Carg12343-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12343-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	MYB transcription factor
Location	Cucurbita_argyrosperma_scaffold_074 : 415137 .. 416250 (-)
Sequence length	877

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAAACCCTTTGTTTTTGCCATTTGTTATGCACATCTACACTCCAATAATACCCTCTTTCCCTCTTGTCCCTATGGCTGGTGTGTCAAATACTGCAGCCCATAGGCCAAGTGAGGAAGAAAGTGAGCTAAGAAGAGGGCCATGGACTGTTGAAGAGGACACATTGTTGATTCATTATATTGCTGCTCATGGTGAAGGCCAATGGAACCTATTGGCTAAACAAGCTGGTATTTATACACACTTGCATTCTCTCGATTCGAAATTCTCTCGTCTCTTCTTCAATCGTTGTCGTTTTTCAGGTCTCAAGAGAACAGGAAAAAGTTGCAGATTGAGATGGCTGAATTATTTAAAACCTGATATTAAACGTGGGAATCTCACTCTTCAAGAACAACTCCTCATCCTCGAACTTCATTCCAAATGGGGTAACAGGTATGTTGACGATCATATTAATTTGATTTACAATCACTTTTTAGAACGTGATTATATAGAATTTGTTTTAAAAGTATCGATATTTGATTGAATCTAAAAAAATTTAAGACATACCCTTATTAGTTTTTGGATATTTGATGTTTTTTTTTTTTTTCTTTTTTGTAGGTGGTCCAAAATTGCACAACAATTACCGGGAAGAACGGATAACGAGATTAAGAACTACTGGAGGACCCGAGTTCAAAAACAGTTACGTCAGCTGAAAGTACAAGCTCACAGCAGGAAACTTTTGGATGCCATTTGTCATTTGAGCATGCTAGAAGCCATGGACCAAACTTCCAATTACTCCATCAATTTGCCTCCATCTCTCCATAACATGAACTTACCAAACTCATCAAATAGTACTGTTCTTCTTCCGGCCAACCATAGCAGCGGAGCTCCTCCTCCGCCACCCCCACGTTCCGTCCAGCAATGGCCTGAAATCTCAACATGGCCACCAAGTCCTTGTGGTGAATTCATGGAAGCTTGGAGGTTTGACATGGTGGAGCAGAAGCAGCTACATGAGCCAGTTGGTGCATTGGGTGATTGGGAAGTTGGTGATCGTGATGCCCAAATGATAGCACCAGATTGGGTGTTGGAGGATGCCATGGTTGAAAACTTGTGGAGCTTGGATCATCACTTGATATAA

mRNA sequence

ATAAAACCCTTTGTTTTTGCCATTTGTTATGCACATCTACACTCCAATAATACCCTCTTTCCCTCTTGTCCCTATGGCTGGTGTGTCAAATACTGCAGCCCATAGGCCAAGTGAGGAAGAAAGTGAGCTAAGAAGAGGGCCATGGACTGTTGAAGAGGACACATTGTTGATTCATTATATTGCTGCTCATGGTGAAGGCCAATGGAACCTATTGGCTAAACAAGCTGGTCTCAAGAGAACAGGAAAAAGTTGCAGATTGAGATGGCTGAATTATTTAAAACCTGATATTAAACGTGGGAATCTCACTCTTCAAGAACAACTCCTCATCCTCGAACTTCATTCCAAATGGGGTAACAGGTGGTCCAAAATTGCACAACAATTACCGGGAAGAACGGATAACGAGATTAAGAACTACTGGAGGACCCGAGTTCAAAAACAGTTACGTCAGCTGAAAGTACAAGCTCACAGCAGGAAACTTTTGGATGCCATTTGTCATTTGAGCATGCTAGAAGCCATGGACCAAACTTCCAATTACTCCATCAATTTGCCTCCATCTCTCCATAACATGAACTTACCAAACTCATCAAATAGTACTGTTCTTCTTCCGGCCAACCATAGCAGCGGAGCTCCTCCTCCGCCACCCCCACGTTCCGTCCAGCAATGGCCTGAAATCTCAACATGGCCACCAAGTCCTTGTGGTGAATTCATGGAAGCTTGGAGGTTTGACATGGTGGAGCAGAAGCAGCTACATGAGCCAGTTGGTGCATTGGGTGATTGGGAAGTTGGTGATCGTGATGCCCAAATGATAGCACCAGATTGGGTGTTGGAGGATGCCATGGTTGAAAACTTGTGGAGCTTGGATCATCACTTGATATAA

Coding sequence (CDS)

ATGCACATCTACACTCCAATAATACCCTCTTTCCCTCTTGTCCCTATGGCTGGTGTGTCAAATACTGCAGCCCATAGGCCAAGTGAGGAAGAAAGTGAGCTAAGAAGAGGGCCATGGACTGTTGAAGAGGACACATTGTTGATTCATTATATTGCTGCTCATGGTGAAGGCCAATGGAACCTATTGGCTAAACAAGCTGGTCTCAAGAGAACAGGAAAAAGTTGCAGATTGAGATGGCTGAATTATTTAAAACCTGATATTAAACGTGGGAATCTCACTCTTCAAGAACAACTCCTCATCCTCGAACTTCATTCCAAATGGGGTAACAGGTGGTCCAAAATTGCACAACAATTACCGGGAAGAACGGATAACGAGATTAAGAACTACTGGAGGACCCGAGTTCAAAAACAGTTACGTCAGCTGAAAGTACAAGCTCACAGCAGGAAACTTTTGGATGCCATTTGTCATTTGAGCATGCTAGAAGCCATGGACCAAACTTCCAATTACTCCATCAATTTGCCTCCATCTCTCCATAACATGAACTTACCAAACTCATCAAATAGTACTGTTCTTCTTCCGGCCAACCATAGCAGCGGAGCTCCTCCTCCGCCACCCCCACGTTCCGTCCAGCAATGGCCTGAAATCTCAACATGGCCACCAAGTCCTTGTGGTGAATTCATGGAAGCTTGGAGGTTTGACATGGTGGAGCAGAAGCAGCTACATGAGCCAGTTGGTGCATTGGGTGATTGGGAAGTTGGTGATCGTGATGCCCAAATGATAGCACCAGATTGGGTGTTGGAGGATGCCATGGTTGAAAACTTGTGGAGCTTGGATCATCACTTGATATAA

Protein sequence

MHIYTPIIPSFPLVPMAGVSNTAAHRPSEEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSCRLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKQLRQLKVQAHSRKLLDAICHLSMLEAMDQTSNYSINLPPSLHNMNLPNSSNSTVLLPANHSSGAPPPPPPRSVQQWPEISTWPPSPCGEFMEAWRFDMVEQKQLHEPVGALGDWEVGDRDAQMIAPDWVLEDAMVENLWSLDHHLI

Homology

[Close]

BLAST of Carg12343-RA vs. NCBI nr
Match: XP_022998167.1 (transcription factor MYB24-like [Cucurbita maxima])

HSP 1 Score: 492.3 bits (1266), Expect = 1.1e-135
Identity = 256/267 (95.88%), Postives = 262/267 (98.13%), Query Frame = 0


Query: 16  MAGVSNTAAHRPSEEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSC 75
           MAGVS TA HRPSEEESELRRGPWTVEEDTLLIHYIAAHGEGQWN+LAKQAGLKRTGKSC
Sbjct: 1   MAGVSKTATHRPSEEESELRRGPWTVEEDTLLIHYIAAHGEGQWNILAKQAGLKRTGKSC 60

Query: 76  RLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQ 135
           RLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQ+LPGRTDNEIKNYWRTRVQ
Sbjct: 61  RLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQELPGRTDNEIKNYWRTRVQ 120

Query: 136 KQLRQLKVQAHSRKLLDAICHLSMLEAMDQTSNYSINLPPSLHNMNLPNSXXXXXXXXXX 195
           KQLRQLKVQAHSRKLLDAICHLSMLEAMDQTSNYSINLPPSLHNMNLPNSXXXXXXXXXX
Sbjct: 121 KQLRQLKVQAHSRKLLDAICHLSMLEAMDQTSNYSINLPPSLHNMNLPNSXXXXXXXXXX 180

Query: 196 XXXXXXXXXXXXSVQQWPEISTWPPSPCGEFMEAWRFDMVEQKQLHEPVGALGDWEVGDR 255
           XXXXXXXXXXXXSVQQWPE+S WPPSPCGEF+E+WRFDMVEQKQ HEPVGA+GDWEVGDR
Sbjct: 181 XXXXXXXXXXXXSVQQWPEVSAWPPSPCGEFIESWRFDMVEQKQQHEPVGAVGDWEVGDR 240

Query: 256 DAQMIAPDWVLEDAMVENLWSLDHHLI 283
           DAQMIAPDWVLED MVENLWSLDHHLI
Sbjct: 241 DAQMIAPDWVLEDVMVENLWSLDHHLI 267

[Close]

BLAST of Carg12343-RA vs. NCBI nr
Match: XP_023523160.1 (transcription factor MYB62-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 491.9 bits (1265), Expect = 1.5e-135
Identity = 251/268 (93.66%), Postives = 253/268 (94.40%), Query Frame = 0


Query: 16  MAGVSNTAAHRPSEEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSC 75
           MAGVSNTAAHRPSEEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSC
Sbjct: 1   MAGVSNTAAHRPSEEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSC 60

Query: 76  RLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQ 135
           RLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQ+LPGRTDNEIKNYWRTRVQ
Sbjct: 61  RLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQELPGRTDNEIKNYWRTRVQ 120

Query: 136 KQLRQLKVQAHSRKLLDAICHLSMLEAMDQTSNYSINLPPSLHNMNLPN-SXXXXXXXXX 195
           KQLRQLKVQAHSRKLLDAICHLSMLEAMDQTSNYSINLPPSLHNMNLPN S         
Sbjct: 121 KQLRQLKVQAHSRKLLDAICHLSMLEAMDQTSNYSINLPPSLHNMNLPNSSNSTVVLPAN 180

Query: 196 XXXXXXXXXXXXXSVQQWPEISTWPPSPCGEFMEAWRFDMVEQKQLHEPVGALGDWEVGD 255
            XXXXXXXXXXXXSVQQWPE+S WPPSPCGEFMEAWRFDMV QKQ HE VGALGDWEVGD
Sbjct: 181 HXXXXXXXXXXXXSVQQWPEVSAWPPSPCGEFMEAWRFDMVGQKQQHEAVGALGDWEVGD 240

Query: 256 RDAQMIAPDWVLEDAMVENLWSLDHHLI 283
           RDAQMIAPDWVLEDAMVENLWSLDHHLI
Sbjct: 241 RDAQMIAPDWVLEDAMVENLWSLDHHLI 268

[Close]

BLAST of Carg12343-RA vs. NCBI nr
Match: XP_022949509.1 (transcription factor MYB62-like [Cucurbita moschata])

HSP 1 Score: 490.3 bits (1261), Expect = 4.3e-135
Identity = 260/268 (97.01%), Postives = 262/268 (97.76%), Query Frame = 0


Query: 16  MAGVSNTAAHRPSEEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSC 75
           MAGVS+TAAHRPSEEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSC
Sbjct: 1   MAGVSSTAAHRPSEEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSC 60

Query: 76  RLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQ 135
           RLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQ
Sbjct: 61  RLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQ 120

Query: 136 KQLRQLKVQAHSRKLLDAICHLSMLEAMDQTSNYSINLPPSLHNMNLPN-SXXXXXXXXX 195
           KQLRQLKVQAHSRKLLDAICHLSMLEAMDQTSNYSINLPPSLHNMNLPN  XXXXXXXXX
Sbjct: 121 KQLRQLKVQAHSRKLLDAICHLSMLEAMDQTSNYSINLPPSLHNMNLPNXXXXXXXXXXX 180

Query: 196 XXXXXXXXXXXXXSVQQWPEISTWPPSPCGEFMEAWRFDMVEQKQLHEPVGALGDWEVGD 255
           XXXXXXXXXXXXX   QWPEIS WPPSPCGEFMEAWRFDMVEQKQLHEPVGALGDWEVGD
Sbjct: 181 XXXXXXXXXXXXXXXXQWPEISAWPPSPCGEFMEAWRFDMVEQKQLHEPVGALGDWEVGD 240

Query: 256 RDAQMIAPDWVLEDAMVENLWSLDHHLI 283
           RDAQMIAPDWVLEDAMVENLWSLDHHL+
Sbjct: 241 RDAQMIAPDWVLEDAMVENLWSLDHHLM 268

[Close]

BLAST of Carg12343-RA vs. NCBI nr
Match: XP_004151034.2 (PREDICTED: myb-related protein 305-like [Cucumis sativus])

HSP 1 Score: 377.5 bits (968), Expect = 4.0e-101
Identity = 192/277 (69.31%), Postives = 216/277 (77.98%), Query Frame = 0


Query: 13  LVPMAGVSNTAAH--RPSEEE-SELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLK 72
           ++ MA +S  + +  + SEEE SELRRGPWT+EEDTLLI YIA HGEGQWN+LAKQAGLK
Sbjct: 1   MISMANLSIKSENYKKASEEEISELRRGPWTIEEDTLLIRYIAVHGEGQWNILAKQAGLK 60

Query: 73  RTGKSCRLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNY 132
           RTGKSCRLRWLNYLKPD+KRGNLTLQEQLLILELHSKWGNRWSKIAQ LPGRTDNEIKNY
Sbjct: 61  RTGKSCRLRWLNYLKPDVKRGNLTLQEQLLILELHSKWGNRWSKIAQHLPGRTDNEIKNY 120

Query: 133 WRTRVQKQLRQLKVQAHSRKLLDAICHLSMLEAMDQTSNYSINLPP--SLHNMNLPNSXX 192
           WRTRVQKQLRQLKV+A+S++ LDAI HLSMLEAMDQ+SN+S+N PP  +L N   PNS  
Sbjct: 121 WRTRVQKQLRQLKVEANSKRFLDAIHHLSMLEAMDQSSNFSLNFPPPSALQNTTSPNSFE 180

Query: 193 XXXXXXXXXXXXXXXXXXXXSVQQWPEISTWPPSPCGEFMEAWRFDMVE-QKQLHEPVGA 252
                               SV QWPEIS  PP+ C EF EAWR +MVE QKQ  EPV +
Sbjct: 181 TAIHPFNDHMGDAAPLRVPCSVSQWPEISQPPPNSCDEFEEAWRLNMVEMQKQKQEPVCS 240

Query: 253 LGDWEVGDRDAQMIAPDWVLEDAMVENLWSL-DHHLI 283
           LG WE+ D D  M APDW++ED+MVENLWSL DHHLI
Sbjct: 241 LGAWEIEDCDVHMAAPDWLMEDSMVENLWSLEDHHLI 277

[Close]

BLAST of Carg12343-RA vs. NCBI nr
Match: XP_008457536.1 (PREDICTED: myb-related protein 305-like [Cucumis melo])

HSP 1 Score: 367.5 bits (942), Expect = 4.2e-98
Identity = 188/277 (67.87%), Postives = 213/277 (76.90%), Query Frame = 0


Query: 13  LVPMAGVSNTAAHRPS---EEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLK 72
           ++ MA +S  + +  +   EE SELRRGPWT+EEDTLLI YIA HGEGQWN+LAKQAGLK
Sbjct: 1   MISMANLSTKSENYKNANEEEISELRRGPWTIEEDTLLIRYIAGHGEGQWNILAKQAGLK 60

Query: 73  RTGKSCRLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNY 132
           RTGKSCRLRWLNYLKPD+KRGNLTLQEQLLILELHSKWGNRWSKIAQ LPGRTDNEIKNY
Sbjct: 61  RTGKSCRLRWLNYLKPDVKRGNLTLQEQLLILELHSKWGNRWSKIAQHLPGRTDNEIKNY 120

Query: 133 WRTRVQKQLRQLKVQAHSRKLLDAICHLSMLEAMDQTSNYSINLPP--SLHNMNLPNSXX 192
           WRTRVQKQLRQLKV+A+S++ LDAI HLSMLEAMDQ+SN+S+N PP  +L N   PNS  
Sbjct: 121 WRTRVQKQLRQLKVEANSKRFLDAIHHLSMLEAMDQSSNFSLNFPPPSALQNTTSPNS-F 180

Query: 193 XXXXXXXXXXXXXXXXXXXXSVQQWPEISTWPPSPCGEFMEAWRFDMVE-QKQLHEPVGA 252
                               S  QWP+IS  PPS CGEF EAWR +MVE QKQ  EPV +
Sbjct: 181 ETAIHPFNDHGGGAPLRAPCSASQWPDISQPPPSSCGEFGEAWRLNMVEMQKQKQEPVCS 240

Query: 253 LGDWEVGDRDAQMIAPDWVLEDAMVENLWSL-DHHLI 283
           LG WE+ D D  M APDW++ED+MVENLWSL D +LI
Sbjct: 241 LGAWEIEDCDVPMAAPDWLMEDSMVENLWSLEDQNLI 276

[Close]

BLAST of Carg12343-RA vs. TAIR10
Match: AT1G68320.1 (myb domain protein 62)

HSP 1 Score: 214.5 bits (545), Expect = 8.2e-56
Identity = 100/125 (80.00%), Postives = 112/125 (89.60%), Query Frame = 0


Query: 30  EESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSCRLRWLNYLKPDIKR 89
           E+ ELRRGPWT+EEDTLL +YI  +GEG+WN +AK AGLKRTGKSCRLRWLNYLKPDI+R
Sbjct: 15  EDEELRRGPWTLEEDTLLTNYILHNGEGRWNHVAKCAGLKRTGKSCRLRWLNYLKPDIRR 74

Query: 90  GNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKQLRQLKVQAHSRK 149
           GNLT QEQLLILELHSKWGNRWSKIAQ LPGRTDNEIKNYWRTRVQKQ RQL ++++S K
Sbjct: 75  GNLTPQEQLLILELHSKWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQARQLNIESNSDK 134

Query: 150 LLDAI 155
             DA+
Sbjct: 135 FFDAV 139

[Close]

BLAST of Carg12343-RA vs. TAIR10
Match: AT1G25340.1 (myb domain protein 116)

HSP 1 Score: 209.5 bits (532), Expect = 2.6e-54
Identity = 100/156 (64.10%), Postives = 123/156 (78.85%), Query Frame = 0


Query: 28  SEEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSCRLRWLNYLKPDI 87
           +EE +E R+GPWT+EEDTLL +YI+ +GEG+WNLLAK +GLKR GKSCRLRWLNYLKPDI
Sbjct: 12  NEEGAEQRKGPWTLEEDTLLTNYISHNGEGRWNLLAKSSGLKRAGKSCRLRWLNYLKPDI 71

Query: 88  KRGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKQLRQLKVQAHS 147
           KRGNLT QEQLLILELHSKWGNRWSKI++ LPGRTDN+IKNYWRTRVQKQ RQL + ++S
Sbjct: 72  KRGNLTPQEQLLILELHSKWGNRWSKISKYLPGRTDNDIKNYWRTRVQKQARQLNIDSNS 131

Query: 148 RKLLDAICH------LSMLEAMDQTSNYSINLPPSL 178
            K ++ +        ++ ++    T+N   N P  L
Sbjct: 132 HKFIEVVRSFWFPRLINEIKDNSYTNNIKANAPDLL 167

[Close]

BLAST of Carg12343-RA vs. TAIR10
Match: AT1G48000.1 (myb domain protein 112)

HSP 1 Score: 201.8 bits (512), Expect = 5.5e-52
Identity = 91/129 (70.54%), Postives = 108/129 (83.72%), Query Frame = 0


Query: 31  ESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSCRLRWLNYLKPDIKRG 90
           E E+RRGPWTVEED  L+ YI+ HGEG+WN L++ AGL RTGKSCRLRWLNYL+PDI+RG
Sbjct: 29  EIEIRRGPWTVEEDMKLVSYISLHGEGRWNSLSRSAGLNRTGKSCRLRWLNYLRPDIRRG 88

Query: 91  NLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKQLRQLKVQAHSRKL 150
           +++LQEQ +ILELHS+WGNRWSKIAQ LPGRTDNEIKNYWRTRVQK  + LK   +S++ 
Sbjct: 89  DISLQEQFIILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKLLKCDVNSKQF 148

Query: 151 LDAICHLSM 160
            D I HL M
Sbjct: 149 KDTIKHLWM 157

[Close]

BLAST of Carg12343-RA vs. TAIR10
Match: AT3G06490.1 (myb domain protein 108)

HSP 1 Score: 201.8 bits (512), Expect = 5.5e-52
Identity = 91/131 (69.47%), Postives = 113/131 (86.26%), Query Frame = 0


Query: 29  EEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSCRLRWLNYLKPDIK 88
           E+E +L+RGPWT EED  L++YIA +GEG+WN L++ AGL+RTGKSCRLRWLNYL+PD++
Sbjct: 14  EDEMDLKRGPWTAEEDFKLMNYIATNGEGRWNSLSRCAGLQRTGKSCRLRWLNYLRPDVR 73

Query: 89  RGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKQLRQLKVQAHSR 148
           RGN+TL+EQLLILELHS+WGNRWSKIAQ LPGRTDNEIKNYWRTRVQK  +QLK   +S+
Sbjct: 74  RGNITLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSQ 133

Query: 149 KLLDAICHLSM 160
           +  D + +L M
Sbjct: 134 QFKDTMKYLWM 144

[Close]

BLAST of Carg12343-RA vs. TAIR10
Match: AT5G49620.2 (myb domain protein 78)

HSP 1 Score: 198.7 bits (504), Expect = 4.6e-51
Identity = 97/157 (61.78%), Postives = 119/157 (75.80%), Query Frame = 0


Query: 29  EEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSCRLRWLNYLKPDIK 88
           EEE ++RRGPWTVEED  LI+YIA+HGEG+WN LA+ A LKRTGKSCRLRWLNYL+PD++
Sbjct: 21  EEEMDVRRGPWTVEEDLELINYIASHGEGRWNSLARCAELKRTGKSCRLRWLNYLRPDVR 80

Query: 89  RGNLTLQEQLLILELHSKWGN--------------RWSKIAQQLPGRTDNEIKNYWRTRV 148
           RGN+TL+EQLLILELH++WGN              RWSKIAQ LPGRTDNEIKNYWRTRV
Sbjct: 81  RGNITLEEQLLILELHTRWGNSNEFDHKFSSSCEDRWSKIAQYLPGRTDNEIKNYWRTRV 140

Query: 149 QKQLRQLKVQAHSRKLLDAICHLSMLEAMDQTSNYSI 172
           QK  +QLK   +S++  D + +L M   +++    SI
Sbjct: 141 QKHAKQLKCDVNSQQFKDTMKYLWMPRLVERIQAASI 177

[Close]

BLAST of Carg12343-RA vs. Swiss-Prot
Match: sp|Q9C9G7|MYB62_ARATH (Transcription factor MYB62 OS=Arabidopsis thaliana OX=3702 GN=MYB62 PE=2 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.5e-54
Identity = 100/125 (80.00%), Postives = 112/125 (89.60%), Query Frame = 0


Query: 30  EESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSCRLRWLNYLKPDIKR 89
           E+ ELRRGPWT+EEDTLL +YI  +GEG+WN +AK AGLKRTGKSCRLRWLNYLKPDI+R
Sbjct: 15  EDEELRRGPWTLEEDTLLTNYILHNGEGRWNHVAKCAGLKRTGKSCRLRWLNYLKPDIRR 74

Query: 90  GNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKQLRQLKVQAHSRK 149
           GNLT QEQLLILELHSKWGNRWSKIAQ LPGRTDNEIKNYWRTRVQKQ RQL ++++S K
Sbjct: 75  GNLTPQEQLLILELHSKWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQARQLNIESNSDK 134

Query: 150 LLDAI 155
             DA+
Sbjct: 135 FFDAV 139

[Close]

BLAST of Carg12343-RA vs. Swiss-Prot
Match: sp|Q10MB4|MYB2_ORYSJ (Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 7.3e-54
Identity = 100/135 (74.07%), Postives = 116/135 (85.93%), Query Frame = 0


Query: 28  SEEE---SELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSCRLRWLNYLK 87
           SEEE    +LRRGPWTVEED LL++YIAAHGEG+WN LA+ AGLKRTGKSCRLRWLNYL+
Sbjct: 11  SEEEVMGGDLRRGPWTVEEDLLLVNYIAAHGEGRWNSLARSAGLKRTGKSCRLRWLNYLR 70

Query: 88  PDIKRGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKQLRQLKVQ 147
           PD++RGN+T QEQLLILELHS+WGNRWSKIAQ LPGRTDNEIKNYWRTRVQK  +QLK  
Sbjct: 71  PDLRRGNITPQEQLLILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKQLKCD 130

Query: 148 AHSRKLLDAICHLSM 160
            +S++  D + +L M
Sbjct: 131 VNSQQFKDVMRYLWM 145

[Close]

BLAST of Carg12343-RA vs. Swiss-Prot
Match: sp|Q9FGY3|MYB78_ARATH (Transcription factor MYB78 OS=Arabidopsis thaliana OX=3702 GN=MYB78 PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.1e-52
Identity = 97/143 (67.83%), Postives = 119/143 (83.22%), Query Frame = 0


Query: 29  EEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSCRLRWLNYLKPDIK 88
           EEE ++RRGPWTVEED  LI+YIA+HGEG+WN LA+ A LKRTGKSCRLRWLNYL+PD++
Sbjct: 21  EEEMDVRRGPWTVEEDLELINYIASHGEGRWNSLARCAELKRTGKSCRLRWLNYLRPDVR 80

Query: 89  RGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKQLRQLKVQAHSR 148
           RGN+TL+EQLLILELH++WGNRWSKIAQ LPGRTDNEIKNYWRTRVQK  +QLK   +S+
Sbjct: 81  RGNITLEEQLLILELHTRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSQ 140

Query: 149 KLLDAICHLSMLEAMDQTSNYSI 172
           +  D + +L M   +++    SI
Sbjct: 141 QFKDTMKYLWMPRLVERIQAASI 163

[Close]

BLAST of Carg12343-RA vs. Swiss-Prot
Match: sp|Q2QZJ8|JAMYB_ORYSJ (Transcription factor JAMYB OS=Oryza sativa subsp. japonica OX=39947 GN=JAMYB PE=2 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.4e-52
Identity = 103/168 (61.31%), Postives = 124/168 (73.81%), Query Frame = 0


Query: 15  PMAGVSNTAAHRPSEEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKS 74
           P+ G    AA   S   +ELRRGPWTV+ED  LI+YI+ HGEG+WN LA+ AGLKRTGKS
Sbjct: 12  PVPGEQQEAAAELS--SAELRRGPWTVDEDLTLINYISDHGEGRWNALARAAGLKRTGKS 71

Query: 75  CRLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRV 134
           CRLRWLNYL+PD+KRGN T +EQLLIL+LHS+WGNRWSKIAQ LPGRTDNEIKNYWRTRV
Sbjct: 72  CRLRWLNYLRPDVKRGNFTAEEQLLILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRV 131

Query: 135 QKQLRQLKVQAHSRKLLDAICHLSM----------LEAMDQTSNYSIN 173
           QK  +QL    +S++  DA+ +L M            A+D + +YS N
Sbjct: 132 QKHAKQLNCDVNSKRFKDAMKYLWMPRLAERIHARAGAVDDSGDYSNN 177

[Close]

BLAST of Carg12343-RA vs. Swiss-Prot
Match: sp|Q9LDE1|MY108_ARATH (Transcription factor MYB108 OS=Arabidopsis thaliana OX=3702 GN=MYB108 PE=1 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 9.9e-51
Identity = 91/131 (69.47%), Postives = 113/131 (86.26%), Query Frame = 0


Query: 29  EEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSCRLRWLNYLKPDIK 88
           E+E +L+RGPWT EED  L++YIA +GEG+WN L++ AGL+RTGKSCRLRWLNYL+PD++
Sbjct: 14  EDEMDLKRGPWTAEEDFKLMNYIATNGEGRWNSLSRCAGLQRTGKSCRLRWLNYLRPDVR 73

Query: 89  RGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKQLRQLKVQAHSR 148
           RGN+TL+EQLLILELHS+WGNRWSKIAQ LPGRTDNEIKNYWRTRVQK  +QLK   +S+
Sbjct: 74  RGNITLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSQ 133

Query: 149 KLLDAICHLSM 160
           +  D + +L M
Sbjct: 134 QFKDTMKYLWM 144

[Close]

BLAST of Carg12343-RA vs. TrEMBL
Match: tr|A0A1S3C718|A0A1S3C718_CUCME (myb-related protein 305-like OS=Cucumis melo OX=3656 GN=LOC103497203 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 2.8e-98
Identity = 188/277 (67.87%), Postives = 213/277 (76.90%), Query Frame = 0


Query: 13  LVPMAGVSNTAAHRPS---EEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLK 72
           ++ MA +S  + +  +   EE SELRRGPWT+EEDTLLI YIA HGEGQWN+LAKQAGLK
Sbjct: 1   MISMANLSTKSENYKNANEEEISELRRGPWTIEEDTLLIRYIAGHGEGQWNILAKQAGLK 60

Query: 73  RTGKSCRLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNY 132
           RTGKSCRLRWLNYLKPD+KRGNLTLQEQLLILELHSKWGNRWSKIAQ LPGRTDNEIKNY
Sbjct: 61  RTGKSCRLRWLNYLKPDVKRGNLTLQEQLLILELHSKWGNRWSKIAQHLPGRTDNEIKNY 120

Query: 133 WRTRVQKQLRQLKVQAHSRKLLDAICHLSMLEAMDQTSNYSINLPP--SLHNMNLPNSXX 192
           WRTRVQKQLRQLKV+A+S++ LDAI HLSMLEAMDQ+SN+S+N PP  +L N   PNS  
Sbjct: 121 WRTRVQKQLRQLKVEANSKRFLDAIHHLSMLEAMDQSSNFSLNFPPPSALQNTTSPNS-F 180

Query: 193 XXXXXXXXXXXXXXXXXXXXSVQQWPEISTWPPSPCGEFMEAWRFDMVE-QKQLHEPVGA 252
                               S  QWP+IS  PPS CGEF EAWR +MVE QKQ  EPV +
Sbjct: 181 ETAIHPFNDHGGGAPLRAPCSASQWPDISQPPPSSCGEFGEAWRLNMVEMQKQKQEPVCS 240

Query: 253 LGDWEVGDRDAQMIAPDWVLEDAMVENLWSL-DHHLI 283
           LG WE+ D D  M APDW++ED+MVENLWSL D +LI
Sbjct: 241 LGAWEIEDCDVPMAAPDWLMEDSMVENLWSLEDQNLI 276

[Close]

BLAST of Carg12343-RA vs. TrEMBL
Match: tr|D6PT03|D6PT03_ROSRU (Putative MYB transcription factor OS=Rosa rugosa OX=74645 GN=MYB4 PE=2 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 8.4e-63
Identity = 138/296 (46.62%), Postives = 181/296 (61.15%), Query Frame = 0


Query: 16  MAGVSNTAAHRPSEEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSC 75
           MAGV+++    P+EEE+E+R+GPWT++EDTLLIHYIA HGEG WN LAK AGLKRTGKSC
Sbjct: 1   MAGVADSEYTSPNEEENEMRKGPWTLDEDTLLIHYIANHGEGHWNALAKCAGLKRTGKSC 60

Query: 76  RLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQ 135
           RLRWLNYLKPDIKRGNLT QEQLLILELH+KWGNRWSKIAQ LPGRTDNEIKNYWRTRVQ
Sbjct: 61  RLRWLNYLKPDIKRGNLTPQEQLLILELHAKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQ 120

Query: 136 KQLRQLKVQAHSRKLLDAI-CHL--SMLEAMDQTSNYSINLP-----------------P 195
           KQ RQL ++++S++ LDA+ C    ++ + M+QTS+ S++ P                 P
Sbjct: 121 KQARQLNIESNSKRFLDAVRCFWMPTLRQKMEQTSSLSLDPPSSSSSHSNYLTSQISIAP 180

Query: 196 SL----HNMNLPNSXXXXXXXXXXXXXXXXXXXXXXS-------VQQWPEISTWPPSPCG 255
           SL       ++P+S                      +       + Q P+I+  P S   
Sbjct: 181 SLSTSPQTCSVPSSPPSKVVSHVSDYSPIGTSSPSHNSLSSDSLISQLPQITEQPASSSY 240

Query: 256 EF---MEAWRFDMVEQKQLHEPVGALGDWEVGDRDAQMIAPDWVLEDAMVENLWSL 278
            F    + +  D   +    +PV  +  ++    D QM   DW+  + M + LW++
Sbjct: 241 AFEALNDNYYVDYDMEGFSLDPVSEMATFDTSQFDCQMAESDWIPSNYMTDTLWNM 296

[Close]

BLAST of Carg12343-RA vs. TrEMBL
Match: tr|A0A2P6R1M6|A0A2P6R1M6_ROSCH (Putative transcription factor MYB-HB-like family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0434891 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 7.1e-62
Identity = 138/296 (46.62%), Postives = 179/296 (60.47%), Query Frame = 0


Query: 16  MAGVSNTAAHRPSEEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSC 75
           MAGV+N+    P+EEE+E+R+GPWT++EDTLLIHYIA HGEG WN LAK AGLKRTGKSC
Sbjct: 1   MAGVANSVYTCPNEEENEMRKGPWTLDEDTLLIHYIANHGEGHWNALAKCAGLKRTGKSC 60

Query: 76  RLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQ 135
           RLRWLNYLKPDIKRGNLT QEQLLILELH+KWGNRWSKIAQ LPGRTDNEIKNYWRTRVQ
Sbjct: 61  RLRWLNYLKPDIKRGNLTPQEQLLILELHAKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQ 120

Query: 136 KQLRQLKVQAHSRKLLDAI-CHL--SMLEAMDQTSNYSINLP-----------------P 195
           KQ RQL +++ S++ LDA+ C    ++ + M+QTS+ S++ P                 P
Sbjct: 121 KQARQLNIESDSKRFLDAVRCFWMPTLRQKMEQTSSLSLDPPSSSSSHSNYLTSQISIAP 180

Query: 196 SL----HNMNLPNSXXXXXXXXXXXXXXXXXXXXXXS-------VQQWPEISTWPPSPCG 255
           SL       ++P+S                      +       + Q P+I+  P S   
Sbjct: 181 SLSTSTQTCSVPSSPPSKVVSHVSDYSPIGTSSPSHNSLSSDSLISQLPQITEQPASSSY 240

Query: 256 EF---MEAWRFDMVEQKQLHEPVGALGDWEVGDRDAQMIAPDWVLEDAMVENLWSL 278
            F    + +  D   +    +PV  +  ++    D QM    W+  + M + LW++
Sbjct: 241 AFEALNDNYYMDYDMEGFSLDPVSEMVSFDTSQFDCQMAESYWIPSNYMTDTLWNM 296

[Close]

BLAST of Carg12343-RA vs. TrEMBL
Match: tr|A0A0A0KC91|A0A0A0KC91_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G040640 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 7.1e-62
Identity = 142/266 (53.38%), Postives = 164/266 (61.65%), Query Frame = 0


Query: 31  ESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSCRLRWLNYLKPDIKRG 90
           E+E+RRGPWT++EDTLL HYIA HGEG WN LAK AGLKRTGKSCRLRWLNYLKPDIKRG
Sbjct: 23  ENEVRRGPWTIDEDTLLTHYIACHGEGHWNNLAKYAGLKRTGKSCRLRWLNYLKPDIKRG 82

Query: 91  NLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKQLRQLKVQAHSRKL 150
           N T QEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRV+KQ +QL ++++S+K 
Sbjct: 83  NFTPQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVEKQAKQLNIESNSKKF 142

Query: 151 LDAICHL---SMLEAMDQ------TSNYSINLPPSLHNMNLPNSXXXXXXXXXXXXXXXX 210
           L+ +  L    +L+ MDQ      +SNYS   PPSL      NS                
Sbjct: 143 LETVRDLWIPRLLQKMDQKSSSPNSSNYS--PPPSLEETFYQNS-CGSSSSEATIEAKQT 202

Query: 211 XXXXXXSVQQWPEISTWPPSPCGEFMEA--------WRFDMVEQK--QLHEPVGALGDWE 270
                    QWPE S       G   +           F  V+Q   QL  P   LG   
Sbjct: 203 SIQSCGGYYQWPESSERASEEFGNNSDVQPLNNNNNGEFLHVDQLQIQLQHPFSLLGATC 262

Query: 271 VG-DRDAQMIAPDWVLEDAMVENLWS 277
            G + D QM A DWVL+D   E+LW+
Sbjct: 263 GGAEFDGQMAASDWVLQDDKSESLWN 285

[Close]

BLAST of Carg12343-RA vs. TrEMBL
Match: tr|M5XYM8|M5XYM8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G313300 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.6e-61
Identity = 149/309 (48.22%), Postives = 183/309 (59.22%), Query Frame = 0


Query: 16  MAGVSNTAAHRPSEEESELRRGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSC 75
           MA V+ +A + P+EEE ELRRGPWT+EEDTLLIHYIA+HGEG WN LAK AGLKRTGKSC
Sbjct: 1   MAAVTKSACN-PNEEEIELRRGPWTLEEDTLLIHYIASHGEGHWNSLAKCAGLKRTGKSC 60

Query: 76  RLRWLNYLKPDIKRGNLTLQEQLLILELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRVQ 135
           RLRWLNYLKPDIKRGNLT QEQL+ILELHSKWGNRWSKIAQ LPGRTDNEIKNYWRTRVQ
Sbjct: 61  RLRWLNYLKPDIKRGNLTPQEQLMILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQ 120

Query: 136 KQLRQLKVQAHSRKLLDAI-CHL--SMLEAMDQTSNYSINLPPSLHNMN----------- 195
           KQ RQL ++++S++ LDA+ C    ++L+ M+Q+S  S  LP +L + N           
Sbjct: 121 KQARQLNIESNSKRFLDAVRCFWMPTLLQKMEQSS--SSYLPTTLSSQNSASPSLSXXXX 180

Query: 196 -----LPNSXXXXXXXXXXXXXXXXXXXXXXS--------VQQWPEISTWPPSPCGEF-- 255
                LP S                               + Q P+ S    SP   F  
Sbjct: 181 XXSISLPTSPPSKVSQIFDHPINGNSSSVTSPSIFSSDSLISQLPQTSERLTSPTHAFDH 240

Query: 256 -----------------MEAWRFDMVEQKQLHEPVGALGDWEVGDRDAQMIAPDWVLEDA 279
                               + +DM E   L +P  A+ D++    D QM A DW+L D 
Sbjct: 241 TVYSSSPALNDCYYVDTSSGYAYDM-EGPNL-DPASAICDFDNQQFDCQMTAGDWML-DN 300

The following BLAST results are available for this feature:

BLAST of Carg12343-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022998167.1	1.1e-135	95.88	transcription factor MYB24-like [Cucurbita maxima]	[more]
XP_023523160.1	1.5e-135	93.66	transcription factor MYB62-like [Cucurbita pepo subsp. pepo]	[more]
XP_022949509.1	4.3e-135	97.01	transcription factor MYB62-like [Cucurbita moschata]	[more]
XP_004151034.2	4.0e-101	69.31	PREDICTED: myb-related protein 305-like [Cucumis sativus]	[more]
XP_008457536.1	4.2e-98	67.87	PREDICTED: myb-related protein 305-like [Cucumis melo]	[more]

BLAST of Carg12343-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68320.1	8.2e-56	80.00	myb domain protein 62	[more]
AT1G25340.1	2.6e-54	64.10	myb domain protein 116	[more]
AT1G48000.1	5.5e-52	70.54	myb domain protein 112	[more]
AT3G06490.1	5.5e-52	69.47	myb domain protein 108	[more]
AT5G49620.2	4.6e-51	61.78	myb domain protein 78	[more]

BLAST of Carg12343-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9C9G7\|MYB62_ARATH	1.5e-54	80.00	Transcription factor MYB62 OS=Arabidopsis thaliana OX=3702 GN=MYB62 PE=2 SV=1	[more]
sp\|Q10MB4\|MYB2_ORYSJ	7.3e-54	74.07	Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 ...	[more]
sp\|Q9FGY3\|MYB78_ARATH	1.1e-52	67.83	Transcription factor MYB78 OS=Arabidopsis thaliana OX=3702 GN=MYB78 PE=2 SV=1	[more]
sp\|Q2QZJ8\|JAMYB_ORYSJ	1.4e-52	61.31	Transcription factor JAMYB OS=Oryza sativa subsp. japonica OX=39947 GN=JAMYB PE=...	[more]
sp\|Q9LDE1\|MY108_ARATH	9.9e-51	69.47	Transcription factor MYB108 OS=Arabidopsis thaliana OX=3702 GN=MYB108 PE=1 SV=1	[more]

BLAST of Carg12343-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C718\|A0A1S3C718_CUCME	2.8e-98	67.87	myb-related protein 305-like OS=Cucumis melo OX=3656 GN=LOC103497203 PE=4 SV=1	[more]
tr\|D6PT03\|D6PT03_ROSRU	8.4e-63	46.62	Putative MYB transcription factor OS=Rosa rugosa OX=74645 GN=MYB4 PE=2 SV=1	[more]
tr\|A0A2P6R1M6\|A0A2P6R1M6_ROSCH	7.1e-62	46.62	Putative transcription factor MYB-HB-like family OS=Rosa chinensis OX=74649 GN=R...	[more]
tr\|A0A0A0KC91\|A0A0A0KC91_CUCSA	7.1e-62	53.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G040640 PE=4 SV=1	[more]
tr\|M5XYM8\|M5XYM8_PRUPE	1.6e-61	48.22	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G313300 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg12343	Carg12343	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg12343-RA	Carg12343-RA-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg12343-RA.CDS.3	Carg12343-RA.CDS.3	CDS
Carg12343-RA.CDS.2	Carg12343-RA.CDS.2	CDS
Carg12343-RA.CDS.1	Carg12343-RA.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg12343-RA.five_prime_UTR.1	Carg12343-RA.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg12343-RA.exon.3	Carg12343-RA.exon.3	exon
Carg12343-RA.exon.2	Carg12343-RA.exon.2	exon
Carg12343-RA.exon.1	Carg12343-RA.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 88..136 e-value: 1.4E-13 score: 61.1 coord: 35..85 e-value: 6.5E-16 score: 68.9
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 36..83 e-value: 5.4E-17 score: 61.6 coord: 89..132 e-value: 3.4E-14 score: 52.6
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 104..132 e-value: 1.19545E-6 score: 43.7182
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 38..83 e-value: 1.94938E-11 score: 56.815
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 33..89 e-value: 2.5E-19 score: 70.9
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 92..152 e-value: 8.4E-17 score: 63.0
None	No IPR available	PANTHER	PTHR10641:SF510	MYB TRANSCRIPTION FACTOR	coord: 24..183
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 24..183
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 31..87 score: 24.889
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 88..138 score: 19.578
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 34..130