Carg25461 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25461
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Myosin heavy chain-related, putative
Location	Cucurbita_argyrosperma_scaffold_256 : 142713 .. 143731 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTCCGCCGGCACCACCCGCATTCGAGCATTGTCGTCCCCTGAATTAGTCGAGGGCTCCACAAGTCCACAACAACCACATGTCGATCAAAACTTCATTGGTTTGACGACTTGTTCTGTTTTTTTTTTTTTTTTTAGTTTCTTTTCGAGATATATGATGAGTTTGTTTTTGATTGATTAGGAGTATCTACGAATGTGAGGATTTTGTTGAAACTAATCCACGAGTACAAAGAGGCTTCCACGAAAGGAAACAATGGGAGTAGAGATCAAAGGATATCTGAAATGATGCTTATACTTGATGAAGTCAAATCCCAAATCCAAAGAGCACAAGTTCTTGGTAAGCGAAGGGAAGCCGGGCTTCGAAGGTGCAACACGGATCTTAGGCGAAACGTTCCGAGGGACAAAAAACCGACGAACGAACCAATAACCGATGAGAAGGAGAAGTTGAGGAGAGAGCTGAATGCAAGCATAGCAGCTCGGAAAAGCCTCGAGAGCATATGCTCAAGCATCGGAAAGGAGAAGGAGATCATCGCGAAGGAGCTAGCGAGGACGGTTCAACAATTGCATGGAATGGAAGAACATGTGAATGATCTCAAAGCACAAAATGAAATGCTAATGTGCAAAGTTCAAGCTTGTGTTGCAGAGCATAGAGGGTTAAAAAACAACAATCTACCTGATGCCCAAGGCAGCATTGAAGCCCTCCAAAAACGAAACAAAGCCTTGACCGAACAGCTTCTCAAGTCGCTCGACGCCTACCGATCCTTGAAGCGAAAGCTCAAAGAATATCAAGAGAGAAGAAATGGGGCTAATGCAAGAATGGAAGAAATGGGACACCGAGTTCGAGTCGGACTCGATAGGATTCATAGTTTCAAAGAAATGATCATACAAAGCGACGACGACAATCAAATCGACATTGAGCATGAGATCTCTGAATTGGAACATATGTTCAAATGCTTCGACTCCGAGATATCCAAACACGTCAAGATCAAGAAACACGAGCGCGTCAATACCGATTAG

mRNA sequence

ATGGACTCCGCCGGCACCACCCGCATTCGAGCATTGTCGTCCCCTGAATTAGTCGAGGGCTCCACAAGTCCACAACAACCACATGTCGATCAAAACTTCATTGGAGTATCTACGAATGTGAGGATTTTGTTGAAACTAATCCACGAGTACAAAGAGGCTTCCACGAAAGGAAACAATGGGAGTAGAGATCAAAGGATATCTGAAATGATGCTTATACTTGATGAAGTCAAATCCCAAATCCAAAGAGCACAAGTTCTTGGTAAGCGAAGGGAAGCCGGGCTTCGAAGGTGCAACACGGATCTTAGGCGAAACGTTCCGAGGGACAAAAAACCGACGAACGAACCAATAACCGATGAGAAGGAGAAGTTGAGGAGAGAGCTGAATGCAAGCATAGCAGCTCGGAAAAGCCTCGAGAGCATATGCTCAAGCATCGGAAAGGAGAAGGAGATCATCGCGAAGGAGCTAGCGAGGACGGTTCAACAATTGCATGGAATGGAAGAACATGTGAATGATCTCAAAGCACAAAATGAAATGCTAATGTGCAAAGTTCAAGCTTGTGTTGCAGAGCATAGAGGGTTAAAAAACAACAATCTACCTGATGCCCAAGGCAGCATTGAAGCCCTCCAAAAACGAAACAAAGCCTTGACCGAACAGCTTCTCAAGTCGCTCGACGCCTACCGATCCTTGAAGCGAAAGCTCAAAGAATATCAAGAGAGAAGAAATGGGGCTAATGCAAGAATGGAAGAAATGGGACACCGAGTTCGAGTCGGACTCGATAGGATTCATAGTTTCAAAGAAATGATCATACAAAGCGACGACGACAATCAAATCGACATTGAGCATGAGATCTCTGAATTGGAACATATGTTCAAATGCTTCGACTCCGAGATATCCAAACACGTCAAGATCAAGAAACACGAGCGCGTCAATACCGATTAG

Coding sequence (CDS)

ATGGACTCCGCCGGCACCACCCGCATTCGAGCATTGTCGTCCCCTGAATTAGTCGAGGGCTCCACAAGTCCACAACAACCACATGTCGATCAAAACTTCATTGGAGTATCTACGAATGTGAGGATTTTGTTGAAACTAATCCACGAGTACAAAGAGGCTTCCACGAAAGGAAACAATGGGAGTAGAGATCAAAGGATATCTGAAATGATGCTTATACTTGATGAAGTCAAATCCCAAATCCAAAGAGCACAAGTTCTTGGTAAGCGAAGGGAAGCCGGGCTTCGAAGGTGCAACACGGATCTTAGGCGAAACGTTCCGAGGGACAAAAAACCGACGAACGAACCAATAACCGATGAGAAGGAGAAGTTGAGGAGAGAGCTGAATGCAAGCATAGCAGCTCGGAAAAGCCTCGAGAGCATATGCTCAAGCATCGGAAAGGAGAAGGAGATCATCGCGAAGGAGCTAGCGAGGACGGTTCAACAATTGCATGGAATGGAAGAACATGTGAATGATCTCAAAGCACAAAATGAAATGCTAATGTGCAAAGTTCAAGCTTGTGTTGCAGAGCATAGAGGGTTAAAAAACAACAATCTACCTGATGCCCAAGGCAGCATTGAAGCCCTCCAAAAACGAAACAAAGCCTTGACCGAACAGCTTCTCAAGTCGCTCGACGCCTACCGATCCTTGAAGCGAAAGCTCAAAGAATATCAAGAGAGAAGAAATGGGGCTAATGCAAGAATGGAAGAAATGGGACACCGAGTTCGAGTCGGACTCGATAGGATTCATAGTTTCAAAGAAATGATCATACAAAGCGACGACGACAATCAAATCGACATTGAGCATGAGATCTCTGAATTGGAACATATGTTCAAATGCTTCGACTCCGAGATATCCAAACACGTCAAGATCAAGAAACACGAGCGCGTCAATACCGATTAG

Protein sequence

MDSAGTTRIRALSSPELVEGSTSPQQPHVDQNFIGVSTNVRILLKLIHEYKEASTKGNNGSRDQRISEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRNVPRDKKPTNEPITDEKEKLRRELNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLMCKVQACVAEHRGLKNNNLPDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQERRNGANARMEEMGHRVRVGLDRIHSFKEMIIQSDDDNQIDIEHEISELEHMFKCFDSEISKHVKIKKHERVNTD

Homology

[Close]

BLAST of Carg25461 vs. NCBI nr
Match: XP_023519118.1 (uncharacterized protein LOC111782578 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 587.8 bits (1514), Expect = 2.2e-164
Identity = 308/312 (98.72%), Postives = 310/312 (99.36%), Query Frame = 0


Query: 1   MDSAGTTRIRALSSPELVEGSTSPQQPHVDQNFIGVSTNVRILLKLIHEYKEASTKGNNG 60
           MDSAG TRIRALSSPELVEGSTSP+QPHVDQNFIGVSTNVR LLKLIHEYKEASTKGNNG
Sbjct: 1   MDSAGITRIRALSSPELVEGSTSPRQPHVDQNFIGVSTNVRSLLKLIHEYKEASTKGNNG 60

Query: 61  SRDQRISEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRNVPRDKKPTNEPITDEK 120
           SRDQRISEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRNVPRDKKP+NEPITDEK
Sbjct: 61  SRDQRISEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRNVPRDKKPSNEPITDEK 120

Query: 121 EKLRRELNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLM 180
           EKLRRELNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLM
Sbjct: 121 EKLRRELNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLM 180

Query: 181 CKVQACVAEHRGLKNNNLPDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQERR 240
           CKVQACVAEHRGLKNNNLPDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQERR
Sbjct: 181 CKVQACVAEHRGLKNNNLPDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQERR 240

Query: 241 NGANARMEEMGHRVRVGLDRIHSFKEMIIQSDDDNQIDIEHEISELEHMFKCFDSEISKH 300
           NGANARMEEMGHRVRVGLDRIHSFKEMIIQSDDDNQIDIEHEISELEHMFKCFDSEISKH
Sbjct: 241 NGANARMEEMGHRVRVGLDRIHSFKEMIIQSDDDNQIDIEHEISELEHMFKCFDSEISKH 300

Query: 301 VKIKKHERVNTD 313
           VKIKKHERVNTD
Sbjct: 301 VKIKKHERVNTD 312

[Close]

BLAST of Carg25461 vs. NCBI nr
Match: XP_022927627.1 (uncharacterized protein LOC111434395 [Cucurbita moschata])

HSP 1 Score: 585.5 bits (1508), Expect = 1.1e-163
Identity = 307/312 (98.40%), Postives = 310/312 (99.36%), Query Frame = 0


Query: 1   MDSAGTTRIRALSSPELVEGSTSPQQPHVDQNFIGVSTNVRILLKLIHEYKEASTKGNNG 60
           MDSAG TRIRALSSPELVEGSTSP+QPHVDQNFIGVSTNVRILLKLIHEYKEASTKGNNG
Sbjct: 1   MDSAGITRIRALSSPELVEGSTSPRQPHVDQNFIGVSTNVRILLKLIHEYKEASTKGNNG 60

Query: 61  SRDQRISEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRNVPRDKKPTNEPITDEK 120
           SRDQRISEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRNVPRDKKPTNEPITDEK
Sbjct: 61  SRDQRISEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRNVPRDKKPTNEPITDEK 120

Query: 121 EKLRRELNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLM 180
           EKLRRELNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLM
Sbjct: 121 EKLRRELNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLM 180

Query: 181 CKVQACVAEHRGLKNNNLPDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQERR 240
           CKVQACVAEHRGLKNNN+ DAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQERR
Sbjct: 181 CKVQACVAEHRGLKNNNVSDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQERR 240

Query: 241 NGANARMEEMGHRVRVGLDRIHSFKEMIIQSDDDNQIDIEHEISELEHMFKCFDSEISKH 300
           NGANARMEEMGHRVRVGLDRIHSFKEMIIQSDDDNQIDIEHEISELEHMFKCFDSEISKH
Sbjct: 241 NGANARMEEMGHRVRVGLDRIHSFKEMIIQSDDDNQIDIEHEISELEHMFKCFDSEISKH 300

Query: 301 VKIKKHERVNTD 313
           VKIKKHERV+TD
Sbjct: 301 VKIKKHERVSTD 312

[Close]

BLAST of Carg25461 vs. NCBI nr
Match: XP_023001447.1 (uncharacterized protein LOC111495578 [Cucurbita maxima])

HSP 1 Score: 583.9 bits (1504), Expect = 3.1e-163
Identity = 304/312 (97.44%), Postives = 310/312 (99.36%), Query Frame = 0


Query: 1   MDSAGTTRIRALSSPELVEGSTSPQQPHVDQNFIGVSTNVRILLKLIHEYKEASTKGNNG 60
           M+SAG TRIRALSSPELVEGSTSP+QPHVDQNFIGVSTNVRILLKLIHEYKEAS KGNNG
Sbjct: 1   MESAGITRIRALSSPELVEGSTSPRQPHVDQNFIGVSTNVRILLKLIHEYKEASMKGNNG 60

Query: 61  SRDQRISEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRNVPRDKKPTNEPITDEK 120
           SRDQRISEMMLILDEVKSQIQRAQ+LGKR+EAGLRRCNTDLRRNVPRDKKPTNEPITDEK
Sbjct: 61  SRDQRISEMMLILDEVKSQIQRAQILGKRKEAGLRRCNTDLRRNVPRDKKPTNEPITDEK 120

Query: 121 EKLRRELNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLM 180
           EKLRRELNAS+AARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLM
Sbjct: 121 EKLRRELNASMAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLM 180

Query: 181 CKVQACVAEHRGLKNNNLPDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQERR 240
           CKVQACVAEHRGLKNNN+PDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQERR
Sbjct: 181 CKVQACVAEHRGLKNNNVPDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQERR 240

Query: 241 NGANARMEEMGHRVRVGLDRIHSFKEMIIQSDDDNQIDIEHEISELEHMFKCFDSEISKH 300
           NGANARMEEMGHRVRVGLDRIHSFKEMIIQSDDDNQIDIEHEISELEHMFKCFDSEISKH
Sbjct: 241 NGANARMEEMGHRVRVGLDRIHSFKEMIIQSDDDNQIDIEHEISELEHMFKCFDSEISKH 300

Query: 301 VKIKKHERVNTD 313
           VKIKKHERVNTD
Sbjct: 301 VKIKKHERVNTD 312

[Close]

BLAST of Carg25461 vs. NCBI nr
Match: XP_022954551.1 (uncharacterized protein LOC111456791 [Cucurbita moschata])

HSP 1 Score: 480.7 bits (1236), Expect = 3.7e-132
Identity = 255/318 (80.19%), Postives = 283/318 (88.99%), Query Frame = 0


Query: 1   MDSAGTTRIRALSSPELVEGSTSPQQPHVDQNFIGVSTNVRILLKLIHEYKEASTKGNNG 60
           M+S   TR+RALS  EL    TSP+Q HVDQNF+GVSTNVR+LLKLIHEYK+AS KGNNG
Sbjct: 1   MESLDVTRVRALSFSELANALTSPRQNHVDQNFVGVSTNVRLLLKLIHEYKDASVKGNNG 60

Query: 61  SRDQRISEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRNVPRDKKPTNEPITDEK 120
           SRDQRISEMMLI+D+VK+QIQ++Q LGK+R A LRRCNTDLRRNVPRDK+ +NEP+ DEK
Sbjct: 61  SRDQRISEMMLIIDDVKTQIQKSQFLGKKRAAELRRCNTDLRRNVPRDKR-SNEPVMDEK 120

Query: 121 EKLRRELNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLM 180
           E+LRRELNAS+AARKSLESICSSIGKEKEIIAKELARTVQQL+GMEEH+NDLKAQNEMLM
Sbjct: 121 ERLRRELNASMAARKSLESICSSIGKEKEIIAKELARTVQQLNGMEEHLNDLKAQNEMLM 180

Query: 181 CKVQACVAEHRGLKNNNLPDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQERR 240
           CKVQACVAEHR +K NN+PDAQ ++EALQKRNK LTEQLLKSLDAYRSLKRK+KEYQE+R
Sbjct: 181 CKVQACVAEHR-VKKNNVPDAQANMEALQKRNKVLTEQLLKSLDAYRSLKRKIKEYQEKR 240

Query: 241 NGANARMEEMGHRVRVGLDRIHSFKEMIIQSDDDNQIDIEHEISELEHMFKCFDSEISKH 300
           +G NARMEEMG RVRVGLDRIHSFKEM  QSDD  QIDIEHEIS LEHMFKCFD EISKH
Sbjct: 241 SGENARMEEMGLRVRVGLDRIHSFKEMFTQSDDKKQIDIEHEISALEHMFKCFDLEISKH 300

Query: 301 VKIK------KHERVNTD 313
           VK+K      KHER+N D
Sbjct: 301 VKMKKYPIECKHERINAD 316

[Close]

BLAST of Carg25461 vs. NCBI nr
Match: XP_023542824.1 (uncharacterized protein LOC111802625 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 478.8 bits (1231), Expect = 1.4e-131
Identity = 253/318 (79.56%), Postives = 283/318 (88.99%), Query Frame = 0


Query: 1   MDSAGTTRIRALSSPELVEGSTSPQQPHVDQNFIGVSTNVRILLKLIHEYKEASTKGNNG 60
           M+S   TR+RALS  EL    TSP+Q HVDQNF+GVSTNVR+LLKLIHEYK+AS KGNNG
Sbjct: 1   MESLDVTRVRALSFSELANALTSPRQNHVDQNFVGVSTNVRLLLKLIHEYKDASVKGNNG 60

Query: 61  SRDQRISEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRNVPRDKKPTNEPITDEK 120
           SRDQRISEMMLI+D+VK+QIQ++Q LGK+R A LRRCNTDLRRNVPRDK+ +NEP+ DEK
Sbjct: 61  SRDQRISEMMLIIDDVKTQIQKSQFLGKKRAAELRRCNTDLRRNVPRDKR-SNEPVMDEK 120

Query: 121 EKLRRELNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLM 180
           E+LRRELNAS+AARKSLESICSSIGKEKEIIAKELARTVQQL+GMEEH+NDLKAQNEMLM
Sbjct: 121 ERLRRELNASMAARKSLESICSSIGKEKEIIAKELARTVQQLNGMEEHLNDLKAQNEMLM 180

Query: 181 CKVQACVAEHRGLKNNNLPDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQERR 240
           CKVQACVAEHR +K NN+PDAQ ++EALQKRNK LTEQLLKSLDAYRSLKRK+KEYQE+R
Sbjct: 181 CKVQACVAEHR-VKKNNVPDAQANMEALQKRNKVLTEQLLKSLDAYRSLKRKIKEYQEKR 240

Query: 241 NGANARMEEMGHRVRVGLDRIHSFKEMIIQSDDDNQIDIEHEISELEHMFKCFDSEISKH 300
           +G NARMEEMG RVRVGLDRIHSFKEM  Q+DD+  IDIEHEIS LEHMFKCFD EISKH
Sbjct: 241 SGENARMEEMGLRVRVGLDRIHSFKEMFTQNDDEKHIDIEHEISALEHMFKCFDLEISKH 300

Query: 301 VKIK------KHERVNTD 313
           VK+K      KHER+N D
Sbjct: 301 VKMKKYPVECKHERINAD 316

[Close]

BLAST of Carg25461 vs. TAIR10
Match: AT4G03620.1 (myosin heavy chain-related)

HSP 1 Score: 212.6 bits (540), Expect = 3.4e-55
Identity = 133/312 (42.63%), Postives = 194/312 (62.18%), Query Frame = 0


Query: 7   TRIRALSSPELV---EGS-------TSPQQPHVDQNFIGVSTNVRILLKLIHEYKEASTK 66
           +R+RA S+P+LV    GS       T   Q H D    G++TNV++LLKL+ ++ EA+++
Sbjct: 34  SRLRAFSAPDLVPSDSGSITSSPTRTIEHQSHEDSGLEGITTNVKLLLKLVQDHNEATSR 93

Query: 67  GNNGSRDQRISEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRNVPRDKKPTNEPI 126
            ++  + QR++ MM ILD++K++IQ+AQ      +  LRRC TDL+R+    K PT  P 
Sbjct: 94  HHDDWKVQRVNTMMTILDDLKTRIQKAQQQSSSGKKELRRCYTDLKRSPDLTKSPTKPPQ 153

Query: 127 TDEK--EKLRRELNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKA 186
            D +  +KLR+EL+AS+AARKSL+ +CSS+GKEKEI+A EL+R   +L+ MEE V+D +A
Sbjct: 154 NDPEDIQKLRKELSASMAARKSLQMMCSSLGKEKEIMALELSRKAHELNEMEELVSDFRA 213

Query: 187 QNEMLMCKVQACVAEHRGLKNNNL--PDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRK 246
           QNE L+ KVQ C  EH   K  ++  P    +   LQ RNK L+EQLLKS+D YRSLKRK
Sbjct: 214 QNEKLLKKVQNCAVEHNKEKKEDIDGPGPGDNNVPLQGRNKELSEQLLKSIDGYRSLKRK 273

Query: 247 LKEYQERRNGANARMEEMGHRVRVGLDRIHSFKEMIIQSDDDNQIDIEHEISELEHMFKC 305
            K+ Q+        + +    V VG  R+    E I + D   +++IE+EIS LE +F+ 
Sbjct: 274 YKDVQDENGSMRRALRDYAEGVNVGTQRLTKLHEKITRED---EVNIENEISNLEKLFQG 333

[Close]

BLAST of Carg25461 vs. TrEMBL
Match: tr|A0A1S3BAN5|A0A1S3BAN5_CUCME (outer dense fiber protein 2 OS=Cucumis melo OX=3656 GN=LOC103488021 PE=4 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 2.7e-131
Identity = 260/320 (81.25%), Postives = 285/320 (89.06%), Query Frame = 0


Query: 1   MDSAGTTRIRALSSPELVEGSTSPQQPHVDQNFIGVSTNVRILLKLIHEYKEASTKGNNG 60
           M+S    R+RALSSPEL    TSP+Q HVDQNF+GVSTNVRILLKLIHEYKEAS KGN+G
Sbjct: 1   MESIDINRVRALSSPELANPLTSPRQHHVDQNFVGVSTNVRILLKLIHEYKEASVKGNDG 60

Query: 61  SRDQRISEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRNVPRDKKPTNEP-ITDE 120
           S++QRISEMM I+DEVKSQI ++Q LGKR+EA LRRCNTDLRRNVP+DKK TNEP ITDE
Sbjct: 61  SKNQRISEMMQIIDEVKSQILKSQSLGKRKEAALRRCNTDLRRNVPKDKK-TNEPIITDE 120

Query: 121 KEKLRRELNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML 180
           KE+LRRELNAS+AARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML
Sbjct: 121 KERLRRELNASVAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML 180

Query: 181 MCKVQACVAEHRGLKNNNLPDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQER 240
           MCKVQACVAEHR +K NN+PDAQG+IEALQKRNK LTEQLLKSLDAYRSLKRKLKEYQE+
Sbjct: 181 MCKVQACVAEHR-VKKNNVPDAQGNIEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQEK 240

Query: 241 RNGANARMEEMGHRVRVGLDRIHSFKEMII-QSDDDNQIDIEHEISELEHMFKCFDSEIS 300
           RNG NARMEEMG +VR GL+RIHSFKEM+I Q+DD+ QIDIE EIS LEHMFKCFD EIS
Sbjct: 241 RNGTNARMEEMGIQVRAGLNRIHSFKEMMITQTDDEKQIDIEQEISALEHMFKCFDFEIS 300

Query: 301 KHVKIK------KHERVNTD 313
           K VKIK      KH+R+N D
Sbjct: 301 KQVKIKKHPLECKHDRINAD 318

[Close]

BLAST of Carg25461 vs. TrEMBL
Match: tr|A0A0A0LVR7|A0A0A0LVR7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G537380 PE=4 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 1.5e-129
Identity = 256/317 (80.76%), Postives = 283/317 (89.27%), Query Frame = 0


Query: 1   MDSAGTTRIRALSSPELVEGS-TSPQQPHVDQNFIGVSTNVRILLKLIHEYKEASTKGNN 60
           M+S    R+RALSSPEL   +  SP+Q H+DQNF+GVSTNVR+LLKLIHEYKE S KGN+
Sbjct: 1   MESIDINRVRALSSPELANTTLISPRQHHIDQNFVGVSTNVRLLLKLIHEYKEVSMKGND 60

Query: 61  GSRDQRISEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRNVPRDKKPTNEP-ITD 120
           GS+DQRISEMMLI+DEVKSQIQ+++ LGKRREA LRRCNTDLRRNVP+DKK TNEP I D
Sbjct: 61  GSKDQRISEMMLIIDEVKSQIQKSRSLGKRREAELRRCNTDLRRNVPKDKK-TNEPIIID 120

Query: 121 EKEKLRRELNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEM 180
           EKE+LRRELNAS+A+RKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEM
Sbjct: 121 EKERLRRELNASVASRKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEM 180

Query: 181 LMCKVQACVAEHRGLKNNNLPDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQE 240
           LMCKVQACVAEHR +K NN+PDAQG+ EALQKRNK LTEQLLKSLDAYRSLKRKLKEYQE
Sbjct: 181 LMCKVQACVAEHR-VKKNNVPDAQGNFEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQE 240

Query: 241 RRNGANARMEEMGHRVRVGLDRIHSFKEMII-QSDDDNQIDIEHEISELEHMFKCFDSEI 300
           RRNG NARMEEMG +VR GL+RIHSFKEM+I Q+DDD QIDIE EIS LEHMFKCFD EI
Sbjct: 241 RRNGTNARMEEMGIQVRAGLERIHSFKEMMITQTDDDKQIDIESEISALEHMFKCFDFEI 300

Query: 301 SKHVKIKKH--ERVNTD 313
           SK  K+KKH  +R+N D
Sbjct: 301 SKQTKVKKHPVDRINAD 315

[Close]

BLAST of Carg25461 vs. TrEMBL
Match: tr|M5WHV6|M5WHV6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G087600 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 8.9e-82
Identity = 172/296 (58.11%), Postives = 229/296 (77.36%), Query Frame = 0


Query: 8   RIRALSSP---ELVEGSTSPQQPHVDQNFIGVSTNVRILLKLIHEYKEASTKGNNGSRDQ 67
           RIRA SSP    L   ST+P++   D +F G++TNV++LLKLIH++ EA TK N+  + Q
Sbjct: 3   RIRAFSSPAVLPLPASSTTPKERPEDHSFDGIATNVKLLLKLIHDHNEACTKENDDRKTQ 62

Query: 68  RISEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRNVPRDKKPTNEPITDEKEKLR 127
           R++ M+ I+D+VK++IQ++Q +G+R E  LRRCNTDLR NVPRDK+PT EPI DEKE+LR
Sbjct: 63  RVAGMITIIDDVKTRIQKSQSIGRRAE--LRRCNTDLRPNVPRDKRPT-EPIIDEKERLR 122

Query: 128 RELNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLMCKVQ 187
           ++L+AS+AARKSLE +CSS+GKEKEIIA ELAR VQ+  GMEEH+NDL+AQNE L+ KVQ
Sbjct: 123 KQLSASLAARKSLEIMCSSLGKEKEIIASELARKVQEFSGMEEHINDLRAQNEKLLAKVQ 182

Query: 188 ACVAEHRGLKNNNLPDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQERRNGAN 247
           AC AEH+  K   + + QG++ ALQ+RNKAL+EQLLKSLD  RSLKRK+K+ Q+  NG +
Sbjct: 183 ACAAEHKEKKCGGV-EIQGNV-ALQERNKALSEQLLKSLDGCRSLKRKIKDAQKENNGMH 242

Query: 248 ARMEEMGHRVRVGLDRIHSFKEMIIQSDDDNQIDIEHEISELEHMFKCFDSEISKH 301
           + MEEMG  V+ GLDRI + +E I  SD++   D+E EIS LE +F+CF + +SKH
Sbjct: 243 SAMEEMGVEVQEGLDRIRALREKITTSDNEQATDVEEEISALERLFECFSTRVSKH 293

[Close]

BLAST of Carg25461 vs. TrEMBL
Match: tr|A0A2N9GAY8|A0A2N9GAY8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24450 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 6.4e-72
Identity = 163/294 (55.44%), Postives = 216/294 (73.47%), Query Frame = 0


Query: 7   TRIRALSSPELVEGSTSPQQPHVDQNFIGVSTNVRILLKLIHEYKEASTKGNNGSRDQRI 66
           ++ RA SSPEL   S +  +   D    GV+TNV++LLKLI ++ EA TK N+  + QR+
Sbjct: 2   SKARAFSSPELAPPSINHHEMPEDYCLEGVATNVKLLLKLIQDHNEACTKDNDNRKLQRV 61

Query: 67  SEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRNVPRDKKPTNEPITDEKEKLRRE 126
           + M+ I+D+VK+++++ Q  GK+RE  LRRCNTDLR NVPRDKK + +PITDEKE+LRRE
Sbjct: 62  AGMIAIIDDVKTRVEKFQSSGKKRE--LRRCNTDLRPNVPRDKK-SPDPITDEKERLRRE 121

Query: 127 LNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLMCKVQAC 186
           LN+S+AA+KSLE +CSS+GKEKEIIA ELAR VQ+  GMEE +NDLK QNEML+ KVQA 
Sbjct: 122 LNSSLAAQKSLEVMCSSLGKEKEIIASELARKVQEFDGMEELINDLKVQNEMLLGKVQAY 181

Query: 187 VAEHRGLKNNNLPDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQERRNGANAR 246
             EHRG K     + QG++  LQ+RNKAL+E+LL+SLD YRSLKR+ ++ +E        
Sbjct: 182 AEEHRGKKCGG-GEGQGNV-TLQERNKALSEKLLRSLDGYRSLKRRFRDAKEENIAIFET 241

Query: 247 MEEMGHRVRVGLDRIHSFKEMIIQSDDDNQIDIEHEISELEHMFKCFDSEISKH 301
           MEEMG  V+ GLDRI SFK+  + S ++  +D E EIS +EHMF+ FD +ISKH
Sbjct: 242 MEEMGMEVQAGLDRICSFKQR-MASGNEQPVDFEEEISAIEHMFEGFDMKISKH 289

[Close]

BLAST of Carg25461 vs. TrEMBL
Match: tr|A0A1Q3C8H9|A0A1Q3C8H9_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_19886 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.9e-71
Identity = 166/312 (53.21%), Postives = 224/312 (71.79%), Query Frame = 0


Query: 7   TRIRALSSPELVEGSTSPQQPH------VDQNFIGVSTNVRILLKLIHEYKEASTKGNNG 66
           +RIRA S+PELV  ST+P+  H       D +F G++TNV++LLKLI ++++A+ K N+ 
Sbjct: 5   SRIRAFSNPELVP-STTPKASHGADQWTEDYSFEGMATNVKLLLKLIQDHQDANLKYNDD 64

Query: 67  SRDQRISEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRN-VPRDKKPTNEPITDE 126
            R QR++ MM ILD+VKS+IQ++Q  GK+R A LRRC TDLR N VPR+KKP NEPITDE
Sbjct: 65  RRTQRVAGMMTILDDVKSRIQKSQSSGKKRMAELRRCYTDLRANPVPREKKP-NEPITDE 124

Query: 127 KEKLRRELNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML 186
           KE LR+ELN S+AARKSLE +CSS+GKEKEI+A ELAR V +++ MEE +NDL+ QNE L
Sbjct: 125 KEILRKELNGSLAARKSLEMMCSSLGKEKEIMASELARKVHEVNEMEELINDLRVQNETL 184

Query: 187 MCKVQACVAEHRGLKNNNLPDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQER 246
           + KV+AC  EH+  K     +AQG   ALQ RNKAL+EQLLKSLD YRSLKRK KE ++ 
Sbjct: 185 LAKVKACATEHKDKKCGG-GEAQGK-AALQDRNKALSEQLLKSLDGYRSLKRKYKEAKDE 244

Query: 247 RNGANARMEEMGHRVRVGLDRIHSFKEMIIQS---DDDNQIDIEHEISELEHMFKCFDSE 306
               +A +EEMG  V  GLD++  F++ +  +    +     +E EI+ LEH+F+CFD+ 
Sbjct: 245 NMMIHATLEEMGVDVTAGLDQVRGFRQRMATATTMTEKKSAGMEQEITTLEHIFQCFDTR 304

Query: 307 ISKHVKIKKHER 309
           ISKH +  ++ +
Sbjct: 305 ISKHCQKSEYAK 312

The following BLAST results are available for this feature:

BLAST of Carg25461 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023519118.1	2.2e-164	98.72	uncharacterized protein LOC111782578 [Cucurbita pepo subsp. pepo]	[more]
XP_022927627.1	1.1e-163	98.40	uncharacterized protein LOC111434395 [Cucurbita moschata]	[more]
XP_023001447.1	3.1e-163	97.44	uncharacterized protein LOC111495578 [Cucurbita maxima]	[more]
XP_022954551.1	3.7e-132	80.19	uncharacterized protein LOC111456791 [Cucurbita moschata]	[more]
XP_023542824.1	1.4e-131	79.56	uncharacterized protein LOC111802625 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg25461 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G03620.1	3.4e-55	42.63	myosin heavy chain-related	[more]

BLAST of Carg25461 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg25461 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BAN5\|A0A1S3BAN5_CUCME	2.7e-131	81.25	outer dense fiber protein 2 OS=Cucumis melo OX=3656 GN=LOC103488021 PE=4 SV=1	[more]
tr\|A0A0A0LVR7\|A0A0A0LVR7_CUCSA	1.5e-129	80.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G537380 PE=4 SV=1	[more]
tr\|M5WHV6\|M5WHV6_PRUPE	8.9e-82	58.11	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G087600 PE=4 SV=1	[more]
tr\|A0A2N9GAY8\|A0A2N9GAY8_FAGSY	6.4e-72	55.44	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24450 PE=4 SV=1	[more]
tr\|A0A1Q3C8H9\|A0A1Q3C8H9_CEPFO	1.9e-71	53.21	Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_19886 PE=4...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25461-RA	Carg25461-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 198..253
None	No IPR available	COILS	Coil	Coil	coord: 155..175
None	No IPR available	COILS	Coil	Coil	coord: 120..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR38378	FAMILY NOT NAMED	coord: 7..304

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25461	Cla019542	Watermelon (97103) v1	carwmB0196
Carg25461	Csa1G537380	Cucumber (Chinese Long) v2	carcuB0231
Carg25461	MELO3C002779	Melon (DHL92) v3.5.1	carmeB0212
Carg25461	ClCG03G006430	Watermelon (Charleston Gray)	carwcgB0202
Carg25461	CSPI01G24660	Wild cucumber (PI 183967)	carcpiB0238
Carg25461	Cucsa.166740	Cucumber (Gy14) v1	carcgyB0250
Carg25461	CmaCh18G004940	Cucurbita maxima (Rimu)	carcmaB0286
Carg25461	CmaCh13G005060	Cucurbita maxima (Rimu)	carcmaB0285
Carg25461	CmoCh18G004720	Cucurbita moschata (Rifu)	carcmoB0291
Carg25461	CmoCh13G005350	Cucurbita moschata (Rifu)	carcmoB0290
Carg25461	Lsi02G009280	Bottle gourd (USVL1VR-Ls)	carlsiB184
Carg25461	Cp4.1LG09g07360	Cucurbita pepo (Zucchini)	carcpeB0293
Carg25461	Cp4.1LG20g05510	Cucurbita pepo (Zucchini)	carcpeB0294
Carg25461	CsGy1G024120	Cucumber (Gy14) v2	carcgybB0220
Carg25461	MELO3C002779.2	Melon (DHL92) v3.6.1	carmedB0217
Carg25461	CsaV3_1G036960	Cucumber (Chinese Long) v3	carcucB0235
Carg25461	Cla97C03G057700	Watermelon (97103) v2	carwmbB0210
Carg25461	Bhi08G000985	Wax gourd	carwgoB0256

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg25461	Carg22562	Silver-seed gourd	carcarB243

The following block(s) are covering this gene:

None