 SV=1	[more]
tr\|A0A199VTY9\|A0A199VTY9_ANACO	5.4e-24	74.65	Transcription factor MYB108 OS=Ananas comosus OX=4615 GN=ACMD2_22591 PE=4 SV=1	[more]
tr\|J9JF55\|J9JF55_HUMLU	2.0e-23	78.46	Myb transcription factor OS=Humulus lupulus OX=3486 GN=HlMyb6 PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G022100.1	CsGy1G022100.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 26..76 e-value: 7.5E-14 score: 62.0
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 27..74 e-value: 3.4E-16 score: 59.0
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 29..74 e-value: 6.84711E-12 score: 56.0446
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 24..80 e-value: 9.1E-19 score: 69.1
None	No IPR available	PANTHER	PTHR10641:SF510	MYB TRANSCRIPTION FACTOR	coord: 13..79
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 13..79
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 22..78 score: 24.138
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 28..80

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G022100	Cla008278	Watermelon (97103) v1	cgybwmB023
CsGy1G022100	Csa1G488740	Cucumber (Chinese Long) v2	cgybcuB002
CsGy1G022100	MELO3C020699	Melon (DHL92) v3.5.1	cgybmeB023
CsGy1G022100	ClCG03G001860	Watermelon (Charleston Gray)	cgybwcgB044
CsGy1G022100	CSPI01G22520	Wild cucumber (PI 183967)	cgybcpiB002
CsGy1G022100	Cp4.1LG02g13220	Cucurbita pepo (Zucchini)	cgybcpeB099
CsGy1G022100	MELO3C020699.2	Melon (DHL92) v3.6.1	cgybmedB021
CsGy1G022100	CsaV3_1G033700	Cucumber (Chinese Long) v3	cgybcucB001
CsGy1G022100	Cla97C03G052870	Watermelon (97103) v2	cgybwmbB042
CsGy1G022100	Bhi08G000338	Wax gourd	cgybwgoB038
CsGy1G022100	Carg12343	Silver-seed gourd	carcgybB0448

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G022100	Cucurbita maxima (Rimu)	cgybcmaB075
CsGy1G022100	Cucurbita maxima (Rimu)	cgybcmaB104
CsGy1G022100	Cucurbita maxima (Rimu)	cgybcmaB117
CsGy1G022100	Cucurbita maxima (Rimu)	cgybcmaB118
CsGy1G022100	Cucurbita maxima (Rimu)	cgybcmaB121
CsGy1G022100	Cucurbita moschata (Rifu)	cgybcmoB069
CsGy1G022100	Cucurbita moschata (Rifu)	cgybcmoB098
CsGy1G022100	Cucurbita moschata (Rifu)	cgybcmoB109
CsGy1G022100	Cucurbita moschata (Rifu)	cgybcmoB111
CsGy1G022100	Cucurbita pepo (Zucchini)	cgybcpeB035
CsGy1G022100	Cucurbita pepo (Zucchini)	cgybcpeB071
CsGy1G022100	Cucurbita pepo (Zucchini)	cgybcpeB138
CsGy1G022100	Bottle gourd (USVL1VR-Ls)	cgyblsiB006
CsGy1G022100	Bottle gourd (USVL1VR-Ls)	cgyblsiB027
CsGy1G022100	Watermelon (Charleston Gray)	cgybwcgB028
CsGy1G022100	Watermelon (97103) v1	cgybwmB069
CsGy1G022100	Silver-seed gourd	carcgybB0316
CsGy1G022100	Silver-seed gourd	carcgybB0341
CsGy1G022100	Silver-seed gourd	carcgybB0724
CsGy1G022100	Watermelon (97103) v2	cgybwmbB027
CsGy1G022100	Wax gourd	cgybwgoB016
CsGy1G022100	Wax gourd	cgybwgoB018