CU169810 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU169810
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 19376837 .. 19377025 (+)
Sequence length191
The following sequences are available for this feature:

transcribed_cluster sequence

TCTTTTGGAGGGCTTCAAAGTTGCCTTGTGTCTATCAGGTACATTGTTTTTCTTCACTCTATGCTCAGCAACACAAGCTTGAACTTTGCACATCAGCATTTCATTTTGTGCTTTGAGATCATTAACATGCTCTTCCATTCCGTGCAATTGTTGAACCGTCCTTGCTAGCTCCTTCGACGATGATCTCCTTC
BLAST of CU169810 vs. TrEMBL
Match: A0A0A0LVR7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G537380 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 9.9e-19
Identity = 47/48 (97.92%), Postives = 48/48 (100.00%), Query Frame = -3

Query: 34  SKELARTVQQLHGMEEHVNDLKAQNEMLMCKVQACVAEHRVKKNNVPD 93
           +KELARTVQQLHGMEEHVNDLKAQNEMLMCKVQACVAEHRVKKNNVPD
Sbjct: 153 AKELARTVQQLHGMEEHVNDLKAQNEMLMCKVQACVAEHRVKKNNVPD 200

Query: 94  153
           
Sbjct: 213 200

Query: 154 178
           
Sbjct: 273 200

BLAST of CU169810 vs. TrEMBL
Match: M5WHV6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009002mg PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 3.5e-08
Identity = 29/43 (67.44%), Postives = 35/43 (81.40%), Query Frame = -3

Query: 49  SKELARTVQQLHGMEEHVNDLKAQNEMLMCKVQACVAEHRVKK 108
           + ELAR VQ+  GMEEH+NDL+AQNE L+ KVQAC AEH+ KK
Sbjct: 147 ASELARKVQEFSGMEEHINDLRAQNEKLLAKVQACAAEHKEKK 189

Query: 109 168
           
Sbjct: 207 189

Query: 169 178
           
Sbjct: 267 189

BLAST of CU169810 vs. TrEMBL
Match: A0A061E3T0_THECC (Myosin heavy chain-related, putative OS=Theobroma cacao GN=TCM_006069 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 4.6e-08
Identity = 30/44 (68.18%), Postives = 37/44 (84.09%), Query Frame = -3

Query: 46  SKELARTVQQLHGMEEHVNDLKAQNEMLMCKVQACVAEHRVKKN 105
           + EL+R VQ+L+GMEE +NDLKAQNE L+ KVQAC AEHR KK+
Sbjct: 152 ASELSRKVQELNGMEELINDLKAQNETLLAKVQACAAEHREKKH 195

Query: 106 165
           
Sbjct: 212 195

Query: 166 178
           
Sbjct: 272 195

BLAST of CU169810 vs. TrEMBL
Match: W1PXG7_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00025p00209310 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 8.7e-07
Identity = 27/43 (62.79%), Postives = 34/43 (79.07%), Query Frame = -3

Query: 49  SKELARTVQQLHGMEEHVNDLKAQNEMLMCKVQACVAEHRVKK 108
           S ELAR VQ++ GMEEH+NDLKAQNE L+ KVQ C  EH+ ++
Sbjct: 140 SAELARKVQEIGGMEEHLNDLKAQNEKLLAKVQTCANEHKERR 182

Query: 109 168
           
Sbjct: 200 182

Query: 169 178
           
Sbjct: 260 182

BLAST of CU169810 vs. TrEMBL
Match: A0A0K9QQ10_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_154520 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.9e-06
Identity = 26/39 (66.67%), Postives = 33/39 (84.62%), Query Frame = -3

Query: 61  SKELARTVQQLHGMEEHVNDLKAQNEMLMCKVQACVAEH 120
           S+EL R VQ+L+ MEEH+NDL+AQNE L  K+QACVA+H
Sbjct: 95  SRELTRKVQELNEMEEHINDLRAQNERLSTKIQACVADH 133

Query: 121 178
           
Sbjct: 155 133

BLAST of CU169810 vs. NCBI nr
Match: gi|659068507|ref|XP_008444778.1| (PREDICTED: probable kinetochore protein nuf2 [Cucumis melo])

HSP 1 Score: 97.8 bits (242), Expect = 7.1e-18
Identity = 47/48 (97.92%), Postives = 48/48 (100.00%), Query Frame = -3

Query: 34  SKELARTVQQLHGMEEHVNDLKAQNEMLMCKVQACVAEHRVKKNNVPD 93
           +KELARTVQQLHGMEEHVNDLKAQNEMLMCKVQACVAEHRVKKNNVPD
Sbjct: 152 AKELARTVQQLHGMEEHVNDLKAQNEMLMCKVQACVAEHRVKKNNVPD 199

Query: 94  153
           
Sbjct: 212 199

Query: 154 178
           
Sbjct: 272 199

BLAST of CU169810 vs. NCBI nr
Match: gi|449435874|ref|XP_004135719.1| (PREDICTED: paramyosin [Cucumis sativus])

HSP 1 Score: 97.8 bits (242), Expect = 7.1e-18
Identity = 47/48 (97.92%), Postives = 48/48 (100.00%), Query Frame = -3

Query: 34  SKELARTVQQLHGMEEHVNDLKAQNEMLMCKVQACVAEHRVKKNNVPD 93
           +KELARTVQQLHGMEEHVNDLKAQNEMLMCKVQACVAEHRVKKNNVPD
Sbjct: 153 AKELARTVQQLHGMEEHVNDLKAQNEMLMCKVQACVAEHRVKKNNVPD 200

Query: 94  153
           
Sbjct: 213 200

Query: 154 178
           
Sbjct: 273 200

BLAST of CU169810 vs. NCBI nr
Match: gi|720088692|ref|XP_010244538.1| (PREDICTED: uncharacterized protein LOC104588352 [Nelumbo nucifera])

HSP 1 Score: 63.5 bits (153), Expect = 1.5e-07
Identity = 30/40 (75.00%), Postives = 34/40 (85.00%), Query Frame = -3

Query: 52  ELARTVQQLHGMEEHVNDLKAQNEMLMCKVQACVAEHRVK 111
           ELAR V QL+GMEEH+NDLKAQNEML+ KVQ C AEH+ K
Sbjct: 413 ELARKVHQLNGMEEHLNDLKAQNEMLLAKVQTCAAEHKEK 452

Query: 112 171
           
Sbjct: 473 452

BLAST of CU169810 vs. NCBI nr
Match: gi|657960174|ref|XP_008371655.1| (PREDICTED: centrosomal protein of 135 kDa [Malus domestica])

HSP 1 Score: 63.2 bits (152), Expect = 1.9e-07
Identity = 29/43 (67.44%), Postives = 36/43 (83.72%), Query Frame = -3

Query: 49  SKELARTVQQLHGMEEHVNDLKAQNEMLMCKVQACVAEHRVKK 108
           + ELAR V +L GMEEH+NDL+AQNEML+ KVQAC AEH+ K+
Sbjct: 145 ASELARKVHELTGMEEHINDLRAQNEMLLAKVQACAAEHKEKR 187

Query: 109 168
           
Sbjct: 205 187

Query: 169 178
           
Sbjct: 265 187

BLAST of CU169810 vs. NCBI nr
Match: gi|595863841|ref|XP_007211662.1| (hypothetical protein PRUPE_ppa009002mg [Prunus persica])

HSP 1 Score: 62.8 bits (151), Expect = 2.5e-07
Identity = 29/43 (67.44%), Postives = 35/43 (81.40%), Query Frame = -3

Query: 49  SKELARTVQQLHGMEEHVNDLKAQNEMLMCKVQACVAEHRVKK 108
           + ELAR VQ+  GMEEH+NDL+AQNE L+ KVQAC AEH+ KK
Sbjct: 147 ASELARKVQEFSGMEEHINDLRAQNEKLLAKVQACAAEHKEKK 189

Query: 109 168
           
Sbjct: 207 189

Query: 169 178
           
Sbjct: 267 189

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LVR7_CUCSA9.9e-1997.92Uncharacterized protein OS=Cucumis sativus GN=Csa_1G537380 PE=4 SV=1[more]
M5WHV6_PRUPE3.5e-0867.44Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009002mg PE=4 SV=1[more]
A0A061E3T0_THECC4.6e-0868.18Myosin heavy chain-related, putative OS=Theobroma cacao GN=TCM_006069 PE=4 SV=1[more]
W1PXG7_AMBTC8.7e-0762.79Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00025p00209310 PE=4 SV=... [more]
A0A0K9QQ10_SPIOL1.9e-0666.67Uncharacterized protein OS=Spinacia oleracea GN=SOVF_154520 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659068507|ref|XP_008444778.1|7.1e-1897.92PREDICTED: probable kinetochore protein nuf2 [Cucumis melo][more]
gi|449435874|ref|XP_004135719.1|7.1e-1897.92PREDICTED: paramyosin [Cucumis sativus][more]
gi|720088692|ref|XP_010244538.1|1.5e-0775.00PREDICTED: uncharacterized protein LOC104588352 [Nelumbo nucifera][more]
gi|657960174|ref|XP_008371655.1|1.9e-0767.44PREDICTED: centrosomal protein of 135 kDa [Malus domestica][more]
gi|595863841|ref|XP_007211662.1|2.5e-0767.44hypothetical protein PRUPE_ppa009002mg [Prunus persica][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G537380Csa1G537380gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0132751H0132751EST