Carg09326 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAACGTGATCAGGCCATTAAAACCGAACCGCCGCCGCATCAACTTCAGGCAAAAGGTAAGCTTTCCGGTTAATTAGAGTTCATTTTGTTTTTTTTTGGCGTTAAGGGTTGGGACTAAATTTGGAGGGGAATAAAAAGAAGCAGGATGAGCAGGCCGGGGGATTGGAATTGTAGGTCTTGCCACCATCTCAACTTCCAACGACGGGAGTCCTGTCAGCGTTGTGGTGAGCCTAGGGCCGACTTCAGCGGCGGAAGAGTTGGTTCCTCGTCCTTTGGTTTCACTACCGGCCCCGACGTCCGTCCTGGGGATTGGTACTGCGCCGTCGCCAACTGCGGCGCTCATAACTTCGCTAGCCGCTCTATCTGCTTCAAGTGCGGCGCTTCTAAAGATGACGCTTCCCCTGCCGCCGCCGCCGCCGCCGCCGCTTACGACGGCGATTTTACTAGAATGAGAGGCTTTAACTTCGGCGCTGCCTCCAACCGCCCTGGATGGAAATCTGGTGATTGGATCTGTTCCAGGTAGGGTTTCCAATTTTTCTCTAAATTCCATTTTCATCCCCACCACTTTCAATATTTTCAAATTTAGTCCATTTTTAATTATGATTTTAATTTTTTCATCCCATATCTACTAAATTAATCTATAAAAAAAAAGTCAAAAATTAATGTTACAGATCAAATTGCAACGAGCATAACTTTGCCAACAGAAGAGAATGCTTCAGATGTAATGCACCTAGAGATTCAAACAACACGTCTCCATACTCGTACTCGTAGAGGTAATTAATTAATTTCTAGAAACAAAATATCATATTTATAAATGGATCCCTAAACTCTTTCTCGGGTTTAATTAGTTATTAATATTATTATTTTGGGAATATTTTGCAATTTACAGGTGGTAGCAATGGAAGGATCAAATTCTAGCTAGAAAGAAGAGAGTTTCCAATCAGAACGTCGTCGTTTTGTTTTCTTTATTTTCCAGTTTCAAAAGTGATTTAAGGGTGGATTTATGCATGCATGCAGGAAAATACTTCGTATCCAATTTTCTAATTTATATTATATTAATCCGTAACTTTCACTTTATGTTATGTGCTTACCTCGAATTAATTTTCTAATAATAAATC AAACGTGATCAGGCCATTAAAACCGAACCGCCGCCGCATCAACTTCAGGCAAAAGGATGAGCAGGCCGGGGGATTGGAATTGTAGGTCTTGCCACCATCTCAACTTCCAACGACGGGAGTCCTGTCAGCGTTGTGGTGAGCCTAGGGCCGACTTCAGCGGCGGAAGAGTTGGTTCCTCGTCCTTTGGTTTCACTACCGGCCCCGACGTCCGTCCTGGGGATTGGTACTGCGCCGTCGCCAACTGCGGCGCTCATAACTTCGCTAGCCGCTCTATCTGCTTCAAGTGCGGCGCTTCTAAAGATGACGCTTCCCCTGCCGCCGCCGCCGCCGCCGCCGCTTACGACGGCGATTTTACTAGAATGAGAGGCTTTAACTTCGGCGCTGCCTCCAACCGCCCTGGATGGAAATCTGGTGATTGGATCTGTTCCAGATCAAATTGCAACGAGCATAACTTTGCCAACAGAAGAGAATGCTTCAGATGTAATGCACCTAGAGATTCAAACAACACGTCTCCATACTCGTACTCGTAGAGGTGGTAGCAATGGAAGGATCAAATTCTAGCTAGAAAGAAGAGAGTTTCCAATCAGAACGTCGTCGTTTTGTTTTCTTTATTTTCCAGTTTCAAAAGTGATTTAAGGGTGGATTTATGCATGCATGCAGGAAAATACTTCGTATCCAATTTTCTAATTTATATTATATTAATCCGTAACTTTCACTTTATGTTATGTGCTTACCTCGAATTAATTTTCTAATAATAAATC ATGAGCAGGCCGGGGGATTGGAATTGTAGGTCTTGCCACCATCTCAACTTCCAACGACGGGAGTCCTGTCAGCGTTGTGGTGAGCCTAGGGCCGACTTCAGCGGCGGAAGAGTTGGTTCCTCGTCCTTTGGTTTCACTACCGGCCCCGACGTCCGTCCTGGGGATTGGTACTGCGCCGTCGCCAACTGCGGCGCTCATAACTTCGCTAGCCGCTCTATCTGCTTCAAGTGCGGCGCTTCTAAAGATGACGCTTCCCCTGCCGCCGCCGCCGCCGCCGCCGCTTACGACGGCGATTTTACTAGAATGAGAGGCTTTAACTTCGGCGCTGCCTCCAACCGCCCTGGATGGAAATCTGGTGATTGGATCTGTTCCAGATCAAATTGCAACGAGCATAACTTTGCCAACAGAAGAGAATGCTTCAGATGTAATGCACCTAGAGATTCAAACAACACGTCTCCATACTCGTACTCGTAG MSRPGDWNCRSCHHLNFQRRESCQRCGEPRADFSGGRVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGASKDDASPAAAAAAAAYDGDFTRMRGFNFGAASNRPGWKSGDWICSRSNCNEHNFANRRECFRCNAPRDSNNTSPYSYS
BLAST of Carg09326 vs. NCBI nr
Match: XP_022962203.1 (uncharacterized RNA-binding protein C17H9.04c-like isoform X1 [Cucurbita moschata] >XP_022962204.1 uncharacterized RNA-binding protein C17H9.04c-like isoform X1 [Cucurbita moschata] >XP_022962206.1 uncharacterized RNA-binding protein C17H9.04c-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 328.9 bits (842), Expect = 9.1e-87 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
BLAST of Carg09326 vs. NCBI nr
Match: XP_023547066.1 (zinc finger Ran-binding domain-containing protein 2-like [Cucurbita pepo subsp. pepo] >XP_023547067.1 zinc finger Ran-binding domain-containing protein 2-like [Cucurbita pepo subsp. pepo] >XP_023547068.1 zinc finger Ran-binding domain-containing protein 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 324.7 bits (831), Expect = 1.7e-85 Identity = 149/157 (94.90%), Postives = 149/157 (94.90%), Query Frame = 0
BLAST of Carg09326 vs. NCBI nr
Match: XP_022996813.1 (zinc finger Ran-binding domain-containing protein 2-like [Cucurbita maxima] >XP_022996814.1 zinc finger Ran-binding domain-containing protein 2-like [Cucurbita maxima] >XP_022996815.1 zinc finger Ran-binding domain-containing protein 2-like [Cucurbita maxima]) HSP 1 Score: 317.8 bits (813), Expect = 2.1e-83 Identity = 146/157 (92.99%), Postives = 148/157 (94.27%), Query Frame = 0
BLAST of Carg09326 vs. NCBI nr
Match: XP_022131903.1 (uncharacterized RNA-binding protein C17H9.04c-like [Momordica charantia] >XP_022131904.1 uncharacterized RNA-binding protein C17H9.04c-like [Momordica charantia]) HSP 1 Score: 284.3 bits (726), Expect = 2.6e-73 Identity = 131/161 (81.37%), Postives = 137/161 (85.09%), Query Frame = 0
BLAST of Carg09326 vs. NCBI nr
Match: XP_023538151.1 (uncharacterized RNA-binding protein C17H9.04c-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 282.3 bits (721), Expect = 9.8e-73 Identity = 130/160 (81.25%), Postives = 140/160 (87.50%), Query Frame = 0
BLAST of Carg09326 vs. TAIR10
Match: AT5G25490.1 (Ran BP2/NZF zinc finger-like superfamily protein) HSP 1 Score: 197.2 bits (500), Expect = 7.5e-51 Identity = 99/170 (58.24%), Postives = 113/170 (66.47%), Query Frame = 0
BLAST of Carg09326 vs. TAIR10
Match: AT3G15680.1 (Ran BP2/NZF zinc finger-like superfamily protein) HSP 1 Score: 196.4 bits (498), Expect = 1.3e-50 Identity = 106/167 (63.47%), Postives = 114/167 (68.26%), Query Frame = 0
BLAST of Carg09326 vs. TAIR10
Match: AT2G26695.1 (Ran BP2/NZF zinc finger-like superfamily protein) HSP 1 Score: 130.2 bits (326), Expect = 1.1e-30 Identity = 62/143 (43.36%), Postives = 85/143 (59.44%), Query Frame = 0
BLAST of Carg09326 vs. TAIR10
Match: AT2G17975.1 (zinc finger (Ran-binding) family protein) HSP 1 Score: 51.2 bits (121), Expect = 6.7e-07 Identity = 39/135 (28.89%), Postives = 51/135 (37.78%), Query Frame = 0
BLAST of Carg09326 vs. Swiss-Prot
Match: sp|O13801|YE04_SCHPO (Uncharacterized RNA-binding protein C17H9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC17H9.04c PE=1 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 6.6e-12 Identity = 65/256 (25.39%), Postives = 75/256 (29.30%), Query Frame = 0
BLAST of Carg09326 vs. Swiss-Prot
Match: sp|Q5ZLX5|ZRAB2_CHICK (Zinc finger Ran-binding domain-containing protein 2 OS=Gallus gallus OX=9031 GN=ZRANB2 PE=2 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 6.0e-05 Identity = 31/84 (36.90%), Postives = 38/84 (45.24%), Query Frame = 0
BLAST of Carg09326 vs. Swiss-Prot
Match: sp|O95218|ZRAB2_HUMAN (Zinc finger Ran-binding domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ZRANB2 PE=1 SV=2) HSP 1 Score: 46.6 bits (109), Expect = 3.0e-04 Identity = 30/84 (35.71%), Postives = 37/84 (44.05%), Query Frame = 0
BLAST of Carg09326 vs. Swiss-Prot
Match: sp|Q9R020|ZRAB2_MOUSE (Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=Zranb2 PE=1 SV=2) HSP 1 Score: 46.6 bits (109), Expect = 3.0e-04 Identity = 30/84 (35.71%), Postives = 37/84 (44.05%), Query Frame = 0
BLAST of Carg09326 vs. Swiss-Prot
Match: sp|Q19QU3|ZRAB2_PIG (Zinc finger Ran-binding domain-containing protein 2 OS=Sus scrofa OX=9823 GN=ZRANB2 PE=2 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 3.0e-04 Identity = 30/84 (35.71%), Postives = 37/84 (44.05%), Query Frame = 0
BLAST of Carg09326 vs. TrEMBL
Match: tr|A0A1S3BBL4|A0A1S3BBL4_CUCME (uncharacterized RNA-binding protein C17H9.04c OS=Cucumis melo OX=3656 GN=LOC103488288 PE=4 SV=1) HSP 1 Score: 274.2 bits (700), Expect = 1.8e-70 Identity = 126/161 (78.26%), Postives = 135/161 (83.85%), Query Frame = 0
BLAST of Carg09326 vs. TrEMBL
Match: tr|A0A0A0LLW7|A0A0A0LLW7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G380050 PE=4 SV=1) HSP 1 Score: 274.2 bits (700), Expect = 1.8e-70 Identity = 126/161 (78.26%), Postives = 135/161 (83.85%), Query Frame = 0
BLAST of Carg09326 vs. TrEMBL
Match: tr|A0A1S3U123|A0A1S3U123_VIGRR (transcription initiation factor TFIID subunit 15-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106760812 PE=4 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 1.1e-61 Identity = 116/158 (73.42%), Postives = 128/158 (81.01%), Query Frame = 0
BLAST of Carg09326 vs. TrEMBL
Match: tr|A0A0L9UHF7|A0A0L9UHF7_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan04g216200 PE=4 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 1.1e-61 Identity = 116/158 (73.42%), Postives = 127/158 (80.38%), Query Frame = 0
BLAST of Carg09326 vs. TrEMBL
Match: tr|A0A0S3RC49|A0A0S3RC49_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G083200 PE=4 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 1.1e-61 Identity = 116/158 (73.42%), Postives = 127/158 (80.38%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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