Carg11486 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTTGAGAGATATTGGAGCCACTCTGCCTCCTGGGTTCAGGTTTTACCCTAGCGATGAGGAGTTGGTTTGCCATTATTTGTACAAAAAGATAGCTAATCAAGAGGCTTTGAGGGGCACTTTGGTGGAGATTGACTTGCATACTTGTGAGCCATGGCAACTCCCTGGTATGTATACCTTTACAATTCGTCTCGTGTTTCTTAGTTCATATTTCGTTCGAAAACGTTCATGGGTTTGAGAGAGTGAATCATCGACTTTTGAAACAACGAGAGATCTCACGTCTGTTAACAGTGTCGAAACCTCTCCCGAACATACTCGTTTTAAAATCGTGAGGCTGATGACAGTAATTAGGTGAAAAATCCGAGTTAAAATCGGAGGGGTAAGGAAGAAATTTTTGGTATAATGATCGGTTTTCCTAAAACCCTAATCTCGAAACGAGAATTTCCCACCTTAAGTTGATAATTATGGAGTTAGGTGAAAAGAACGACCCCACTTGATTATACGTTACTATCTGAACTACAACCATTGTACACATTATGTGTCACGGGATAATCGATGATATAATTAATCACAAAACACGATATCTAACTGATGAATTGTCGTGTTATAAATACTTTTACAAGTGGCATAAAAGAAGCTTAATTTTTAAGCCATATTTGATTAGTATTCTCATTTATTTTTATCGTTTAATTATATTGATTTTGATAGAATTCAGAGTATTAAGAATTATAGAGACGGGAATTCTCGAACCTTCGACTATAAAAAGAAAAATAATTATTATTAATGCTTTAACGATTTAAGTTGTGTTTATATTTAACAATTTTTTTACTGCATCGCTCTCTCATCTTTTAATTGAAAGTATATAATTTATATCAACCATAAATAATTTAAAATATTTGATCTTTAAAATATATATATATATATATATATATATATATATATTTAGCATTTTGAAAATAAATAAAAAATATTTAAAATTTAATAATTAAAAAAATGGTCAAATTTGTGCTAGTAATTAACAAAGAAAATAATAGAGTTATATTAAAAAAATAAGTGTAATCCTCTAAAAAAGAAAGAAAATTTGTTCAGTAATTACGAAAATACCCTTAGGGCTGATAATTAGGTGTCTTACCATTGAGTCGTACTCGAAGAAAAGGTGGGGATAGGATGACGTTTTTTGCTCTCGATTGAAGAAGAAAAAGAAGATCATGACAGTGGATGACAACCCGACAATCTTTTTCGAGTAGGGTTATTATTGTCAAAATTGTTAAGGACTTAATTGTTTGGTTTTAAAATTTAAGGACTAAATTGATACGATTAGAGTCGGGTCTGTCTTAAAATTTAAAAAATAAATAAAATAATAAAATTTTTGTGGTGGACTAATAAGGATATGAAATAATTAGTATTTGTCGAGGGCGAATTCTATTCCCATATATGTCGATAAGGGCATTATATCATAACTATGGTCCAAATACAAGCTTTGTTCTCTTCTCAAAAAAAACTGATTCATTCAGAAAAAAAAAAGAAAAAAAATTCATATTTTTCAACATTCAAATGATTTTTGTGAAGATAATCTTCCCTAAATCTGTTTCTATATTGATTTTCGATAGTTAGTAGTCGATCGAACTTCCTAGATCTTATCCTTTGAGGCATCTTGAATTCGAGGGCTCGTACCTCGGGTAGGGCAGTTGAGCTAGAGTGAGCTCAGCAGTCGACCTGTGTTTTTAGGTGCATGCAACAGTTGACATTGACATATACTAATAAGTACTCAATTTCTTTTTATGAATGTAGAGGTAGCCAAGTTAAATGGGAACGAGTGGTACTTCTTCAGCTTTAGGGATCGGAAATACGCGACTGGGTTTCGTACGAATCGAGCAACGACAGCTGGGTATTGGAAGGCAACAGGGAAAGATCGAATGGTGGTGGATCCAACTAGAGGTGAGGTGGTCGGAATGAGAAAGACTTTGGTGTTTTATAGAAACCGAGCTCCGAATGGAATCAAAACTGGCTGGATCATGCACGAGTTTCGTATCGAGACACCGCATATGCCTCCGAAGGTCTATTTCTTACCCTCTTTTCGATTTTTTAGGTTCATATTTAGAGTTATTGATATCATTTCGTTATCTCCCACGATATCGTAATTTAGATAAGAGGGTTTTTTGGGAATGTCGACACGAACATAGCTAAAAACAACTTTAAAAGAAACAAAAATGAAGAGGTTGTTTATCCATTGTACAGGAGGATTGGGTTCTATGCAGGGTGTTTTACAAGAGCAAACCAGATCAGGACATGGCAGAAACAGCAGCATACACCACCTCACAGTTTCCATTCGAGGCGGTGGCGGGGGCGGCGGGTGCTGCACCGTCGTCCTACTGCTTGCTGCCGAACCACGTCCAGTTTGGACCGGGCGACAACTCGACGCTGACGAACTCAACCGGGCTGCTCCCATGGGAGCATGAGCAATGAAGGAAGCAGGCATTAGAAGACATCCTTGATGGCGAGAAGTTGTGTGAGTTCGAAACGACAGCAAGCTGAAATATGGAAGATGATTCGAAAACACCAAACCAAATATGAGGTTAACCTTATTAATT ATGGGTTTGAGAGATATTGGAGCCACTCTGCCTCCTGGGTTCAGGTTTTACCCTAGCGATGAGGAGTTGGTTTGCCATTATTTGTACAAAAAGATAGCTAATCAAGAGGCTTTGAGGGGCACTTTGGTGGAGATTGACTTGCATACTTGTGAGCCATGGCAACTCCCTGAGGTAGCCAAGTTAAATGGGAACGAGTGGTACTTCTTCAGCTTTAGGGATCGGAAATACGCGACTGGGTTTCGTACGAATCGAGCAACGACAGCTGGGTATTGGAAGGCAACAGGGAAAGATCGAATGGTGGTGGATCCAACTAGAGGTGAGGTGGTCGGAATGAGAAAGACTTTGGTGTTTTATAGAAACCGAGCTCCGAATGGAATCAAAACTGGCTGGATCATGCACGAGTTTCGTATCGAGACACCGCATATGCCTCCGAAGGAGGATTGGGTTCTATGCAGGGTGTTTTACAAGAGCAAACCAGATCAGGACATGGCAGAAACAGCAGCATACACCACCTCACAGTTTCCATTCGAGGCGGTGGCGGGGGCGGCGGGTGCTGCACCGTCGTCCTACTGCTTGCTGCCGAACCACGTCCAGTTTGGACCGGGCGACAACTCGACGCTGACGAACTCAACCGGGCTGCTCCCATGGGAGCATGAGCAATGAAGGAAGCAGGCATTAGAAGACATCCTTGATGGCGAGAAGTTGTGTGAGTTCGAAACGACAGCAAGCTGAAATATGGAAGATGATTCGAAAACACCAAACCAAATATGAGGTTAACCTTATTAATT ATGGGTTTGAGAGATATTGGAGCCACTCTGCCTCCTGGGTTCAGGTTTTACCCTAGCGATGAGGAGTTGGTTTGCCATTATTTGTACAAAAAGATAGCTAATCAAGAGGCTTTGAGGGGCACTTTGGTGGAGATTGACTTGCATACTTGTGAGCCATGGCAACTCCCTGAGGTAGCCAAGTTAAATGGGAACGAGTGGTACTTCTTCAGCTTTAGGGATCGGAAATACGCGACTGGGTTTCGTACGAATCGAGCAACGACAGCTGGGTATTGGAAGGCAACAGGGAAAGATCGAATGGTGGTGGATCCAACTAGAGGTGAGGTGGTCGGAATGAGAAAGACTTTGGTGTTTTATAGAAACCGAGCTCCGAATGGAATCAAAACTGGCTGGATCATGCACGAGTTTCGTATCGAGACACCGCATATGCCTCCGAAGGAGGATTGGGTTCTATGCAGGGTGTTTTACAAGAGCAAACCAGATCAGGACATGGCAGAAACAGCAGCATACACCACCTCACAGTTTCCATTCGAGGCGGTGGCGGGGGCGGCGGGTGCTGCACCGTCGTCCTACTGCTTGCTGCCGAACCACGTCCAGTTTGGACCGGGCGACAACTCGACGCTGACGAACTCAACCGGGCTGCTCCCATGGGAGCATGAGCAATGA MGLRDIGATLPPGFRFYPSDEELVCHYLYKKIANQEALRGTLVEIDLHTCEPWQLPEVAKLNGNEWYFFSFRDRKYATGFRTNRATTAGYWKATGKDRMVVDPTRGEVVGMRKTLVFYRNRAPNGIKTGWIMHEFRIETPHMPPKEDWVLCRVFYKSKPDQDMAETAAYTTSQFPFEAVAGAAGAAPSSYCLLPNHVQFGPGDNSTLTNSTGLLPWEHEQ
BLAST of Carg11486 vs. NCBI nr
Match: XP_023548941.1 (NAC domain-containing protein 21/22-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 437.2 bits (1123), Expect = 3.3e-119 Identity = 203/217 (93.55%), Postives = 205/217 (94.47%), Query Frame = 0
BLAST of Carg11486 vs. NCBI nr
Match: XP_022953869.1 (NAC domain-containing protein 21/22-like [Cucurbita moschata]) HSP 1 Score: 431.4 bits (1108), Expect = 1.8e-117 Identity = 201/217 (92.63%), Postives = 202/217 (93.09%), Query Frame = 0
BLAST of Carg11486 vs. NCBI nr
Match: XP_022991565.1 (NAC domain-containing protein 21/22-like [Cucurbita maxima]) HSP 1 Score: 428.7 bits (1101), Expect = 1.2e-116 Identity = 200/217 (92.17%), Postives = 202/217 (93.09%), Query Frame = 0
BLAST of Carg11486 vs. NCBI nr
Match: XP_004149326.1 (PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Cucumis sativus]) HSP 1 Score: 379.0 bits (972), Expect = 1.1e-101 Identity = 177/219 (80.82%), Postives = 195/219 (89.04%), Query Frame = 0
BLAST of Carg11486 vs. NCBI nr
Match: XP_022157872.1 (NAC domain-containing protein 21/22-like [Momordica charantia]) HSP 1 Score: 373.6 bits (958), Expect = 4.5e-100 Identity = 179/218 (82.11%), Postives = 192/218 (88.07%), Query Frame = 0
BLAST of Carg11486 vs. TAIR10
Match: AT4G28530.1 (NAC domain containing protein 74) HSP 1 Score: 268.9 bits (686), Expect = 2.8e-72 Identity = 124/174 (71.26%), Postives = 140/174 (80.46%), Query Frame = 0
BLAST of Carg11486 vs. TAIR10
Match: AT1G56010.2 (NAC domain containing protein 1) HSP 1 Score: 206.5 bits (524), Expect = 1.7e-53 Identity = 92/160 (57.50%), Postives = 119/160 (74.38%), Query Frame = 0
BLAST of Carg11486 vs. TAIR10
Match: AT1G76420.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein) HSP 1 Score: 202.2 bits (513), Expect = 3.3e-52 Identity = 90/151 (59.60%), Postives = 113/151 (74.83%), Query Frame = 0
BLAST of Carg11486 vs. TAIR10
Match: AT3G12977.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein) HSP 1 Score: 199.5 bits (506), Expect = 2.1e-51 Identity = 89/163 (54.60%), Postives = 116/163 (71.17%), Query Frame = 0
BLAST of Carg11486 vs. TAIR10
Match: AT2G24430.1 (NAC domain containing protein 38) HSP 1 Score: 199.1 bits (505), Expect = 2.8e-51 Identity = 86/152 (56.58%), Postives = 112/152 (73.68%), Query Frame = 0
BLAST of Carg11486 vs. Swiss-Prot
Match: sp|Q84TE6|NAC22_ARATH (NAC domain-containing protein 21/22 OS=Arabidopsis thaliana OX=3702 GN=NAC021 PE=1 SV=2) HSP 1 Score: 206.5 bits (524), Expect = 3.1e-52 Identity = 92/160 (57.50%), Postives = 119/160 (74.38%), Query Frame = 0
BLAST of Carg11486 vs. Swiss-Prot
Match: sp|Q9S851|NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana OX=3702 GN=NAC031 PE=1 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 5.9e-51 Identity = 90/151 (59.60%), Postives = 113/151 (74.83%), Query Frame = 0
BLAST of Carg11486 vs. Swiss-Prot
Match: sp|Q9FLJ2|NC100_ARATH (NAC domain-containing protein 100 OS=Arabidopsis thaliana OX=3702 GN=NAC100 PE=2 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 8.0e-48 Identity = 90/155 (58.06%), Postives = 113/155 (72.90%), Query Frame = 0
BLAST of Carg11486 vs. Swiss-Prot
Match: sp|O65508|NAC76_ARATH (NAC domain-containing protein 76 OS=Arabidopsis thaliana OX=3702 GN=NAC076 PE=1 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 1.8e-47 Identity = 92/182 (50.55%), Postives = 126/182 (69.23%), Query Frame = 0
BLAST of Carg11486 vs. Swiss-Prot
Match: sp|Q9SL41|NAC37_ARATH (NAC domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=NAC037 PE=1 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 4.0e-47 Identity = 98/201 (48.76%), Postives = 131/201 (65.17%), Query Frame = 0
BLAST of Carg11486 vs. TrEMBL
Match: tr|A0A1S3C7P3|A0A1S3C7P3_CUCME (NAC domain-containing protein 21/22-like OS=Cucumis melo OX=3656 GN=LOC103497633 PE=4 SV=1) HSP 1 Score: 363.2 bits (931), Expect = 4.0e-97 Identity = 174/217 (80.18%), Postives = 186/217 (85.71%), Query Frame = 0
BLAST of Carg11486 vs. TrEMBL
Match: tr|A0A2P6PV96|A0A2P6PV96_ROSCH (Putative transcription factor NAM family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0287861 PE=4 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 6.5e-87 Identity = 145/162 (89.51%), Postives = 154/162 (95.06%), Query Frame = 0
BLAST of Carg11486 vs. TrEMBL
Match: tr|A0A286LLT4|A0A286LLT4_ROSCH (NAC family protein NAC31 OS=Rosa chinensis OX=74649 PE=2 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 6.5e-87 Identity = 145/162 (89.51%), Postives = 154/162 (95.06%), Query Frame = 0
BLAST of Carg11486 vs. TrEMBL
Match: tr|A0A0M4G3S7|A0A0M4G3S7_MANES (NAC transcription factors 94 OS=Manihot esculenta OX=3983 GN=MANES_12G033500 PE=2 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 8.5e-87 Identity = 150/177 (84.75%), Postives = 159/177 (89.83%), Query Frame = 0
BLAST of Carg11486 vs. TrEMBL
Match: tr|A0A1S3TN37|A0A1S3TN37_VIGRR (protein CUP-SHAPED COTYLEDON 3-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106757101 PE=4 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 8.5e-87 Identity = 147/165 (89.09%), Postives = 156/165 (94.55%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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