Carg25461-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25461-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Myosin heavy chain-related, putative
Location	Cucurbita_argyrosperma_scaffold_256 : 142713 .. 143731 (-)
Sequence length	939

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTCCGCCGGCACCACCCGCATTCGAGCATTGTCGTCCCCTGAATTAGTCGAGGGCTCCACAAGTCCACAACAACCACATGTCGATCAAAACTTCATTGGTTTGACGACTTGTTCTGTTTTTTTTTTTTTTTTTAGTTTCTTTTCGAGATATATGATGAGTTTGTTTTTGATTGATTAGGAGTATCTACGAATGTGAGGATTTTGTTGAAACTAATCCACGAGTACAAAGAGGCTTCCACGAAAGGAAACAATGGGAGTAGAGATCAAAGGATATCTGAAATGATGCTTATACTTGATGAAGTCAAATCCCAAATCCAAAGAGCACAAGTTCTTGGTAAGCGAAGGGAAGCCGGGCTTCGAAGGTGCAACACGGATCTTAGGCGAAACGTTCCGAGGGACAAAAAACCGACGAACGAACCAATAACCGATGAGAAGGAGAAGTTGAGGAGAGAGCTGAATGCAAGCATAGCAGCTCGGAAAAGCCTCGAGAGCATATGCTCAAGCATCGGAAAGGAGAAGGAGATCATCGCGAAGGAGCTAGCGAGGACGGTTCAACAATTGCATGGAATGGAAGAACATGTGAATGATCTCAAAGCACAAAATGAAATGCTAATGTGCAAAGTTCAAGCTTGTGTTGCAGAGCATAGAGGGTTAAAAAACAACAATCTACCTGATGCCCAAGGCAGCATTGAAGCCCTCCAAAAACGAAACAAAGCCTTGACCGAACAGCTTCTCAAGTCGCTCGACGCCTACCGATCCTTGAAGCGAAAGCTCAAAGAATATCAAGAGAGAAGAAATGGGGCTAATGCAAGAATGGAAGAAATGGGACACCGAGTTCGAGTCGGACTCGATAGGATTCATAGTTTCAAAGAAATGATCATACAAAGCGACGACGACAATCAAATCGACATTGAGCATGAGATCTCTGAATTGGAACATATGTTCAAATGCTTCGACTCCGAGATATCCAAACACGTCAAGATCAAGAAACACGAGCGCGTCAATACCGATTAG

mRNA sequence

ATGGACTCCGCCGGCACCACCCGCATTCGAGCATTGTCGTCCCCTGAATTAGTCGAGGGCTCCACAAGTCCACAACAACCACATGTCGATCAAAACTTCATTGGAGTATCTACGAATGTGAGGATTTTGTTGAAACTAATCCACGAGTACAAAGAGGCTTCCACGAAAGGAAACAATGGGAGTAGAGATCAAAGGATATCTGAAATGATGCTTATACTTGATGAAGTCAAATCCCAAATCCAAAGAGCACAAGTTCTTGGTAAGCGAAGGGAAGCCGGGCTTCGAAGGTGCAACACGGATCTTAGGCGAAACGTTCCGAGGGACAAAAAACCGACGAACGAACCAATAACCGATGAGAAGGAGAAGTTGAGGAGAGAGCTGAATGCAAGCATAGCAGCTCGGAAAAGCCTCGAGAGCATATGCTCAAGCATCGGAAAGGAGAAGGAGATCATCGCGAAGGAGCTAGCGAGGACGGTTCAACAATTGCATGGAATGGAAGAACATGTGAATGATCTCAAAGCACAAAATGAAATGCTAATGTGCAAAGTTCAAGCTTGTGTTGCAGAGCATAGAGGGTTAAAAAACAACAATCTACCTGATGCCCAAGGCAGCATTGAAGCCCTCCAAAAACGAAACAAAGCCTTGACCGAACAGCTTCTCAAGTCGCTCGACGCCTACCGATCCTTGAAGCGAAAGCTCAAAGAATATCAAGAGAGAAGAAATGGGGCTAATGCAAGAATGGAAGAAATGGGACACCGAGTTCGAGTCGGACTCGATAGGATTCATAGTTTCAAAGAAATGATCATACAAAGCGACGACGACAATCAAATCGACATTGAGCATGAGATCTCTGAATTGGAACATATGTTCAAATGCTTCGACTCCGAGATATCCAAACACGTCAAGATCAAGAAACACGAGCGCGTCAATACCGATTAG

Coding sequence (CDS)

ATGGACTCCGCCGGCACCACCCGCATTCGAGCATTGTCGTCCCCTGAATTAGTCGAGGGCTCCACAAGTCCACAACAACCACATGTCGATCAAAACTTCATTGGAGTATCTACGAATGTGAGGATTTTGTTGAAACTAATCCACGAGTACAAAGAGGCTTCCACGAAAGGAAACAATGGGAGTAGAGATCAAAGGATATCTGAAATGATGCTTATACTTGATGAAGTCAAATCCCAAATCCAAAGAGCACAAGTTCTTGGTAAGCGAAGGGAAGCCGGGCTTCGAAGGTGCAACACGGATCTTAGGCGAAACGTTCCGAGGGACAAAAAACCGACGAACGAACCAATAACCGATGAGAAGGAGAAGTTGAGGAGAGAGCTGAATGCAAGCATAGCAGCTCGGAAAAGCCTCGAGAGCATATGCTCAAGCATCGGAAAGGAGAAGGAGATCATCGCGAAGGAGCTAGCGAGGACGGTTCAACAATTGCATGGAATGGAAGAACATGTGAATGATCTCAAAGCACAAAATGAAATGCTAATGTGCAAAGTTCAAGCTTGTGTTGCAGAGCATAGAGGGTTAAAAAACAACAATCTACCTGATGCCCAAGGCAGCATTGAAGCCCTCCAAAAACGAAACAAAGCCTTGACCGAACAGCTTCTCAAGTCGCTCGACGCCTACCGATCCTTGAAGCGAAAGCTCAAAGAATATCAAGAGAGAAGAAATGGGGCTAATGCAAGAATGGAAGAAATGGGACACCGAGTTCGAGTCGGACTCGATAGGATTCATAGTTTCAAAGAAATGATCATACAAAGCGACGACGACAATCAAATCGACATTGAGCATGAGATCTCTGAATTGGAACATATGTTCAAATGCTTCGACTCCGAGATATCCAAACACGTCAAGATCAAGAAACACGAGCGCGTCAATACCGATTAG

Protein sequence

MDSAGTTRIRALSSPELVEGSTSPQQPHVDQNFIGVSTNVRILLKLIHEYKEASTKGNNGSRDQRISEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRNVPRDKKPTNEPITDEKEKLRRELNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLMCKVQACVAEHRGLKNNNLPDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQERRNGANARMEEMGHRVRVGLDRIHSFKEMIIQSDDDNQIDIEHEISELEHMFKCFDSEISKHVKIKKHERVNTD

Homology

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BLAST of Carg25461-RA vs. NCBI nr
Match: XP_023519118.1 (uncharacterized protein LOC111782578 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 587.8 bits (1514), Expect = 2.2e-164
Identity = 308/312 (98.72%), Postives = 310/312 (99.36%), Query Frame = 0


Query: 1   MDSAGTTRIRALSSPELVEGSTSPQQPHVDQNFIGVSTNVRILLKLIHEYKEASTKGNNG 60
           MDSAG TRIRALSSPELVEGSTSP+QPHVDQNFIGVSTNVR LLKLIHEYKEASTKGNNG
Sbjct: 1   MDSAGITRIRALSSPELVEGSTSPRQPHVDQNFIGVSTNVRSLLKLIHEYKEASTKGNNG 60

Query: 61  SRDQRISEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRNVPRDKKPTNEPITDEK 120
           SRDQRISEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRNVPRDKKP+NEPITDEK
Sbjct: 61  SRDQRISEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRNVPRDKKPSNEPITDEK 120

Query: 121 EKLRRELNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLM 180
           EKLRRELNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLM
Sbjct: 121 EKLRRELNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLM 180

Query: 181 CKVQACVAEHRGLKNNNLPDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQERR 240
           CKVQACVAEHRGLKNNNLPDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQERR
Sbjct: 181 CKVQACVAEHRGLKNNNLPDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQERR 240

Query: 241 NGANARMEEMGHRVRVGLDRIHSFKEMIIQSDDDNQIDIEHEISELEHMFKCFDSEISKH 300
           NGANARMEEMGHRVRVGLDRIHSFKEMIIQSDDDNQIDIEHEISELEHMFKCFDSEISKH
Sbjct: 241 NGANARMEEMGHRVRVGLDRIHSFKEMIIQSDDDNQIDIEHEISELEHMFKCFDSEISKH 300

Query: 301 VKIKKHERVNTD 313
           VKIKKHERVNTD
Sbjct: 301 VKIKKHERVNTD 312

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BLAST of Carg25461-RA vs. NCBI nr
Match: XP_022927627.1 (uncharacterized protein LOC111434395 [Cucurbita moschata])

HSP 1 Score: 585.5 bits (1508), Expect = 1.1e-163
Identity = 307/312 (98.40%), Postives = 310/312 (99.36%), Query Frame = 0


Query: 1   MDSAGTTRIRALSSPELVEGSTSPQQPHVDQNFIGVSTNVRILLKLIHEYKEASTKGNNG 60
           MDSAG TRIRALSSPELVEGSTSP+QPHVDQNFIGVSTNVRILLKLIHEYKEASTKGNNG
Sbjct: 1   MDSAGITRIRALSSPELVEGSTSPRQPHVDQNFIGVSTNVRILLKLIHEYKEASTKGNNG 60

Query: 61  SRDQRISEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRNVPRDKKPTNEPITDEK 120
           SRDQRISEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRNVPRDKKPTNEPITDEK
Sbjct: 61  SRDQRISEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRNVPRDKKPTNEPITDEK 120

Query: 121 EKLRRELNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLM 180
           EKLRRELNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLM
Sbjct: 121 EKLRRELNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLM 180

Query: 181 CKVQACVAEHRGLKNNNLPDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQERR 240
           CKVQACVAEHRGLKNNN+ DAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQERR
Sbjct: 181 CKVQACVAEHRGLKNNNVSDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQERR 240

Query: 241 NGANARMEEMGHRVRVGLDRIHSFKEMIIQSDDDNQIDIEHEISELEHMFKCFDSEISKH 300
           NGANARMEEMGHRVRVGLDRIHSFKEMIIQSDDDNQIDIEHEISELEHMFKCFDSEISKH
Sbjct: 241 NGANARMEEMGHRVRVGLDRIHSFKEMIIQSDDDNQIDIEHEISELEHMFKCFDSEISKH 300

Query: 301 VKIKKHERVNTD 313
           VKIKKHERV+TD
Sbjct: 301 VKIKKHERVSTD 312

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BLAST of Carg25461-RA vs. NCBI nr
Match: XP_023001447.1 (uncharacterized protein LOC111495578 [Cucurbita maxima])

HSP 1 Score: 583.9 bits (1504), Expect = 3.1e-163
Identity = 304/312 (97.44%), Postives = 310/312 (99.36%), Query Frame = 0


Query: 1   MDSAGTTRIRALSSPELVEGSTSPQQPHVDQNFIGVSTNVRILLKLIHEYKEASTKGNNG 60
           M+SAG TRIRALSSPELVEGSTSP+QPHVDQNFIGVSTNVRILLKLIHEYKEAS KGNNG
Sbjct: 1   MESAGITRIRALSSPELVEGSTSPRQPHVDQNFIGVSTNVRILLKLIHEYKEASMKGNNG 60

Query: 61  SRDQRISEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRNVPRDKKPTNEPITDEK 120
           SRDQRISEMMLILDEVKSQIQRAQ+LGKR+EAGLRRCNTDLRRNVPRDKKPTNEPITDEK
Sbjct: 61  SRDQRISEMMLILDEVKSQIQRAQILGKRKEAGLRRCNTDLRRNVPRDKKPTNEPITDEK 120

Query: 121 EKLRRELNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLM 180
           EKLRRELNAS+AARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLM
Sbjct: 121 EKLRRELNASMAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLM 180

Query: 181 CKVQACVAEHRGLKNNNLPDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQERR 240
           CKVQACVAEHRGLKNNN+PDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQERR
Sbjct: 181 CKVQACVAEHRGLKNNNVPDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQERR 240

Query: 241 NGANARMEEMGHRVRVGLDRIHSFKEMIIQSDDDNQIDIEHEISELEHMFKCFDSEISKH 300
           NGANARMEEMGHRVRVGLDRIHSFKEMIIQSDDDNQIDIEHEISELEHMFKCFDSEISKH
Sbjct: 241 NGANARMEEMGHRVRVGLDRIHSFKEMIIQSDDDNQIDIEHEISELEHMFKCFDSEISKH 300

Query: 301 VKIKKHERVNTD 313
           VKIKKHERVNTD
Sbjct: 301 VKIKKHERVNTD 312

[Close]

BLAST of Carg25461-RA vs. NCBI nr
Match: XP_022954551.1 (uncharacterized protein LOC111456791 [Cucurbita moschata])

HSP 1 Score: 480.7 bits (1236), Expect = 3.7e-132
Identity = 255/318 (80.19%), Postives = 283/318 (88.99%), Query Frame = 0


Query: 1   MDSAGTTRIRALSSPELVEGSTSPQQPHVDQNFIGVSTNVRILLKLIHEYKEASTKGNNG 60
           M+S   TR+RALS  EL    TSP+Q HVDQNF+GVSTNVR+LLKLIHEYK+AS KGNNG
Sbjct: 1   MESLDVTRVRALSFSELANALTSPRQNHVDQNFVGVSTNVRLLLKLIHEYKDASVKGNNG 60

Query: 61  SRDQRISEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRNVPRDKKPTNEPITDEK 120
           SRDQRISEMMLI+D+VK+QIQ++Q LGK+R A LRRCNTDLRRNVPRDK+ +NEP+ DEK
Sbjct: 61  SRDQRISEMMLIIDDVKTQIQKSQFLGKKRAAELRRCNTDLRRNVPRDKR-SNEPVMDEK 120

Query: 121 EKLRRELNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLM 180
           E+LRRELNAS+AARKSLESICSSIGKEKEIIAKELARTVQQL+GMEEH+NDLKAQNEMLM
Sbjct: 121 ERLRRELNASMAARKSLESICSSIGKEKEIIAKELARTVQQLNGMEEHLNDLKAQNEMLM 180

Query: 181 CKVQACVAEHRGLKNNNLPDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQERR 240
           CKVQACVAEHR +K NN+PDAQ ++EALQKRNK LTEQLLKSLDAYRSLKRK+KEYQE+R
Sbjct: 181 CKVQACVAEHR-VKKNNVPDAQANMEALQKRNKVLTEQLLKSLDAYRSLKRKIKEYQEKR 240

Query: 241 NGANARMEEMGHRVRVGLDRIHSFKEMIIQSDDDNQIDIEHEISELEHMFKCFDSEISKH 300
           +G NARMEEMG RVRVGLDRIHSFKEM  QSDD  QIDIEHEIS LEHMFKCFD EISKH
Sbjct: 241 SGENARMEEMGLRVRVGLDRIHSFKEMFTQSDDKKQIDIEHEISALEHMFKCFDLEISKH 300

Query: 301 VKIK------KHERVNTD 313
           VK+K      KHER+N D
Sbjct: 301 VKMKKYPIECKHERINAD 316

[Close]

BLAST of Carg25461-RA vs. NCBI nr
Match: XP_023542824.1 (uncharacterized protein LOC111802625 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 478.8 bits (1231), Expect = 1.4e-131
Identity = 253/318 (79.56%), Postives = 283/318 (88.99%), Query Frame = 0


Query: 1   MDSAGTTRIRALSSPELVEGSTSPQQPHVDQNFIGVSTNVRILLKLIHEYKEASTKGNNG 60
           M+S   TR+RALS  EL    TSP+Q HVDQNF+GVSTNVR+LLKLIHEYK+AS KGNNG
Sbjct: 1   MESLDVTRVRALSFSELANALTSPRQNHVDQNFVGVSTNVRLLLKLIHEYKDASVKGNNG 60

Query: 61  SRDQRISEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRNVPRDKKPTNEPITDEK 120
           SRDQRISEMMLI+D+VK+QIQ++Q LGK+R A LRRCNTDLRRNVPRDK+ +NEP+ DEK
Sbjct: 61  SRDQRISEMMLIIDDVKTQIQKSQFLGKKRAAELRRCNTDLRRNVPRDKR-SNEPVMDEK 120

Query: 121 EKLRRELNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLM 180
           E+LRRELNAS+AARKSLESICSSIGKEKEIIAKELARTVQQL+GMEEH+NDLKAQNEMLM
Sbjct: 121 ERLRRELNASMAARKSLESICSSIGKEKEIIAKELARTVQQLNGMEEHLNDLKAQNEMLM 180

Query: 181 CKVQACVAEHRGLKNNNLPDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQERR 240
           CKVQACVAEHR +K NN+PDAQ ++EALQKRNK LTEQLLKSLDAYRSLKRK+KEYQE+R
Sbjct: 181 CKVQACVAEHR-VKKNNVPDAQANMEALQKRNKVLTEQLLKSLDAYRSLKRKIKEYQEKR 240

Query: 241 NGANARMEEMGHRVRVGLDRIHSFKEMIIQSDDDNQIDIEHEISELEHMFKCFDSEISKH 300
           +G NARMEEMG RVRVGLDRIHSFKEM  Q+DD+  IDIEHEIS LEHMFKCFD EISKH
Sbjct: 241 SGENARMEEMGLRVRVGLDRIHSFKEMFTQNDDEKHIDIEHEISALEHMFKCFDLEISKH 300

Query: 301 VKIK------KHERVNTD 313
           VK+K      KHER+N D
Sbjct: 301 VKMKKYPVECKHERINAD 316

[Close]

BLAST of Carg25461-RA vs. TAIR10
Match: AT4G03620.1 (myosin heavy chain-related)

HSP 1 Score: 212.6 bits (540), Expect = 3.4e-55
Identity = 133/312 (42.63%), Postives = 194/312 (62.18%), Query Frame = 0


Query: 7   TRIRALSSPELV---EGS-------TSPQQPHVDQNFIGVSTNVRILLKLIHEYKEASTK 66
           +R+RA S+P+LV    GS       T   Q H D    G++TNV++LLKL+ ++ EA+++
Sbjct: 34  SRLRAFSAPDLVPSDSGSITSSPTRTIEHQSHEDSGLEGITTNVKLLLKLVQDHNEATSR 93

Query: 67  GNNGSRDQRISEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRNVPRDKKPTNEPI 126
            ++  + QR++ MM ILD++K++IQ+AQ      +  LRRC TDL+R+    K PT  P 
Sbjct: 94  HHDDWKVQRVNTMMTILDDLKTRIQKAQQQSSSGKKELRRCYTDLKRSPDLTKSPTKPPQ 153

Query: 127 TDEK--EKLRRELNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKA 186
            D +  +KLR+EL+AS+AARKSL+ +CSS+GKEKEI+A EL+R   +L+ MEE V+D +A
Sbjct: 154 NDPEDIQKLRKELSASMAARKSLQMMCSSLGKEKEIMALELSRKAHELNEMEELVSDFRA 213

Query: 187 QNEMLMCKVQACVAEHRGLKNNNL--PDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRK 246
           QNE L+ KVQ C  EH   K  ++  P    +   LQ RNK L+EQLLKS+D YRSLKRK
Sbjct: 214 QNEKLLKKVQNCAVEHNKEKKEDIDGPGPGDNNVPLQGRNKELSEQLLKSIDGYRSLKRK 273

Query: 247 LKEYQERRNGANARMEEMGHRVRVGLDRIHSFKEMIIQSDDDNQIDIEHEISELEHMFKC 305
            K+ Q+        + +    V VG  R+    E I + D   +++IE+EIS LE +F+ 
Sbjct: 274 YKDVQDENGSMRRALRDYAEGVNVGTQRLTKLHEKITRED---EVNIENEISNLEKLFQG 333

[Close]

BLAST of Carg25461-RA vs. TrEMBL
Match: tr|A0A1S3BAN5|A0A1S3BAN5_CUCME (outer dense fiber protein 2 OS=Cucumis melo OX=3656 GN=LOC103488021 PE=4 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 2.7e-131
Identity = 260/320 (81.25%), Postives = 285/320 (89.06%), Query Frame = 0


Query: 1   MDSAGTTRIRALSSPELVEGSTSPQQPHVDQNFIGVSTNVRILLKLIHEYKEASTKGNNG 60
           M+S    R+RALSSPEL    TSP+Q HVDQNF+GVSTNVRILLKLIHEYKEAS KGN+G
Sbjct: 1   MESIDINRVRALSSPELANPLTSPRQHHVDQNFVGVSTNVRILLKLIHEYKEASVKGNDG 60

Query: 61  SRDQRISEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRNVPRDKKPTNEP-ITDE 120
           S++QRISEMM I+DEVKSQI ++Q LGKR+EA LRRCNTDLRRNVP+DKK TNEP ITDE
Sbjct: 61  SKNQRISEMMQIIDEVKSQILKSQSLGKRKEAALRRCNTDLRRNVPKDKK-TNEPIITDE 120

Query: 121 KEKLRRELNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML 180
           KE+LRRELNAS+AARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML
Sbjct: 121 KERLRRELNASVAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML 180

Query: 181 MCKVQACVAEHRGLKNNNLPDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQER 240
           MCKVQACVAEHR +K NN+PDAQG+IEALQKRNK LTEQLLKSLDAYRSLKRKLKEYQE+
Sbjct: 181 MCKVQACVAEHR-VKKNNVPDAQGNIEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQEK 240

Query: 241 RNGANARMEEMGHRVRVGLDRIHSFKEMII-QSDDDNQIDIEHEISELEHMFKCFDSEIS 300
           RNG NARMEEMG +VR GL+RIHSFKEM+I Q+DD+ QIDIE EIS LEHMFKCFD EIS
Sbjct: 241 RNGTNARMEEMGIQVRAGLNRIHSFKEMMITQTDDEKQIDIEQEISALEHMFKCFDFEIS 300

Query: 301 KHVKIK------KHERVNTD 313
           K VKIK      KH+R+N D
Sbjct: 301 KQVKIKKHPLECKHDRINAD 318

[Close]

BLAST of Carg25461-RA vs. TrEMBL
Match: tr|A0A0A0LVR7|A0A0A0LVR7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G537380 PE=4 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 1.5e-129
Identity = 256/317 (80.76%), Postives = 283/317 (89.27%), Query Frame = 0


Query: 1   MDSAGTTRIRALSSPELVEGS-TSPQQPHVDQNFIGVSTNVRILLKLIHEYKEASTKGNN 60
           M+S    R+RALSSPEL   +  SP+Q H+DQNF+GVSTNVR+LLKLIHEYKE S KGN+
Sbjct: 1   MESIDINRVRALSSPELANTTLISPRQHHIDQNFVGVSTNVRLLLKLIHEYKEVSMKGND 60

Query: 61  GSRDQRISEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRNVPRDKKPTNEP-ITD 120
           GS+DQRISEMMLI+DEVKSQIQ+++ LGKRREA LRRCNTDLRRNVP+DKK TNEP I D
Sbjct: 61  GSKDQRISEMMLIIDEVKSQIQKSRSLGKRREAELRRCNTDLRRNVPKDKK-TNEPIIID 120

Query: 121 EKEKLRRELNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEM 180
           EKE+LRRELNAS+A+RKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEM
Sbjct: 121 EKERLRRELNASVASRKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEM 180

Query: 181 LMCKVQACVAEHRGLKNNNLPDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQE 240
           LMCKVQACVAEHR +K NN+PDAQG+ EALQKRNK LTEQLLKSLDAYRSLKRKLKEYQE
Sbjct: 181 LMCKVQACVAEHR-VKKNNVPDAQGNFEALQKRNKVLTEQLLKSLDAYRSLKRKLKEYQE 240

Query: 241 RRNGANARMEEMGHRVRVGLDRIHSFKEMII-QSDDDNQIDIEHEISELEHMFKCFDSEI 300
           RRNG NARMEEMG +VR GL+RIHSFKEM+I Q+DDD QIDIE EIS LEHMFKCFD EI
Sbjct: 241 RRNGTNARMEEMGIQVRAGLERIHSFKEMMITQTDDDKQIDIESEISALEHMFKCFDFEI 300

Query: 301 SKHVKIKKH--ERVNTD 313
           SK  K+KKH  +R+N D
Sbjct: 301 SKQTKVKKHPVDRINAD 315

[Close]

BLAST of Carg25461-RA vs. TrEMBL
Match: tr|M5WHV6|M5WHV6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G087600 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 8.9e-82
Identity = 172/296 (58.11%), Postives = 229/296 (77.36%), Query Frame = 0


Query: 8   RIRALSSP---ELVEGSTSPQQPHVDQNFIGVSTNVRILLKLIHEYKEASTKGNNGSRDQ 67
           RIRA SSP    L   ST+P++   D +F G++TNV++LLKLIH++ EA TK N+  + Q
Sbjct: 3   RIRAFSSPAVLPLPASSTTPKERPEDHSFDGIATNVKLLLKLIHDHNEACTKENDDRKTQ 62

Query: 68  RISEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRNVPRDKKPTNEPITDEKEKLR 127
           R++ M+ I+D+VK++IQ++Q +G+R E  LRRCNTDLR NVPRDK+PT EPI DEKE+LR
Sbjct: 63  RVAGMITIIDDVKTRIQKSQSIGRRAE--LRRCNTDLRPNVPRDKRPT-EPIIDEKERLR 122

Query: 128 RELNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLMCKVQ 187
           ++L+AS+AARKSLE +CSS+GKEKEIIA ELAR VQ+  GMEEH+NDL+AQNE L+ KVQ
Sbjct: 123 KQLSASLAARKSLEIMCSSLGKEKEIIASELARKVQEFSGMEEHINDLRAQNEKLLAKVQ 182

Query: 188 ACVAEHRGLKNNNLPDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQERRNGAN 247
           AC AEH+  K   + + QG++ ALQ+RNKAL+EQLLKSLD  RSLKRK+K+ Q+  NG +
Sbjct: 183 ACAAEHKEKKCGGV-EIQGNV-ALQERNKALSEQLLKSLDGCRSLKRKIKDAQKENNGMH 242

Query: 248 ARMEEMGHRVRVGLDRIHSFKEMIIQSDDDNQIDIEHEISELEHMFKCFDSEISKH 301
           + MEEMG  V+ GLDRI + +E I  SD++   D+E EIS LE +F+CF + +SKH
Sbjct: 243 SAMEEMGVEVQEGLDRIRALREKITTSDNEQATDVEEEISALERLFECFSTRVSKH 293

[Close]

BLAST of Carg25461-RA vs. TrEMBL
Match: tr|A0A2N9GAY8|A0A2N9GAY8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24450 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 6.4e-72
Identity = 163/294 (55.44%), Postives = 216/294 (73.47%), Query Frame = 0


Query: 7   TRIRALSSPELVEGSTSPQQPHVDQNFIGVSTNVRILLKLIHEYKEASTKGNNGSRDQRI 66
           ++ RA SSPEL   S +  +   D    GV+TNV++LLKLI ++ EA TK N+  + QR+
Sbjct: 2   SKARAFSSPELAPPSINHHEMPEDYCLEGVATNVKLLLKLIQDHNEACTKDNDNRKLQRV 61

Query: 67  SEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRNVPRDKKPTNEPITDEKEKLRRE 126
           + M+ I+D+VK+++++ Q  GK+RE  LRRCNTDLR NVPRDKK + +PITDEKE+LRRE
Sbjct: 62  AGMIAIIDDVKTRVEKFQSSGKKRE--LRRCNTDLRPNVPRDKK-SPDPITDEKERLRRE 121

Query: 127 LNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEMLMCKVQAC 186
           LN+S+AA+KSLE +CSS+GKEKEIIA ELAR VQ+  GMEE +NDLK QNEML+ KVQA 
Sbjct: 122 LNSSLAAQKSLEVMCSSLGKEKEIIASELARKVQEFDGMEELINDLKVQNEMLLGKVQAY 181

Query: 187 VAEHRGLKNNNLPDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQERRNGANAR 246
             EHRG K     + QG++  LQ+RNKAL+E+LL+SLD YRSLKR+ ++ +E        
Sbjct: 182 AEEHRGKKCGG-GEGQGNV-TLQERNKALSEKLLRSLDGYRSLKRRFRDAKEENIAIFET 241

Query: 247 MEEMGHRVRVGLDRIHSFKEMIIQSDDDNQIDIEHEISELEHMFKCFDSEISKH 301
           MEEMG  V+ GLDRI SFK+  + S ++  +D E EIS +EHMF+ FD +ISKH
Sbjct: 242 MEEMGMEVQAGLDRICSFKQR-MASGNEQPVDFEEEISAIEHMFEGFDMKISKH 289

[Close]

BLAST of Carg25461-RA vs. TrEMBL
Match: tr|A0A1Q3C8H9|A0A1Q3C8H9_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_19886 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.9e-71
Identity = 166/312 (53.21%), Postives = 224/312 (71.79%), Query Frame = 0


Query: 7   TRIRALSSPELVEGSTSPQQPH------VDQNFIGVSTNVRILLKLIHEYKEASTKGNNG 66
           +RIRA S+PELV  ST+P+  H       D +F G++TNV++LLKLI ++++A+ K N+ 
Sbjct: 5   SRIRAFSNPELVP-STTPKASHGADQWTEDYSFEGMATNVKLLLKLIQDHQDANLKYNDD 64

Query: 67  SRDQRISEMMLILDEVKSQIQRAQVLGKRREAGLRRCNTDLRRN-VPRDKKPTNEPITDE 126
            R QR++ MM ILD+VKS+IQ++Q  GK+R A LRRC TDLR N VPR+KKP NEPITDE
Sbjct: 65  RRTQRVAGMMTILDDVKSRIQKSQSSGKKRMAELRRCYTDLRANPVPREKKP-NEPITDE 124

Query: 127 KEKLRRELNASIAARKSLESICSSIGKEKEIIAKELARTVQQLHGMEEHVNDLKAQNEML 186
           KE LR+ELN S+AARKSLE +CSS+GKEKEI+A ELAR V +++ MEE +NDL+ QNE L
Sbjct: 125 KEILRKELNGSLAARKSLEMMCSSLGKEKEIMASELARKVHEVNEMEELINDLRVQNETL 184

Query: 187 MCKVQACVAEHRGLKNNNLPDAQGSIEALQKRNKALTEQLLKSLDAYRSLKRKLKEYQER 246
           + KV+AC  EH+  K     +AQG   ALQ RNKAL+EQLLKSLD YRSLKRK KE ++ 
Sbjct: 185 LAKVKACATEHKDKKCGG-GEAQGK-AALQDRNKALSEQLLKSLDGYRSLKRKYKEAKDE 244

Query: 247 RNGANARMEEMGHRVRVGLDRIHSFKEMIIQS---DDDNQIDIEHEISELEHMFKCFDSE 306
               +A +EEMG  V  GLD++  F++ +  +    +     +E EI+ LEH+F+CFD+ 
Sbjct: 245 NMMIHATLEEMGVDVTAGLDQVRGFRQRMATATTMTEKKSAGMEQEITTLEHIFQCFDTR 304

Query: 307 ISKHVKIKKHER 309
           ISKH +  ++ +
Sbjct: 305 ISKHCQKSEYAK 312

The following BLAST results are available for this feature:

BLAST of Carg25461-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023519118.1	2.2e-164	98.72	uncharacterized protein LOC111782578 [Cucurbita pepo subsp. pepo]	[more]
XP_022927627.1	1.1e-163	98.40	uncharacterized protein LOC111434395 [Cucurbita moschata]	[more]
XP_023001447.1	3.1e-163	97.44	uncharacterized protein LOC111495578 [Cucurbita maxima]	[more]
XP_022954551.1	3.7e-132	80.19	uncharacterized protein LOC111456791 [Cucurbita moschata]	[more]
XP_023542824.1	1.4e-131	79.56	uncharacterized protein LOC111802625 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg25461-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT4G03620.1	3.4e-55	42.63	myosin heavy chain-related	[more]

BLAST of Carg25461-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg25461-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BAN5\|A0A1S3BAN5_CUCME	2.7e-131	81.25	outer dense fiber protein 2 OS=Cucumis melo OX=3656 GN=LOC103488021 PE=4 SV=1	[more]
tr\|A0A0A0LVR7\|A0A0A0LVR7_CUCSA	1.5e-129	80.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G537380 PE=4 SV=1	[more]
tr\|M5WHV6\|M5WHV6_PRUPE	8.9e-82	58.11	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G087600 PE=4 SV=1	[more]
tr\|A0A2N9GAY8\|A0A2N9GAY8_FAGSY	6.4e-72	55.44	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24450 PE=4 SV=1	[more]
tr\|A0A1Q3C8H9\|A0A1Q3C8H9_CEPFO	1.9e-71	53.21	Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_19886 PE=4...	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg25461	Carg25461	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg25461-RA.CDS.2	Carg25461-RA.CDS.2	CDS
Carg25461-RA.CDS.1	Carg25461-RA.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg25461-RA.exon.2	Carg25461-RA.exon.2	exon
Carg25461-RA.exon.1	Carg25461-RA.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg25461-RA	Carg25461-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 198..253
None	No IPR available	COILS	Coil	Coil	coord: 155..175
None	No IPR available	COILS	Coil	Coil	coord: 120..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR38378	FAMILY NOT NAMED	coord: 7..304