Carg17438 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGAAACTCACGATCATGGGCCACGGTGATCGAAGGCTCAAGTCGCTATGCGGGGCAAAGCTCAGACACCTGCAGGCCCCTAAACCAATATTCTTGCGAAAATGGGGACGGATTCCATCAAACAATCGCACACCCAACCAGCAAGCAACTGTGGAGGAGGAACCTCCATTTCTTCCCCATGGGACACATCCAGGTCAGATCTAGCGAAATCGACACACCCAATTGCTTGAATCGCTCTATCTTGTTCATAATTCGAACCCCTTTTTCTGCGATTTAGGAAAAAGAAGCGAAGAAGGAAGCATTTAGGAAGTATTTGGAGTCTAATGGCGTTGTTGATGCTCTCACCAAAGGTTGATTCTCACCATTTCTCTGCTTCAATCCGTATTGCGTTTGAATTTTGATACATTTTCTTTTCTGCGTTCTTTTGCTGGTTGAAGTTCTGGTTGCGTTGTTTGAGCAACACGATAAGCCTTCCTCTGCTCTCGAGTAAGTTCTTGCTTTGAGCTTTTGATAGGTGAAGTTAACCATTGTTCTAGCTATTGATTTTGCACCTAATATCTCGTTTGGCTGTTAGACGAACACAACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGACTTCCCCAAAAGGCCTCGTATCAATGGAGAGAGTATTCGTTGATTATAAACCCATGATCATTCCCTAAATTAGCCGATGTGTGACTTTCATCATCCAACATTGGCATTTTCAAATCTCATATTGTTCTACTAATGTTGTCCAATCAATAGTTGATCTTAGTTACAAGCTGTCTAAACAATGTTTTTATCTTATTTTGATTCCTAAACTTTAGTTTCGGTCCATTTTCAAATCCTTTAATCACTTTCTTATTGAAAATAATGGCATGATTCATTCGAATTCTGGTCTGTTTGAGCTTGAGGAGGTTGGATTAGTTTCGTTTTTCTGAATTATTTGAAAGTTGTGAGGAGATTTCAAATCTTTCTCCTTCTGAATCCTGTCAAGCATTCAATCAAAGCATGTTTTATGTTTAGAAAGTCAAACAATAAACTACAAGGTGTTTGCCATGTTAGAAATTTTGTGAGATCCCACATCGGTGGGAGAGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAAACCTTGAGGGGAGGTCCAAAGAGGACAATATCTGCTAGTGTGGGCTTGGGCTGATATAAATAGTATTGTATCAAAGCCAGGCACCGGGCGATGTGCTAGTGAGGAGGGTGAGCCCTGAAGGGGGGTGGTGGACATGAGGCGGTGTGCCAACAAGGACGCTGGCACCAGGGGGGTGGATTGGAGGGGTATTGGAGAAAGAAGCATTCTTTATAAGGGTTGTGAGATCCCACATCTGTTGGGGAGGAGAACGAAACATTTTTTATAAGGGTGTGGAAACTTCTCTACAGTAGGCGCGTTTTAAAAACCTTGTGGGGAAACCCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTACGGTGGGCTTGAGTCATTACAGAACGAGTGCCAGCGAGGATGCTGGTTCCCGAAGGGGGTGGATTATGAGATTCCACATCAGTTGGGGAGGAGAATGAAGCCTTCTTTATAAGGGTGTGGAAACTTCTCCATAGCAAACGCGTTTTAAAAATCTTGAGGGGAAACCCGAAAGGGAAAGCTCAAAAAGGACAATATTTGCTACGGTGGGCTTGGGTCATTACAACACGAGTGCCAGCGAGGACGTTGGTCCCCGAAGGGGGGTGGATTGTGAGATTCCACATCGGTTGGGGAGGAGAATGAAGCCTTCTTTATAAGGGTGTGGAAACTTCTCCATAGTAGACCGTGTTTTCAAAACCTTGAAGGGAAACCCAAAAGGGAAAGCCCAAAGAGGACAATATCTGCTACGGTGGGCTTGGGTCATTACAACACGAGTGCGGGCGAGGACGCTGGGCCCCGAAGGGGGGTGGGGTGGATTGTGAGATTCCACATCGGTTGGGGAGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAACTTCTCCATAGCAGACACGTTTTAAAAACTTTGAGGGGAAACCCGAAAGGGAAAGCCCAAAGAAGACAATATATGCTACGGTGGGCTTGAGTCATTACAGAACGAGTGCCAACGAGGACGCTGGGCCCTGAAGGGAGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAACAGATACGTTTTAAAAACTTTGAAGGAAAGCCCGGAAAGGAAAGTCCAAAGAGGACAATATCTGCTAGCGGTGGTTTTAACCATTACTTATTCTCAACTAGAGTTTTCTTGTGAAAGTTATCATTTACTGTTGCTTGTAATTTGAAATGCTTAAGAAGTGTAGATTTCTTCTTCTTCCTTTCTAAAAATAAATGAATGATTTTATTGAAGAGAACATTCCGATAGGAAGCACTATTGATAGACTTTTTTTCTTTTACTCTCACAGATTTATTCAACAAAGACTAGGCGGTCCATCTATAGCTGAATACGAGAAGTTACAATCCGAGATGGCGGATTTGCAAGTCAAGTATGACGAGCTTTTAGCTACCCACAAGGAAACCTGTAAAGAGGTAGCGTTGAAATTATCGGACTCGATACTATTACACGTTGTTAAGAATATATGTAATGAATAAGTATATCGTGTTGCAGTTGGAAGGACTTAAAAGTTCGCATAACGTCACGACAATGTCTACCAAGGATACCACTGATGACGAGGAGGAAAACGATAAGGTATGAAGGGCTAATTGAGTTGCACATAGGAGGTTGATGGATTTTCTATATGACAGCCAAGAAAAAGAAAGTGATATCTATTTCCTTTAAGGTATGTGAAGATCTTACGCTATGAACGTTAAAAAGTTGAATTGTATGAAGATCATTCATCTTTTTACCTTTGATTCTTTGACATTGTTTGCTTTTGATAACTCTCGCTTTAGTTCTAGTTTTGGTGTGATGTTTTTAGTGTACATTCGAAAATGAAACGGAAAACGTGCATGTGCCATGGAAAGAACATAACTATAATCTCCTTTGCTGAAACTCTCATGGAACAGCTTAAGCCCACTGCTAGCAAATATTATCCTCGTTGGGTTTTCCCTTTCATGTTTCCTCTAAAGGTTTTTAAAACGTGTCTGTTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCGTTCTCCTCC CGAAACTCACGATCATGGGCCACGGTGATCGAAGGCTCAAGTCGCTATGCGGGGCAAAGCTCAGACACCTGCAGGCCCCTAAACCAATATTCTTGCGAAAATGGGGACGGATTCCATCAAACAATCGCACACCCAACCAGCAAGCAACTGTGGAGGAGGAACCTCCATTTCTTCCCCATGGGACACATCCAGGAAAAAGAAGCGAAGAAGGAAGCATTTAGGAAGTATTTGGAGTCTAATGGCGTTGTTGATGCTCTCACCAAAGTTCTGGTTGCGTTGTTTGAGCAACACGATAAGCCTTCCTCTGCTCTCGAATTTATTCAACAAAGACTAGGCGGTCCATCTATAGCTGAATACGAGAAGTTACAATCCGAGATGGCGGATTTGCAAGTCAAGTATGACGAGCTTTTAGCTACCCACAAGGAAACCTGTAAAGAGTTGGAAGGACTTAAAAGTTCGCATAACGTCACGACAATGTCTACCAAGGATACCACTGATGACGAGGAGGAAAACGATAAGGTATGAAGGGCTAATTGAGTTGCACATAGGAGGTTGATGGATTTTCTATATGACAGCCAAGAAAAAGAAAGTGATATCTATTTCCTTTAAGGTATGTGAAGATCTTACGCTATGAACGTTAAAAAGTTGAATTGTATGAAGATCATTCATCTTTTTACCTTTGATTCTTTGACATTGTTTGCTTTTGATAACTCTCGCTTTAGTTCTAGTTTTGGTGTGATGTTTTTAGTGTACATTCGAAAATGAAACGGAAAACGTGCATGTGCCATGGAAAGAACATAACTATAATCTCCTTTGCTGAAACTCTCATGGAACAGCTTAAGCCCACTGCTAGCAAATATTATCCTCGTTGGGTTTTCCCTTTCATGTTTCCTCTAAAGGTTTTTAAAACGTGTCTGTTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCGTTCTCCTCC ATGGGACACATCCAGGAAAAAGAAGCGAAGAAGGAAGCATTTAGGAAGTATTTGGAGTCTAATGGCGTTGTTGATGCTCTCACCAAAGTTCTGGTTGCGTTGTTTGAGCAACACGATAAGCCTTCCTCTGCTCTCGAATTTATTCAACAAAGACTAGGCGGTCCATCTATAGCTGAATACGAGAAGTTACAATCCGAGATGGCGGATTTGCAAGTCAAGTATGACGAGCTTTTAGCTACCCACAAGGAAACCTGTAAAGAGTTGGAAGGACTTAAAAGTTCGCATAACGTCACGACAATGTCTACCAAGGATACCACTGATGACGAGGAGGAAAACGATAAGGTATGA MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVTTMSTKDTTDDEEENDKV
BLAST of Carg17438 vs. NCBI nr
Match: XP_022938294.1 (c-Myc-binding protein homolog [Cucurbita moschata]) HSP 1 Score: 218.0 bits (554), Expect = 1.7e-53 Identity = 113/115 (98.26%), Postives = 113/115 (98.26%), Query Frame = 0
BLAST of Carg17438 vs. NCBI nr
Match: XP_023537914.1 (c-Myc-binding protein homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 215.3 bits (547), Expect = 1.1e-52 Identity = 112/115 (97.39%), Postives = 113/115 (98.26%), Query Frame = 0
BLAST of Carg17438 vs. NCBI nr
Match: XP_022965975.1 (c-Myc-binding protein homolog [Cucurbita maxima]) HSP 1 Score: 207.6 bits (527), Expect = 2.2e-50 Identity = 108/115 (93.91%), Postives = 111/115 (96.52%), Query Frame = 0
BLAST of Carg17438 vs. NCBI nr
Match: XP_008456430.1 (PREDICTED: C-Myc-binding protein homolog [Cucumis melo]) HSP 1 Score: 201.4 bits (511), Expect = 1.6e-48 Identity = 103/115 (89.57%), Postives = 110/115 (95.65%), Query Frame = 0
BLAST of Carg17438 vs. NCBI nr
Match: XP_004139253.1 (PREDICTED: C-Myc-binding protein homolog [Cucumis sativus]) HSP 1 Score: 199.9 bits (507), Expect = 4.7e-48 Identity = 103/115 (89.57%), Postives = 109/115 (94.78%), Query Frame = 0
BLAST of Carg17438 vs. TAIR10
Match: AT2G14045.1 (unknown protein) HSP 1 Score: 142.5 bits (358), Expect = 1.6e-34 Identity = 73/109 (66.97%), Postives = 94/109 (86.24%), Query Frame = 0
BLAST of Carg17438 vs. Swiss-Prot
Match: sp|Q2TBP7|MYCBP_BOVIN (c-Myc-binding protein OS=Bos taurus OX=9913 GN=MYCBP PE=3 SV=3) HSP 1 Score: 79.3 bits (194), Expect = 3.0e-14 Identity = 38/85 (44.71%), Postives = 62/85 (72.94%), Query Frame = 0
BLAST of Carg17438 vs. Swiss-Prot
Match: sp|Q99417|MYCBP_HUMAN (c-Myc-binding protein OS=Homo sapiens OX=9606 GN=MYCBP PE=1 SV=3) HSP 1 Score: 79.3 bits (194), Expect = 3.0e-14 Identity = 38/85 (44.71%), Postives = 62/85 (72.94%), Query Frame = 0
BLAST of Carg17438 vs. Swiss-Prot
Match: sp|Q5R7A8|MYCBP_PONAB (c-Myc-binding protein OS=Pongo abelii OX=9601 GN=MYCBP PE=3 SV=3) HSP 1 Score: 79.3 bits (194), Expect = 3.0e-14 Identity = 38/85 (44.71%), Postives = 62/85 (72.94%), Query Frame = 0
BLAST of Carg17438 vs. Swiss-Prot
Match: sp|Q9EQS3|MYCBP_MOUSE (c-Myc-binding protein OS=Mus musculus OX=10090 GN=Mycbp PE=1 SV=5) HSP 1 Score: 78.2 bits (191), Expect = 6.7e-14 Identity = 38/85 (44.71%), Postives = 61/85 (71.76%), Query Frame = 0
BLAST of Carg17438 vs. Swiss-Prot
Match: sp|Q54I57|MYCBP_DICDI (c-Myc-binding protein homolog OS=Dictyostelium discoideum OX=44689 GN=mycbp PE=3 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 9.7e-13 Identity = 39/84 (46.43%), Postives = 55/84 (65.48%), Query Frame = 0
BLAST of Carg17438 vs. TrEMBL
Match: tr|A0A1S3C377|A0A1S3C377_CUCME (c-Myc-binding protein homolog OS=Cucumis melo OX=3656 GN=LOC103496370 PE=4 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 1.1e-48 Identity = 103/115 (89.57%), Postives = 110/115 (95.65%), Query Frame = 0
BLAST of Carg17438 vs. TrEMBL
Match: tr|A0A1S3TCE0|A0A1S3TCE0_VIGRR (c-Myc-binding protein homolog OS=Vigna radiata var. radiata OX=3916 GN=LOC106754010 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 1.3e-35 Identity = 80/113 (70.80%), Postives = 99/113 (87.61%), Query Frame = 0
BLAST of Carg17438 vs. TrEMBL
Match: tr|A0A0S3S511|A0A0S3S511_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.05G133300 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 1.3e-35 Identity = 80/113 (70.80%), Postives = 99/113 (87.61%), Query Frame = 0
BLAST of Carg17438 vs. TrEMBL
Match: tr|A0A2P4KIY8|A0A2P4KIY8_QUESU (C-myc-binding protein OS=Quercus suber OX=58331 GN=CFP56_17566 PE=4 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 3.9e-35 Identity = 78/113 (69.03%), Postives = 99/113 (87.61%), Query Frame = 0
BLAST of Carg17438 vs. TrEMBL
Match: tr|A9PH87|A9PH87_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G014100v3 PE=2 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 8.7e-35 Identity = 82/114 (71.93%), Postives = 98/114 (85.96%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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