Carg25075 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGTCAGTCAGCACAGCAAATACTTTTGTGAGTTCTGTGGAAAGGCAAGTAGTTGTGCTCCTTTTTTGCCCAAGTTTTTCATTTCCAAGTCACTTAGTCTTCATGTTCCAGTTATATGCTTCCCCCATTGCAGTATGCAGTTAAGAGGAAGGCAGTTGGAATTTGGGGCTGCAAAGATTGTGGTAAAGTGAAGGCCGGAGGTGCCTACACTCTTAAGTAAGGATCTTACTTCTTTTTGTTCTTTTGTTTATTCCTTTTTTTTTTTTTTTCTTTTCCTTTTCAGTTTTTGTTGTTTAAATGTATTTGATTTTAATGTTATTTTTGGTACCTTTGACAGCACTGCTAGTGCTGTGACAGTGAGGAGCACTATTAGGAGGCTGAGAGAGCAAACTGAAAGCTAA ATGGAAGTCAGTCAGCACAGCAAATACTTTTGTGAGTTCTGTGGAAAGGCAATTAAGAGGAAGGCAGTTGGAATTTGGGGCTGCAAAGATTGTGGTAAAGTGAAGGCCGGAGGTGCCTACACTCTTAATTTTTGTTGTTTAAATGTATTTGATTTTAATGTTATTTTTGGTACCTTTGACAGCACTGCTAGTGCTGTGACAGTGAGGAGCACTATTAGGAGGCTGAGAGAGCAAACTGAAAGCTAA ATGGAAGTCAGTCAGCACAGCAAATACTTTTGTGAGTTCTGTGGAAAGGCAATTAAGAGGAAGGCAGTTGGAATTTGGGGCTGCAAAGATTGTGGTAAAGTGAAGGCCGGAGGTGCCTACACTCTTAATTTTTGTTGTTTAAATGTATTTGATTTTAATGTTATTTTTGGTACCTTTGACAGCACTGCTAGTGCTGTGACAGTGAGGAGCACTATTAGGAGGCTGAGAGAGCAAACTGAAAGCTAA MEVSQHSKYFCEFCGKAIKRKAVGIWGCKDCGKVKAGGAYTLNFCCLNVFDFNVIFGTFDSTASAVTVRSTIRRLREQTES
BLAST of Carg25075 vs. NCBI nr
Match: AFW90557.1 (60S ribosomal protein L37a [Solanum tuberosum]) HSP 1 Score: 115.9 bits (289), Expect = 6.3e-23 Identity = 62/82 (75.61%), Postives = 63/82 (76.83%), Query Frame = 0
BLAST of Carg25075 vs. NCBI nr
Match: ESR58705.1 (hypothetical protein CICLE_v10022898mg [Citrus clementina] >GAY57871.1 hypothetical protein CUMW_182790 [Citrus unshiu]) HSP 1 Score: 115.9 bits (289), Expect = 6.3e-23 Identity = 62/82 (75.61%), Postives = 63/82 (76.83%), Query Frame = 0
BLAST of Carg25075 vs. NCBI nr
Match: EYU42327.1 (hypothetical protein MIMGU_mgv1a0171311mg, partial [Erythranthe guttata]) HSP 1 Score: 115.9 bits (289), Expect = 6.3e-23 Identity = 62/82 (75.61%), Postives = 63/82 (76.83%), Query Frame = 0
BLAST of Carg25075 vs. NCBI nr
Match: EYU42328.1 (hypothetical protein MIMGU_mgv1a0171311mg, partial [Erythranthe guttata]) HSP 1 Score: 115.9 bits (289), Expect = 6.3e-23 Identity = 62/82 (75.61%), Postives = 63/82 (76.83%), Query Frame = 0
BLAST of Carg25075 vs. NCBI nr
Match: CBI33982.3 (unnamed protein product, partial [Vitis vinifera]) HSP 1 Score: 115.9 bits (289), Expect = 6.3e-23 Identity = 62/82 (75.61%), Postives = 63/82 (76.83%), Query Frame = 0
BLAST of Carg25075 vs. TAIR10
Match: AT3G10950.1 (Zinc-binding ribosomal protein family protein) HSP 1 Score: 111.3 bits (277), Expect = 2.8e-25 Identity = 58/82 (70.73%), Postives = 62/82 (75.61%), Query Frame = 0
BLAST of Carg25075 vs. TAIR10
Match: AT3G60245.1 (Zinc-binding ribosomal protein family protein) HSP 1 Score: 109.8 bits (273), Expect = 8.1e-25 Identity = 58/81 (71.60%), Postives = 60/81 (74.07%), Query Frame = 0
BLAST of Carg25075 vs. Swiss-Prot
Match: sp|P0DKK1|RL371_ORYSJ (60S ribosomal protein L37a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0679700 PE=1 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 7.8e-25 Identity = 60/82 (73.17%), Postives = 63/82 (76.83%), Query Frame = 0
BLAST of Carg25075 vs. Swiss-Prot
Match: sp|P0DKK2|RL372_ORYSJ (60S ribosomal protein L37a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0557000 PE=1 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 7.8e-25 Identity = 60/82 (73.17%), Postives = 63/82 (76.83%), Query Frame = 0
BLAST of Carg25075 vs. Swiss-Prot
Match: sp|Q9XHE4|RL37A_GOSHI (60S ribosomal protein L37a OS=Gossypium hirsutum OX=3635 GN=RPL37A PE=3 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 1.7e-24 Identity = 61/82 (74.39%), Postives = 62/82 (75.61%), Query Frame = 0
BLAST of Carg25075 vs. Swiss-Prot
Match: sp|Q9SRK6|R37A1_ARATH (Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL37AB PE=3 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 5.0e-24 Identity = 58/82 (70.73%), Postives = 62/82 (75.61%), Query Frame = 0
BLAST of Carg25075 vs. Swiss-Prot
Match: sp|Q9ZRS8|RL37A_PSEMZ (60S ribosomal protein L37a OS=Pseudotsuga menziesii OX=3357 GN=RPL37A PE=3 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 6.6e-24 Identity = 59/81 (72.84%), Postives = 61/81 (75.31%), Query Frame = 0
BLAST of Carg25075 vs. TrEMBL
Match: tr|A0A2P5FZA6|A0A2P5FZA6_9ROSA (Ribosomal protein OS=Trema orientalis OX=63057 GN=TorRG33x02_011680 PE=3 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 4.1e-23 Identity = 62/82 (75.61%), Postives = 63/82 (76.83%), Query Frame = 0
BLAST of Carg25075 vs. TrEMBL
Match: tr|A0A1S3X5Y9|A0A1S3X5Y9_TOBAC (60S ribosomal protein L37a OS=Nicotiana tabacum OX=4097 GN=LOC107761416 PE=3 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 4.1e-23 Identity = 62/82 (75.61%), Postives = 63/82 (76.83%), Query Frame = 0
BLAST of Carg25075 vs. TrEMBL
Match: tr|A0A1U8EAT3|A0A1U8EAT3_CAPAN (60S ribosomal protein L37a OS=Capsicum annuum OX=4072 GN=LOC107844440 PE=3 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 4.1e-23 Identity = 62/82 (75.61%), Postives = 63/82 (76.83%), Query Frame = 0
BLAST of Carg25075 vs. TrEMBL
Match: tr|A0A1R3HID5|A0A1R3HID5_COCAP (Ribosomal protein L37ae OS=Corchorus capsularis OX=210143 GN=CCACVL1_19104 PE=3 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 4.1e-23 Identity = 62/82 (75.61%), Postives = 63/82 (76.83%), Query Frame = 0
BLAST of Carg25075 vs. TrEMBL
Match: tr|M0ZN48|M0ZN48_SOLTU (Uncharacterized protein OS=Solanum tuberosum OX=4113 GN=102588076 PE=3 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 4.1e-23 Identity = 62/82 (75.61%), Postives = 63/82 (76.83%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |