ClCG06G001520 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGTCACCCAGGCCCAATAAGAGAAAAGAAAGAGAGGGCCTTGATGATGAGGCCCACCAACTATCATTAACGGCTAAAGTACCGAGGCAGCCGCCGCCGTCTCATGCGAACCAGCTCTTAGCCGGCTACTTGGCTCACGAGTTCCTCACTAAAGGGACTCTCTTCGGCCAGGCTTGGGATCCTGATCTTCCGGATCCGACTATGGCTTCTTCACTCCCTGAGCCAAGCGAGAAACGCCAAGCCGAACTGCACCTCAAGAGTTACCAATCCTACGTGGAGGTAGCTAATTTGTTGAAACATAGTGGGCCCCACTTTCAAGGTATTGTAAATCCCACCCAGCTAGCTCACTTGCTAAACTTATGA ATGACGTCACCCAGGCCCAATAAGAGAAAAGAAAGAGAGGGCCTTGATGATGAGGCCCACCAACTATCATTAACGGCTAAAGTACCGAGGCAGCCGCCGCCGTCTCATGCGAACCAGCTCTTAGCCGGCTACTTGGCTCACGAGTTCCTCACTAAAGGGACTCTCTTCGGCCAGGCTTGGGATCCTGATCTTCCGGATCCGACTATGGCTTCTTCACTCCCTGAGCCAAGCGAGAAACGCCAAGCCGAACTGCACCTCAAGAGTTACCAATCCTACGTGGAGGTAGCTAATTTGTTGAAACATAGTGGGCCCCACTTTCAAGGTATTGTAAATCCCACCCAGCTAGCTCACTTGCTAAACTTATGA ATGACGTCACCCAGGCCCAATAAGAGAAAAGAAAGAGAGGGCCTTGATGATGAGGCCCACCAACTATCATTAACGGCTAAAGTACCGAGGCAGCCGCCGCCGTCTCATGCGAACCAGCTCTTAGCCGGCTACTTGGCTCACGAGTTCCTCACTAAAGGGACTCTCTTCGGCCAGGCTTGGGATCCTGATCTTCCGGATCCGACTATGGCTTCTTCACTCCCTGAGCCAAGCGAGAAACGCCAAGCCGAACTGCACCTCAAGAGTTACCAATCCTACGTGGAGGTAGCTAATTTGTTGAAACATAGTGGGCCCCACTTTCAAGGTATTGTAAATCCCACCCAGCTAGCTCACTTGCTAAACTTATGA MTSPRPNKRKEREGLDDEAHQLSLTAKVPRQPPPSHANQLLAGYLAHEFLTKGTLFGQAWDPDLPDPTMASSLPEPSEKRQAELHLKSYQSYVEVANLLKHSGPHFQGIVNPTQLAHLLNL
BLAST of ClCG06G001520 vs. TrEMBL
Match: A0A0A0KDC0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G088100 PE=4 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 1.1e-37 Identity = 97/151 (64.24%), Postives = 102/151 (67.55%), Query Frame = 1
BLAST of ClCG06G001520 vs. TrEMBL
Match: A0A0D2N9W4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G255300 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 5.4e-21 Identity = 65/128 (50.78%), Postives = 77/128 (60.16%), Query Frame = 1
BLAST of ClCG06G001520 vs. TrEMBL
Match: M5VP77_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012995mg PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 1.6e-20 Identity = 60/125 (48.00%), Postives = 74/125 (59.20%), Query Frame = 1
BLAST of ClCG06G001520 vs. TrEMBL
Match: B9GRX5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s26110g PE=4 SV=2) HSP 1 Score: 99.4 bits (246), Expect = 3.2e-18 Identity = 56/129 (43.41%), Postives = 73/129 (56.59%), Query Frame = 1
BLAST of ClCG06G001520 vs. TrEMBL
Match: A0A067K2K6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17658 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 2.7e-17 Identity = 57/130 (43.85%), Postives = 79/130 (60.77%), Query Frame = 1
BLAST of ClCG06G001520 vs. TAIR10
Match: AT5G44060.1 (AT5G44060.1 unknown protein) HSP 1 Score: 79.3 bits (194), Expect = 1.8e-15 Identity = 43/92 (46.74%), Postives = 52/92 (56.52%), Query Frame = 1
BLAST of ClCG06G001520 vs. TAIR10
Match: AT1G04000.1 (AT1G04000.1 unknown protein) HSP 1 Score: 69.3 bits (168), Expect = 1.8e-12 Identity = 50/137 (36.50%), Postives = 62/137 (45.26%), Query Frame = 1
BLAST of ClCG06G001520 vs. TAIR10
Match: AT3G23440.1 (AT3G23440.1 embryo sac development arrest 6) HSP 1 Score: 62.4 bits (150), Expect = 2.2e-10 Identity = 36/84 (42.86%), Postives = 48/84 (57.14%), Query Frame = 1
BLAST of ClCG06G001520 vs. NCBI nr
Match: gi|778711659|ref|XP_011656778.1| (PREDICTED: uncharacterized protein LOC105435768 [Cucumis sativus]) HSP 1 Score: 164.1 bits (414), Expect = 1.5e-37 Identity = 97/151 (64.24%), Postives = 102/151 (67.55%), Query Frame = 1
BLAST of ClCG06G001520 vs. NCBI nr
Match: gi|659119983|ref|XP_008459949.1| (PREDICTED: uncharacterized protein LOC103498915 [Cucumis melo]) HSP 1 Score: 157.1 bits (396), Expect = 1.9e-35 Identity = 94/154 (61.04%), Postives = 102/154 (66.23%), Query Frame = 1
BLAST of ClCG06G001520 vs. NCBI nr
Match: gi|645259985|ref|XP_008235622.1| (PREDICTED: uncharacterized protein LOC103334434 [Prunus mume]) HSP 1 Score: 111.7 bits (278), Expect = 9.1e-22 Identity = 62/125 (49.60%), Postives = 73/125 (58.40%), Query Frame = 1
BLAST of ClCG06G001520 vs. NCBI nr
Match: gi|823128491|ref|XP_012443021.1| (PREDICTED: uncharacterized protein LOC105767949 [Gossypium raimondii]) HSP 1 Score: 108.6 bits (270), Expect = 7.7e-21 Identity = 65/128 (50.78%), Postives = 77/128 (60.16%), Query Frame = 1
BLAST of ClCG06G001520 vs. NCBI nr
Match: gi|595801659|ref|XP_007201858.1| (hypothetical protein PRUPE_ppa012995mg [Prunus persica]) HSP 1 Score: 107.1 bits (266), Expect = 2.2e-20 Identity = 60/125 (48.00%), Postives = 74/125 (59.20%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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