Carg18721 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACTCGATAGAAAAGGATAATCTGAACCTACGAAATAAGCGGTCTGGTTTTATTTCTGACGATGAAAATGAAGAATCGAGATGCCTTGGTACAATCAGAAGTGATGCTAACTTCAATGGGCTCCATGAAGAATACAGTGCAGCTTCTGGATTCCATCATTCCCAATTTCCAGATCCATCTGTCTCCTCTCATCCAAACCTTGCTGGATCCTTCTCTGATTCAATTTCATACACTGATATTGATTGGTCATTTGATGGCTCCCGATTGGGACTAAGCTCTCAAAAGTGGTCTCACAGCATTTATGCGAATCCCAAAAATAAGACAAATGCTTCTTTCCGTATCAGAAGTCCAGAACTTGCCAGTATTTGTAGAGTTCCAGCAAGAAGTCACGAAGCTGAAGGCATACATAGAGTAACAAACAATCATAATTTTCACTCCGCGGAATGTGAGGACCAAATCGATCTTAACATTACTGCAATTTGCAGTGCACTCCAACCTCATGGTTTAGAAGAACTAGATGCTGAAGCTTTAGATGTTGGATGTCAGACAAAAGCCACCACGGCTGTTAACAAGGCAGATAAGATCTCAGGCTTTAAAGACAATTCAGGGGATATTCCTAACCTTACAACCTTTCCTCAGAACTCTGTAGGAGTAAGATGTAGTAATTTTATTAATTTTAGTTTGCACCAATCATCTGTCTTCCAACCATCTATTATAGTTGGTGGGGATAACCCTTTTCCCACGCCAAGCTTTACAGATGATTCAGGTCTTACTCCTGCAGTAGTACAGGGCGATGAGGATATCCTCAACTCACTTAAAAATGCTCCTCCTCCTACGACAGAATCTGTTAACAGCAAAATTGAGCTATCCTCACAATGCTGGTTTACTGACTTAGAATCTTGTTTGCTTAGAAGGGATCAAAGTCAGCGGCCTTCTGAACAGAAATCTCATCCTGATGTTAGGAACTTCGCATCTGAATTTCCAACATTTGCTCCTTCCCTTGGGATCTCTGCAACCATCTCTGTTCCAGATCAGTCAGGTAAGAGAGATGGATACTTTAGTGGTAGTTTCATTTTGTTTAACCTTGTATGCCATTTAGGAATGTTCTTAAACAATTTTAGCATAAATGATTATCAATTTTGACGTTGAACATGTTTCTTTATTGCTTGCAGTTGAGCTTGTTCAATCTGCTGGCCCGTCTCAACCTCCCCAAAACGTTGGCAACGCTCTCGCTTCTGGTACCACTTTTATTGTATTTATTATGATCTCGTCTTCAATTAACAGTTCCATTAAGTAATTATATGGAAGGAGGAATAACTTTAAGCTTGACAAGTTTCAGGAAATCAAGATGCAAAAGAATTTGGGACAGTTGAAGATTCTGGTATTGCTAAATCAAATCCTAATCCACCGGTGTTCGCTTCTTCCCCGGTCTCGGCAAATACTGACATATCATTCAAAGCCCATCTTGCGCAGGTTCTATCTGTCTCTGTCTCACCTGATATAACTTCACATGTTGTAATTCAACCTCAGAAAACCGAAATTGACCCAAATCAGGTTTACCAACCAATCATAAGTGAGAGCGTTCCACTTGTTTCTTCCAAGTTTGAAGATCTACGAGATCGTTCTTTCCGACGCTCAAGGACCTCACGTTGTTACATAAAATGCCGAGGTACTTCTGTATCATATATTTAAACGTATTCTTTTTTTCTCATATTTGTTCATATGCTTGAAAATATTATAGATGTTATTTTTTTCATACTTACGTGCGGTAGCTTAAGAACAAGCACTTGAAATTAAAAAGTCAAAAGTCTTAAGATTTTGGTCTGCTTGGTGATTTATGAATTTATTGGTGATTTAATACTATCTGGCTGTAGTTTATTTTATTTTATTCAAAAAAATTTATTTATGTTGGCGGTATGAGTACTAGATTTGTCGTTTTTAGCAGAAAAAGACTACAAATTAGCAGAATAGAAGCTCTAATTTCAATAGAGTATCTTCATAGGTGTCACATACAGACATGAAATCAAATACATTTGTACAAATGATTTAGTGGGTCTTATCGTTTCAGATGTCATTTTTAAGTTTTGAACACTTGCATGGCTTCGTTCAGACACACCCGGACATGTATTAGAAAACAACCGACAAAATTGTAGAAAAGCCACACTGGACCAGTCCACTAACGCATTAGAAACTAATCAGAACTGAGAGATGCACAATTAAACAACAAAGGCAAATCAATATCAAATTAAAGGACATATGAAACAAAACCAACAAACCATGAACAATTGGGTTTCTTAAAGAGAACCCACAGAATCAATGAAGGCAAATTATAGTTGGACCACTGATCTGGGCTGCAAAAATGGGTGTAGACAGGATGCATCGTATTTTTCCTTTTTATACTTCTATTTAGCTTTGTGAGTTTAATTCTTAACTTTACCAGTGAGTTACACAAATTTCAACCAATATGATACAAAATTGAAGTATAAAAATTCTCAAACCAACCACGAAAACACTTCAAAATAATAATAATAATAATAATTATTATTATTATTATTATTATGATCTTTGTAGCATGAATAGGAATACTTTGACAGAAGCAAAAGGCTTATATGAACCTTAACTGGGTAACTGTGAGATCTATACCCATATATTATCAAGTTGTGATATTCAATTTCGTTTGCAGATCTAGACCAAACTCCCAAATTAAGTGGAGAGAGATGCTTCATATGTAAGAGGGATCTTTCATTCAAACCAGAAGGCTCACTTATCCTTCCAAAAATTCCACCAACTGTGGCAGTACTGCCATGTAGCCACGTGTTTCATGGCCTCTGTTTGGAACGCGTCACTCCTCAAAACCAAGCTGAAGATCCTCCCTGTCTTCCTTGTGCTGTTGGCGACACTTGATTTCTGCAAACCATTGGGTTAGTCACTCATCACCTCTCATTTATTTTTATCAGATTGAAATTCTTTAACTGGGTTTAACTTTGTATATACGTAGGCTAATTACCACTTAATTTTTTGCTCTCAACTGCACTAATTTTTCTCCCGGGTAAGAACATTCTTTCATTGCCAATTCTCCAAGTACTCGGATGTATTCGGATTTTCTCACTTTATGTTGGTTAATTTTATTTATTCTTATGTTTAAATCTTTCGTTTGATTTGATATATTAAAGGCTTCTGGCAATTGACAGCATTCAGTGGGTTTAAAACTGAAATCCAAACCATAATGGACCGAACCAGCCAAGAATCGAACTGATCGGTTTTTTAGACACTGGT ATGGACTCGATAGAAAAGGATAATCTGAACCTACGAAATAAGCGGTCTGGTTTTATTTCTGACGATGAAAATGAAGAATCGAGATGCCTTGGTACAATCAGAAGTGATGCTAACTTCAATGGGCTCCATGAAGAATACAGTGCAGCTTCTGGATTCCATCATTCCCAATTTCCAGATCCATCTGTCTCCTCTCATCCAAACCTTGCTGGATCCTTCTCTGATTCAATTTCATACACTGATATTGATTGGTCATTTGATGGCTCCCGATTGGGACTAAGCTCTCAAAAGTGGTCTCACAGCATTTATGCGAATCCCAAAAATAAGACAAATGCTTCTTTCCGTATCAGAAGTCCAGAACTTGCCAGTATTTGTAGAGTTCCAGCAAGAAGTCACGAAGCTGAAGGCATACATAGAGTAACAAACAATCATAATTTTCACTCCGCGGAATGTGAGGACCAAATCGATCTTAACATTACTGCAATTTGCAGTGCACTCCAACCTCATGGTTTAGAAGAACTAGATGCTGAAGCTTTAGATGTTGGATGTCAGACAAAAGCCACCACGGCTGTTAACAAGGCAGATAAGATCTCAGGCTTTAAAGACAATTCAGGGGATATTCCTAACCTTACAACCTTTCCTCAGAACTCTGTAGGAGTAAGATGTAGTAATTTTATTAATTTTAGTTTGCACCAATCATCTGTCTTCCAACCATCTATTATAGTTGGTGGGGATAACCCTTTTCCCACGCCAAGCTTTACAGATGATTCAGGTCTTACTCCTGCAGTAGTACAGGGCGATGAGGATATCCTCAACTCACTTAAAAATGCTCCTCCTCCTACGACAGAATCTGTTAACAGCAAAATTGAGCTATCCTCACAATGCTGGTTTACTGACTTAGAATCTTGTTTGCTTAGAAGGGATCAAAGTCAGCGGCCTTCTGAACAGAAATCTCATCCTGATGTTAGGAACTTCGCATCTGAATTTCCAACATTTGCTCCTTCCCTTGGGATCTCTGCAACCATCTCTGTTCCAGATCAGTCAGTTGAGCTTGTTCAATCTGCTGGCCCGTCTCAACCTCCCCAAAACGTTGGCAACGCTCTCGCTTCTGGAAATCAAGATGCAAAAGAATTTGGGACAGTTGAAGATTCTGGTATTGCTAAATCAAATCCTAATCCACCGGTGTTCGCTTCTTCCCCGGTCTCGGCAAATACTGACATATCATTCAAAGCCCATCTTGCGCAGGTTCTATCTGTCTCTGTCTCACCTGATATAACTTCACATGTTGTAATTCAACCTCAGAAAACCGAAATTGACCCAAATCAGGTTTACCAACCAATCATAAGTGAGAGCGTTCCACTTGTTTCTTCCAAGTTTGAAGATCTACGAGATCGTTCTTTCCGACGCTCAAGGACCTCACGTTGTTACATAAAATGCCGAGATCTAGACCAAACTCCCAAATTAAGTGGAGAGAGATGCTTCATATGTAAGAGGGATCTTTCATTCAAACCAGAAGGCTCACTTATCCTTCCAAAAATTCCACCAACTGTGGCAGTACTGCCATGTAGCCACGTGTTTCATGGCCTCTGTTTGGAACGCGTCACTCCTCAAAACCAAGCTGAAGATCCTCCCTGTCTTCCTTGTGCTGTTGGCGACACTTGATTTCTGCAAACCATTGGGTTAGTCACTCATCACCTCTCATTTATTTTTATCAGATTGAAATTCTTTAACTGGGTTTAACTTTGTATATACGTAGGCTAATTACCACTTAATTTTTTGCTCTCAACTGCACTAATTTTTCTCCCGGGTAAGAACATTCTTTCATTGCCAATTCTCCAAGTACTCGGATGTATTCGGATTTTCTCACTTTATGTTGGTTAATTTTATTTATTCTTATGTTTAAATCTTTCGTTTGATTTGATATATTAAAGGCTTCTGGCAATTGACAGCATTCAGTGGGTTTAAAACTGAAATCCAAACCATAATGGACCGAACCAGCCAAGAATCGAACTGATCGGTTTTTTAGACACTGGT ATGGACTCGATAGAAAAGGATAATCTGAACCTACGAAATAAGCGGTCTGGTTTTATTTCTGACGATGAAAATGAAGAATCGAGATGCCTTGGTACAATCAGAAGTGATGCTAACTTCAATGGGCTCCATGAAGAATACAGTGCAGCTTCTGGATTCCATCATTCCCAATTTCCAGATCCATCTGTCTCCTCTCATCCAAACCTTGCTGGATCCTTCTCTGATTCAATTTCATACACTGATATTGATTGGTCATTTGATGGCTCCCGATTGGGACTAAGCTCTCAAAAGTGGTCTCACAGCATTTATGCGAATCCCAAAAATAAGACAAATGCTTCTTTCCGTATCAGAAGTCCAGAACTTGCCAGTATTTGTAGAGTTCCAGCAAGAAGTCACGAAGCTGAAGGCATACATAGAGTAACAAACAATCATAATTTTCACTCCGCGGAATGTGAGGACCAAATCGATCTTAACATTACTGCAATTTGCAGTGCACTCCAACCTCATGGTTTAGAAGAACTAGATGCTGAAGCTTTAGATGTTGGATGTCAGACAAAAGCCACCACGGCTGTTAACAAGGCAGATAAGATCTCAGGCTTTAAAGACAATTCAGGGGATATTCCTAACCTTACAACCTTTCCTCAGAACTCTGTAGGAGTAAGATGTAGTAATTTTATTAATTTTAGTTTGCACCAATCATCTGTCTTCCAACCATCTATTATAGTTGGTGGGGATAACCCTTTTCCCACGCCAAGCTTTACAGATGATTCAGGTCTTACTCCTGCAGTAGTACAGGGCGATGAGGATATCCTCAACTCACTTAAAAATGCTCCTCCTCCTACGACAGAATCTGTTAACAGCAAAATTGAGCTATCCTCACAATGCTGGTTTACTGACTTAGAATCTTGTTTGCTTAGAAGGGATCAAAGTCAGCGGCCTTCTGAACAGAAATCTCATCCTGATGTTAGGAACTTCGCATCTGAATTTCCAACATTTGCTCCTTCCCTTGGGATCTCTGCAACCATCTCTGTTCCAGATCAGTCAGTTGAGCTTGTTCAATCTGCTGGCCCGTCTCAACCTCCCCAAAACGTTGGCAACGCTCTCGCTTCTGGAAATCAAGATGCAAAAGAATTTGGGACAGTTGAAGATTCTGGTATTGCTAAATCAAATCCTAATCCACCGGTGTTCGCTTCTTCCCCGGTCTCGGCAAATACTGACATATCATTCAAAGCCCATCTTGCGCAGGTTCTATCTGTCTCTGTCTCACCTGATATAACTTCACATGTTGTAATTCAACCTCAGAAAACCGAAATTGACCCAAATCAGGTTTACCAACCAATCATAAGTGAGAGCGTTCCACTTGTTTCTTCCAAGTTTGAAGATCTACGAGATCGTTCTTTCCGACGCTCAAGGACCTCACGTTGTTACATAAAATGCCGAGATCTAGACCAAACTCCCAAATTAAGTGGAGAGAGATGCTTCATATGTAAGAGGGATCTTTCATTCAAACCAGAAGGCTCACTTATCCTTCCAAAAATTCCACCAACTGTGGCAGTACTGCCATGTAGCCACGTGTTTCATGGCCTCTGTTTGGAACGCGTCACTCCTCAAAACCAAGCTGAAGATCCTCCCTGTCTTCCTTGTGCTGTTGGCGACACTTGA MDSIEKDNLNLRNKRSGFISDDENEESRCLGTIRSDANFNGLHEEYSAASGFHHSQFPDPSVSSHPNLAGSFSDSISYTDIDWSFDGSRLGLSSQKWSHSIYANPKNKTNASFRIRSPELASICRVPARSHEAEGIHRVTNNHNFHSAECEDQIDLNITAICSALQPHGLEELDAEALDVGCQTKATTAVNKADKISGFKDNSGDIPNLTTFPQNSVGVRCSNFINFSLHQSSVFQPSIIVGGDNPFPTPSFTDDSGLTPAVVQGDEDILNSLKNAPPPTTESVNSKIELSSQCWFTDLESCLLRRDQSQRPSEQKSHPDVRNFASEFPTFAPSLGISATISVPDQSVELVQSAGPSQPPQNVGNALASGNQDAKEFGTVEDSGIAKSNPNPPVFASSPVSANTDISFKAHLAQVLSVSVSPDITSHVVIQPQKTEIDPNQVYQPIISESVPLVSSKFEDLRDRSFRRSRTSRCYIKCRDLDQTPKLSGERCFICKRDLSFKPEGSLILPKIPPTVAVLPCSHVFHGLCLERVTPQNQAEDPPCLPCAVGDT
BLAST of Carg18721 vs. NCBI nr
Match: XP_023547724.1 (uncharacterized protein LOC111806582 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 1084.3 bits (2803), Expect = 0.0e+00 Identity = 542/552 (98.19%), Postives = 547/552 (99.09%), Query Frame = 0
BLAST of Carg18721 vs. NCBI nr
Match: XP_022991862.1 (uncharacterized protein LOC111488380 isoform X2 [Cucurbita maxima]) HSP 1 Score: 1080.5 bits (2793), Expect = 0.0e+00 Identity = 538/552 (97.46%), Postives = 547/552 (99.09%), Query Frame = 0
BLAST of Carg18721 vs. NCBI nr
Match: XP_022953871.1 (uncharacterized protein LOC111456279 isoform X2 [Cucurbita moschata]) HSP 1 Score: 1080.1 bits (2792), Expect = 0.0e+00 Identity = 542/552 (98.19%), Postives = 545/552 (98.73%), Query Frame = 0
BLAST of Carg18721 vs. NCBI nr
Match: XP_023547723.1 (uncharacterized protein LOC111806582 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 1079.3 bits (2790), Expect = 0.0e+00 Identity = 542/554 (97.83%), Postives = 547/554 (98.74%), Query Frame = 0
BLAST of Carg18721 vs. NCBI nr
Match: XP_022991860.1 (uncharacterized protein LOC111488380 isoform X1 [Cucurbita maxima]) HSP 1 Score: 1075.5 bits (2780), Expect = 0.0e+00 Identity = 538/554 (97.11%), Postives = 547/554 (98.74%), Query Frame = 0
BLAST of Carg18721 vs. TAIR10
Match: AT5G18260.1 (RING/U-box superfamily protein) HSP 1 Score: 54.3 bits (129), Expect = 2.8e-07 Identity = 25/65 (38.46%), Postives = 36/65 (55.38%), Query Frame = 0
BLAST of Carg18721 vs. TAIR10
Match: AT4G39140.1 (RING/U-box superfamily protein) HSP 1 Score: 49.3 bits (116), Expect = 8.9e-06 Identity = 24/63 (38.10%), Postives = 33/63 (52.38%), Query Frame = 0
BLAST of Carg18721 vs. TAIR10
Match: AT2G21500.2 (RING/U-box superfamily protein) HSP 1 Score: 47.8 bits (112), Expect = 2.6e-05 Identity = 26/67 (38.81%), Postives = 34/67 (50.75%), Query Frame = 0
BLAST of Carg18721 vs. TrEMBL
Match: tr|A0A0A0K9Y2|A0A0A0K9Y2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G430810 PE=4 SV=1) HSP 1 Score: 713.4 bits (1840), Expect = 4.0e-202 Identity = 374/554 (67.51%), Postives = 420/554 (75.81%), Query Frame = 0
BLAST of Carg18721 vs. TrEMBL
Match: tr|A0A1S3CE69|A0A1S3CE69_CUCME (uncharacterized protein LOC103499862 OS=Cucumis melo OX=3656 GN=LOC103499862 PE=4 SV=1) HSP 1 Score: 691.8 bits (1784), Expect = 1.2e-195 Identity = 372/596 (62.42%), Postives = 426/596 (71.48%), Query Frame = 0
BLAST of Carg18721 vs. TrEMBL
Match: tr|F6HBZ0|F6HBZ0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_09s0018g01740 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 1.4e-21 Identity = 43/78 (55.13%), Postives = 62/78 (79.49%), Query Frame = 0
BLAST of Carg18721 vs. TrEMBL
Match: tr|A0A2C9V0K7|A0A2C9V0K7_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G069100 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 4.1e-21 Identity = 92/293 (31.40%), Postives = 136/293 (46.42%), Query Frame = 0
BLAST of Carg18721 vs. TrEMBL
Match: tr|A0A251UX51|A0A251UX51_HELAN (Putative zinc finger, RING/FYVE/PHD-type OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr04g0100031 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 1.5e-20 Identity = 49/109 (44.95%), Postives = 69/109 (63.30%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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