Csa1G537380 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G537380
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionChromosome partition protein Smc
LocationChr1 : 19376003 .. 19377795 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGAGAAGAGGGAAAGGGGAGATTGAGCCAAATTCCAATCTCTCTTTTTCTTCTACTGTTTATATCTTTTTAATCCTTTCTCCCAAATATTTGCAATAACTCTCAACATTTCTATTTCCTCTCTATCTCCCTCTTGTCTTCTTCTGTTCTTGCATTGCCATTTCATGTTTCTTTGCATCTTTCCCATTTAATCTCTTTCATTTTGGTTACTTTCCTGCTTTTCCTTTTCAATTCTTTTCCTCATGGAATCTATAGACATCAACCGTGTTCGAGCTTTGTCCTCTCCTGAATTAGCAAATACTACCTTGATCAGTCCACGACAACATCATATTGATCAAAACTTTGTCGGTACGTCCAATTCTTATTACTCGAAATTTATTTGTTTTTAGGAATGTGTTTTTTTTTTTTTTATTGGTATTGTTTGATTGTTTAGGAGTATCTACCAATGTGAGGCTTTTATTGAAACTAATCCATGAGTACAAAGAGGTTTCCATGAAAGGAAACGATGGAAGCAAAGATCAAAGGATATCTGAAATGATGCTTATAATTGATGAAGTGAAATCCCAAATCCAAAAATCTCGCTCTCTTGGTAAGAGAAGGGAAGCTGAGCTTAGAAGGTGCAATACGGATCTTAGGCGAAACGTTCCCAAGGACAAAAAGACGAATGAGCCAATAATAATCGATGAGAAGGAGAGGTTGAGGAGAGAGCTGAATGCAAGTGTGGCTTCACGTAAAAGCCTTGAAAGTATATGTTCGAGCATCGGAAAGGAGAAGGAGATCATCGCGAAGGAGCTAGCAAGGACGGTTCAACAATTGCACGGAATGGAAGAGCATGTTAATGATCTCAAAGCACAAAATGAAATGCTGATGTGCAAAGTTCAAGCTTGTGTTGCTGAGCATAGAGTGAAGAAAAACAATGTACCTGATGCACAAGGCAACTTTGAAGCCCTCCAAAAGAGAAACAAAGTGTTAACAGAACAACTTCTTAAGTCGCTCGATGCATACCGATCCTTAAAGCGAAAGCTAAAGGAATATCAAGAGAGAAGAAACGGGACTAATGCAAGAATGGAAGAAATGGGAATCCAAGTACGAGCAGGACTTGAAAGGATTCATAGTTTTAAAGAAATGATGATCACTCAAACTGATGATGACAAGCAGATTGACATCGAAAGTGAGATCTCTGCATTAGAGCATATGTTCAAATGCTTCGACTTTGAGATATCCAAACAAACCAAGGTCAAGAAGCACCCTGTTGATCGCATTAATGCTGATAAGTGACTACTTCCTGCTCGAGTTTATAATAGAAACAGCAGCTCACAGCCGCGATAATTCCTAGTCCAAATCCTACTTTTTTTTGTTTGGAACAACAATGGGGATGGCCTCGAGTGTGAGATTAGTGATGGTACATTGACACCTTGTTTTGTTGTGATCATGTACTGTTCAAATGTACTAGTTCAGTTGCTCTAGTTTTAATGTACTGTTTGAACTTTAAACCAATCAATAATTCAGCAGGAACTTCTACTTAAACTACTTTCCCTTCATTCACTTTTTCTTCAATCTTACAATGACAGCATAACCAATTTTGAAGTAACATGACATACACAACATTGTCTGTTTTCCCGTCTTGCTTCGTACCGAAAACTTGAAAGAAGACATCATGGTCTAAATAATTTTCAGAGAAAATAGAATTCCAAAGGAAGTAGAAGGGGATGGAAAGAAGAGTAGCTCAAATTTGTCCTTCAAGCTGTTTCTACGTACAGATATGATGACAATAAGAGAGAGAGAAAAAAAA

mRNA sequence

ATGGAATCTATAGACATCAACCGTGTTCGAGCTTTGTCCTCTCCTGAATTAGCAAATACTACCTTGATCAGTCCACGACAACATCATATTGATCAAAACTTTGTCGGAGTATCTACCAATGTGAGGCTTTTATTGAAACTAATCCATGAGTACAAAGAGGTTTCCATGAAAGGAAACGATGGAAGCAAAGATCAAAGGATATCTGAAATGATGCTTATAATTGATGAAGTGAAATCCCAAATCCAAAAATCTCGCTCTCTTGGTAAGAGAAGGGAAGCTGAGCTTAGAAGGTGCAATACGGATCTTAGGCGAAACGTTCCCAAGGACAAAAAGACGAATGAGCCAATAATAATCGATGAGAAGGAGAGGTTGAGGAGAGAGCTGAATGCAAGTGTGGCTTCACGTAAAAGCCTTGAAAGTATATGTTCGAGCATCGGAAAGGAGAAGGAGATCATCGCGAAGGAGCTAGCAAGGACGGTTCAACAATTGCACGGAATGGAAGAGCATGTTAATGATCTCAAAGCACAAAATGAAATGCTGATGTGCAAAGTTCAAGCTTGTGTTGCTGAGCATAGAGTGAAGAAAAACAATGTACCTGATGCACAAGGCAACTTTGAAGCCCTCCAAAAGAGAAACAAAGTGTTAACAGAACAACTTCTTAAGTCGCTCGATGCATACCGATCCTTAAAGCGAAAGCTAAAGGAATATCAAGAGAGAAGAAACGGGACTAATGCAAGAATGGAAGAAATGGGAATCCAAGTACGAGCAGGACTTGAAAGGATTCATAGTTTTAAAGAAATGATGATCACTCAAACTGATGATGACAAGCAGATTGACATCGAAAGTGAGATCTCTGCATTAGAGCATATGTTCAAATGCTTCGACTTTGAGATATCCAAACAAACCAAGGTCAAGAAGCACCCTGTTGATCGCATTAATGCTGATAAGTGA

Coding sequence (CDS)

ATGGAATCTATAGACATCAACCGTGTTCGAGCTTTGTCCTCTCCTGAATTAGCAAATACTACCTTGATCAGTCCACGACAACATCATATTGATCAAAACTTTGTCGGAGTATCTACCAATGTGAGGCTTTTATTGAAACTAATCCATGAGTACAAAGAGGTTTCCATGAAAGGAAACGATGGAAGCAAAGATCAAAGGATATCTGAAATGATGCTTATAATTGATGAAGTGAAATCCCAAATCCAAAAATCTCGCTCTCTTGGTAAGAGAAGGGAAGCTGAGCTTAGAAGGTGCAATACGGATCTTAGGCGAAACGTTCCCAAGGACAAAAAGACGAATGAGCCAATAATAATCGATGAGAAGGAGAGGTTGAGGAGAGAGCTGAATGCAAGTGTGGCTTCACGTAAAAGCCTTGAAAGTATATGTTCGAGCATCGGAAAGGAGAAGGAGATCATCGCGAAGGAGCTAGCAAGGACGGTTCAACAATTGCACGGAATGGAAGAGCATGTTAATGATCTCAAAGCACAAAATGAAATGCTGATGTGCAAAGTTCAAGCTTGTGTTGCTGAGCATAGAGTGAAGAAAAACAATGTACCTGATGCACAAGGCAACTTTGAAGCCCTCCAAAAGAGAAACAAAGTGTTAACAGAACAACTTCTTAAGTCGCTCGATGCATACCGATCCTTAAAGCGAAAGCTAAAGGAATATCAAGAGAGAAGAAACGGGACTAATGCAAGAATGGAAGAAATGGGAATCCAAGTACGAGCAGGACTTGAAAGGATTCATAGTTTTAAAGAAATGATGATCACTCAAACTGATGATGACAAGCAGATTGACATCGAAAGTGAGATCTCTGCATTAGAGCATATGTTCAAATGCTTCGACTTTGAGATATCCAAACAAACCAAGGTCAAGAAGCACCCTGTTGATCGCATTAATGCTGATAAGTGA

Protein sequence

MESIDINRVRALSSPELANTTLISPRQHHIDQNFVGVSTNVRLLLKLIHEYKEVSMKGNDGSKDQRISEMMLIIDEVKSQIQKSRSLGKRREAELRRCNTDLRRNVPKDKKTNEPIIIDEKERLRRELNASVASRKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLMCKVQACVAEHRVKKNNVPDAQGNFEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQERRNGTNARMEEMGIQVRAGLERIHSFKEMMITQTDDDKQIDIESEISALEHMFKCFDFEISKQTKVKKHPVDRINADK*
Homology
[Close]
BLAST of Csa1G537380 vs. Swiss-Prot
Match: USO1_YEAST (Intracellular protein transport protein USO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=USO1 PE=1 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 3.2e-10
Identity = 64/300 (21.33%), Postives = 137/300 (45.67%), Query Frame = 1 

Query: 45   LKLIHEYKEVSMKGNDGSKDQRISEMMLIIDEVKSQIQKSRSLGKRREAELRRCNTDLRR 104
            + L+ E  E +   ND + + +ISE+    +E+++++   ++L    E +L      L  
Sbjct: 1056 ISLLKEKLETATTANDENVN-KISELTKTREELEAELAAYKNLKNELETKLETSEKAL-- 1115

Query: 105  NVPKDKKTNEPIIIDEKERLRRELNASVASRKSLESICSSIGKEKEIIAKELARTVQQLH 164
               K+ K NE  + +EK +L +E   +     SL +   S+ KE E +A +L +  +Q+ 
Sbjct: 1116 ---KEVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQIA 1175

Query: 165  GMEEHVND------------------LKAQNEMLMCKVQACVA----EHRVKKNNVPDAQ 224
              E   N+                  +K +N+ L  +V+A  +    +  +KK+ +    
Sbjct: 1176 NKERQYNEEISQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQSNLKKSEIDALN 1235

Query: 225  GNFEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQERRNGTNARMEEMGIQVRAGLERIH 284
               + L+K+N+     LL+S+ +  S   K+KE Q+  N     + E+  +++A  ++  
Sbjct: 1236 LQIKELKKKNETNEASLLESIKSVESETVKIKELQDECNFKEKEVSELEDKLKASEDKNS 1295

Query: 285  SFKEMM-----ITQTDDDKQIDIESEISALEHMFKCFDFEISKQTKVKK-HPVDRINADK 317
             + E+      I +  D K  +++ ++  + ++ K  +   S+ +++KK    +R NA++
Sbjct: 1296 KYLELQKESEKIKEELDAKTTELKIQLEKITNLSKAKEKSESELSRLKKTSSEERKNAEE 1349

[Close]
BLAST of Csa1G537380 vs. Swiss-Prot
Match: M21_STRPY (M protein, serotype 2.1 OS=Streptococcus pyogenes GN=emmL2.1 PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.8e-06
Identity = 57/260 (21.92%), Postives = 114/260 (43.85%), Query Frame = 1 

Query: 46  KLIHEYKEVSMKGNDGSKDQRISEMMLIIDEVKSQIQKSRSLGKRREAELRRCNTDLRRN 105
           K+  E+K+   K    S+D     +  +  E K Q ++ ++L +      R      +  
Sbjct: 87  KVEEEHKKDHEKLEKKSEDVERHYLRQLDQEYKEQQERQKNLEELERQSQREVEKRYQEQ 146

Query: 106 VPKDKKTNEPIIIDEKER--LRRELNASVASRKSLESICSSIGKEKEIIAKELARTVQQL 165
           + K ++  +   I E  R  LRR+L AS A++K LE+    + +EK+I         + L
Sbjct: 147 LQKQQQLEKEKQISEASRKSLRRDLEASRAAKKDLEAEHQKLKEEKQISEASRKSLRRDL 206

Query: 166 HGMEEHVNDLKAQNEMLMCKVQACVAEHRVKKNNVPDAQGNFEALQKRNKVLTEQLLKSL 225
                   DL+A+++ L  + Q   A  +    ++  ++   + L+  ++ L E+   S 
Sbjct: 207 EASRAAKKDLEAEHQKLKEEKQISEASRQGLSRDLEASRAAKKDLEAEHQKLKEEKQISE 266

Query: 226 DAYRSLKRKLKEYQERRNGTNARMEEMGIQVRAGLERIHSFKEMMITQTDDDK---QIDI 285
            + + L R L+  +E +    A + E   +++A LE+++   E     ++ +K   Q  +
Sbjct: 267 ASRQGLSRDLEASREAKKKVEADLAEANSKLQA-LEKLNKELEEGKKLSEKEKAELQAKL 326

Query: 286 ESEISALEHMFKCFDFEISK 301
           E+E  AL+        E++K
Sbjct: 327 EAEAKALKEQLAKQAEELAK 345

[Close]
BLAST of Csa1G537380 vs. TrEMBL
Match: A0A0A0LVR7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G537380 PE=4 SV=1)

HSP 1 Score: 616.3 bits (1588), Expect = 2.1e-173
Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 1 

Query: 1   MESIDINRVRALSSPELANTTLISPRQHHIDQNFVGVSTNVRLLLKLIHEYKEVSMKGND 60
           MESIDINRVRALSSPELANTTLISPRQHHIDQNFVGVSTNVRLLLKLIHEYKEVSMKGND
Sbjct: 1   MESIDINRVRALSSPELANTTLISPRQHHIDQNFVGVSTNVRLLLKLIHEYKEVSMKGND 60

Query: 61  GSKDQRISEMMLIIDEVKSQIQKSRSLGKRREAELRRCNTDLRRNVPKDKKTNEPIIIDE 120
           GSKDQRISEMMLIIDEVKSQIQKSRSLGKRREAELRRCNTDLRRNVPKDKKTNEPIIIDE
Sbjct: 61  GSKDQRISEMMLIIDEVKSQIQKSRSLGKRREAELRRCNTDLRRNVPKDKKTNEPIIIDE 120

Query: 121 KERLRRELNASVASRKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML 180
           KERLRRELNASVASRKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML
Sbjct: 121 KERLRRELNASVASRKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML 180

Query: 181 MCKVQACVAEHRVKKNNVPDAQGNFEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQERR 240
           MCKVQACVAEHRVKKNNVPDAQGNFEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQERR
Sbjct: 181 MCKVQACVAEHRVKKNNVPDAQGNFEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQERR 240

Query: 241 NGTNARMEEMGIQVRAGLERIHSFKEMMITQTDDDKQIDIESEISALEHMFKCFDFEISK 300
           NGTNARMEEMGIQVRAGLERIHSFKEMMITQTDDDKQIDIESEISALEHMFKCFDFEISK
Sbjct: 241 NGTNARMEEMGIQVRAGLERIHSFKEMMITQTDDDKQIDIESEISALEHMFKCFDFEISK 300

Query: 301 QTKVKKHPVDRINADK 317
           QTKVKKHPVDRINADK
Sbjct: 301 QTKVKKHPVDRINADK 316

[Close]
BLAST of Csa1G537380 vs. TrEMBL
Match: M5WHV6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009002mg PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 5.1e-87
Identity = 175/304 (57.57%), Postives = 234/304 (76.97%), Query Frame = 1 

Query: 6   INRVRALSSPEL----ANTTLISPRQHHIDQNFVGVSTNVRLLLKLIHEYKEVSMKGNDG 65
           +NR+RA SSP +    A++T  +P++   D +F G++TNV+LLLKLIH++ E   K ND 
Sbjct: 1   MNRIRAFSSPAVLPLPASST--TPKERPEDHSFDGIATNVKLLLKLIHDHNEACTKENDD 60

Query: 66  SKDQRISEMMLIIDEVKSQIQKSRSLGKRREAELRRCNTDLRRNVPKDKKTNEPIIIDEK 125
            K QR++ M+ IID+VK++IQKS+S+G+R  AELRRCNTDLR NVP+DK+  EPI IDEK
Sbjct: 61  RKTQRVAGMITIIDDVKTRIQKSQSIGRR--AELRRCNTDLRPNVPRDKRPTEPI-IDEK 120

Query: 126 ERLRRELNASVASRKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLM 185
           ERLR++L+AS+A+RKSLE +CSS+GKEKEIIA ELAR VQ+  GMEEH+NDL+AQNE L+
Sbjct: 121 ERLRKQLSASLAARKSLEIMCSSLGKEKEIIASELARKVQEFSGMEEHINDLRAQNEKLL 180

Query: 186 CKVQACVAEHRVKKNNVPDAQGNFEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQERRN 245
            KVQAC AEH+ KK    + QGN  ALQ+RNK L+EQLLKSLD  RSLKRK+K+ Q+  N
Sbjct: 181 AKVQACAAEHKEKKCGGVEIQGNV-ALQERNKALSEQLLKSLDGCRSLKRKIKDAQKENN 240

Query: 246 GTNARMEEMGIQVRAGLERIHSFKEMMITQTDDDKQIDIESEISALEHMFKCFDFEISKQ 305
           G ++ MEEMG++V+ GL+RI + +E  IT +D+++  D+E EISALE +F+CF   +SK 
Sbjct: 241 GMHSAMEEMGVEVQEGLDRIRALRE-KITTSDNEQATDVEEEISALERLFECFSTRVSKH 297

[Close]
BLAST of Csa1G537380 vs. TrEMBL
Match: A0A061E3T0_THECC (Myosin heavy chain-related, putative OS=Theobroma cacao GN=TCM_006069 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.5e-75
Identity = 161/300 (53.67%), Postives = 209/300 (69.67%), Query Frame = 1 

Query: 10  RALSSPELANTTLISPRQHHI---DQNFVGVSTNVRLLLKLIHEYKEVSMKGNDGSKDQR 69
           RA SSPE+A  +  S   HH+   D  F G++ NV+LLLKLIHE  + S    DG + QR
Sbjct: 7   RAYSSPEIARPS--SSDYHHVEGQDFTFEGIAANVKLLLKLIHEQSQASNGDQDGRRAQR 66

Query: 70  ISEMMLIIDEVKSQIQKSRSLGKRREAELRRCNTDLR-RNVPKDKKTNEPIIIDEKERLR 129
           ++ M+ I+D+VK++IQK          E RRCNTDLR    P+DKK+   ++IDEKE+LR
Sbjct: 67  VAGMISILDDVKTRIQKYSPPVGSSLKEFRRCNTDLRPHRAPRDKKSGADVVIDEKEKLR 126

Query: 130 RELNASVASRKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLMCKVQ 189
           REL+AS A+RKSLE++CSS+GKEKEI+A EL+R VQ+L+GMEE +NDLKAQNE L+ KVQ
Sbjct: 127 RELHASSAARKSLEAMCSSLGKEKEIMASELSRKVQELNGMEELINDLKAQNETLLAKVQ 186

Query: 190 ACVAEHRVKKNNVPDAQGNFEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQERRNGTNA 249
           AC AEHR KK+     QG   ALQ+RNK L+EQLLKSLD YRSLKRK K+ +E   G   
Sbjct: 187 ACAAEHREKKHGGDQTQGVNAALQERNKALSEQLLKSLDGYRSLKRKYKDAKEENVGIQT 246

Query: 250 RMEEMGIQVRAGLERIHSFKEMMITQTDDDKQIDIESEISALEHMFKCFDFEISKQTKVK 306
            MEEMG++V AGL  +H  K+ +     + ++ DIE EISALE MF+ F+ +ISK  + K
Sbjct: 247 TMEEMGVEVAAGLGGVHGLKQRL--AATEVREADIEREISALECMFESFNVKISKHMQKK 302

[Close]
BLAST of Csa1G537380 vs. TrEMBL
Match: A0A067G6Y2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021279mg PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 3.2e-73
Identity = 162/311 (52.09%), Postives = 217/311 (69.77%), Query Frame = 1 

Query: 10  RALSSPELANTTLISPRQHHIDQNFVGVSTNVRLLLKLIHEYKEVSMKGNDGSKDQRISE 69
           RA SSP+LA  +  S      D +F G++ NV+LLLKLI ++ E S K  D  K QRI+ 
Sbjct: 5   RAFSSPDLAKASS-SNADRPEDLSFEGIAANVKLLLKLIQDHTEASTKDQDHRKPQRIAG 64

Query: 70  MMLIIDEVKSQIQKSRSLGKRREAELRRCNTDLRRN-VPKDKKTNEPIIIDEKERLRREL 129
           M+ I+D+VK++IQKS+ + KR  AELRRCNTDLR N  P+DKK  EP I D+KE+LRR+L
Sbjct: 65  MITILDDVKTRIQKSQPVAKRSVAELRRCNTDLRPNRAPRDKKLCEP-ITDDKEKLRRQL 124

Query: 130 NASVASRKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLMCKVQACV 189
           +AS+A+RKSLE +CSS+GKEKEI+A ELAR V +L+ MEE +ND KAQN  L+ KVQ C 
Sbjct: 125 SASLAARKSLEVLCSSLGKEKEIMAGELARKVHELNEMEELINDFKAQNASLLAKVQNCA 184

Query: 190 AEHRVKKNNVPDAQGNFEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQERRNGTNARME 249
           AEH+ KK +  + QGN  ALQ+RNK L+E LLKSLD YRSLK+K K  +E      A ME
Sbjct: 185 AEHKEKKCSAGEIQGN-AALQERNKALSEHLLKSLDGYRSLKKKYKYVKEENTAMRATME 244

Query: 250 EMGIQVRAGLERIHSFKEMMITQTDDDKQIDIESEISALEHMFKCFDFEISKQTKVKK-- 309
           E+G +V AG+++I  F++ + T+  +++++DIE EI+ALE MF  F+ +I K  + K   
Sbjct: 245 ELGKKVEAGIDQILGFRQRIATK--EEQEVDIEEEITALEGMFDSFNMKIKKHIQNKSDC 304

Query: 310 -HPVDRINADK 317
             P   INA K
Sbjct: 305 GKPKAPINASK 310

[Close]
BLAST of Csa1G537380 vs. TrEMBL
Match: V4UDJ7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015995mg PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.2e-72
Identity = 161/311 (51.77%), Postives = 217/311 (69.77%), Query Frame = 1 

Query: 10  RALSSPELANTTLISPRQHHIDQNFVGVSTNVRLLLKLIHEYKEVSMKGNDGSKDQRISE 69
           RA SSP+LA  +  S      D +F G++ NV+LLLKLI ++ E S K  D  K QRI+ 
Sbjct: 5   RAFSSPDLAKASS-SNADRPEDLSFEGIAANVKLLLKLIQDHTEASTKDQDHRKPQRIAG 64

Query: 70  MMLIIDEVKSQIQKSRSLGKRREAELRRCNTDLRRN-VPKDKKTNEPIIIDEKERLRREL 129
           M+ I+D+VK++IQKS+ + KR  AELRRCNTDLR N  P+DKK  EP I D+KE+LRR+L
Sbjct: 65  MITILDDVKTRIQKSQPVAKRSVAELRRCNTDLRPNHAPRDKKLCEP-ITDDKEKLRRQL 124

Query: 130 NASVASRKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLMCKVQACV 189
           +AS+A+RKSLE +CSS+GKEKEI+A ELAR V +L+ MEE +ND KAQN  L+ KVQ C 
Sbjct: 125 SASLAARKSLEVLCSSLGKEKEIMAGELARKVHELNEMEELINDFKAQNASLLAKVQNCA 184

Query: 190 AEHRVKKNNVPDAQGNFEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQERRNGTNARME 249
           AEH+ KK +  + QGN  ALQ+RNK L+E LLKSLD YRSLK+K K+ +E      A ME
Sbjct: 185 AEHKEKKCSAGEIQGN-AALQERNKALSEHLLKSLDGYRSLKKKYKDAKEENTAMRATME 244

Query: 250 EMGIQVRAGLERIHSFKEMMITQTDDDKQIDIESEISALEHMFKCFDFEISKQTKVKK-- 309
           E+  +V AG+++I  F++ + T+  +++++DIE EI+ALE MF  F+ +I K  + K   
Sbjct: 245 ELEKKVEAGIDQILGFRQRIATK--EEQEVDIEEEITALEGMFDSFNMKIKKHIQNKSDC 304

Query: 310 -HPVDRINADK 317
             P   INA K
Sbjct: 305 GKPKAPINASK 310

[Close]
BLAST of Csa1G537380 vs. TAIR10
Match: AT4G03620.1 (AT4G03620.1 myosin heavy chain-related)

HSP 1 Score: 217.6 bits (553), Expect = 1.1e-56
Identity = 129/318 (40.57%), Postives = 193/318 (60.69%), Query Frame = 1 

Query: 2   ESIDINRVRALSSPEL---------ANTTLISPRQHHIDQNFVGVSTNVRLLLKLIHEYK 61
           E  +++R+RA S+P+L         ++ T     Q H D    G++TNV+LLLKL+ ++ 
Sbjct: 29  EPENMSRLRAFSAPDLVPSDSGSITSSPTRTIEHQSHEDSGLEGITTNVKLLLKLVQDHN 88

Query: 62  EVSMKGNDGSKDQRISEMMLIIDEVKSQIQKSRSLGKRREAELRRCNTDLRRNVPKDKKT 121
           E + + +D  K QR++ MM I+D++K++IQK++      + ELRRC TDL+R+    K  
Sbjct: 89  EATSRHHDDWKVQRVNTMMTILDDLKTRIQKAQQQSSSGKKELRRCYTDLKRSPDLTKSP 148

Query: 122 NEPIIIDEKE--RLRRELNASVASRKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHV 181
            +P   D ++  +LR+EL+AS+A+RKSL+ +CSS+GKEKEI+A EL+R   +L+ MEE V
Sbjct: 149 TKPPQNDPEDIQKLRKELSASMAARKSLQMMCSSLGKEKEIMALELSRKAHELNEMEELV 208

Query: 182 NDLKAQNEMLMCKVQACVAEHRVKKNNVPDAQG---NFEALQKRNKVLTEQLLKSLDAYR 241
           +D +AQNE L+ KVQ C  EH  +K    D  G   N   LQ RNK L+EQLLKS+D YR
Sbjct: 209 SDFRAQNEKLLKKVQNCAVEHNKEKKEDIDGPGPGDNNVPLQGRNKELSEQLLKSIDGYR 268

Query: 242 SLKRKLKEYQERRNGTNARMEEMGIQVRAGLERIHSFKEMMITQTDDDKQIDIESEISAL 301
           SLKRK K+ Q+        + +    V  G +R+    E  IT+ D   +++IE+EIS L
Sbjct: 269 SLKRKYKDVQDENGSMRRALRDYAEGVNVGTQRLTKLHE-KITRED---EVNIENEISNL 328

Query: 302 EHMFKCFDFEISKQTKVK 306
           E +F+    +I   ++ K
Sbjct: 329 EKLFQGLGLKILNHSQNK 342

[Close]
BLAST of Csa1G537380 vs. NCBI nr
Match: gi|449435874|ref|XP_004135719.1| (PREDICTED: paramyosin [Cucumis sativus])

HSP 1 Score: 616.3 bits (1588), Expect = 3.0e-173
Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 1 

Query: 1   MESIDINRVRALSSPELANTTLISPRQHHIDQNFVGVSTNVRLLLKLIHEYKEVSMKGND 60
           MESIDINRVRALSSPELANTTLISPRQHHIDQNFVGVSTNVRLLLKLIHEYKEVSMKGND
Sbjct: 1   MESIDINRVRALSSPELANTTLISPRQHHIDQNFVGVSTNVRLLLKLIHEYKEVSMKGND 60

Query: 61  GSKDQRISEMMLIIDEVKSQIQKSRSLGKRREAELRRCNTDLRRNVPKDKKTNEPIIIDE 120
           GSKDQRISEMMLIIDEVKSQIQKSRSLGKRREAELRRCNTDLRRNVPKDKKTNEPIIIDE
Sbjct: 61  GSKDQRISEMMLIIDEVKSQIQKSRSLGKRREAELRRCNTDLRRNVPKDKKTNEPIIIDE 120

Query: 121 KERLRRELNASVASRKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML 180
           KERLRRELNASVASRKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML
Sbjct: 121 KERLRRELNASVASRKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML 180

Query: 181 MCKVQACVAEHRVKKNNVPDAQGNFEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQERR 240
           MCKVQACVAEHRVKKNNVPDAQGNFEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQERR
Sbjct: 181 MCKVQACVAEHRVKKNNVPDAQGNFEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQERR 240

Query: 241 NGTNARMEEMGIQVRAGLERIHSFKEMMITQTDDDKQIDIESEISALEHMFKCFDFEISK 300
           NGTNARMEEMGIQVRAGLERIHSFKEMMITQTDDDKQIDIESEISALEHMFKCFDFEISK
Sbjct: 241 NGTNARMEEMGIQVRAGLERIHSFKEMMITQTDDDKQIDIESEISALEHMFKCFDFEISK 300

Query: 301 QTKVKKHPVDRINADK 317
           QTKVKKHPVDRINADK
Sbjct: 301 QTKVKKHPVDRINADK 316

[Close]
BLAST of Csa1G537380 vs. NCBI nr
Match: gi|659068507|ref|XP_008444778.1| (PREDICTED: probable kinetochore protein nuf2 [Cucumis melo])

HSP 1 Score: 568.5 bits (1464), Expect = 7.1e-159
Identity = 293/320 (91.56%), Postives = 304/320 (95.00%), Query Frame = 1 

Query: 1   MESIDINRVRALSSPELANTTLISPRQHHIDQNFVGVSTNVRLLLKLIHEYKEVSMKGND 60
           MESIDINRVRALSSPELAN  L SPRQHH+DQNFVGVSTNVR+LLKLIHEYKE S+KGND
Sbjct: 1   MESIDINRVRALSSPELANP-LTSPRQHHVDQNFVGVSTNVRILLKLIHEYKEASVKGND 60

Query: 61  GSKDQRISEMMLIIDEVKSQIQKSRSLGKRREAELRRCNTDLRRNVPKDKKTNEPIIIDE 120
           GSK+QRISEMM IIDEVKSQI KS+SLGKR+EA LRRCNTDLRRNVPKDKKTNEPII DE
Sbjct: 61  GSKNQRISEMMQIIDEVKSQILKSQSLGKRKEAALRRCNTDLRRNVPKDKKTNEPIITDE 120

Query: 121 KERLRRELNASVASRKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML 180
           KERLRRELNASVA+RKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML
Sbjct: 121 KERLRRELNASVAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML 180

Query: 181 MCKVQACVAEHRVKKNNVPDAQGNFEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQERR 240
           MCKVQACVAEHRVKKNNVPDAQGN EALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQE+R
Sbjct: 181 MCKVQACVAEHRVKKNNVPDAQGNIEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQEKR 240

Query: 241 NGTNARMEEMGIQVRAGLERIHSFKEMMITQTDDDKQIDIESEISALEHMFKCFDFEISK 300
           NGTNARMEEMGIQVRAGL RIHSFKEMMITQTDD+KQIDIE EISALEHMFKCFDFEISK
Sbjct: 241 NGTNARMEEMGIQVRAGLNRIHSFKEMMITQTDDEKQIDIEQEISALEHMFKCFDFEISK 300

Query: 301 QTKVKKHPV----DRINADK 317
           Q K+KKHP+    DRINADK
Sbjct: 301 QVKIKKHPLECKHDRINADK 319

[Close]
BLAST of Csa1G537380 vs. NCBI nr
Match: gi|595863841|ref|XP_007211662.1| (hypothetical protein PRUPE_ppa009002mg [Prunus persica])

HSP 1 Score: 329.3 bits (843), Expect = 7.3e-87
Identity = 175/304 (57.57%), Postives = 234/304 (76.97%), Query Frame = 1 

Query: 6   INRVRALSSPEL----ANTTLISPRQHHIDQNFVGVSTNVRLLLKLIHEYKEVSMKGNDG 65
           +NR+RA SSP +    A++T  +P++   D +F G++TNV+LLLKLIH++ E   K ND 
Sbjct: 1   MNRIRAFSSPAVLPLPASST--TPKERPEDHSFDGIATNVKLLLKLIHDHNEACTKENDD 60

Query: 66  SKDQRISEMMLIIDEVKSQIQKSRSLGKRREAELRRCNTDLRRNVPKDKKTNEPIIIDEK 125
            K QR++ M+ IID+VK++IQKS+S+G+R  AELRRCNTDLR NVP+DK+  EPII DEK
Sbjct: 61  RKTQRVAGMITIIDDVKTRIQKSQSIGRR--AELRRCNTDLRPNVPRDKRPTEPII-DEK 120

Query: 126 ERLRRELNASVASRKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLM 185
           ERLR++L+AS+A+RKSLE +CSS+GKEKEIIA ELAR VQ+  GMEEH+NDL+AQNE L+
Sbjct: 121 ERLRKQLSASLAARKSLEIMCSSLGKEKEIIASELARKVQEFSGMEEHINDLRAQNEKLL 180

Query: 186 CKVQACVAEHRVKKNNVPDAQGNFEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQERRN 245
            KVQAC AEH+ KK    + QGN  ALQ+RNK L+EQLLKSLD  RSLKRK+K+ Q+  N
Sbjct: 181 AKVQACAAEHKEKKCGGVEIQGNV-ALQERNKALSEQLLKSLDGCRSLKRKIKDAQKENN 240

Query: 246 GTNARMEEMGIQVRAGLERIHSFKEMMITQTDDDKQIDIESEISALEHMFKCFDFEISKQ 305
           G ++ MEEMG++V+ GL+RI + +E  IT +D+++  D+E EISALE +F+CF   +SK 
Sbjct: 241 GMHSAMEEMGVEVQEGLDRIRALRE-KITTSDNEQATDVEEEISALERLFECFSTRVSKH 297

[Close]
BLAST of Csa1G537380 vs. NCBI nr
Match: gi|645238160|ref|XP_008225545.1| (PREDICTED: flagellar attachment zone protein 1 [Prunus mume])

HSP 1 Score: 328.2 bits (840), Expect = 1.6e-86
Identity = 176/304 (57.89%), Postives = 233/304 (76.64%), Query Frame = 1 

Query: 6   INRVRALSSPEL----ANTTLISPRQHHIDQNFVGVSTNVRLLLKLIHEYKEVSMKGNDG 65
           +NR+RA SSP +    A++T  +P++   D +F G++TNV+LLLKLIH++ E   K ND 
Sbjct: 1   MNRIRAFSSPAVLPLPASST--TPKERPEDHSFDGIATNVKLLLKLIHDHNEACTKENDD 60

Query: 66  SKDQRISEMMLIIDEVKSQIQKSRSLGKRREAELRRCNTDLRRNVPKDKKTNEPIIIDEK 125
            K QR++ M+ IID+VK++IQKS+S+G+R  AELRRCNTDLR NVP+DK+  EPII DEK
Sbjct: 61  RKTQRVAGMITIIDDVKTRIQKSQSIGRR--AELRRCNTDLRPNVPRDKRPTEPII-DEK 120

Query: 126 ERLRRELNASVASRKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLM 185
           ERLRR+L+AS+A+RKSLE +CSS+GKEKEIIA ELAR VQ+  GMEEH+NDL+AQNE L+
Sbjct: 121 ERLRRQLSASLAARKSLEIMCSSLGKEKEIIASELARKVQEFSGMEEHINDLRAQNEKLL 180

Query: 186 CKVQACVAEHRVKKNNVPDAQGNFEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQERRN 245
            KVQAC AEH+ K+    + QGN  ALQ+RNK L+EQLLKSLD  RSLKRK+K+ Q+  N
Sbjct: 181 AKVQACAAEHKEKRCGGVEIQGNV-ALQERNKALSEQLLKSLDGCRSLKRKIKDAQKENN 240

Query: 246 GTNARMEEMGIQVRAGLERIHSFKEMMITQTDDDKQIDIESEISALEHMFKCFDFEISKQ 305
           G ++ MEEMG++V+ GL+ I + KE  IT +D+++  D+E EISALE +F+CF   ISK 
Sbjct: 241 GMHSAMEEMGVEVQEGLDLIRALKE-KITTSDNEQATDVEEEISALERLFECFSTRISKH 297

[Close]
BLAST of Csa1G537380 vs. NCBI nr
Match: gi|1009174678|ref|XP_015868467.1| (PREDICTED: uncharacterized protein LOC107405889 [Ziziphus jujuba])

HSP 1 Score: 310.5 bits (794), Expect = 3.5e-81
Identity = 173/301 (57.48%), Postives = 227/301 (75.42%), Query Frame = 1 

Query: 6   INRVRALSSPELANTTLISPRQHHIDQNFVGVSTNVRLLLKLIHEYKEVSMKGNDGSKDQ 65
           ++RVRALSSPEL +T   + R+   D +  G++TNV+LLLKLI +  E   K  D  K Q
Sbjct: 1   MSRVRALSSPELPSTA--NSRERPEDHSLEGIATNVKLLLKLIQDQNEACAKDVDERKAQ 60

Query: 66  RISEMMLIIDEVKSQIQKSRSLGKRREAELRRCNTDLRRNVPKDKKTNEPIIIDEKERLR 125
           R++ MM IID+VK++IQK +S+G+R  AELRRCNTDLR +VPKDKK +EPI  DEKE+LR
Sbjct: 61  RVAGMMSIIDDVKARIQKFQSVGRR--AELRRCNTDLRPHVPKDKKASEPIT-DEKEKLR 120

Query: 126 RELNASVASRKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLMCKVQ 185
           REL+AS+A+RKSLE +CSS+GKE+EIIA ELAR V +L+G+EE VNDL+AQN+ L+ KVQ
Sbjct: 121 RELSASLAARKSLEIMCSSVGKEREIIATELARKVHELNGLEELVNDLRAQNDKLLAKVQ 180

Query: 186 ACVAEHRVKKN-NVPDAQGNFEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQERRNGTN 245
           AC AEH+ KK+ +  D QGN  ALQ+RNK L+EQLLKSLD YRSLKRKLK+ QE    + 
Sbjct: 181 ACAAEHKEKKSISGEDTQGN-AALQERNKALSEQLLKSLDGYRSLKRKLKDSQEENIKSQ 240

Query: 246 ARMEEMGIQVRAGLERIHSFKEMMITQTDDDKQIDIESEISALEHMFKCFDFEISKQTKV 305
             MEEMG++ +AGL+ + S +E   T  ++D   DI+ EISALE++F+ F+ +ISK  K 
Sbjct: 241 TTMEEMGMEAQAGLDHVRSLRERFATWNEEDD--DIDKEISALENLFESFNMKISKHGKK 293

The following BLAST results are available for this feature:
BLAST of Csa1G537380 vs. Swiss-Prot
Match NameE-valueIdentityDescription
USO1_YEAST3.2e-1021.33Intracellular protein transport protein USO1 OS=Saccharomyces cerevisiae (strain... [more]
M21_STRPY2.8e-0621.92M protein, serotype 2.1 OS=Streptococcus pyogenes GN=emmL2.1 PE=3 SV=1[more]
BLAST of Csa1G537380 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVR7_CUCSA2.1e-173100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G537380 PE=4 SV=1[more]
M5WHV6_PRUPE5.1e-8757.57Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009002mg PE=4 SV=1[more]
A0A061E3T0_THECC1.5e-7553.67Myosin heavy chain-related, putative OS=Theobroma cacao GN=TCM_006069 PE=4 SV=1[more]
A0A067G6Y2_CITSI3.2e-7352.09Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021279mg PE=4 SV=1[more]
V4UDJ7_9ROSI1.2e-7251.77Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015995mg PE=4 SV=1[more]
BLAST of Csa1G537380 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G03620.11.1e-5640.57 myosin heavy chain-related[more]
BLAST of Csa1G537380 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449435874|ref|XP_004135719.1|3.0e-173100.00PREDICTED: paramyosin [Cucumis sativus][more]
gi|659068507|ref|XP_008444778.1|7.1e-15991.56PREDICTED: probable kinetochore protein nuf2 [Cucumis melo][more]
gi|595863841|ref|XP_007211662.1|7.3e-8757.57hypothetical protein PRUPE_ppa009002mg [Prunus persica][more]
gi|645238160|ref|XP_008225545.1|1.6e-8657.89PREDICTED: flagellar attachment zone protein 1 [Prunus mume][more]
gi|1009174678|ref|XP_015868467.1|3.5e-8157.48PREDICTED: uncharacterized protein LOC107405889 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016043 cellular component organization
biological_process GO:0048868 pollen tube development
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU096227cucumber EST collection version 3.0transcribed_cluster
CU118863cucumber EST collection version 3.0transcribed_cluster
CU148180cucumber EST collection version 3.0transcribed_cluster
CU169810cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G537380.1Csa1G537380.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU096227CU096227transcribed_cluster
CU148180CU148180transcribed_cluster
CU169810CU169810transcribed_cluster
CU118863CU118863transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 156..176
score: -coord: 219..253
scor
NoneNo IPR availablePANTHERPTHR38378FAMILY NOT NAMEDcoord: 5..306
score: 3.0