Carg11546 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGTTTACCTCCTCGTAGATTAATGACCTCAGATGGGCCCAGTTCCAGGCCCAATAAGAGGAAAGAGAGAAAGGGCTTTGATGATGAGGCCCACCAACTGTCATTCACAGCTAAAGTATCGAAGCCGACACCGCCTCAATCCAACCACCTCCTAGCCGGCTACTTGGCTCACGAGTTCTTCACCAAAGGCACCCTCTTTGGCCAAGCTTGGGATCATCCGGATGTGTCTATGGCGGCTTCACCACCTGACCTCAACGAGAAACGCCAAGCCGAGCTGCATCCCAAGAATTACCAGTCCTACGTGGAGGTAGCTAATTTGTTGAAACACGGTGGGGCCCACTTTCAAGGTATTGTCAATCCCACCCAGCTAGCTCGGTCGCTAAACCTATGA ATGCGTTTACCTCCTCGTAGATTAATGACCTCAGATGGGCCCAGTTCCAGGCCCAATAAGAGGAAAGAGAGAAAGGGCTTTGATGATGAGGCCCACCAACTGTCATTCACAGCTAAAGTATCGAAGCCGACACCGCCTCAATCCAACCACCTCCTAGCCGGCTACTTGGCTCACGAGTTCTTCACCAAAGGCACCCTCTTTGGCCAAGCTTGGGATCATCCGGATGTGTCTATGGCGGCTTCACCACCTGACCTCAACGAGAAACGCCAAGCCGAGCTGCATCCCAAGAATTACCAGTCCTACGTGGAGGTAGCTAATTTGTTGAAACACGGTGGGGCCCACTTTCAAGGTATTGTCAATCCCACCCAGCTAGCTCGGTCGCTAAACCTATGA ATGCGTTTACCTCCTCGTAGATTAATGACCTCAGATGGGCCCAGTTCCAGGCCCAATAAGAGGAAAGAGAGAAAGGGCTTTGATGATGAGGCCCACCAACTGTCATTCACAGCTAAAGTATCGAAGCCGACACCGCCTCAATCCAACCACCTCCTAGCCGGCTACTTGGCTCACGAGTTCTTCACCAAAGGCACCCTCTTTGGCCAAGCTTGGGATCATCCGGATGTGTCTATGGCGGCTTCACCACCTGACCTCAACGAGAAACGCCAAGCCGAGCTGCATCCCAAGAATTACCAGTCCTACGTGGAGGTAGCTAATTTGTTGAAACACGGTGGGGCCCACTTTCAAGGTATTGTCAATCCCACCCAGCTAGCTCGGTCGCTAAACCTATGA MRLPPRRLMTSDGPSSRPNKRKERKGFDDEAHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWDHPDVSMAASPPDLNEKRQAELHPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARSLNL
BLAST of Carg11546 vs. NCBI nr
Match: PQQ20644.1 (uncharacterized protein Pyn_16343 [Prunus yedoensis var. nudiflora]) HSP 1 Score: 118.6 bits (296), Expect = 1.6e-23 Identity = 74/144 (51.39%), Postives = 88/144 (61.11%), Query Frame = 0
BLAST of Carg11546 vs. NCBI nr
Match: XP_008459949.1 (PREDICTED: uncharacterized protein LOC103498915 [Cucumis melo]) HSP 1 Score: 114.4 bits (285), Expect = 2.9e-22 Identity = 66/119 (55.46%), Postives = 69/119 (57.98%), Query Frame = 0
BLAST of Carg11546 vs. NCBI nr
Match: OAY32682.1 (hypothetical protein MANES_13G037700 [Manihot esculenta]) HSP 1 Score: 113.2 bits (282), Expect = 6.5e-22 Identity = 68/147 (46.26%), Postives = 86/147 (58.50%), Query Frame = 0
BLAST of Carg11546 vs. NCBI nr
Match: XP_004289974.1 (PREDICTED: uncharacterized protein LOC101296725 [Fragaria vesca subsp. vesca]) HSP 1 Score: 112.8 bits (281), Expect = 8.5e-22 Identity = 71/141 (50.35%), Postives = 83/141 (58.87%), Query Frame = 0
BLAST of Carg11546 vs. NCBI nr
Match: XP_021664504.1 (uncharacterized protein LOC110653249 [Hevea brasiliensis]) HSP 1 Score: 108.2 bits (269), Expect = 2.1e-20 Identity = 65/151 (43.05%), Postives = 86/151 (56.95%), Query Frame = 0
BLAST of Carg11546 vs. TAIR10
Match: AT1G04000.1 (unknown protein) HSP 1 Score: 85.1 bits (209), Expect = 3.4e-17 Identity = 60/155 (38.71%), Postives = 75/155 (48.39%), Query Frame = 0
BLAST of Carg11546 vs. TAIR10
Match: AT5G44060.1 (unknown protein) HSP 1 Score: 80.9 bits (198), Expect = 6.5e-16 Identity = 45/100 (45.00%), Postives = 54/100 (54.00%), Query Frame = 0
BLAST of Carg11546 vs. TAIR10
Match: AT3G23440.1 (embryo sac development arrest 6) HSP 1 Score: 63.5 bits (153), Expect = 1.1e-10 Identity = 35/86 (40.70%), Postives = 49/86 (56.98%), Query Frame = 0
BLAST of Carg11546 vs. TrEMBL
Match: tr|A0A1S3CBD7|A0A1S3CBD7_CUCME (uncharacterized protein LOC103498915 OS=Cucumis melo OX=3656 GN=LOC103498915 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 1.9e-22 Identity = 66/119 (55.46%), Postives = 69/119 (57.98%), Query Frame = 0
BLAST of Carg11546 vs. TrEMBL
Match: tr|A0A2C9UPY2|A0A2C9UPY2_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G037700 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 4.3e-22 Identity = 68/147 (46.26%), Postives = 86/147 (58.50%), Query Frame = 0
BLAST of Carg11546 vs. TrEMBL
Match: tr|A0A2I4F664|A0A2I4F664_9ROSI (uncharacterized protein LOC108995916 OS=Juglans regia OX=51240 GN=LOC108995916 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 3.1e-20 Identity = 66/147 (44.90%), Postives = 86/147 (58.50%), Query Frame = 0
BLAST of Carg11546 vs. TrEMBL
Match: tr|A0A2C9UT88|A0A2C9UT88_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G034900 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 4.0e-20 Identity = 68/152 (44.74%), Postives = 85/152 (55.92%), Query Frame = 0
BLAST of Carg11546 vs. TrEMBL
Match: tr|A0A0A0KDC0|A0A0A0KDC0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G088100 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 5.3e-20 Identity = 72/157 (45.86%), Postives = 75/157 (47.77%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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