Lsi02G021550 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi02G021550
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	NAC domain protein,
Location	chr02 : 27906105 .. 27912240 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGAGTTGTAAGAAAAAAAAATGGGTTTGAGAGATATTGGAGCAACTCTTCCTCCTGGGTTTAGGTTTTATCCAAGTGATGAGGAGTTGGTTTGCCATTATTTGTATAAAAAGATTGCAAATGAAGAAGCTTTGAGGGGCACATTGGTGGAGATTGACTTGCATACTTGTGAGCCTTGGCAACTTCCTGGTATGTATAATTTCCTTTTAGAATTTCCTATGGTTTTACAACTTTCATGAGATTACTCAAAAAACTCATAAGATTTTTGTAATGGGTTTTAATTTTTAGTGTTTGTTTTGTGTTTAATTATATATTAAGCCCTATTTTTGTGTAGTTAATGTTCTTTTGAATCATAAATCTTTTTCTTCTTTAATTTATTTTGAGTTTTTAAGTTGGATACTATCATCATCAAGTTTCGATATAGTAATCGATGTCTTACCAGTCAAAAGTTTTACACCATTAAAATTTTCTCCTAAAAAGATTATGTAAATCAAAGCTAGATTATTAATAGAAAATCATTGTTTTTTTCAACTCGTTATTTTTCTCGAGAAAAAAAAAAAGAGGAAAAAAGAAAAAAGAACTCATGTTTTTTCCCCTTCCCTAAAACCCTAATCTCTCTAAATGAGGATTTTCCTACCCAAGTTAGGAAACGGATGGGGAATTTAATAATCATGGAGTTGGAGATAAGAAACGCTCCACGGGTCCCACCTGACTATACGTTACGATTCAAACTGAAATTATTGAACATATCATGTTTTACGAGATAATCCATCACTGAACACGATATCAGCTGTCAGCTGACTATCGCGTTATAAATATAAATACTTTTCTAACTGGCATAAAATAAACTTAAACTTCATGCCATATTTGATTAGTTTCTTATTTACCATATGATCGTTTAATTATATTGATTTTTTTATAGAATTTATAGCATTACAATTACAAGGATGTGGGATTCTCGAACCTTCGAGTATAAAAAGAAAAACAAGTGTTGTTGATTTTGAATCATTTGAGTTATGTTTAGGTTTACTTTTTTTTTTTTTTTTTGAGTTCAATAATATGAGATTGGAGGATTCGAACATCTAATATCTTAGCCAACGGTGATTGTTTTCAAATTGAAGAAGAAAAAGGTGTGGGAAATGGGGTTCGAGAAGAAGTAGACGGAGGAAGGTTTAATTTGTTGGGATCAAGAAATTAAAGATGAGGAGTGTGGTTTTTTTTTTTATGACGATGAAAATGAAGATTGAGACGGTGAGCGACGACGAGAGATGGAGGCTATAGCTTCGTTGGAGGAGGGTTGAAGGAGAAGAGAGAGAGAGGGAGAGAGTTTTTTTCTAATTATTTATTTTATTCAAATAATTGCCACGTTAGCTTCCGTTACTTATTTAATGGTTACCGTAAATAAAAAGACCAAAATTGATTGTTTTCTAAACGTTGAAGATTCGATTGCCCAATTTTGAAATCTATAAACTAAATCTAGACAAAAGTTTCAAACTCCATGGACCAAAAAAAATAGATTATCCAAAAATTTATTTAAAGAATTAGAGACTAAACTATGATTCAAGGAATTATATTATTTAACAAAGTGTATATAATTAAGATTTAAAAATAATTAGGTTATAAAATAAAATAAATAGAAAAAAATAGATTAATAATAAAAAAAAAATTTATTATAAATAGAAAAAATGTCAAACTATTTACAAATATAGAAAAATTTCACTGTCTTTCAACGATAGATCGCAATAGAAGTTTATTGCGGTCGATTATTTAGTGATAGAAGTCTATCGAGATATATCGCTAATAGATAGTGAAATTTTTTTATATTTATTAATAGTTTGATATTTTTTTAAAAAAAAAAAAAAATATCCTGATAAAATTTTGTCGTGTAATTAAGAAGGCAATGAAATAATTACTATTTGTGAGAATGGACAGGCCAATCCTATTCCCATATTTGTCCAGAATGCCATTATATATCATCATAAACAAATGTCCAAATACCAACTTTGTTCTCTTCTCAGAAAACTGACTCATTTCAGAAGAAAATAGAGAAAAATGACTCATTTTTTTCAACATGCAAATGATTTATGGAAGGTTTTGTTGTCCCCTTCCCCTACGTTTGTTTTGTTTATTGATTGACACATGTATTTTCATTAATTAACCATTTGTTTAATTTGATCATATTATAAATTAAAACTATATGGATAATTTATAATACATAATAATGTGACATGTAATAATATCATTAGATTCCATTATTGAAGTCTCTTTTTGAATTGAGTACTTCTCTCATTAGTCTCACTTTTTGAGAGATATGGATCTGGAAGTGACTTTGAGTTAACAAGAAATGCTTTGGATATAATCTCCTAAATTGTTTGTTGTTTTTATTGGAGAAAGATGACTTTTAATAATTTCTTGACAAAAAGATCCAAAAAAAAAAATAATATATATGAAAATTTTTTATCGATAAAAAAAATGTCAAACTATTTACAAAAAAAAATAGCAAAAAATATTAATAGACTTCTATCAGTGTCTATCACAACTATCTAAAAATTTTGCTATTTTGTATAAATAGTTTTCCTAATTTCAAGGATGTTTCCACTATTACTAGATCAACCTATGATAGTTGTCCTTCCTATTTTCGCCGAAATCATAATTTAAAACCTAATTGCTTTCTTTACCTTTTATGTTATTTTTATTTTTCATATGTGCTCTTATTTATTATTTGATGTAAAGCCTAATTGCTTTCTTTACCTTTTATGTTATTTTTATTTTTCATATGTGCTCTTATTTATTATTTGATGTAAAGTTAATAAGGTTGATTGCACATTCAACTTTTGCTTGAAATGTTTTCAAATAGGTTTTTCTTTTTTTTAAGCACAACAAAAAGATAAAGGGAATTTTCATAGATGCATGTGTGACATTATCGTCCTTTTAAGTTTCTTATACCCAAAACTTCATTAATTAAGTTACCATTATACCAAAAAAAAAAAAAATTAAACCTTTTGCACATAATAGTGATTTAATTCAAAGATATTTTTAAATATAACAAAATGAGCCAAAATGTTTATAAATATAGCAAAATACCACTATCTATCACTGTCTATCACTAATAGACAATAATATTTTGCTATATTTAAAAATATTTCTAGCAGTTTTGTCATTGAAAATATTTATTCTTTAATTAATATATGGTATCAAAAATAGCACTTATATGTTGAAACTTTTCTAGATGTGTAAAATAGTGTGGCGAGAGTAAAACTTAAGCTTTTAAATTCAATGACAACTTCATAAATTGAGACTTTTACAAGCTTAAAATAATTTTTATGATAATTAACTATTGAGTTATGTTAATTTGTGAACAAACATCATCAGTGTTAAAGATAGGTATTTTTCTCAATTCAAACTTATAATCATTACATCAAATATTATTAATCTCTCTCATAAATGATGATTATGCTGAAACCAAAAAATTGATGACGACAACATTAACCCTTGTTGCCCTTTGGCCTATCAAATCAAATTCTTTTTTCCCATAAATTACAACTCTTCTACCATCACTCTTAATTGGCATATATATATTTATGTAATATACATTTCTCTCTTTTATATATGTTTCTAACATTACCCCTTAATAAATATCAATTTAAAAAATTTTAAAAAAACAAAAAAACAAAAAAAAAAAACTAGTGTACAATTTCTTTCAAATTAACTTCTCTCCCATTTTTCAAGATATACCTTGATCATGATAATCTCTCTAGATATTGAAACTAAAAGTGATATATATATTCTTTTTATTTTCAAGATATTGTATTGAATAATAGCATAAAAGTTAAATTGTAATGGGTAGCAATTTTAAGAATAATTAACTAAGTGTATAGCAATACTTTAAAAAAATTGCTGATAAACTTTTATTATCTATCAATGATAGACCACCTAGACCATAAAAGTCGATTAGCGATAAAAGTCTATCACTAATAGATTTTGCTATATTTGCAATTTTTGTAAATGTTGCTATATATTCTAATACTTTGAATCTGGTTGTTATATTTGTCACTATTCCAAAGTAATATATATTTTTAGAAATGTTACTTTTTTTTTACAAATATAAGAACAAATTTTATTTTTATGATCCATTTATGCTATGTAAATAACTCTATTGTTTTTCAATGGAATGTGTAGAGGTAGCCAAGTTGAATGGAAACGAGTGGTACTTCTTCAGCTTTCGAGACCGAAAATACGCGACGGGTTTTCGAACCAATCGTGCAACGACAGCTGGGTATTGGAAGGCAACAGGGAAAGATAGATTGGTGATGGATCCAACAAGAGGAGAGGTTGTGGGAATGAGAAAAACTTTGGTGTTTTATAGAAACAGAGCTCCAAATGGGATCAAAACAGGATGGATCATGCATGAGTTTCGAATTGAAACTCCACATATGCCTCCAAAGGTTCCTATCGCTTTTTCCCTTCACTAATTTTTCTTAAATTGCCCTTTACGTAGAAATCTATTAGAATGTTAGACGAAAATTTAGATCTAAAACAGTATGTTGGTGACCTAGAATGAAAATTGAGAACCTAAATACCGTCATACTGATCTATATATGTCACCATCACACACACTCATTCTAGTTATCTATTTCCATCGAAAATTCTAATTGATTTCGGGCAATTTAAAAAATTTATGAAAGATATGGTAATATATAGCAACTTTTGAAAGAATATAGGATAGTCTTTATTAAACAAATGAGGGGTATTTTTTGTAATATAGTCTATAATTTATAATAAGGTGGTCGGAATGTCTAACACTTGAGCATAGCTTATTCAAAATGGCATTCCATTCTGTCAATTGCCTATTAGGGTTTCCATAAGGCACACTTTTTATTCTTTTATTTCATTTTATAGTATATAATTAACCTACCCTATACCTTAATCCCAACCTTGGCTCTAAGTTTTTTACATAGTTTATAATATATATTTGCAGCCTCAACCTTAACTACATGATCTTCATATAGTTTAAATGTTATTTTTATGTCTTCTATATATTTCATTCTTAACTTTCAACCCTAAATTTCAGTAATTTTTTTTTATCTTTTTAAATATGGGAATTCATTCATTATTTGTTATATGCTTTTATTCTTGTTTCCTCATCTTTGTTCTAATTTTAATCTCAGTAGCCCCCCAAACCTCAAACTCCTAAATTTTTAACTTAATTTATTTTGTAGATGGCCTATATTTCTCAGGGTAGTTGAAGTTTTACGAACAAATGAAGAGTATGAGAATTTGAACCTCAGACCTCAAGTAAATGAGAATAGTATAATTATGAGTAAATATAACTTTAAATTTTAAACAATGAATCATTTAATTGTATATCTAATTAAGTTATTATAAGAAACACTTACGAAAATGGGAAGTTTTTAAAAATGAAGAAATAAGGAAAACTATTTACACAAAATAGCAAAATTTTTAGATAGTTGTGATAGACTCTAATAGAAGTCTATTTCTTATAGATATTGATCATACATTTTTAACGTTTAAAGATGCAATTTTATGGATCATTGAAAGTTTTAGGGGTGTACTGACACTTTTTAAAGTTTAGAAATTTATCAAATAACTCTAAAAGAAAAAACACTTAAAAAAAAAGTACTAACGGGAAAAAACTAAAACAAAATAGAAGGGCTTTTGAAAGGAAAGTAAGTTGCATGAACTATTCAATTATAAAAGTGCCATGATAAAGATATTCTTTATACCCATCTACACAGGAGGATTGGGTTTTATGCAGAGTTTTTCACAAGAGCAAGCCAGATCAAGACATCACAGAACCAACAACACACACCACCTCACACTTTCCGACGTTCGATGCGGTGATGGCAGCGGCGGGATCATCCTCCTACCGCTCGCTGCCAAACCATGTTGAGTTTGTGCCCGGCGACGACTCGAACGGGCTGCTGCCATGGGACATCAACATGGAAGAAACAGCCTTCAGATCCTATGGAGTTGGTGATTCAACTTCACAGGAAATGAAGTATGAGATAATTGACAACACCATCCAAAATGCTTTCCCTTTTAATTATTTTGTTGCTTGAGAAGAGATTTTATATCAAAGGGTGGTTAATTACATATTTTCTTGTTGAATTATTT

mRNA sequence

AGAGAGTTGTAAGAAAAAAAAATGGGTTTGAGAGATATTGGAGCAACTCTTCCTCCTGGGTTTAGGTTTTATCCAAGTGATGAGGAGTTGGTTTGCCATTATTTGTATAAAAAGATTGCAAATGAAGAAGCTTTGAGGGGCACATTGGTGGAGATTGACTTGCATACTTGTGAGCCTTGGCAACTTCCTGAGGTAGCCAAGTTGAATGGAAACGAGTGGTACTTCTTCAGCTTTCGAGACCGAAAATACGCGACGGGTTTTCGAACCAATCGTGCAACGACAGCTGGGTATTGGAAGGCAACAGGGAAAGATAGATTGGTGATGGATCCAACAAGAGGAGAGGAGGATTGGGTTTTATGCAGAGTTTTTCACAAGAGCAAGCCAGATCAAGACATCACAGAACCAACAACACACACCACCTCACACTTTCCGACGTTCGATGCGGTGATGGCAGCGGCGGGATCATCCTCCTACCGCTCGCTGCCAAACCATGTTGAGTTTGTGCCCGGCGACGACTCGAACGGGCTGCTGCCATGGGACATCAACATGGAAGAAACAGCCTTCAGATCCTATGGAGTTGGTGATTCAACTTCACAGGAAATGAAGTATGAGATAATTGACAACACCATCCAAAATGCTTTCCCTTTTAATTATTTTGTTGCTTGAGAAGAGATTTTATATCAAAGGGTGGTTAATTACATATTTTCTTGTTGAATTATTT

Coding sequence (CDS)

ATGGGTTTGAGAGATATTGGAGCAACTCTTCCTCCTGGGTTTAGGTTTTATCCAAGTGATGAGGAGTTGGTTTGCCATTATTTGTATAAAAAGATTGCAAATGAAGAAGCTTTGAGGGGCACATTGGTGGAGATTGACTTGCATACTTGTGAGCCTTGGCAACTTCCTGAGGTAGCCAAGTTGAATGGAAACGAGTGGTACTTCTTCAGCTTTCGAGACCGAAAATACGCGACGGGTTTTCGAACCAATCGTGCAACGACAGCTGGGTATTGGAAGGCAACAGGGAAAGATAGATTGGTGATGGATCCAACAAGAGGAGAGGAGGATTGGGTTTTATGCAGAGTTTTTCACAAGAGCAAGCCAGATCAAGACATCACAGAACCAACAACACACACCACCTCACACTTTCCGACGTTCGATGCGGTGATGGCAGCGGCGGGATCATCCTCCTACCGCTCGCTGCCAAACCATGTTGAGTTTGTGCCCGGCGACGACTCGAACGGGCTGCTGCCATGGGACATCAACATGGAAGAAACAGCCTTCAGATCCTATGGAGTTGGTGATTCAACTTCACAGGAAATGAAGTATGAGATAATTGACAACACCATCCAAAATGCTTTCCCTTTTAATTATTTTGTTGCTTGA

Protein sequence

MGLRDIGATLPPGFRFYPSDEELVCHYLYKKIANEEALRGTLVEIDLHTCEPWQLPEVAKLNGNEWYFFSFRDRKYATGFRTNRATTAGYWKATGKDRLVMDPTRGEEDWVLCRVFHKSKPDQDITEPTTHTTSHFPTFDAVMAAAGSSSYRSLPNHVEFVPGDDSNGLLPWDINMEETAFRSYGVGDSTSQEMKYEIIDNTIQNAFPFNYFVA

Homology

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BLAST of Lsi02G021550 vs. Swiss-Prot
Match: NAC22_ARATH (NAC domain-containing protein 21/22 OS=Arabidopsis thaliana GN=NAC021 PE=1 SV=2)

HSP 1 Score: 137.5 bits (345), Expect = 1.7e-31
Identity = 68/158 (43.04%), Postives = 88/158 (55.70%), Query Frame = 1


Query: 6   IGATLPPGFRFYPSDEELVCHYLYKK-IANEEALRGTLVEIDLHTCEPWQLPEVAKLNGN 65
           + A LPPGFRF+P D+ELVC YL ++ + N       L+++DL+ CEPW +P++A + G 
Sbjct: 15  VEAKLPPGFRFHPKDDELVCDYLMRRSLHNNHRPPLVLIQVDLNKCEPWDIPKMACVGGK 74

Query: 66  EWYFFSFRDRKYATGFRTNRATTAGYWKATGKDRLVM-----------------DPTRG- 120
           +WYF+S RDRKYATG RTNRAT  GYWKATGKDR ++                    RG 
Sbjct: 75  DWYFYSQRDRKYATGLRTNRATATGYWKATGKDRTILRKGKLVGMRKTLVFYQGRAPRGR 134

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BLAST of Lsi02G021550 vs. Swiss-Prot
Match: NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.1e-30
Identity = 58/89 (65.17%), Postives = 68/89 (76.40%), Query Frame = 1


Query: 10  LPPGFRFYPSDEELVCHYLYKKIANEEALRGTLVEIDLHTCEPWQLPEVAKLNGNEWYFF 69
           LPPGFRF+P+DEEL+ HYL +K+ +       + E+DL+ CEPWQLP  AK+   EWYFF
Sbjct: 17  LPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMGEKEWYFF 76

Query: 70  SFRDRKYATGFRTNRATTAGYWKATGKDR 99
           S RDRKY TG RTNRAT AGYWKATGKDR
Sbjct: 77  SLRDRKYPTGLRTNRATEAGYWKATGKDR 105

[Close]

BLAST of Lsi02G021550 vs. Swiss-Prot
Match: NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.2e-30
Identity = 59/98 (60.20%), Postives = 72/98 (73.47%), Query Frame = 1


Query: 10  LPPGFRFYPSDEELVCHYLYKKIANEEALRGTLVEIDLHTCEPWQLPEVAKLNGNEWYFF 69
           LPPGFRF+P+DEEL+  YL  KI +       + E+DL+ CEPW+LPE+AK+   EWYF+
Sbjct: 22  LPPGFRFHPTDEELITFYLASKIFHGGLSGIHISEVDLNRCEPWELPEMAKMGEREWYFY 81

Query: 70  SFRDRKYATGFRTNRATTAGYWKATGKDRLVMDPTRGE 108
           S RDRKY TG RTNRATTAGYWKATGKD+ V     G+
Sbjct: 82  SLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQ 119

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BLAST of Lsi02G021550 vs. Swiss-Prot
Match: NC100_ARATH (NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.1e-29
Identity = 55/89 (61.80%), Postives = 68/89 (76.40%), Query Frame = 1


Query: 10  LPPGFRFYPSDEELVCHYLYKKIANEEALRGTLVEIDLHTCEPWQLPEVAKLNGNEWYFF 69
           LPPGFRF+P+DEEL+ HYL+KK+ +       + E+DL+  EPW+LP +AK+   EWYFF
Sbjct: 16  LPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMAKMGEKEWYFF 75

Query: 70  SFRDRKYATGFRTNRATTAGYWKATGKDR 99
             RDRKY TG RTNRAT AGYWKATGKD+
Sbjct: 76  CVRDRKYPTGLRTNRATEAGYWKATGKDK 104

[Close]

BLAST of Lsi02G021550 vs. Swiss-Prot
Match: NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.7e-29
Identity = 54/89 (60.67%), Postives = 68/89 (76.40%), Query Frame = 1


Query: 10  LPPGFRFYPSDEELVCHYLYKKIANEEALRGTLVEIDLHTCEPWQLPEVAKLNGNEWYFF 69
           +PPGFRF+P+DEEL+ +YL KK+ +       + ++DL+  EPW+LPE AK+   EWYFF
Sbjct: 20  MPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPEKAKMGEKEWYFF 79

Query: 70  SFRDRKYATGFRTNRATTAGYWKATGKDR 99
           + RDRKY TG RTNRAT AGYWKATGKDR
Sbjct: 80  TLRDRKYPTGLRTNRATEAGYWKATGKDR 108

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BLAST of Lsi02G021550 vs. TrEMBL
Match: A0A061DNM9_THECC (NAC domain protein, IPR003441 OS=Theobroma cacao GN=TCM_003998 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 6.1e-60
Identity = 137/270 (50.74%), Postives = 160/270 (59.26%), Query Frame = 1


Query: 1   MGLRDIGATLPPGFRFYPSDEELVCHYLYKKIANEEALRGTLVEIDLHTCEPWQLPEVAK 60
           MGLRDIGATLPPGFRFYPSDEELVCHYLYKKIANEE L+GTLVEIDLHTCEPWQLPEVAK
Sbjct: 1   MGLRDIGATLPPGFRFYPSDEELVCHYLYKKIANEEVLKGTLVEIDLHTCEPWQLPEVAK 60

Query: 61  LNGNEWYFFSFRDRKYATGFRTNRATTAGYWKATGKDRLVMDPTRGEED----------- 120
           LN NEWYFFSFRDRKYATGFRTNRATT+GYWKATGKDR V+DP   E             
Sbjct: 61  LNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVVDPRTQEVVGMRKTLVFYRN 120

Query: 121 ---------------------------WVLCRVFHKSKPDQD--ITEPTT-HTTSHFPTF 180
                                      WVLCRVFHKSK +    ++ P    T++H P+ 
Sbjct: 121 RAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKSKGENSSKLSPPMMFETSTHAPSL 180

Query: 181 -DAVMAAAGS--SSYRSLPNH--------------VEFVPGDDSNGL---------LPWD 204
            D  MA A    SS  + P H               E +  + +N +           WD
Sbjct: 181 TDQTMACAYQQISSLSTTPTHQSHGQSLLNLLQYSQEKINNNPANEVSSKVDDEYEFLWD 240

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BLAST of Lsi02G021550 vs. TrEMBL
Match: A0A0B0PUA0_GOSAR (NAC domain-containing 21/22-like protein OS=Gossypium arboreum GN=F383_06960 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 9.7e-58
Identity = 110/160 (68.75%), Postives = 117/160 (73.12%), Query Frame = 1


Query: 1   MGLRDIGATLPPGFRFYPSDEELVCHYLYKKIANEEALRGTLVEIDLHTCEPWQLPEVAK 60
           MGLRDIGATLPPGFRFYPSDEELVCHYLYKKIANE+ L+GTLVEIDLHTCEPWQLPEVAK
Sbjct: 1   MGLRDIGATLPPGFRFYPSDEELVCHYLYKKIANEQVLKGTLVEIDLHTCEPWQLPEVAK 60

Query: 61  LNGNEWYFFSFRDRKYATGFRTNRATTAGYWKATGKDRLVMDPTRGE------------- 120
           LN NEWYFFSFRDRKYATGFRTNRATT+GYWKATGKDR+V+DPT  E             
Sbjct: 61  LNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRMVLDPTTEEVVGMRKTLVFYRN 120

Query: 121 -------------------------EDWVLCRVFHKSKPD 123
                                    E+WVLCRVFHKSK +
Sbjct: 121 RAPNGIKTGWIMHEFRLHTPHLPPKEEWVLCRVFHKSKEE 160

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BLAST of Lsi02G021550 vs. TrEMBL
Match: M5W1G4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009628mg PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.2e-57
Identity = 132/283 (46.64%), Postives = 155/283 (54.77%), Query Frame = 1


Query: 1   MGLRDIGATLPPGFRFYPSDEELVCHYLYKKIANEEALRGTLVEIDLHTCEPWQLPEVAK 60
           MGLRDIGATLPPGFRFYPSDEELVCHYL+KKI NEEAL+GTLVEIDLH CEPWQLPEVAK
Sbjct: 1   MGLRDIGATLPPGFRFYPSDEELVCHYLFKKITNEEALKGTLVEIDLHICEPWQLPEVAK 60

Query: 61  LNGNEWYFFSFRDRKYATGFRTNRATTAGYWKATGKDRLVMDPTRGEED----------- 120
           LN NEWYFFSFRDRKYATGFRTNRATT+GYWKATGKDR+VM+P  GE             
Sbjct: 61  LNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRMVMEPGTGEIVGMRKTLVFYRN 120

Query: 121 ---------------------------WVLCRVFHKSKPDQ-------DITEPTTHTT-- 180
                                      WVLCRVFHK K ++       D    TT  T  
Sbjct: 121 RAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKGKGEENTKLSPHDFMLETTSCTIP 180

Query: 181 --------------------SHFPTFDAVMAAAGSSSYRSLPNHVEFVPGDDSNGLLP-- 204
                               +  P+F         +   SL N ++F     SN  +P  
Sbjct: 181 LSMEKYSSPPTQDQTMPRGYNQMPSFSTPPPRHSHNQSNSLLNLLQFPQEKYSNNSVPEL 240

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BLAST of Lsi02G021550 vs. TrEMBL
Match: A0A0D2SJY3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G147300 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.8e-57
Identity = 109/160 (68.12%), Postives = 116/160 (72.50%), Query Frame = 1


Query: 1   MGLRDIGATLPPGFRFYPSDEELVCHYLYKKIANEEALRGTLVEIDLHTCEPWQLPEVAK 60
           MGLRDIGATLPPGFRFYPSDEELVCHYLYKKIANE+ L+GTLVEIDLHTCEPWQLPE AK
Sbjct: 1   MGLRDIGATLPPGFRFYPSDEELVCHYLYKKIANEQVLKGTLVEIDLHTCEPWQLPEAAK 60

Query: 61  LNGNEWYFFSFRDRKYATGFRTNRATTAGYWKATGKDRLVMDPTRGE------------- 120
           LN NEWYFFSFRDRKYATGFRTNRATT+GYWKATGKDR+V+DPT  E             
Sbjct: 61  LNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRMVLDPTTEEVVGMRKTLVFYRN 120

Query: 121 -------------------------EDWVLCRVFHKSKPD 123
                                    E+WVLCRVFHKSK +
Sbjct: 121 RAPNGVKTGWIMHEFRLHTPHLPPKEEWVLCRVFHKSKEE 160

[Close]

BLAST of Lsi02G021550 vs. TrEMBL
Match: W6J8X8_GOSHI (NAC domain protein NAC40 OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.8e-57
Identity = 109/160 (68.12%), Postives = 116/160 (72.50%), Query Frame = 1


Query: 1   MGLRDIGATLPPGFRFYPSDEELVCHYLYKKIANEEALRGTLVEIDLHTCEPWQLPEVAK 60
           MGLRDIGATLPPGFRFYPSDEELVCHYLYKKIANE+ L+GTLVEIDLHTCEPWQLPE AK
Sbjct: 1   MGLRDIGATLPPGFRFYPSDEELVCHYLYKKIANEQVLKGTLVEIDLHTCEPWQLPEAAK 60

Query: 61  LNGNEWYFFSFRDRKYATGFRTNRATTAGYWKATGKDRLVMDPTRGE------------- 120
           LN NEWYFFSFRDRKYATGFRTNRATT+GYWKATGKDR+V+DPT  E             
Sbjct: 61  LNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRMVLDPTTEEVVGMRKTLVFYRN 120

Query: 121 -------------------------EDWVLCRVFHKSKPD 123
                                    E+WVLCRVFHKSK +
Sbjct: 121 RAPNGVKTGWIMHEFRLHTPHLPPKEEWVLCRVFHKSKEE 160

[Close]

BLAST of Lsi02G021550 vs. TAIR10
Match: AT4G28530.1 (AT4G28530.1 NAC domain containing protein 74)

HSP 1 Score: 177.6 bits (449), Expect = 8.4e-45
Identity = 83/119 (69.75%), Postives = 93/119 (78.15%), Query Frame = 1


Query: 1   MGLRDIGATLPPGFRFYPSDEELVCHYLYKKIAN--------------EEALRGT--LVE 60
           MGL+DIG+ LPPGFRF+PSDEELVCHYL  KI                +EAL+G+  LVE
Sbjct: 1   MGLKDIGSKLPPGFRFHPSDEELVCHYLCNKIRAKSDHGDVDDDDDDVDEALKGSTDLVE 60

Query: 61  IDLHTCEPWQLPEVAKLNGNEWYFFSFRDRKYATGFRTNRATTAGYWKATGKDRLVMDP 104
           IDLH CEPW+LP+VAKLN  EWYFFSFRDRKYATG+RTNRAT +GYWKATGKDR VMDP
Sbjct: 61  IDLHICEPWELPDVAKLNAKEWYFFSFRDRKYATGYRTNRATVSGYWKATGKDRTVMDP 119

[Close]

BLAST of Lsi02G021550 vs. TAIR10
Match: AT3G12977.1 (AT3G12977.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein)

HSP 1 Score: 146.7 bits (369), Expect = 1.6e-35
Identity = 74/193 (38.34%), Postives = 98/193 (50.78%), Query Frame = 1


Query: 6   IGATLPPGFRFYPSDEELVCHYLYKKIANEEALRGTLVEIDLHTCEPWQLPEVAKLNGNE 65
           + A LPPGFRF+P D+ELVC YL ++          L+++DL+ CEPW +P+ A++ G E
Sbjct: 14  VEANLPPGFRFHPRDDELVCDYLMRRTVRSLYQPVVLIDVDLNKCEPWDIPQTARVGGKE 73

Query: 66  WYFFSFRDRKYATGFRTNRATTAGYWKATGKDRLVM------------------------ 125
           WYF+S +DRKYATG+RTNRAT  GYWKATGKDR +                         
Sbjct: 74  WYFYSQKDRKYATGYRTNRATATGYWKATGKDRAIQRNGGLVGMRKTLVFYRGRSPKGRK 133

Query: 126 -----------------DPTRGEEDWVLCRVFHKSKPDQDITEPTTHTTSHFPTFDAVMA 158
                             P   EE+WVLCRVFHK+    DI + T   +          A
Sbjct: 134 TDWVMHEFRLQGKLLHHSPNSLEEEWVLCRVFHKNSNGADIDDITRSCSD-------ATA 193

[Close]

BLAST of Lsi02G021550 vs. TAIR10
Match: AT2G24430.1 (AT2G24430.1 NAC domain containing protein 38)

HSP 1 Score: 137.9 bits (346), Expect = 7.4e-33
Identity = 83/242 (34.30%), Postives = 124/242 (51.24%), Query Frame = 1


Query: 10  LPPGFRFYPSDEELVCHYLYKKIANEEALRGTLVEIDLHTCEPWQLPEVAKLNGNEWYFF 69
           LPPGFRF+P+DEEL+ +YL  KIA++      + ++DL+  EPW+LPE AK+ G EWYFF
Sbjct: 16  LPPGFRFHPTDEELISYYLVNKIADQNFTGKAIADVDLNKSEPWELPEKAKMGGKEWYFF 75

Query: 70  SFRDRKYATGFRTNRATTAGYWKATGKDRLVMDPT-------------------RGEED- 129
           S RDRKY TG RTNRAT  GYWK TGKD+ + + T                   RGE+  
Sbjct: 76  SLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSTTSELVGMKKTLVFYRGRAPRGEKTC 135

Query: 130 WVL---------------------CRVFHKSKPDQDITEPTTHTTSHF---PTFDAVMAA 189
           WV+                     CRVF K++  +     ++ +TSH     T  ++++ 
Sbjct: 136 WVMHEYRLHSKSSYRTSKQDEWVVCRVFKKTEATKKYISTSSSSTSHHHNNHTRASILST 195

Query: 190 AG-----SSSYRSLPNHVEFVPGDDSN-GLLPWDINMEETAFRSYGVGDSTSQEMKYEII 202
                  SS    LP H++  P  + N  L+   +++ E + R +    ST+ +  ++ +
Sbjct: 196 NNNNPNYSSDLLQLPPHLQPHPSLNINQSLMANAVHLAELS-RVFRASTSTTMDSSHQQL 255

[Close]

BLAST of Lsi02G021550 vs. TAIR10
Match: AT1G56010.2 (AT1G56010.2 NAC domain containing protein 1)

HSP 1 Score: 137.5 bits (345), Expect = 9.6e-33
Identity = 68/158 (43.04%), Postives = 88/158 (55.70%), Query Frame = 1


Query: 6   IGATLPPGFRFYPSDEELVCHYLYKK-IANEEALRGTLVEIDLHTCEPWQLPEVAKLNGN 65
           + A LPPGFRF+P D+ELVC YL ++ + N       L+++DL+ CEPW +P++A + G 
Sbjct: 15  VEAKLPPGFRFHPKDDELVCDYLMRRSLHNNHRPPLVLIQVDLNKCEPWDIPKMACVGGK 74

Query: 66  EWYFFSFRDRKYATGFRTNRATTAGYWKATGKDRLVM-----------------DPTRG- 120
           +WYF+S RDRKYATG RTNRAT  GYWKATGKDR ++                    RG 
Sbjct: 75  DWYFYSQRDRKYATGLRTNRATATGYWKATGKDRTILRKGKLVGMRKTLVFYQGRAPRGR 134

[Close]

BLAST of Lsi02G021550 vs. TAIR10
Match: AT5G53950.1 (AT5G53950.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein)

HSP 1 Score: 134.8 bits (338), Expect = 6.2e-32
Identity = 58/89 (65.17%), Postives = 68/89 (76.40%), Query Frame = 1


Query: 10  LPPGFRFYPSDEELVCHYLYKKIANEEALRGTLVEIDLHTCEPWQLPEVAKLNGNEWYFF 69
           LPPGFRF+P+DEEL+ HYL +K+ +       + E+DL+ CEPWQLP  AK+   EWYFF
Sbjct: 17  LPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMGEKEWYFF 76

Query: 70  SFRDRKYATGFRTNRATTAGYWKATGKDR 99
           S RDRKY TG RTNRAT AGYWKATGKDR
Sbjct: 77  SLRDRKYPTGLRTNRATEAGYWKATGKDR 105

[Close]

BLAST of Lsi02G021550 vs. NCBI nr
Match: gi|449463208|ref|XP_004149326.1| (PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Cucumis sativus])

HSP 1 Score: 357.5 bits (916), Expect = 1.7e-95
Identity = 184/257 (71.60%), Postives = 197/257 (76.65%), Query Frame = 1


Query: 1   MGLRDIGATLPPGFRFYPSDEELVCHYLYKKIANEEALRGTLVEIDLHTCEPWQLPEVAK 60
           MGL+DIGA+LPPGFRFYPSDEELVCHYLYKKI NEEAL+GTLVEIDLHTCEPWQLP+VAK
Sbjct: 1   MGLKDIGASLPPGFRFYPSDEELVCHYLYKKIGNEEALKGTLVEIDLHTCEPWQLPDVAK 60

Query: 61  LNGNEWYFFSFRDRKYATGFRTNRATTAGYWKATGKDRLVMDPTRGEED----------- 120
           LNGNEWYFFSFRDRKY+TGFRTNRATTAGYWKATGKDRLVMDPTR E             
Sbjct: 61  LNGNEWYFFSFRDRKYSTGFRTNRATTAGYWKATGKDRLVMDPTRKEIVGMRKTLVFYKN 120

Query: 121 ---------------------------WVLCRVFHKSKPDQDITEPTT-HTTSHFPTFDA 180
                                      WVLCRVFHK+KPDQD TE TT HTTSHFP  DA
Sbjct: 121 RAPNGIKTGWIMHEFRIETPHMPPKEDWVLCRVFHKTKPDQDATETTTKHTTSHFP-LDA 180

Query: 181 VMAAAGSSSYRSLPNH-VEFVPGDDSNGLLPWDINMEETAFR--SYGVGDSTSQEMKYEI 215
           VM A   SSY SLPN+ +EF+PGD+S GLLPWDIN+EET+F   SYGVGDS SQEMKY+I
Sbjct: 181 VMEA--PSSYYSLPNNDIEFLPGDNSTGLLPWDINLEETSFNSSSYGVGDSNSQEMKYDI 240

[Close]

BLAST of Lsi02G021550 vs. NCBI nr
Match: gi|659116504|ref|XP_008458103.1| (PREDICTED: NAC domain-containing protein 21/22-like [Cucumis melo])

HSP 1 Score: 349.7 bits (896), Expect = 3.5e-93
Identity = 182/257 (70.82%), Postives = 194/257 (75.49%), Query Frame = 1


Query: 1   MGLRDIGATLPPGFRFYPSDEELVCHYLYKKIANEEALRGTLVEIDLHTCEPWQLPEVAK 60
           MGLRDIGA+LPPGFRFYPSDEELVCHYLYKKI NEEALRGTLVEIDLHTCEPWQLPEVAK
Sbjct: 1   MGLRDIGASLPPGFRFYPSDEELVCHYLYKKIGNEEALRGTLVEIDLHTCEPWQLPEVAK 60

Query: 61  LNGNEWYFFSFRDRKYATGFRTNRATTAGYWKATGKDRLVMDPTRGEED----------- 120
           LNGNEWYFFSFRDRKY+TGFRTNRATTAGYWKATGKDR+VMDPT+ E             
Sbjct: 61  LNGNEWYFFSFRDRKYSTGFRTNRATTAGYWKATGKDRMVMDPTKKEIVGMRKTLVFYRN 120

Query: 121 ---------------------------WVLCRVFHKSKPDQDITEPTT--HTTSHFPTFD 180
                                      WVLCRVFHK+K DQD TE TT  HTTSHF TFD
Sbjct: 121 RAPNGIKTGWIMHEFRIETPHMPPKEDWVLCRVFHKTKSDQDTTETTTTKHTTSHF-TFD 180

Query: 181 AVMAAAGSSSYRSLPNHVEFVPGDDSNGLLPWDINMEETAFR--SYGVGDSTSQEMKYEI 215
           A+MA   SSSY  LPN+VEF+P  +SNGLLP DIN+EET+F   SYGVGDS S+EMKYEI
Sbjct: 181 AMMAE--SSSYYLLPNNVEFLPSYNSNGLLPLDINLEETSFNGSSYGVGDSNSEEMKYEI 240

[Close]

BLAST of Lsi02G021550 vs. NCBI nr
Match: gi|590715692|ref|XP_007050267.1| (NAC domain protein, IPR003441 [Theobroma cacao])

HSP 1 Score: 238.8 bits (608), Expect = 8.7e-60
Identity = 137/270 (50.74%), Postives = 160/270 (59.26%), Query Frame = 1


Query: 1   MGLRDIGATLPPGFRFYPSDEELVCHYLYKKIANEEALRGTLVEIDLHTCEPWQLPEVAK 60
           MGLRDIGATLPPGFRFYPSDEELVCHYLYKKIANEE L+GTLVEIDLHTCEPWQLPEVAK
Sbjct: 1   MGLRDIGATLPPGFRFYPSDEELVCHYLYKKIANEEVLKGTLVEIDLHTCEPWQLPEVAK 60

Query: 61  LNGNEWYFFSFRDRKYATGFRTNRATTAGYWKATGKDRLVMDPTRGEED----------- 120
           LN NEWYFFSFRDRKYATGFRTNRATT+GYWKATGKDR V+DP   E             
Sbjct: 61  LNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVVDPRTQEVVGMRKTLVFYRN 120

Query: 121 ---------------------------WVLCRVFHKSKPDQD--ITEPTT-HTTSHFPTF 180
                                      WVLCRVFHKSK +    ++ P    T++H P+ 
Sbjct: 121 RAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKSKGENSSKLSPPMMFETSTHAPSL 180

Query: 181 -DAVMAAAGS--SSYRSLPNH--------------VEFVPGDDSNGL---------LPWD 204
            D  MA A    SS  + P H               E +  + +N +           WD
Sbjct: 181 TDQTMACAYQQISSLSTTPTHQSHGQSLLNLLQYSQEKINNNPANEVSSKVDDEYEFLWD 240

[Close]

BLAST of Lsi02G021550 vs. NCBI nr
Match: gi|657981658|ref|XP_008382854.1| (PREDICTED: protein CUP-SHAPED COTYLEDON 3 [Malus domestica])

HSP 1 Score: 233.4 bits (594), Expect = 3.7e-58
Identity = 136/271 (50.18%), Postives = 162/271 (59.78%), Query Frame = 1


Query: 1   MGLRDIGATLPPGFRFYPSDEELVCHYLYKKIANEEALRGTLVEIDLHTCEPWQLPEVAK 60
           MGLRDIGATLPPGFRFYPSDEELVCHYLYKKI NEEAL+GTLVEIDLHTCEPWQLPEVAK
Sbjct: 1   MGLRDIGATLPPGFRFYPSDEELVCHYLYKKITNEEALKGTLVEIDLHTCEPWQLPEVAK 60

Query: 61  LNGNEWYFFSFRDRKYATGFRTNRATTAGYWKATGKDRLVMDPTRGEED----------- 120
           LN NEWYFFSFRDRKYATGFRTNRATT+GYWKATGKDR+VM+P  GE             
Sbjct: 61  LNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRMVMEPGTGEIVGMRKTLVFYRN 120

Query: 121 ---------------------------WVLCRVFHKSKPDQDITEPTTH-----TT---- 180
                                      WVLCRVFHK K  ++ T+ + H     TT    
Sbjct: 121 RAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKGKGPENSTKLSPHDFMLETTPCTV 180

Query: 181 ---------SHFPTFDAVMAAAGSSSYRSL--PNHVE-----FVP-----GDDSNGLLPW 204
                    +H  T   V     S+S+ +L   +H E      +P      D   G L W
Sbjct: 181 PLNLVPSPPTHGQTMPCVYNHNQSNSFLNLLQLSHQEKYTNSSIPELNAKNDCEYGFL-W 240

[Close]

BLAST of Lsi02G021550 vs. NCBI nr
Match: gi|728848571|gb|KHG28014.1| (NAC domain-containing 21/22 -like protein [Gossypium arboreum])

HSP 1 Score: 231.5 bits (589), Expect = 1.4e-57
Identity = 110/160 (68.75%), Postives = 117/160 (73.12%), Query Frame = 1


Query: 1   MGLRDIGATLPPGFRFYPSDEELVCHYLYKKIANEEALRGTLVEIDLHTCEPWQLPEVAK 60
           MGLRDIGATLPPGFRFYPSDEELVCHYLYKKIANE+ L+GTLVEIDLHTCEPWQLPEVAK
Sbjct: 1   MGLRDIGATLPPGFRFYPSDEELVCHYLYKKIANEQVLKGTLVEIDLHTCEPWQLPEVAK 60

Query: 61  LNGNEWYFFSFRDRKYATGFRTNRATTAGYWKATGKDRLVMDPTRGE------------- 120
           LN NEWYFFSFRDRKYATGFRTNRATT+GYWKATGKDR+V+DPT  E             
Sbjct: 61  LNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRMVLDPTTEEVVGMRKTLVFYRN 120

Query: 121 -------------------------EDWVLCRVFHKSKPD 123
                                    E+WVLCRVFHKSK +
Sbjct: 121 RAPNGIKTGWIMHEFRLHTPHLPPKEEWVLCRVFHKSKEE 160

The following BLAST results are available for this feature:

BLAST of Lsi02G021550 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NAC22_ARATH	1.7e-31	43.04	NAC domain-containing protein 21/22 OS=Arabidopsis thaliana GN=NAC021 PE=1 SV=2	[more]
NAC98_ARATH	1.1e-30	65.17	Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1	[more]
NAC31_ARATH	3.2e-30	60.20	Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=1 SV=1	[more]
NC100_ARATH	2.1e-29	61.80	NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1	[more]
NAC54_ARATH	2.7e-29	60.67	Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1	[more]

BLAST of Lsi02G021550 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A061DNM9_THECC	6.1e-60	50.74	NAC domain protein, IPR003441 OS=Theobroma cacao GN=TCM_003998 PE=4 SV=1	[more]
A0A0B0PUA0_GOSAR	9.7e-58	68.75	NAC domain-containing 21/22-like protein OS=Gossypium arboreum GN=F383_06960 PE=...	[more]
M5W1G4_PRUPE	2.2e-57	46.64	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009628mg PE=4 SV=1	[more]
A0A0D2SJY3_GOSRA	2.8e-57	68.13	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G147300 PE=4 SV=1	[more]
W6J8X8_GOSHI	2.8e-57	68.13	NAC domain protein NAC40 OS=Gossypium hirsutum PE=2 SV=1	[more]

BLAST of Lsi02G021550 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G28530.1	8.4e-45	69.75	NAC domain containing protein 74	[more]
AT3G12977.1	1.6e-35	38.34	NAC (No Apical Meristem) domain transcriptional regulator superfamil...	[more]
AT2G24430.1	7.4e-33	34.30	NAC domain containing protein 38	[more]
AT1G56010.2	9.6e-33	43.04	NAC domain containing protein 1	[more]
AT5G53950.1	6.2e-32	65.17	NAC (No Apical Meristem) domain transcriptional regulator superfamil...	[more]

BLAST of Lsi02G021550 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463208\|ref\|XP_004149326.1\|	1.7e-95	71.60	PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Cucumis sativus]	[more]
gi\|659116504\|ref\|XP_008458103.1\|	3.5e-93	70.82	PREDICTED: NAC domain-containing protein 21/22-like [Cucumis melo]	[more]
gi\|590715692\|ref\|XP_007050267.1\|	8.7e-60	50.74	NAC domain protein, IPR003441 [Theobroma cacao]	[more]
gi\|657981658\|ref\|XP_008382854.1\|	3.7e-58	50.18	PREDICTED: protein CUP-SHAPED COTYLEDON 3 [Malus domestica]	[more]
gi\|728848571\|gb\|KHG28014.1\|	1.4e-57	68.75	NAC domain-containing 21/22 -like protein [Gossypium arboreum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR003441	NAC-dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0008150	biological_process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G021550.1	Lsi02G021550.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 11..102 score: 4.8
IPR003441	NAC domain	PROFILE	PS51005	NAC	coord: 10..153 score: 32
IPR003441	NAC domain	unknown	SSF101941	NAC domain	coord: 8..118 score: 9.42
None	No IPR available	PANTHER	PTHR31744	FAMILY NOT NAMED	coord: 1..108 score: 4.8
None	No IPR available	PANTHER	PTHR31744:SF4	SUBFAMILY NOT NAMED	coord: 1..108 score: 4.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi02G021550	CSPI07G14990	Wild cucumber (PI 183967)	cpilsiB517
Lsi02G021550	CmaCh17G013050	Cucurbita maxima (Rimu)	cmalsiB346
Lsi02G021550	CmoCh17G012770	Cucurbita moschata (Rifu)	cmolsiB334
Lsi02G021550	Cla014880	Watermelon (97103) v1	lsiwmB175
Lsi02G021550	MELO3C021131	Melon (DHL92) v3.5.1	lsimeB187
Lsi02G021550	ClCG09G008300	Watermelon (Charleston Gray)	lsiwcgB159
Lsi02G021550	MELO3C021131.2	Melon (DHL92) v3.6.1	lsimedB197
Lsi02G021550	Cla97C09G170970	Watermelon (97103) v2	lsiwmbB212
Lsi02G021550	Bhi09G001030	Wax gourd	lsiwgoB281
Lsi02G021550	Cp4.1LG12g10750	Cucurbita pepo (Zucchini)	cpelsiB111
Lsi02G021550	CsGy7G013490	Cucumber (Gy14) v2	cgyblsiB472
Lsi02G021550	Carg11486	Silver-seed gourd	carlsiB012
Lsi02G021550	CsaV3_7G026760	Cucumber (Chinese Long) v3	cuclsiB538

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi02G021550	Silver-seed gourd	carlsiB074
Lsi02G021550	Cucumber (Gy14) v1	cgylsiB631
Lsi02G021550	Cucurbita maxima (Rimu)	cmalsiB822
Lsi02G021550	Cucurbita moschata (Rifu)	cmolsiB809
Lsi02G021550	Cucurbita pepo (Zucchini)	cpelsiB258
Lsi02G021550	Cucumber (Chinese Long) v2	culsiB503