Cp4.1LG12g07190 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG12g07190
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRING/U-box superfamily protein
LocationCp4.1LG12 : 7107712 .. 7111674 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGAGTGGAAACGAGATACAACTAACTACGAGGCGTGGAAGTGGAACCCACACCTGGAACGCCAAATTCCGCCTTGCCCCACTGTTTCATCACTCTCTTTCAGGTAATGCTAAAATTCTCCTTCTTCTCTTTCAATCCCGCTCCATTTCCTTTGATTCCTCTGAATTCTTCCGTGTTATGCACTCTCCTTCATGATTCCGATTCGTATATCACTTTTCTTTTTAATCGTTTTTCTTATCTTAGCTGCCGTTGCTGATTTGTATGGATTCGTGAGTTTTCCTCTATTTCTCTAGCGCGCTTGCATTGCTTCGATTTGGTTTAATTTCTGTGTTGTATTTGTTCATATATGTTGTGGATTTCTGAGTTTATTCATCTGAAATTGCTGTGTTTTGTTCATATTCTGTGATTGCATCATGGTGTTTGTCTCTGTTTGATGTTGCTAATGGAGTCGTATCGATCGATCGCGTAGAGCTGGTTTGGATTTTGATTTTGTAATATTTTTGTTCCTTGTTTTGAGATAAGTCGTTCGGACGAAGCGTGGTTTAAGTGGATCGGACGCTGTTTTTGGTGTTTCATTTGTGCAGTTTGTAACCGATCTTTTATTTGTGTTCGTTAATGCATTTGACGTCTCTTTCCGTTTTTGATTGAAATTGTGGTCTAAGCTTCTTTTCCTTTTCCTTTTGTGTAATGTGCTTTGTTCATGGAGATATTTAAAGCGACTTAAAAGACAAAGACCATTAATGCATATACTGCTTAATTATTATAACTGCACGTTGATGATTGCATTACCGAATTCAGTTTTCACCGAATTTCTATTCATATTTCATAATTCAATGATCGGCTGTGTTCTTGATTATTCGTCCGGAGACTGTCTTTCTAATTCCTGTTGTTCAGGATGGACTCGATGGAAAAGGATAATCTGAACCTACGAAGTAAGCTGTCTGGTTTTATTTCTGACGATGAAAATGAAGAATCGAGATGCCTTGGTACAATCAGAAGTGATGCTAACTTCAATGGGCTCCATGAAGAATACAGTGCAGCTTCTGGATTCCATCATTCCCAATTTCCAGATCCATCTGTCTCCTCTCATCCAAACCTTGCTGGATCCTTCTCTGATTCAATTTCATACACTGATATTGATTGGTCATTTGATGGCTCCCGATTGGGATTAAGCTCTCAAAAGTGGTCTCACAGCATTTATGCTAATCCCAAAAATAAGACAAATGCTTCTTTTAGTATCAGAAGTCCAGAACTTGCCAGTATTTGTAGAGTCCCAGCAAGAACTCACGAAGCTGAAGGCATACATAGAGTAACAAACAATCATAATTTTCACTCCGCGGAATGTGAGGACCAAATCGATCTTAACATTACTGCAATTTGCAGTGCACTCCAACCTCATGGTTTAGAAGAACTAGATGCTGAGGCTTTAGATGTTGGATGTCAGACAAAAGCCACCACGGCTGTTAACAAGGCAGATAAGATCTCAGGCTTTAAAGACAATTCAGGGGACATTCCTAACCTTACAACCTTTCCTCAGAACTCTGTAGGAGTAAGATGTAGTAATTTTATTAATTTTAGTTTGCACCAATCATCTGTATTCCAACCATCTATTATAGTTGGTGGGGATAACCCTTTTCCCACGCCAAGCTTTACAGATGATTCAGGTCTTACTCCTGCAGTAGTACAGAGCGATGAGGATATCCTCAACTCGCTTAAAAATGCTCCTCCTCCCACGACAGAATCTGTTAACAGCAAAATTGAGCTATCCTCACAATGCTGGTTTACTGACTTAGAATCTTGTTTGCTTAGAAGGGATCAAAGTCAGCGGCCTTCTGAACAGAAATCTCCTCCTGATGTTAGGAACTTCGCATCTGAATTTCCAACATTTGCTCCTTCCCTTGGGATCTCTGCAACCATCTCTGTTCCAGATCAGTCAGGTAAGAGAGATGGATACTTTAGTGGTAGTTTCATTTTGTTTAACCTTGTATGCTATTTAAGAATGTTCTTAAACAATTTTAGCATAAATGATTATCAATTTTGACGTTGAACATGTTTCTTTATTGCTTGCAGTTGAGCTTGTTCAATCTGCTGGCCCGTCTCAACCTCCCCAAAACGTTGGCAATGCTCTCGCTTCTGGTACCACTTTTATTGTCTTTATTATGATCTCGTCTTCAATTAACAGTTTCATTAAGTAATTATATGGAAGGAGGAATAACTTTAAGCTTGACAAGTTTCAGGAAATCAAGATGCAAGAGAATTTGGGACAGTTGAAGATTCTGGTATTGCTAAATCAAATCCTAATCCACCAGTGTTCACTTCTTCCCCGGTCTCGGCAAATACTGACATATCATTTCAAGCCCATCTTGCGCAGGTTCTATCTGTCTCTGTCTCACCTGATATAACTTCACATGTTGTAATTCAACCTCAGAAAACCGAAATTGACCCAAATCAGGTTTACCAACCAATCATTAGTGAGAGCGTTCCACTTGTTTCTTCCAAGTTTGAAGATCTACGAGATCGTTCTTTCCGACGCTCAAGGACCTCACGTTGTTACATAAAATGCCGAGGTACTTCTCTATTATATATTTAAACGTATTATTGTTTCTCATATTTGTTCATATGCTTGAAAATATTATAGATGTTAGTTTTTCATACTTACGTGCGGTAGCTTAAGAACAAGCACTTGAAATTAAAAAGTCAAAAGTCTTATGATTTTGGTCTGCTTGGTGGTTTATGAATTTATTGGTGATTTAATACTGTCTGGCTGTAGTTTATTTTATTTTATTAAAAAAATATATTTATGTTGGCGGTATGAGTACTAGATTTGTCGTTTTGGGCAGAAAAAGACTACAAATTAGCAGAATAGAAGCTCTAATTTCAATAGAGTATCTGCATAGGTGTCACATACAGACATGAAATCAAATACACGTTGAACAAATGATTTAGTGGGTCTTATCGTTTCAGATAGTTGTCATTTTTAAGTTTTGAACACTTGCATGGCTTCATTCAGACACACCCGGACATGTATTAGAAAACAACCGACAAAATTGTAGACAAGCCACACTGAACCAGTCTACTAACGCATTAGAAAATAATCAGAACTGAGAGATGCACTATTAAACAACAAAGGCAAATCAATATCAAACTAAAAAAGGACATATAAAACAAAACTAAGAAACCATGAACAATTGGGTTTCTTAAAGAGAACCCACAGAATCAATGAAGGCAAATTATAGTTGGACCACTGATCTGGGCTGCAAAAATGGGTGCAGCCAGGATGCATCGTATTTTTCTTTTTTATTCTTCTTTTTAGCTTTGTGAGTTTAATTCTTAACTTTACCAGTGAATTACACAAATTTCAACCAGTATGATACAAAATTGAAGTATAAAAATGCTCAACCCAACCACGAAAATACTTCAAAAAAAAAAAAAATTATTATTATTATGATCTTTGTAGCATGAATAGGAATACTTTGACAGAAGCAAAAGGCTTATATGAACATTTACTGGGTAAGTATGAGATCTATACCCATATATTATCAGGTGGTGATATTTAACTTCGATCATTTGCAGATTTGGATCAAACTCCCAAATTAAGTGGAGAGAGATGCTTCATATGTAAGAGGGATCTTTCATTCAAACCAGAAGGCTCACTTATCCTTCCAAAAATTCCACCAACTGTGGCAGTACTGCCATGTAGCCACGTGTTTCATGGCCTCTGTTTGGAACGCGTCACTCCTCAAAACCAAGCTGAAGATCCTCCCTGTCTTCCGTGTGCTGTTGGCGACACTTGATTTCTGCAAACCATTGGGGTTAGTCACTCATCACCTCTCATTTATTTTTCTCAGATTGAAATTCTTTAACAAGAATAACTTGAGATGGGTTTAACTTTGTATATACGTAGGCTAATTATCACTTAATTTTTTGCTCTCAACTGCACTAATTTTTCTCCCGGGTAAGAAC

mRNA sequence

GAGAGTGGAAACGAGATACAACTAACTACGAGGCGTGGAAGTGGAACCCACACCTGGAACGCCAAATTCCGCCTTGCCCCACTGTTTCATCACTCTCTTTCAGGATGGACTCGATGGAAAAGGATAATCTGAACCTACGAAGTAAGCTGTCTGGTTTTATTTCTGACGATGAAAATGAAGAATCGAGATGCCTTGGTACAATCAGAAGTGATGCTAACTTCAATGGGCTCCATGAAGAATACAGTGCAGCTTCTGGATTCCATCATTCCCAATTTCCAGATCCATCTGTCTCCTCTCATCCAAACCTTGCTGGATCCTTCTCTGATTCAATTTCATACACTGATATTGATTGGTCATTTGATGGCTCCCGATTGGGATTAAGCTCTCAAAAGTGGTCTCACAGCATTTATGCTAATCCCAAAAATAAGACAAATGCTTCTTTTAGTATCAGAAGTCCAGAACTTGCCAGTATTTGTAGAGTCCCAGCAAGAACTCACGAAGCTGAAGGCATACATAGAGTAACAAACAATCATAATTTTCACTCCGCGGAATGTGAGGACCAAATCGATCTTAACATTACTGCAATTTGCAGTGCACTCCAACCTCATGGTTTAGAAGAACTAGATGCTGAGGCTTTAGATGTTGGATGTCAGACAAAAGCCACCACGGCTGTTAACAAGGCAGATAAGATCTCAGGCTTTAAAGACAATTCAGGGGACATTCCTAACCTTACAACCTTTCCTCAGAACTCTGTAGGAGTAAGATGTAGTAATTTTATTAATTTTAGTTTGCACCAATCATCTGTATTCCAACCATCTATTATAGTTGGTGGGGATAACCCTTTTCCCACGCCAAGCTTTACAGATGATTCAGGTCTTACTCCTGCAGTAGTACAGAGCGATGAGGATATCCTCAACTCGCTTAAAAATGCTCCTCCTCCCACGACAGAATCTGTTAACAGCAAAATTGAGCTATCCTCACAATGCTGGTTTACTGACTTAGAATCTTGTTTGCTTAGAAGGGATCAAAGTCAGCGGCCTTCTGAACAGAAATCTCCTCCTGATGTTAGGAACTTCGCATCTGAATTTCCAACATTTGCTCCTTCCCTTGGGATCTCTGCAACCATCTCTGTTCCAGATCAGTCAGTTGAGCTTGTTCAATCTGCTGGCCCGTCTCAACCTCCCCAAAACGTTGGCAATGCTCTCGCTTCTGGAAATCAAGATGCAAGAGAATTTGGGACAGTTGAAGATTCTGGTATTGCTAAATCAAATCCTAATCCACCAGTGTTCACTTCTTCCCCGGTCTCGGCAAATACTGACATATCATTTCAAGCCCATCTTGCGCAGGTTCTATCTGTCTCTGTCTCACCTGATATAACTTCACATGTTGTAATTCAACCTCAGAAAACCGAAATTGACCCAAATCAGGTTTACCAACCAATCATTAGTGAGAGCGTTCCACTTGTTTCTTCCAAGTTTGAAGATCTACGAGATCGTTCTTTCCGACGCTCAAGGACCTCACGTTGTTACATAAAATGCCGAGATTTGGATCAAACTCCCAAATTAAGTGGAGAGAGATGCTTCATATGTAAGAGGGATCTTTCATTCAAACCAGAAGGCTCACTTATCCTTCCAAAAATTCCACCAACTGTGGCAGTACTGCCATGTAGCCACGTGTTTCATGGCCTCTGTTTGGAACGCGTCACTCCTCAAAACCAAGCTGAAGATCCTCCCTGTCTTCCGTGTGCTGTTGGCGACACTTGATTTCTGCAAACCATTGGGGTTAGTCACTCATCACCTCTCATTTATTTTTCTCAGATTGAAATTCTTTAACAAGAATAACTTGAGATGGGTTTAACTTTGTATATACGTAGGCTAATTATCACTTAATTTTTTGCTCTCAACTGCACTAATTTTTCTCCCGGGTAAGAAC

Coding sequence (CDS)

ATGGACTCGATGGAAAAGGATAATCTGAACCTACGAAGTAAGCTGTCTGGTTTTATTTCTGACGATGAAAATGAAGAATCGAGATGCCTTGGTACAATCAGAAGTGATGCTAACTTCAATGGGCTCCATGAAGAATACAGTGCAGCTTCTGGATTCCATCATTCCCAATTTCCAGATCCATCTGTCTCCTCTCATCCAAACCTTGCTGGATCCTTCTCTGATTCAATTTCATACACTGATATTGATTGGTCATTTGATGGCTCCCGATTGGGATTAAGCTCTCAAAAGTGGTCTCACAGCATTTATGCTAATCCCAAAAATAAGACAAATGCTTCTTTTAGTATCAGAAGTCCAGAACTTGCCAGTATTTGTAGAGTCCCAGCAAGAACTCACGAAGCTGAAGGCATACATAGAGTAACAAACAATCATAATTTTCACTCCGCGGAATGTGAGGACCAAATCGATCTTAACATTACTGCAATTTGCAGTGCACTCCAACCTCATGGTTTAGAAGAACTAGATGCTGAGGCTTTAGATGTTGGATGTCAGACAAAAGCCACCACGGCTGTTAACAAGGCAGATAAGATCTCAGGCTTTAAAGACAATTCAGGGGACATTCCTAACCTTACAACCTTTCCTCAGAACTCTGTAGGAGTAAGATGTAGTAATTTTATTAATTTTAGTTTGCACCAATCATCTGTATTCCAACCATCTATTATAGTTGGTGGGGATAACCCTTTTCCCACGCCAAGCTTTACAGATGATTCAGGTCTTACTCCTGCAGTAGTACAGAGCGATGAGGATATCCTCAACTCGCTTAAAAATGCTCCTCCTCCCACGACAGAATCTGTTAACAGCAAAATTGAGCTATCCTCACAATGCTGGTTTACTGACTTAGAATCTTGTTTGCTTAGAAGGGATCAAAGTCAGCGGCCTTCTGAACAGAAATCTCCTCCTGATGTTAGGAACTTCGCATCTGAATTTCCAACATTTGCTCCTTCCCTTGGGATCTCTGCAACCATCTCTGTTCCAGATCAGTCAGTTGAGCTTGTTCAATCTGCTGGCCCGTCTCAACCTCCCCAAAACGTTGGCAATGCTCTCGCTTCTGGAAATCAAGATGCAAGAGAATTTGGGACAGTTGAAGATTCTGGTATTGCTAAATCAAATCCTAATCCACCAGTGTTCACTTCTTCCCCGGTCTCGGCAAATACTGACATATCATTTCAAGCCCATCTTGCGCAGGTTCTATCTGTCTCTGTCTCACCTGATATAACTTCACATGTTGTAATTCAACCTCAGAAAACCGAAATTGACCCAAATCAGGTTTACCAACCAATCATTAGTGAGAGCGTTCCACTTGTTTCTTCCAAGTTTGAAGATCTACGAGATCGTTCTTTCCGACGCTCAAGGACCTCACGTTGTTACATAAAATGCCGAGATTTGGATCAAACTCCCAAATTAAGTGGAGAGAGATGCTTCATATGTAAGAGGGATCTTTCATTCAAACCAGAAGGCTCACTTATCCTTCCAAAAATTCCACCAACTGTGGCAGTACTGCCATGTAGCCACGTGTTTCATGGCCTCTGTTTGGAACGCGTCACTCCTCAAAACCAAGCTGAAGATCCTCCCTGTCTTCCGTGTGCTGTTGGCGACACTTGA

Protein sequence

MDSMEKDNLNLRSKLSGFISDDENEESRCLGTIRSDANFNGLHEEYSAASGFHHSQFPDPSVSSHPNLAGSFSDSISYTDIDWSFDGSRLGLSSQKWSHSIYANPKNKTNASFSIRSPELASICRVPARTHEAEGIHRVTNNHNFHSAECEDQIDLNITAICSALQPHGLEELDAEALDVGCQTKATTAVNKADKISGFKDNSGDIPNLTTFPQNSVGVRCSNFINFSLHQSSVFQPSIIVGGDNPFPTPSFTDDSGLTPAVVQSDEDILNSLKNAPPPTTESVNSKIELSSQCWFTDLESCLLRRDQSQRPSEQKSPPDVRNFASEFPTFAPSLGISATISVPDQSVELVQSAGPSQPPQNVGNALASGNQDAREFGTVEDSGIAKSNPNPPVFTSSPVSANTDISFQAHLAQVLSVSVSPDITSHVVIQPQKTEIDPNQVYQPIISESVPLVSSKFEDLRDRSFRRSRTSRCYIKCRDLDQTPKLSGERCFICKRDLSFKPEGSLILPKIPPTVAVLPCSHVFHGLCLERVTPQNQAEDPPCLPCAVGDT
BLAST of Cp4.1LG12g07190 vs. TrEMBL
Match: A0A0A0K9Y2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G430810 PE=4 SV=1)

HSP 1 Score: 739.2 bits (1907), Expect = 3.7e-210
Identity = 383/554 (69.13%), Postives = 430/554 (77.62%), Query Frame = 1

Query: 4   MEKDNLNLRSKLSGFISDDENEESRCLGTIRSDANFNGLHEEYSAASGFHHSQFPDPSVS 63
           ME DNL LR+ LS FISDDENEE  CL TIRSD NFN LHEEYS A+GFHHSQF DP VS
Sbjct: 1   MENDNLKLRNNLSDFISDDENEELGCLDTIRSDVNFNRLHEEYSTAAGFHHSQFSDPPVS 60

Query: 64  SHPNLAGSFSDSISYTDIDWSFDGSRLGLSSQKWSHSIYANPKNKTNASFSIRSPELASI 123
           S P  AGSFSD+ISYTDIDWSFD SRLGLSSQ WS +++ NP+NKTN SF +R+PEL+SI
Sbjct: 61  SRPKFAGSFSDTISYTDIDWSFDSSRLGLSSQNWSRNMFTNPENKTNTSFHVRNPELSSI 120

Query: 124 CRVPARTHEAEGIHRV-----TNNHNFHSAECEDQIDLNITAICSALQPHGLEELDAEAL 183
           CR P R+ EAEG+  +     TNNHN  S++CEDQIDLNI AICS  Q H L+E DAE+ 
Sbjct: 121 CRFPVRSQEAEGLDLIGCDTETNNHNLLSSKCEDQIDLNIAAICSGFQTHCLQEHDAESF 180

Query: 184 DVGCQTKATTAVNKADKISGFKDNSGDIPNLTTFPQNSVGVRCSNFINFSLHQSSVFQPS 243
           +VG  T  TTA+N+ DKISG+KDNSG+IPNLTTFPQNSVGVRCSNFINFSLH SSVFQPS
Sbjct: 181 NVGYHTNPTTALNRTDKISGYKDNSGNIPNLTTFPQNSVGVRCSNFINFSLHPSSVFQPS 240

Query: 244 IIVGGDNPFPTPSFTDDSGLTPAVVQSDEDILNSLKNAPPPTTESVNSKIELSSQCWFTD 303
           IIVGGDNPFP PS  DD  L+  VVQ +EDIL SL+NA P TTES+NS+I +SS+ WFTD
Sbjct: 241 IIVGGDNPFPRPSNEDD--LSADVVQCNEDILKSLRNAAPSTTESINSQIGISSRSWFTD 300

Query: 304 LESCLLRRDQSQRPSEQKSPPDVRNFASEFPTFAPSLGISATISVPDQSVELVQSAGPSQ 363
           LESCL R+DQSQ+P E+    DVRNF+SEFPT+APSLGIS TISVPDQSVE  QSAGPSQ
Sbjct: 301 LESCLHRKDQSQQPIEE---TDVRNFSSEFPTYAPSLGISTTISVPDQSVEHDQSAGPSQ 360

Query: 364 PPQNVGNALASGNQDAREFGTVEDSGIAKSNPNPPVFTSSPVSANTDISFQAHLAQVLSV 423
           PPQN GN+L +GNQDAREFGT EDSGIAK                   SFQAHLA     
Sbjct: 361 PPQNFGNSLTTGNQDAREFGTAEDSGIAK-------------------SFQAHLA----- 420

Query: 424 SVSPDITSHVVIQPQKTEIDPNQVYQPIISESVPLVSSKFEDLRDRSFRRSRTSRCYIKC 483
                                 QV QPII ES+PLVSSKFED  DRSF RSR+SRCYIKC
Sbjct: 421 ----------------------QVSQPIIDESIPLVSSKFEDQGDRSFERSRSSRCYIKC 480

Query: 484 RDLDQTPKLSGERCFICKRDLSFKPEGSLILPKIPPTVAVLPCSHVFHGLCLERVTPQNQ 543
           RDLDQTPKLSG+RC++CKRDLSFKPEGS+ +PKI PTVAVLPCSHVFHGLCLER+TPQNQ
Sbjct: 481 RDLDQTPKLSGQRCYLCKRDLSFKPEGSVAIPKILPTVAVLPCSHVFHGLCLERITPQNQ 503

Query: 544 AEDPPCLPCAVGDT 553
           AE+PPC+PCAVG+T
Sbjct: 541 AEEPPCIPCAVGET 503

BLAST of Cp4.1LG12g07190 vs. TrEMBL
Match: F6HBZ0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0018g01740 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 3.4e-22
Identity = 52/114 (45.61%), Postives = 77/114 (67.54%), Query Frame = 1

Query: 439 PNQVYQPIISESVPLVSSKFEDLRDRSFRRSRTSRCYIKCRDLDQTPKLSGERCFICKRD 498
           P  + +P IS S+PL  ++        F  S  +  ++K +  D +P+LSG +C ICKRD
Sbjct: 700 PAPMPRPSISPSIPL-RARLPQPSTNPFVPSSAAP-HVKWQGFDGSPELSGLKCLICKRD 759

Query: 499 LSFKPEGSLILPKIPPTVAVLPCSHVFHGLCLERVTPQNQAEDPPCLPCAVGDT 553
           +S+ PEG +  P IPP VAVLPC H+FH  CL+ +TP++Q++DPPC+PCA+G+T
Sbjct: 760 VSYAPEGHIFQPAIPPAVAVLPCGHIFHDHCLQLITPKDQSKDPPCIPCAIGET 811

BLAST of Cp4.1LG12g07190 vs. TrEMBL
Match: A0A068TSD7_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00022277001 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.1e-20
Identity = 42/81 (51.85%), Postives = 60/81 (74.07%), Query Frame = 1

Query: 471 TSRCYIKCRDLDQTPKLSGERCFICKRDLSFKPEGSLILPKIPPTVAVLPCSHVFHGLCL 530
           ++  +IK  D +  P+ +G RC +CKRDLSF+PEG +  P  PP VAVLPC H FH  CL
Sbjct: 660 STSAHIKWTDSESPPRPTGHRCMLCKRDLSFRPEGPIYQPINPPAVAVLPCGHTFHDQCL 719

Query: 531 ERVTPQNQAEDPPCLPCAVGD 552
           + +TP++Q++DPPC+PCA+G+
Sbjct: 720 QNITPEDQSKDPPCIPCAIGE 740

BLAST of Cp4.1LG12g07190 vs. TrEMBL
Match: A0A118JY66_CYNCS (Zinc finger, RING/FYVE/PHD-type OS=Cynara cardunculus var. scolymus GN=Ccrd_023699 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.4e-20
Identity = 43/77 (55.84%), Postives = 59/77 (76.62%), Query Frame = 1

Query: 475 YIKCRDLDQTPKLSGERCFICKRDLSFKPEGSLILPKIPPTVAVLPCSHVFHGLCLERVT 534
           +I  +D D+TP+L+G +C +CKRDLS   EG++  P  PP VAVLPC H FH  CL+ +T
Sbjct: 675 HIAWKDPDRTPQLTGYKCLLCKRDLSLTSEGAVYQPVPPPPVAVLPCGHTFHDQCLQNIT 734

Query: 535 PQNQAEDPPCLPCAVGD 552
           PQ+Q++DPPC+PCA+GD
Sbjct: 735 PQDQSKDPPCIPCAIGD 751

BLAST of Cp4.1LG12g07190 vs. TrEMBL
Match: A0A151S6I3_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_027795 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.4e-20
Identity = 45/77 (58.44%), Postives = 58/77 (75.32%), Query Frame = 1

Query: 475 YIKCRDLDQTPKLSGERCFICKRDLSFKPEGSLILPKIPPTVAVLPCSHVFHGLCLERVT 534
           YIK +D  +TP+  G +CF+CKRDLS+ PEG + LP  PP VAVL C H FH  CLER+T
Sbjct: 604 YIKFKD--ETPEPIGYKCFLCKRDLSYSPEGPISLPPTPPAVAVLSCGHTFHDCCLERIT 663

Query: 535 PQNQAEDPPCLPCAVGD 552
           P +Q+ DPPC+PCA+G+
Sbjct: 664 PDDQSHDPPCIPCALGE 678

BLAST of Cp4.1LG12g07190 vs. TAIR10
Match: AT5G18260.1 (AT5G18260.1 RING/U-box superfamily protein)

HSP 1 Score: 54.3 bits (129), Expect = 2.8e-07
Identity = 25/65 (38.46%), Postives = 36/65 (55.38%), Query Frame = 1

Query: 487 LSGERCFICKRDLSFKPEGS---LILPKIPPTVAVLPCSHVFHGLCLERVTPQNQAEDPP 546
           ++ +RC ICK+ LS K   S   ++  +  P   V PC HV+H  CL++ TP  Q  DP 
Sbjct: 187 MTHQRCGICKKLLSQKSPWSSYKILRSRDMPATGVFPCHHVYHVECLDKATPTAQTRDPS 246

Query: 547 CLPCA 549
           C  C+
Sbjct: 247 CPVCS 251

BLAST of Cp4.1LG12g07190 vs. TAIR10
Match: AT4G39140.1 (AT4G39140.1 RING/U-box superfamily protein)

HSP 1 Score: 49.3 bits (116), Expect = 8.9e-06
Identity = 24/63 (38.10%), Postives = 33/63 (52.38%), Query Frame = 1

Query: 492 CFICKRDLSFKPEGS---LILPKIPPTVAVLPCSHVFHGLCLERVTPQNQAEDPPCLPCA 551
           C  C R LS K   S   + +       A+L C HV+HG CLE++TP+    DP C  C 
Sbjct: 260 CGACSRPLSEKSLWSSQKIFMTNELSVSAILACGHVYHGECLEQMTPEIDKFDPSCPICT 319

BLAST of Cp4.1LG12g07190 vs. NCBI nr
Match: gi|778728849|ref|XP_011659485.1| (PREDICTED: uncharacterized protein LOC105436188 [Cucumis sativus])

HSP 1 Score: 743.4 bits (1918), Expect = 2.8e-211
Identity = 385/557 (69.12%), Postives = 433/557 (77.74%), Query Frame = 1

Query: 1   MDSMEKDNLNLRSKLSGFISDDENEESRCLGTIRSDANFNGLHEEYSAASGFHHSQFPDP 60
           MD+ME DNL LR+ LS FISDDENEE  CL TIRSD NFN LHEEYS A+GFHHSQF DP
Sbjct: 1   MDTMENDNLKLRNNLSDFISDDENEELGCLDTIRSDVNFNRLHEEYSTAAGFHHSQFSDP 60

Query: 61  SVSSHPNLAGSFSDSISYTDIDWSFDGSRLGLSSQKWSHSIYANPKNKTNASFSIRSPEL 120
            VSS P  AGSFSD+ISYTDIDWSFD SRLGLSSQ WS +++ NP+NKTN SF +R+PEL
Sbjct: 61  PVSSRPKFAGSFSDTISYTDIDWSFDSSRLGLSSQNWSRNMFTNPENKTNTSFHVRNPEL 120

Query: 121 ASICRVPARTHEAEGIHRV-----TNNHNFHSAECEDQIDLNITAICSALQPHGLEELDA 180
           +SICR P R+ EAEG+  +     TNNHN  S++CEDQIDLNI AICS  Q H L+E DA
Sbjct: 121 SSICRFPVRSQEAEGLDLIGCDTETNNHNLLSSKCEDQIDLNIAAICSGFQTHCLQEHDA 180

Query: 181 EALDVGCQTKATTAVNKADKISGFKDNSGDIPNLTTFPQNSVGVRCSNFINFSLHQSSVF 240
           E+ +VG  T  TTA+N+ DKISG+KDNSG+IPNLTTFPQNSVGVRCSNFINFSLH SSVF
Sbjct: 181 ESFNVGYHTNPTTALNRTDKISGYKDNSGNIPNLTTFPQNSVGVRCSNFINFSLHPSSVF 240

Query: 241 QPSIIVGGDNPFPTPSFTDDSGLTPAVVQSDEDILNSLKNAPPPTTESVNSKIELSSQCW 300
           QPSIIVGGDNPFP PS  DD  L+  VVQ +EDIL SL+NA P TTES+NS+I +SS+ W
Sbjct: 241 QPSIIVGGDNPFPRPSNEDD--LSADVVQCNEDILKSLRNAAPSTTESINSQIGISSRSW 300

Query: 301 FTDLESCLLRRDQSQRPSEQKSPPDVRNFASEFPTFAPSLGISATISVPDQSVELVQSAG 360
           FTDLESCL R+DQSQ+P E+    DVRNF+SEFPT+APSLGIS TISVPDQSVE  QSAG
Sbjct: 301 FTDLESCLHRKDQSQQPIEE---TDVRNFSSEFPTYAPSLGISTTISVPDQSVEHDQSAG 360

Query: 361 PSQPPQNVGNALASGNQDAREFGTVEDSGIAKSNPNPPVFTSSPVSANTDISFQAHLAQV 420
           PSQPPQN GN+L +GNQDAREFGT EDSGIAK                   SFQAHLA  
Sbjct: 361 PSQPPQNFGNSLTTGNQDAREFGTAEDSGIAK-------------------SFQAHLA-- 420

Query: 421 LSVSVSPDITSHVVIQPQKTEIDPNQVYQPIISESVPLVSSKFEDLRDRSFRRSRTSRCY 480
                                    QV QPII ES+PLVSSKFED  DRSF RSR+SRCY
Sbjct: 421 -------------------------QVSQPIIDESIPLVSSKFEDQGDRSFERSRSSRCY 480

Query: 481 IKCRDLDQTPKLSGERCFICKRDLSFKPEGSLILPKIPPTVAVLPCSHVFHGLCLERVTP 540
           IKCRDLDQTPKLSG+RC++CKRDLSFKPEGS+ +PKI PTVAVLPCSHVFHGLCLER+TP
Sbjct: 481 IKCRDLDQTPKLSGQRCYLCKRDLSFKPEGSVAIPKILPTVAVLPCSHVFHGLCLERITP 506

Query: 541 QNQAEDPPCLPCAVGDT 553
           QNQAE+PPC+PCAVG+T
Sbjct: 541 QNQAEEPPCIPCAVGET 506

BLAST of Cp4.1LG12g07190 vs. NCBI nr
Match: gi|700189964|gb|KGN45197.1| (hypothetical protein Csa_7G430810 [Cucumis sativus])

HSP 1 Score: 739.2 bits (1907), Expect = 5.3e-210
Identity = 383/554 (69.13%), Postives = 430/554 (77.62%), Query Frame = 1

Query: 4   MEKDNLNLRSKLSGFISDDENEESRCLGTIRSDANFNGLHEEYSAASGFHHSQFPDPSVS 63
           ME DNL LR+ LS FISDDENEE  CL TIRSD NFN LHEEYS A+GFHHSQF DP VS
Sbjct: 1   MENDNLKLRNNLSDFISDDENEELGCLDTIRSDVNFNRLHEEYSTAAGFHHSQFSDPPVS 60

Query: 64  SHPNLAGSFSDSISYTDIDWSFDGSRLGLSSQKWSHSIYANPKNKTNASFSIRSPELASI 123
           S P  AGSFSD+ISYTDIDWSFD SRLGLSSQ WS +++ NP+NKTN SF +R+PEL+SI
Sbjct: 61  SRPKFAGSFSDTISYTDIDWSFDSSRLGLSSQNWSRNMFTNPENKTNTSFHVRNPELSSI 120

Query: 124 CRVPARTHEAEGIHRV-----TNNHNFHSAECEDQIDLNITAICSALQPHGLEELDAEAL 183
           CR P R+ EAEG+  +     TNNHN  S++CEDQIDLNI AICS  Q H L+E DAE+ 
Sbjct: 121 CRFPVRSQEAEGLDLIGCDTETNNHNLLSSKCEDQIDLNIAAICSGFQTHCLQEHDAESF 180

Query: 184 DVGCQTKATTAVNKADKISGFKDNSGDIPNLTTFPQNSVGVRCSNFINFSLHQSSVFQPS 243
           +VG  T  TTA+N+ DKISG+KDNSG+IPNLTTFPQNSVGVRCSNFINFSLH SSVFQPS
Sbjct: 181 NVGYHTNPTTALNRTDKISGYKDNSGNIPNLTTFPQNSVGVRCSNFINFSLHPSSVFQPS 240

Query: 244 IIVGGDNPFPTPSFTDDSGLTPAVVQSDEDILNSLKNAPPPTTESVNSKIELSSQCWFTD 303
           IIVGGDNPFP PS  DD  L+  VVQ +EDIL SL+NA P TTES+NS+I +SS+ WFTD
Sbjct: 241 IIVGGDNPFPRPSNEDD--LSADVVQCNEDILKSLRNAAPSTTESINSQIGISSRSWFTD 300

Query: 304 LESCLLRRDQSQRPSEQKSPPDVRNFASEFPTFAPSLGISATISVPDQSVELVQSAGPSQ 363
           LESCL R+DQSQ+P E+    DVRNF+SEFPT+APSLGIS TISVPDQSVE  QSAGPSQ
Sbjct: 301 LESCLHRKDQSQQPIEE---TDVRNFSSEFPTYAPSLGISTTISVPDQSVEHDQSAGPSQ 360

Query: 364 PPQNVGNALASGNQDAREFGTVEDSGIAKSNPNPPVFTSSPVSANTDISFQAHLAQVLSV 423
           PPQN GN+L +GNQDAREFGT EDSGIAK                   SFQAHLA     
Sbjct: 361 PPQNFGNSLTTGNQDAREFGTAEDSGIAK-------------------SFQAHLA----- 420

Query: 424 SVSPDITSHVVIQPQKTEIDPNQVYQPIISESVPLVSSKFEDLRDRSFRRSRTSRCYIKC 483
                                 QV QPII ES+PLVSSKFED  DRSF RSR+SRCYIKC
Sbjct: 421 ----------------------QVSQPIIDESIPLVSSKFEDQGDRSFERSRSSRCYIKC 480

Query: 484 RDLDQTPKLSGERCFICKRDLSFKPEGSLILPKIPPTVAVLPCSHVFHGLCLERVTPQNQ 543
           RDLDQTPKLSG+RC++CKRDLSFKPEGS+ +PKI PTVAVLPCSHVFHGLCLER+TPQNQ
Sbjct: 481 RDLDQTPKLSGQRCYLCKRDLSFKPEGSVAIPKILPTVAVLPCSHVFHGLCLERITPQNQ 503

Query: 544 AEDPPCLPCAVGDT 553
           AE+PPC+PCAVG+T
Sbjct: 541 AEEPPCIPCAVGET 503

BLAST of Cp4.1LG12g07190 vs. NCBI nr
Match: gi|659122566|ref|XP_008461211.1| (PREDICTED: uncharacterized protein LOC103499862 [Cucumis melo])

HSP 1 Score: 657.5 bits (1695), Expect = 2.0e-185
Identity = 353/566 (62.37%), Postives = 416/566 (73.50%), Query Frame = 1

Query: 1   MDSMEKDNLNLRSKLSGFISDDENEESRCLGTIRSDANFNGLHEEYSAASGFHHSQFPDP 60
           MD+ME DNL LR+ LS FISDDENEE  CL TIRSD NFNGLHEEYS A+GFHHSQF DP
Sbjct: 1   MDTMENDNLKLRNSLSDFISDDENEEFGCLDTIRSDVNFNGLHEEYSTAAGFHHSQFSDP 60

Query: 61  SVSSHPNLAGSFSDSISYTDIDWSFDGSRLGLSSQKWSHSIYANPKNKTNASFSIRSPEL 120
            VSSHP  AGSFSD+ISYTDIDWSFD SRLGLSSQ WSHS++ NP+NKTN SF +R+PEL
Sbjct: 61  PVSSHPKFAGSFSDTISYTDIDWSFDSSRLGLSSQNWSHSMFTNPENKTNTSFHVRNPEL 120

Query: 121 ASICRVPARTHEAEGIH-----RVTNNHNFHSAECEDQIDLNITAICSALQPHGLEELDA 180
           +SICR P R+ EAEG+      R  NNHN  S++CEDQIDLNI AICS  Q H L+E DA
Sbjct: 121 SSICRFPVRSQEAEGLDLIGCDRDANNHNLQSSKCEDQIDLNIAAICSGFQTHCLQEHDA 180

Query: 181 EALDVGCQTKATTAVNKADKISGFKDNSGDIPNLTTFPQNSVGVRCSNFINFSLHQSSVF 240
           E  +VG  T  TT++N+ DKISG+KDNSG+IPNLTTFPQNSVG+RCSN INFSLH SS F
Sbjct: 181 ETFNVGYHTNPTTSLNRTDKISGYKDNSGNIPNLTTFPQNSVGLRCSNLINFSLHPSSAF 240

Query: 241 QPSIIVGGDNPFPTPSFTDDSGLTPAVVQSDEDILNSLKNAPPPTTESVNSKIELSSQCW 300
           Q SIIVGGDNPFP PS  +D G +  V++ +EDIL SL++A P TTES+NS+I +SS+ W
Sbjct: 241 QQSIIVGGDNPFPRPS--NDDGWSADVMKCNEDILKSLRSAAPSTTESINSQIGISSRSW 300

Query: 301 FTDLESCLLRRDQSQRPSEQKSPPDVRNFASEFPTFAPSLGISATISVPDQSVELVQSAG 360
           FTDLESCL  RDQSQ+P E     DVRNF+SEFPT+APSLGISATISVPDQS E  QS G
Sbjct: 301 FTDLESCLHIRDQSQQPIET----DVRNFSSEFPTYAPSLGISATISVPDQSFEHDQS-G 360

Query: 361 PSQPPQNVGNALASGNQDAREFGTVEDSGIAKS------NPNPPVFTSSPVSANTDISFQ 420
           PSQPPQN G++L +GNQDAREFGT EDSGIAKS        + P+   S    +++   Q
Sbjct: 361 PSQPPQNFGDSLTTGNQDAREFGTAEDSGIAKSFQAHLAKVSQPIIDESIPLVSSEFEDQ 420

Query: 421 AHLAQVLSVS---VSPDITSHVVIQPQKTEIDPNQVYQPIISESVPLVSSKFEDLRDRSF 480
              +   S S   +    TS    Q  +T  D N++   ++S     +    +DL     
Sbjct: 421 RDRSFERSKSSRYIKCRGTSVSYTQTIQTSRDANKI---LLSHWCHHIFGSIDDLTGN-- 480

Query: 481 RRSRTSRCYIKCRDLDQTPKLSGERCFICKRDLSFKPEGSLILPKIPPTVAVLPCSHVFH 540
                       + LDQTPKLSG+RC++CKRDLSFKPEGS+ +PKI PTVAVLPCSHVFH
Sbjct: 481 ------------QKLDQTPKLSGQRCYLCKRDLSFKPEGSVAIPKILPTVAVLPCSHVFH 540

Query: 541 GLCLERVTPQNQAEDPPCLPCAVGDT 553
           GLCLER+TPQNQAE+PPC+PCAVG+T
Sbjct: 541 GLCLERITPQNQAEEPPCIPCAVGET 542

BLAST of Cp4.1LG12g07190 vs. NCBI nr
Match: gi|731403664|ref|XP_010655144.1| (PREDICTED: uncharacterized protein LOC100853391 isoform X1 [Vitis vinifera])

HSP 1 Score: 114.8 bits (286), Expect = 4.9e-22
Identity = 52/114 (45.61%), Postives = 77/114 (67.54%), Query Frame = 1

Query: 439 PNQVYQPIISESVPLVSSKFEDLRDRSFRRSRTSRCYIKCRDLDQTPKLSGERCFICKRD 498
           P  + +P IS S+PL  ++        F  S  +  ++K +  D +P+LSG +C ICKRD
Sbjct: 700 PAPMPRPSISPSIPL-RARLPQPSTNPFVPSSAAP-HVKWQGFDGSPELSGLKCLICKRD 759

Query: 499 LSFKPEGSLILPKIPPTVAVLPCSHVFHGLCLERVTPQNQAEDPPCLPCAVGDT 553
           +S+ PEG +  P IPP VAVLPC H+FH  CL+ +TP++Q++DPPC+PCA+G+T
Sbjct: 760 VSYAPEGHIFQPAIPPAVAVLPCGHIFHDHCLQLITPKDQSKDPPCIPCAIGET 811

BLAST of Cp4.1LG12g07190 vs. NCBI nr
Match: gi|298204770|emb|CBI25268.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 114.8 bits (286), Expect = 4.9e-22
Identity = 52/114 (45.61%), Postives = 77/114 (67.54%), Query Frame = 1

Query: 439 PNQVYQPIISESVPLVSSKFEDLRDRSFRRSRTSRCYIKCRDLDQTPKLSGERCFICKRD 498
           P  + +P IS S+PL  ++        F  S  +  ++K +  D +P+LSG +C ICKRD
Sbjct: 633 PAPMPRPSISPSIPL-RARLPQPSTNPFVPSSAAP-HVKWQGFDGSPELSGLKCLICKRD 692

Query: 499 LSFKPEGSLILPKIPPTVAVLPCSHVFHGLCLERVTPQNQAEDPPCLPCAVGDT 553
           +S+ PEG +  P IPP VAVLPC H+FH  CL+ +TP++Q++DPPC+PCA+G+T
Sbjct: 693 VSYAPEGHIFQPAIPPAVAVLPCGHIFHDHCLQLITPKDQSKDPPCIPCAIGET 744

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K9Y2_CUCSA3.7e-21069.13Uncharacterized protein OS=Cucumis sativus GN=Csa_7G430810 PE=4 SV=1[more]
F6HBZ0_VITVI3.4e-2245.61Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0018g01740 PE=4 SV=... [more]
A0A068TSD7_COFCA1.1e-2051.85Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00022277001 PE=4 SV=1[more]
A0A118JY66_CYNCS1.4e-2055.84Zinc finger, RING/FYVE/PHD-type OS=Cynara cardunculus var. scolymus GN=Ccrd_0236... [more]
A0A151S6I3_CAJCA1.4e-2058.44Uncharacterized protein OS=Cajanus cajan GN=KK1_027795 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G18260.12.8e-0738.46 RING/U-box superfamily protein[more]
AT4G39140.18.9e-0638.10 RING/U-box superfamily protein[more]
Match NameE-valueIdentityDescription
gi|778728849|ref|XP_011659485.1|2.8e-21169.12PREDICTED: uncharacterized protein LOC105436188 [Cucumis sativus][more]
gi|700189964|gb|KGN45197.1|5.3e-21069.13hypothetical protein Csa_7G430810 [Cucumis sativus][more]
gi|659122566|ref|XP_008461211.1|2.0e-18562.37PREDICTED: uncharacterized protein LOC103499862 [Cucumis melo][more]
gi|731403664|ref|XP_010655144.1|4.9e-2245.61PREDICTED: uncharacterized protein LOC100853391 isoform X1 [Vitis vinifera][more]
gi|298204770|emb|CBI25268.3|4.9e-2245.61unnamed protein product [Vitis vinifera][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g07190.1Cp4.1LG12g07190.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 492..547
score:
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 489..537
score: 1.
NoneNo IPR availablePANTHERPTHR31150FAMILY NOT NAMEDcoord: 481..552
score: 2.7
NoneNo IPR availablePANTHERPTHR31150:SF5ZINC ION BINDING PROTEINcoord: 481..552
score: 2.7
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 486..539
score: 3.2

The following gene(s) are paralogous to this gene:

None