Carg09261 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGCAGAAGAATCCTGAAGAAAAGAGCATAATCGCCTCTAATGGCGCAGGCTGTTCAGAAAAATACTCTGTACGTTGGTGGTTTGGCGGAGGAGGTGAACGAGTCTATTCTACATGCAGCCTTCATTCCCTTTGGCGACATCAAAGATGTAAAGACTCCATTGGATCAAGCCACTCAGAAGCACCGTTCCTTCGGCTTCGTCACTTTCTTGGAGAAGGAAGACGCATCCGCCGCCATGGATAATATGGACGGTGCTGAGCTCTACGGCCGTGTCCTCACTGTCAACTATGCCCTCCCCGAGCGTATCAAGGGTGGTGAACAAGGATGGGCTGCCCAACCTAGTAAGTTCCCCTTTTCCTTAAACCCTAATTATTTTCATCTATTGTTTCTCTGCATTTGTGAAATTCCGCTTGTGTTACATCTCATTGTTGATTGATAACTTCTTGGCTGTGCTCGATTACCTGTTTTGCTCTAATTTCATGCTATGATAGGAGTCCTTGAAAATAGAAATAGAATTTATGCAATCTATTTGGTTGCATTGCATACAATAGTGGTTCGTTGGTTATATTCTAAATCTTCAATTTCATTCTTACAATTTCAAATGTTTTGTTAGTGCAATAAAAAGTTTCAGTCTAGCCGATTTCTAATTTGATTTCAAATCAAATATATGTATCTGAAACTGATTTATATGCAAAATTCTGTGAAGGAACCAAAGCTAACAATTTAAAAAGTAAACTAAAATTTGGTTCATGTGGAAGTTCTGGACCAAAATTAGATTTAAACAGCTTATCATTTTCTGGTGCCGAAGTTTAATCCTTAGGACAAGTTTTGGAAATTGTTTTAAGATTTGGACTCGGCCATTTTAGGATTTATTTAGATTATGTTTGTGTATCTAAATCTCCTGCCTTGGTTGCTAATTACAAGTATTGCAATCTATGGCATTAGCATGCTGATAGTTTCCTCCATTCCTGCCAATATGAACCTAGCTTAGTAGTTAAAGCATCTACGAAGTTTGAGGTTCAAATTCTCGCAGCGTGTCGTATAAAACAAAAATATGTTCCATCTCCTTGACTGTTCTTTGATTTCTATTTCCCCTCAATGTTCTTGTGGGCTCCTGTATCATCACTACTTGTTCTGCATCTTTTGTGAGCTTAGAATTGAGTGATTAAAGCTTTACTGCACGTCTACTACCGAGTGGCTGGCACTGTCTGATTGCCTCTATTCCTTCGATTTCAGAACGTATCTTGGCACTTGTGTGTTATTGACTGGTGTAGAGGCCTACTAACTTGAAGTTAGCAGCCTCGTTCAGTTCCCATGGATAGTTGTATACTTTGTCTTTCATCATTCCCTTTCCATTTCACTGGACGTTTTTGTATGATTGAAATGTATTGCATTGCTATAGTGATCTTGCAAATGGGTCTGAGTGAGTGATTTTCCCCCTCTTCTTGTCCTAATTGTTACTAAACAAACACCTTCCTTTAAATTATAGTCTGGGCGGATGCGGATACGTGGTTTGAAAGGCAGCAACAAGAGGAGGAAATGCAGCGGATTCAGGCGGAGAATCGAGCAACTATGCAAGCTGCTGAGGAGCTGCACAGGAAGAAAGTAGCCCAAGAGCGGGAAGGGGAGAAAGAAGACGAGGTAGACACGAAGGACGATCCCATGGCTAAGGCTGAAGCCGAGGCATTAAGACAGAACAGTTAAAAGAGACGAAGTTTAGTGAGATTTGTACTTGCTTCAATGCAAGTGAAAGAGAGAGATAGAGAGGCAGAACATGGAAAACCTGCCGTTCTCTGAGCTTGCTATTGCTATTCACAATGCTGATGCATGTTAAGCTTCCGCATTGTTTTGTTTCTGTAGTTAATTCTATTCACAAAGCATAGTTTGAAAAGCTGAACAACGCTTACCTCTGCTGAAAACTTGTAATTTTATTGAAAGAAGAGCTAGAAATCAGGAGTTTTTAATGCGAC AAGCAGAAGAATCCTGAAGAAAAGAGCATAATCGCCTCTAATGGCGCAGGCTGTTCAGAAAAATACTCTGTACGTTGGTGGTTTGGCGGAGGAGGTGAACGAGTCTATTCTACATGCAGCCTTCATTCCCTTTGGCGACATCAAAGATGTAAAGACTCCATTGGATCAAGCCACTCAGAAGCACCGTTCCTTCGGCTTCGTCACTTTCTTGGAGAAGGAAGACGCATCCGCCGCCATGGATAATATGGACGGTGCTGAGCTCTACGGCCGTGTCCTCACTGTCAACTATGCCCTCCCCGAGCGTATCAAGGGTGGTGAACAAGGATGGGCTGCCCAACCTATCTGGGCGGATGCGGATACGTGGTTTGAAAGGCAGCAACAAGAGGAGGAAATGCAGCGGATTCAGGCGGAGAATCGAGCAACTATGCAAGCTGCTGAGGAGCTGCACAGGAAGAAAGTAGCCCAAGAGCGGGAAGGGGAGAAAGAAGACGAGGTAGACACGAAGGACGATCCCATGGCTAAGGCTGAAGCCGAGGCATTAAGACAGAACAGTTAAAAGAGACGAAGTTTAGTGAGATTTGTACTTGCTTCAATGCAAGTGAAAGAGAGAGATAGAGAGGCAGAACATGGAAAACCTGCCGTTCTCTGAGCTTGCTATTGCTATTCACAATGCTGATGCATGTTAAGCTTCCGCATTGTTTTGTTTCTGTAGTTAATTCTATTCACAAAGCATAGTTTGAAAAGCTGAACAACGCTTACCTCTGCTGAAAACTTGTAATTTTATTGAAAGAAGAGCTAGAAATCAGGAGTTTTTAATGCGAC ATGGCGCAGGCTGTTCAGAAAAATACTCTGTACGTTGGTGGTTTGGCGGAGGAGGTGAACGAGTCTATTCTACATGCAGCCTTCATTCCCTTTGGCGACATCAAAGATGTAAAGACTCCATTGGATCAAGCCACTCAGAAGCACCGTTCCTTCGGCTTCGTCACTTTCTTGGAGAAGGAAGACGCATCCGCCGCCATGGATAATATGGACGGTGCTGAGCTCTACGGCCGTGTCCTCACTGTCAACTATGCCCTCCCCGAGCGTATCAAGGGTGGTGAACAAGGATGGGCTGCCCAACCTATCTGGGCGGATGCGGATACGTGGTTTGAAAGGCAGCAACAAGAGGAGGAAATGCAGCGGATTCAGGCGGAGAATCGAGCAACTATGCAAGCTGCTGAGGAGCTGCACAGGAAGAAAGTAGCCCAAGAGCGGGAAGGGGAGAAAGAAGACGAGGTAGACACGAAGGACGATCCCATGGCTAAGGCTGAAGCCGAGGCATTAAGACAGAACAGTTAA MAQAVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRIQAENRATMQAAEELHRKKVAQEREGEKEDEVDTKDDPMAKAEAEALRQNS
BLAST of Carg09261 vs. NCBI nr
Match: XP_022961878.1 (peptidyl-prolyl cis-trans isomerase E [Cucurbita moschata] >XP_022997282.1 peptidyl-prolyl cis-trans isomerase E [Cucurbita maxima] >XP_023545633.1 peptidyl-prolyl cis-trans isomerase E [Cucurbita pepo subsp. pepo]) HSP 1 Score: 332.0 bits (850), Expect = 1.2e-87 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0
BLAST of Carg09261 vs. NCBI nr
Match: XP_022132314.1 (peptidyl-prolyl cis-trans isomerase E [Momordica charantia] >XP_022132315.1 peptidyl-prolyl cis-trans isomerase E [Momordica charantia]) HSP 1 Score: 323.6 bits (828), Expect = 4.2e-85 Identity = 165/169 (97.63%), Postives = 167/169 (98.82%), Query Frame = 0
BLAST of Carg09261 vs. NCBI nr
Match: XP_008445441.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase E [Cucumis melo]) HSP 1 Score: 320.5 bits (820), Expect = 3.5e-84 Identity = 163/171 (95.32%), Postives = 168/171 (98.25%), Query Frame = 0
BLAST of Carg09261 vs. NCBI nr
Match: XP_004144165.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase E [Cucumis sativus] >KGN47657.1 hypothetical protein Csa_6G366550 [Cucumis sativus]) HSP 1 Score: 319.3 bits (817), Expect = 7.9e-84 Identity = 163/171 (95.32%), Postives = 168/171 (98.25%), Query Frame = 0
BLAST of Carg09261 vs. NCBI nr
Match: OMP01129.1 (hypothetical protein COLO4_12139 [Corchorus olitorius]) HSP 1 Score: 308.9 bits (790), Expect = 1.1e-80 Identity = 155/169 (91.72%), Postives = 165/169 (97.63%), Query Frame = 0
BLAST of Carg09261 vs. TAIR10
Match: AT1G13690.1 (ATPase E1) HSP 1 Score: 282.7 bits (722), Expect = 1.5e-76 Identity = 138/165 (83.64%), Postives = 158/165 (95.76%), Query Frame = 0
BLAST of Carg09261 vs. TAIR10
Match: AT5G61030.1 (glycine-rich RNA-binding protein 3) HSP 1 Score: 77.8 bits (190), Expect = 7.2e-15 Identity = 34/82 (41.46%), Postives = 54/82 (65.85%), Query Frame = 0
BLAST of Carg09261 vs. TAIR10
Match: AT3G08000.1 (RNA-binding (RRM/RBD/RNP motifs) family protein) HSP 1 Score: 76.6 bits (187), Expect = 1.6e-14 Identity = 38/91 (41.76%), Postives = 58/91 (63.74%), Query Frame = 0
BLAST of Carg09261 vs. TAIR10
Match: AT4G13850.1 (glycine-rich RNA-binding protein 2) HSP 1 Score: 67.4 bits (163), Expect = 9.8e-12 Identity = 33/75 (44.00%), Postives = 48/75 (64.00%), Query Frame = 0
BLAST of Carg09261 vs. TAIR10
Match: AT1G74230.1 (glycine-rich RNA-binding protein 5) HSP 1 Score: 66.6 bits (161), Expect = 1.7e-11 Identity = 32/82 (39.02%), Postives = 51/82 (62.20%), Query Frame = 0
BLAST of Carg09261 vs. Swiss-Prot
Match: sp|A4FV72|PPIE_BOVIN (Peptidyl-prolyl cis-trans isomerase E OS=Bos taurus OX=9913 GN=PPIE PE=2 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 5.5e-28 Identity = 60/108 (55.56%), Postives = 79/108 (73.15%), Query Frame = 0
BLAST of Carg09261 vs. Swiss-Prot
Match: sp|Q9QZH3|PPIE_MOUSE (Peptidyl-prolyl cis-trans isomerase E OS=Mus musculus OX=10090 GN=Ppie PE=1 SV=2) HSP 1 Score: 125.6 bits (314), Expect = 5.5e-28 Identity = 60/108 (55.56%), Postives = 79/108 (73.15%), Query Frame = 0
BLAST of Carg09261 vs. Swiss-Prot
Match: sp|Q5R723|PPIE_PONAB (Peptidyl-prolyl cis-trans isomerase E OS=Pongo abelii OX=9601 GN=PPIE PE=2 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 7.9e-27 Identity = 67/139 (48.20%), Postives = 91/139 (65.47%), Query Frame = 0
BLAST of Carg09261 vs. Swiss-Prot
Match: sp|Q9UNP9|PPIE_HUMAN (Peptidyl-prolyl cis-trans isomerase E OS=Homo sapiens OX=9606 GN=PPIE PE=1 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 3.0e-26 Identity = 68/139 (48.92%), Postives = 91/139 (65.47%), Query Frame = 0
BLAST of Carg09261 vs. Swiss-Prot
Match: sp|Q9V3G3|PPIE_DROME (Peptidyl-prolyl cis-trans isomerase E OS=Drosophila melanogaster OX=7227 GN=cyp33 PE=1 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 5.3e-23 Identity = 62/141 (43.97%), Postives = 87/141 (61.70%), Query Frame = 0
BLAST of Carg09261 vs. TrEMBL
Match: tr|A0A1S3BCQ8|A0A1S3BCQ8_CUCME (peptidyl-prolyl cis-trans isomerase E OS=Cucumis melo OX=3656 GN=LOC103488462 PE=4 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 2.3e-84 Identity = 163/171 (95.32%), Postives = 168/171 (98.25%), Query Frame = 0
BLAST of Carg09261 vs. TrEMBL
Match: tr|A0A0A0KGY3|A0A0A0KGY3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G366550 PE=4 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 5.2e-84 Identity = 163/171 (95.32%), Postives = 168/171 (98.25%), Query Frame = 0
BLAST of Carg09261 vs. TrEMBL
Match: tr|A0A1R3K211|A0A1R3K211_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_12139 PE=4 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 7.0e-81 Identity = 155/169 (91.72%), Postives = 165/169 (97.63%), Query Frame = 0
BLAST of Carg09261 vs. TrEMBL
Match: tr|A0A067LA00|A0A067LA00_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_15732 PE=4 SV=1) HSP 1 Score: 308.5 bits (789), Expect = 9.2e-81 Identity = 155/167 (92.81%), Postives = 163/167 (97.60%), Query Frame = 0
BLAST of Carg09261 vs. TrEMBL
Match: tr|A0A2I4H8C6|A0A2I4H8C6_9ROSI (peptidyl-prolyl cis-trans isomerase E OS=Juglans regia OX=51240 GN=LOC109014389 PE=4 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 1.2e-80 Identity = 155/169 (91.72%), Postives = 164/169 (97.04%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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