Cp4.1LG12g07190.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGAGTGGAAACGAGATACAACTAACTACGAGGCGTGGAAGTGGAACCCACACCTGGAACGCCAAATTCCGCCTTGCCCCACTGTTTCATCACTCTCTTTCAGGTAATGCTAAAATTCTCCTTCTTCTCTTTCAATCCCGCTCCATTTCCTTTGATTCCTCTGAATTCTTCCGTGTTATGCACTCTCCTTCATGATTCCGATTCGTATATCACTTTTCTTTTTAATCGTTTTTCTTATCTTAGCTGCCGTTGCTGATTTGTATGGATTCGTGAGTTTTCCTCTATTTCTCTAGCGCGCTTGCATTGCTTCGATTTGGTTTAATTTCTGTGTTGTATTTGTTCATATATGTTGTGGATTTCTGAGTTTATTCATCTGAAATTGCTGTGTTTTGTTCATATTCTGTGATTGCATCATGGTGTTTGTCTCTGTTTGATGTTGCTAATGGAGTCGTATCGATCGATCGCGTAGAGCTGGTTTGGATTTTGATTTTGTAATATTTTTGTTCCTTGTTTTGAGATAAGTCGTTCGGACGAAGCGTGGTTTAAGTGGATCGGACGCTGTTTTTGGTGTTTCATTTGTGCAGTTTGTAACCGATCTTTTATTTGTGTTCGTTAATGCATTTGACGTCTCTTTCCGTTTTTGATTGAAATTGTGGTCTAAGCTTCTTTTCCTTTTCCTTTTGTGTAATGTGCTTTGTTCATGGAGATATTTAAAGCGACTTAAAAGACAAAGACCATTAATGCATATACTGCTTAATTATTATAACTGCACGTTGATGATTGCATTACCGAATTCAGTTTTCACCGAATTTCTATTCATATTTCATAATTCAATGATCGGCTGTGTTCTTGATTATTCGTCCGGAGACTGTCTTTCTAATTCCTGTTGTTCAGGATGGACTCGATGGAAAAGGATAATCTGAACCTACGAAGTAAGCTGTCTGGTTTTATTTCTGACGATGAAAATGAAGAATCGAGATGCCTTGGTACAATCAGAAGTGATGCTAACTTCAATGGGCTCCATGAAGAATACAGTGCAGCTTCTGGATTCCATCATTCCCAATTTCCAGATCCATCTGTCTCCTCTCATCCAAACCTTGCTGGATCCTTCTCTGATTCAATTTCATACACTGATATTGATTGGTCATTTGATGGCTCCCGATTGGGATTAAGCTCTCAAAAGTGGTCTCACAGCATTTATGCTAATCCCAAAAATAAGACAAATGCTTCTTTTAGTATCAGAAGTCCAGAACTTGCCAGTATTTGTAGAGTCCCAGCAAGAACTCACGAAGCTGAAGGCATACATAGAGTAACAAACAATCATAATTTTCACTCCGCGGAATGTGAGGACCAAATCGATCTTAACATTACTGCAATTTGCAGTGCACTCCAACCTCATGGTTTAGAAGAACTAGATGCTGAGGCTTTAGATGTTGGATGTCAGACAAAAGCCACCACGGCTGTTAACAAGGCAGATAAGATCTCAGGCTTTAAAGACAATTCAGGGGACATTCCTAACCTTACAACCTTTCCTCAGAACTCTGTAGGAGTAAGATGTAGTAATTTTATTAATTTTAGTTTGCACCAATCATCTGTATTCCAACCATCTATTATAGTTGGTGGGGATAACCCTTTTCCCACGCCAAGCTTTACAGATGATTCAGGTCTTACTCCTGCAGTAGTACAGAGCGATGAGGATATCCTCAACTCGCTTAAAAATGCTCCTCCTCCCACGACAGAATCTGTTAACAGCAAAATTGAGCTATCCTCACAATGCTGGTTTACTGACTTAGAATCTTGTTTGCTTAGAAGGGATCAAAGTCAGCGGCCTTCTGAACAGAAATCTCCTCCTGATGTTAGGAACTTCGCATCTGAATTTCCAACATTTGCTCCTTCCCTTGGGATCTCTGCAACCATCTCTGTTCCAGATCAGTCAGGTAAGAGAGATGGATACTTTAGTGGTAGTTTCATTTTGTTTAACCTTGTATGCTATTTAAGAATGTTCTTAAACAATTTTAGCATAAATGATTATCAATTTTGACGTTGAACATGTTTCTTTATTGCTTGCAGTTGAGCTTGTTCAATCTGCTGGCCCGTCTCAACCTCCCCAAAACGTTGGCAATGCTCTCGCTTCTGGTACCACTTTTATTGTCTTTATTATGATCTCGTCTTCAATTAACAGTTTCATTAAGTAATTATATGGAAGGAGGAATAACTTTAAGCTTGACAAGTTTCAGGAAATCAAGATGCAAGAGAATTTGGGACAGTTGAAGATTCTGGTATTGCTAAATCAAATCCTAATCCACCAGTGTTCACTTCTTCCCCGGTCTCGGCAAATACTGACATATCATTTCAAGCCCATCTTGCGCAGGTTCTATCTGTCTCTGTCTCACCTGATATAACTTCACATGTTGTAATTCAACCTCAGAAAACCGAAATTGACCCAAATCAGGTTTACCAACCAATCATTAGTGAGAGCGTTCCACTTGTTTCTTCCAAGTTTGAAGATCTACGAGATCGTTCTTTCCGACGCTCAAGGACCTCACGTTGTTACATAAAATGCCGAGGTACTTCTCTATTATATATTTAAACGTATTATTGTTTCTCATATTTGTTCATATGCTTGAAAATATTATAGATGTTAGTTTTTCATACTTACGTGCGGTAGCTTAAGAACAAGCACTTGAAATTAAAAAGTCAAAAGTCTTATGATTTTGGTCTGCTTGGTGGTTTATGAATTTATTGGTGATTTAATACTGTCTGGCTGTAGTTTATTTTATTTTATTAAAAAAATATATTTATGTTGGCGGTATGAGTACTAGATTTGTCGTTTTGGGCAGAAAAAGACTACAAATTAGCAGAATAGAAGCTCTAATTTCAATAGAGTATCTGCATAGGTGTCACATACAGACATGAAATCAAATACACGTTGAACAAATGATTTAGTGGGTCTTATCGTTTCAGATAGTTGTCATTTTTAAGTTTTGAACACTTGCATGGCTTCATTCAGACACACCCGGACATGTATTAGAAAACAACCGACAAAATTGTAGACAAGCCACACTGAACCAGTCTACTAACGCATTAGAAAATAATCAGAACTGAGAGATGCACTATTAAACAACAAAGGCAAATCAATATCAAACTAAAAAAGGACATATAAAACAAAACTAAGAAACCATGAACAATTGGGTTTCTTAAAGAGAACCCACAGAATCAATGAAGGCAAATTATAGTTGGACCACTGATCTGGGCTGCAAAAATGGGTGCAGCCAGGATGCATCGTATTTTTCTTTTTTATTCTTCTTTTTAGCTTTGTGAGTTTAATTCTTAACTTTACCAGTGAATTACACAAATTTCAACCAGTATGATACAAAATTGAAGTATAAAAATGCTCAACCCAACCACGAAAATACTTCAAAAAAAAAAAAAATTATTATTATTATGATCTTTGTAGCATGAATAGGAATACTTTGACAGAAGCAAAAGGCTTATATGAACATTTACTGGGTAAGTATGAGATCTATACCCATATATTATCAGGTGGTGATATTTAACTTCGATCATTTGCAGATTTGGATCAAACTCCCAAATTAAGTGGAGAGAGATGCTTCATATGTAAGAGGGATCTTTCATTCAAACCAGAAGGCTCACTTATCCTTCCAAAAATTCCACCAACTGTGGCAGTACTGCCATGTAGCCACGTGTTTCATGGCCTCTGTTTGGAACGCGTCACTCCTCAAAACCAAGCTGAAGATCCTCCCTGTCTTCCGTGTGCTGTTGGCGACACTTGATTTCTGCAAACCATTGGGGTTAGTCACTCATCACCTCTCATTTATTTTTCTCAGATTGAAATTCTTTAACAAGAATAACTTGAGATGGGTTTAACTTTGTATATACGTAGGCTAATTATCACTTAATTTTTTGCTCTCAACTGCACTAATTTTTCTCCCGGGTAAGAAC GAGAGTGGAAACGAGATACAACTAACTACGAGGCGTGGAAGTGGAACCCACACCTGGAACGCCAAATTCCGCCTTGCCCCACTGTTTCATCACTCTCTTTCAGGATGGACTCGATGGAAAAGGATAATCTGAACCTACGAAGTAAGCTGTCTGGTTTTATTTCTGACGATGAAAATGAAGAATCGAGATGCCTTGGTACAATCAGAAGTGATGCTAACTTCAATGGGCTCCATGAAGAATACAGTGCAGCTTCTGGATTCCATCATTCCCAATTTCCAGATCCATCTGTCTCCTCTCATCCAAACCTTGCTGGATCCTTCTCTGATTCAATTTCATACACTGATATTGATTGGTCATTTGATGGCTCCCGATTGGGATTAAGCTCTCAAAAGTGGTCTCACAGCATTTATGCTAATCCCAAAAATAAGACAAATGCTTCTTTTAGTATCAGAAGTCCAGAACTTGCCAGTATTTGTAGAGTCCCAGCAAGAACTCACGAAGCTGAAGGCATACATAGAGTAACAAACAATCATAATTTTCACTCCGCGGAATGTGAGGACCAAATCGATCTTAACATTACTGCAATTTGCAGTGCACTCCAACCTCATGGTTTAGAAGAACTAGATGCTGAGGCTTTAGATGTTGGATGTCAGACAAAAGCCACCACGGCTGTTAACAAGGCAGATAAGATCTCAGGCTTTAAAGACAATTCAGGGGACATTCCTAACCTTACAACCTTTCCTCAGAACTCTGTAGGAGTAAGATGTAGTAATTTTATTAATTTTAGTTTGCACCAATCATCTGTATTCCAACCATCTATTATAGTTGGTGGGGATAACCCTTTTCCCACGCCAAGCTTTACAGATGATTCAGGTCTTACTCCTGCAGTAGTACAGAGCGATGAGGATATCCTCAACTCGCTTAAAAATGCTCCTCCTCCCACGACAGAATCTGTTAACAGCAAAATTGAGCTATCCTCACAATGCTGGTTTACTGACTTAGAATCTTGTTTGCTTAGAAGGGATCAAAGTCAGCGGCCTTCTGAACAGAAATCTCCTCCTGATGTTAGGAACTTCGCATCTGAATTTCCAACATTTGCTCCTTCCCTTGGGATCTCTGCAACCATCTCTGTTCCAGATCAGTCAGTTGAGCTTGTTCAATCTGCTGGCCCGTCTCAACCTCCCCAAAACGTTGGCAATGCTCTCGCTTCTGGAAATCAAGATGCAAGAGAATTTGGGACAGTTGAAGATTCTGGTATTGCTAAATCAAATCCTAATCCACCAGTGTTCACTTCTTCCCCGGTCTCGGCAAATACTGACATATCATTTCAAGCCCATCTTGCGCAGGTTCTATCTGTCTCTGTCTCACCTGATATAACTTCACATGTTGTAATTCAACCTCAGAAAACCGAAATTGACCCAAATCAGGTTTACCAACCAATCATTAGTGAGAGCGTTCCACTTGTTTCTTCCAAGTTTGAAGATCTACGAGATCGTTCTTTCCGACGCTCAAGGACCTCACGTTGTTACATAAAATGCCGAGATTTGGATCAAACTCCCAAATTAAGTGGAGAGAGATGCTTCATATGTAAGAGGGATCTTTCATTCAAACCAGAAGGCTCACTTATCCTTCCAAAAATTCCACCAACTGTGGCAGTACTGCCATGTAGCCACGTGTTTCATGGCCTCTGTTTGGAACGCGTCACTCCTCAAAACCAAGCTGAAGATCCTCCCTGTCTTCCGTGTGCTGTTGGCGACACTTGATTTCTGCAAACCATTGGGGTTAGTCACTCATCACCTCTCATTTATTTTTCTCAGATTGAAATTCTTTAACAAGAATAACTTGAGATGGGTTTAACTTTGTATATACGTAGGCTAATTATCACTTAATTTTTTGCTCTCAACTGCACTAATTTTTCTCCCGGGTAAGAAC ATGGACTCGATGGAAAAGGATAATCTGAACCTACGAAGTAAGCTGTCTGGTTTTATTTCTGACGATGAAAATGAAGAATCGAGATGCCTTGGTACAATCAGAAGTGATGCTAACTTCAATGGGCTCCATGAAGAATACAGTGCAGCTTCTGGATTCCATCATTCCCAATTTCCAGATCCATCTGTCTCCTCTCATCCAAACCTTGCTGGATCCTTCTCTGATTCAATTTCATACACTGATATTGATTGGTCATTTGATGGCTCCCGATTGGGATTAAGCTCTCAAAAGTGGTCTCACAGCATTTATGCTAATCCCAAAAATAAGACAAATGCTTCTTTTAGTATCAGAAGTCCAGAACTTGCCAGTATTTGTAGAGTCCCAGCAAGAACTCACGAAGCTGAAGGCATACATAGAGTAACAAACAATCATAATTTTCACTCCGCGGAATGTGAGGACCAAATCGATCTTAACATTACTGCAATTTGCAGTGCACTCCAACCTCATGGTTTAGAAGAACTAGATGCTGAGGCTTTAGATGTTGGATGTCAGACAAAAGCCACCACGGCTGTTAACAAGGCAGATAAGATCTCAGGCTTTAAAGACAATTCAGGGGACATTCCTAACCTTACAACCTTTCCTCAGAACTCTGTAGGAGTAAGATGTAGTAATTTTATTAATTTTAGTTTGCACCAATCATCTGTATTCCAACCATCTATTATAGTTGGTGGGGATAACCCTTTTCCCACGCCAAGCTTTACAGATGATTCAGGTCTTACTCCTGCAGTAGTACAGAGCGATGAGGATATCCTCAACTCGCTTAAAAATGCTCCTCCTCCCACGACAGAATCTGTTAACAGCAAAATTGAGCTATCCTCACAATGCTGGTTTACTGACTTAGAATCTTGTTTGCTTAGAAGGGATCAAAGTCAGCGGCCTTCTGAACAGAAATCTCCTCCTGATGTTAGGAACTTCGCATCTGAATTTCCAACATTTGCTCCTTCCCTTGGGATCTCTGCAACCATCTCTGTTCCAGATCAGTCAGTTGAGCTTGTTCAATCTGCTGGCCCGTCTCAACCTCCCCAAAACGTTGGCAATGCTCTCGCTTCTGGAAATCAAGATGCAAGAGAATTTGGGACAGTTGAAGATTCTGGTATTGCTAAATCAAATCCTAATCCACCAGTGTTCACTTCTTCCCCGGTCTCGGCAAATACTGACATATCATTTCAAGCCCATCTTGCGCAGGTTCTATCTGTCTCTGTCTCACCTGATATAACTTCACATGTTGTAATTCAACCTCAGAAAACCGAAATTGACCCAAATCAGGTTTACCAACCAATCATTAGTGAGAGCGTTCCACTTGTTTCTTCCAAGTTTGAAGATCTACGAGATCGTTCTTTCCGACGCTCAAGGACCTCACGTTGTTACATAAAATGCCGAGATTTGGATCAAACTCCCAAATTAAGTGGAGAGAGATGCTTCATATGTAAGAGGGATCTTTCATTCAAACCAGAAGGCTCACTTATCCTTCCAAAAATTCCACCAACTGTGGCAGTACTGCCATGTAGCCACGTGTTTCATGGCCTCTGTTTGGAACGCGTCACTCCTCAAAACCAAGCTGAAGATCCTCCCTGTCTTCCGTGTGCTGTTGGCGACACTTGA MDSMEKDNLNLRSKLSGFISDDENEESRCLGTIRSDANFNGLHEEYSAASGFHHSQFPDPSVSSHPNLAGSFSDSISYTDIDWSFDGSRLGLSSQKWSHSIYANPKNKTNASFSIRSPELASICRVPARTHEAEGIHRVTNNHNFHSAECEDQIDLNITAICSALQPHGLEELDAEALDVGCQTKATTAVNKADKISGFKDNSGDIPNLTTFPQNSVGVRCSNFINFSLHQSSVFQPSIIVGGDNPFPTPSFTDDSGLTPAVVQSDEDILNSLKNAPPPTTESVNSKIELSSQCWFTDLESCLLRRDQSQRPSEQKSPPDVRNFASEFPTFAPSLGISATISVPDQSVELVQSAGPSQPPQNVGNALASGNQDAREFGTVEDSGIAKSNPNPPVFTSSPVSANTDISFQAHLAQVLSVSVSPDITSHVVIQPQKTEIDPNQVYQPIISESVPLVSSKFEDLRDRSFRRSRTSRCYIKCRDLDQTPKLSGERCFICKRDLSFKPEGSLILPKIPPTVAVLPCSHVFHGLCLERVTPQNQAEDPPCLPCAVGDT
BLAST of Cp4.1LG12g07190.1 vs. TrEMBL
Match: A0A0A0K9Y2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G430810 PE=4 SV=1) HSP 1 Score: 739.2 bits (1907), Expect = 3.7e-210 Identity = 383/554 (69.13%), Postives = 430/554 (77.62%), Query Frame = 1
BLAST of Cp4.1LG12g07190.1 vs. TrEMBL
Match: F6HBZ0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0018g01740 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 3.4e-22 Identity = 52/114 (45.61%), Postives = 77/114 (67.54%), Query Frame = 1
BLAST of Cp4.1LG12g07190.1 vs. TrEMBL
Match: A0A068TSD7_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00022277001 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 1.1e-20 Identity = 42/81 (51.85%), Postives = 60/81 (74.07%), Query Frame = 1
BLAST of Cp4.1LG12g07190.1 vs. TrEMBL
Match: A0A118JY66_CYNCS (Zinc finger, RING/FYVE/PHD-type OS=Cynara cardunculus var. scolymus GN=Ccrd_023699 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 1.4e-20 Identity = 43/77 (55.84%), Postives = 59/77 (76.62%), Query Frame = 1
BLAST of Cp4.1LG12g07190.1 vs. TrEMBL
Match: A0A151S6I3_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_027795 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 1.4e-20 Identity = 45/77 (58.44%), Postives = 58/77 (75.32%), Query Frame = 1
BLAST of Cp4.1LG12g07190.1 vs. TAIR10
Match: AT5G18260.1 (AT5G18260.1 RING/U-box superfamily protein) HSP 1 Score: 54.3 bits (129), Expect = 2.8e-07 Identity = 25/65 (38.46%), Postives = 36/65 (55.38%), Query Frame = 1
BLAST of Cp4.1LG12g07190.1 vs. TAIR10
Match: AT4G39140.1 (AT4G39140.1 RING/U-box superfamily protein) HSP 1 Score: 49.3 bits (116), Expect = 8.9e-06 Identity = 24/63 (38.10%), Postives = 33/63 (52.38%), Query Frame = 1
BLAST of Cp4.1LG12g07190.1 vs. NCBI nr
Match: gi|778728849|ref|XP_011659485.1| (PREDICTED: uncharacterized protein LOC105436188 [Cucumis sativus]) HSP 1 Score: 743.4 bits (1918), Expect = 2.8e-211 Identity = 385/557 (69.12%), Postives = 433/557 (77.74%), Query Frame = 1
BLAST of Cp4.1LG12g07190.1 vs. NCBI nr
Match: gi|700189964|gb|KGN45197.1| (hypothetical protein Csa_7G430810 [Cucumis sativus]) HSP 1 Score: 739.2 bits (1907), Expect = 5.3e-210 Identity = 383/554 (69.13%), Postives = 430/554 (77.62%), Query Frame = 1
BLAST of Cp4.1LG12g07190.1 vs. NCBI nr
Match: gi|659122566|ref|XP_008461211.1| (PREDICTED: uncharacterized protein LOC103499862 [Cucumis melo]) HSP 1 Score: 657.5 bits (1695), Expect = 2.0e-185 Identity = 353/566 (62.37%), Postives = 416/566 (73.50%), Query Frame = 1
BLAST of Cp4.1LG12g07190.1 vs. NCBI nr
Match: gi|731403664|ref|XP_010655144.1| (PREDICTED: uncharacterized protein LOC100853391 isoform X1 [Vitis vinifera]) HSP 1 Score: 114.8 bits (286), Expect = 4.9e-22 Identity = 52/114 (45.61%), Postives = 77/114 (67.54%), Query Frame = 1
BLAST of Cp4.1LG12g07190.1 vs. NCBI nr
Match: gi|298204770|emb|CBI25268.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 114.8 bits (286), Expect = 4.9e-22 Identity = 52/114 (45.61%), Postives = 77/114 (67.54%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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