Carg05008 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATAGAAATTTCTAGTGGAACAGTCCGATGGAAAAAGAGCAACGCCTCGAGCTGATCAAACTCGCCATTGAGAGGCTGCTTGATGAGAACAAGAACAAGCAATCCTCTGATCGAAGCTACATCCACGATTGCGATGAAAACGGGGACCGTACTCTTCTCCACGATTTGCTCTCTCAGGTACGCAAGATTTACGGTTTTGATTTCCGAAACACAAACTTCGAAATTCTTATGGCTACGCCTTTTGTAATTTATTCTTCGAAATCGATGTTTGATTGAGGTTTTTGAGTTGTTGCTTCGTATTTCTTTGATTTCTTCTTCGTATGTTTCGATTGTGAGTTTCTGGAATTTCTTTCATTACGCACTGTTAGGAAATCTCAATTTATGGAGGAAAATTGAATTCGAATCTGGAGTGTTGTTGTTAAATCATTTGAAATCCACCTAGATTTGGCCTTCTGAACTTGCTCATGATCATATCACCCTTCCAAATCCTGTCTCTGCTTCTTTGGATAGTAAATTTGTAAACCAAATTCATTTTCCTCAACACCAACAGATAGAATCGCTGAAAGAAGGAACGGAATCAGAGGAGTTGGCTTCTGCATTAGATAATTTGAAATCGAAAGCTAAGAACTCTGATGATGATGATGATGATGAGTTTAGTAGAGAAGACATTGTTAAGGAACTGAAGAAGGTGAAAAGGCAAAACGTTTTAACTCAGTGTCTTGTCTCAGTGATGATAGTGGTGACTGTTGTTTGGCAGCTTTCTGAGGTCTCCATTATGTTGAATGTAAAAGATCAAATCAGCCATCCCTTTAGATTCCTGGGCAGTTTGATCTCAGGAGCGCTCAAACGCCCAAAAACCATTGTTGAGAATTCACCAAAACAAGAACATGATGAAGCTTCTATGCTTCCCACTCTCCAAATCCCAGAACTTCCTCATATGGGTTTGCAGTAATTTTGGATTTGATGATGGAAAACATTGGTTGTTCTTGAGCTACAAAGGGAGATGGGGGTTAGACAACAATTTTTCAAACGGTGCTGATGAAGAAACATGGAGAGATTTGCTTGGAGGAATCCCCAGATTACGTAATTGTTATATTTGTTTGGTTTTGTGAAAATTTGCTTTGTAATTTAGGGGTCGGATTATCTTTTGAGGAAAAAAAAAAAATCAAAATTAAAGTGAAAGAACCGTTTTTTCTCCTCCTAATTTAGTTTTCATAATTGGTAGCTTTTACATTAGAAACTATT CATAGAAATTTCTAGTGGAACAGTCCGATGGAAAAAGAGCAACGCCTCGAGCTGATCAAACTCGCCATTGAGAGGCTGCTTGATGAGAACAAGAACAAGCAATCCTCTGATCGAAGCTACATCCACGATTGCGATGAAAACGGGGACCGTACTCTTCTCCACGATTTGCTCTCTCAGATAGAATCGCTGAAAGAAGGAACGGAATCAGAGGAGTTGGCTTCTGCATTAGATAATTTGAAATCGAAAGCTAAGAACTCTGATGATGATGATGATGATGAGTTTAGTAGAGAAGACATTGTTAAGGAACTGAAGAAGGTGAAAAGGCAAAACGTTTTAACTCAGTGTCTTGTCTCAGTGATGATAGTGGTGACTGTTGTTTGGCAGCTTTCTGAGGTCTCCATTATGTTGAATGTAAAAGATCAAATCAGCCATCCCTTTAGATTCCTGGGCAGTTTGATCTCAGGAGCGCTCAAACGCCCAAAAACCATTGTTGAGAATTCACCAAAACAAGAACATGATGAAGCTTCTATGCTTCCCACTCTCCAAATCCCAGAACTTCCTCATATGGGTTTGCAGTAATTTTGGATTTGATGATGGAAAACATTGGTTGTTCTTGAGCTACAAAGGGAGATGGGGGTTAGACAACAATTTTTCAAACGGTGCTGATGAAGAAACATGGAGAGATTTGCTTGGAGGAATCCCCAGATTACGTAATTGTTATATTTGTTTGGTTTTGTGAAAATTTGCTTTGTAATTTAGGGGTCGGATTATCTTTTGAGGAAAAAAAAAAAATCAAAATTAAAGTGAAAGAACCGTTTTTTCTCCTCCTAATTTAGTTTTCATAATTGGTAGCTTTTACATTAGAAACTATT ATGGAAAAAGAGCAACGCCTCGAGCTGATCAAACTCGCCATTGAGAGGCTGCTTGATGAGAACAAGAACAAGCAATCCTCTGATCGAAGCTACATCCACGATTGCGATGAAAACGGGGACCGTACTCTTCTCCACGATTTGCTCTCTCAGATAGAATCGCTGAAAGAAGGAACGGAATCAGAGGAGTTGGCTTCTGCATTAGATAATTTGAAATCGAAAGCTAAGAACTCTGATGATGATGATGATGATGAGTTTAGTAGAGAAGACATTGTTAAGGAACTGAAGAAGGTGAAAAGGCAAAACGTTTTAACTCAGTGTCTTGTCTCAGTGATGATAGTGGTGACTGTTGTTTGGCAGCTTTCTGAGGTCTCCATTATGTTGAATGTAAAAGATCAAATCAGCCATCCCTTTAGATTCCTGGGCAGTTTGATCTCAGGAGCGCTCAAACGCCCAAAAACCATTGTTGAGAATTCACCAAAACAAGAACATGATGAAGCTTCTATGCTTCCCACTCTCCAAATCCCAGAACTTCCTCATATGGGTTTGCAGTAA MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESLKEGTESEELASALDNLKSKAKNSDDDDDDEFSREDIVKELKKVKRQNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVENSPKQEHDEASMLPTLQIPELPHMGLQ
BLAST of Carg05008 vs. NCBI nr
Match: XP_023522745.1 (uncharacterized protein LOC111786748 [Cucurbita pepo subsp. pepo] >XP_023513706.1 uncharacterized protein LOC111778234 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 301.6 bits (771), Expect = 1.8e-78 Identity = 169/187 (90.37%), Postives = 170/187 (90.91%), Query Frame = 0
BLAST of Carg05008 vs. NCBI nr
Match: XP_022959912.1 (uncharacterized protein LOC111460826 [Cucurbita moschata] >XP_022959913.1 uncharacterized protein LOC111460826 [Cucurbita moschata] >XP_022959914.1 uncharacterized protein LOC111460826 [Cucurbita moschata]) HSP 1 Score: 255.8 bits (652), Expect = 1.1e-64 Identity = 155/187 (82.89%), Postives = 155/187 (82.89%), Query Frame = 0
BLAST of Carg05008 vs. NCBI nr
Match: XP_008459843.1 (PREDICTED: uncharacterized protein LOC103498843 [Cucumis melo]) HSP 1 Score: 231.1 bits (588), Expect = 3.0e-57 Identity = 129/189 (68.25%), Postives = 154/189 (81.48%), Query Frame = 0
BLAST of Carg05008 vs. NCBI nr
Match: XP_004140639.1 (PREDICTED: uncharacterized protein LOC101222559 isoform X2 [Cucumis sativus] >KGN46465.1 hypothetical protein Csa_6G095320 [Cucumis sativus]) HSP 1 Score: 223.4 bits (568), Expect = 6.3e-55 Identity = 127/188 (67.55%), Postives = 150/188 (79.79%), Query Frame = 0
BLAST of Carg05008 vs. NCBI nr
Match: XP_023004225.1 (uncharacterized protein LOC111497620 [Cucurbita maxima]) HSP 1 Score: 214.9 bits (546), Expect = 2.2e-52 Identity = 138/202 (68.32%), Postives = 141/202 (69.80%), Query Frame = 0
BLAST of Carg05008 vs. TAIR10
Match: AT1G27300.1 (unknown protein) HSP 1 Score: 55.1 bits (131), Expect = 5.4e-08 Identity = 63/193 (32.64%), Postives = 92/193 (47.67%), Query Frame = 0
BLAST of Carg05008 vs. TrEMBL
Match: tr|A0A1S3CAM6|A0A1S3CAM6_CUCME (uncharacterized protein LOC103498843 OS=Cucumis melo OX=3656 GN=LOC103498843 PE=4 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 2.0e-57 Identity = 129/189 (68.25%), Postives = 154/189 (81.48%), Query Frame = 0
BLAST of Carg05008 vs. TrEMBL
Match: tr|A0A0A0K9P4|A0A0A0K9P4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095320 PE=4 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 4.2e-55 Identity = 127/188 (67.55%), Postives = 150/188 (79.79%), Query Frame = 0
BLAST of Carg05008 vs. TrEMBL
Match: tr|B9RMD0|B9RMD0_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1079710 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 2.6e-25 Identity = 76/181 (41.99%), Postives = 111/181 (61.33%), Query Frame = 0
BLAST of Carg05008 vs. TrEMBL
Match: tr|A0A2C9UMU0|A0A2C9UMU0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G010300 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.3e-24 Identity = 76/185 (41.08%), Postives = 115/185 (62.16%), Query Frame = 0
BLAST of Carg05008 vs. TrEMBL
Match: tr|A0A2N9HE06|A0A2N9HE06_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38294 PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 2.9e-24 Identity = 86/197 (43.65%), Postives = 118/197 (59.90%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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