Cucsa.387940 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.387940
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	NAC domain protein
Location	scaffold03967 : 314712 .. 315319 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGTAGCCAAGTTGAATGGAAATGAGTGGTACTTCTTCAGCTTTCGAGATAGAAAATACTCGACGGGTTTTCGAACCAATCGAGCAACAACAGCTGGCTACTGGAAGGCAACAGGAAAAGATAGATTGGTGATGGACCCAACAAGAAAAGAGATTGTAGGAATGAGAAAAACTTTGGTGTTTTATAAAAACAGAGCTCCAAATGGGATCAAAACAGGATGGATCATGCATGAGTTTCGAATTGAAACTCCACATATGCCCCCAAAGGTTCCTATCTCTCTTTTCCCCCTCATTATTAGTACTTTTTCTTGCCTACTTATTAGATTGTCTCCCACCATACTCACACAAGAAAGAGAAATGTTTAGAAACACTTCAACATCGGTTGGAGTTTTGGTTGAAAATCAAGATCTGAAATAGTATATGACAGTAGCTAGAATGAAAATTGGTACCCAAACACACACCATATTCTAGTTATCTATTTCCATCCAAAATATACTAATTGATTTCTACTTTAAGGGTAATTTGGAAAATTTATGGAAGAAAGAATATTACAGCATATTTAAACAAATGGAAAAATGTAGGGGTCGTCTTTCTCATAATATACAGTAA

mRNA sequence

ACGTAGCCAAGTTGAATGGAAATGAGTGGTACTTCTTCAGCTTTCGAGATAGAAAATACTCGACGGGTTTTCGAACCAATCGAGCAACAACAGCTGGCTACTGGAAGGCAACAGGAAAAGATAGATTGGTGATGGACCCAACAAGAAAAGAGATTGTAGGAATGAGAAAAACTTTGGTGTTTTATAAAAACAGAGCTCCAAATGGGATCAAAACAGGATGGATCATGCATGAGTTTCGAATTGAAACTCCACATATGCCCCCAAAGttatctatttccatccaaaatatactaattgatttctactttaagggtaatttggaaaatttatggaagaaagaatattacagcATATTTAAACAAATGGAAAAATGTAGGGGTCGTCTTTCTCATAATATACAGTAA

Coding sequence (CDS)

ACGTAGCCAAGTTGAATGGAAATGAGTGGTACTTCTTCAGCTTTCGAGATAGAAAATACTCGACGGGTTTTCGAACCAATCGAGCAACAACAGCTGGCTACTGGAAGGCAACAGGAAAAGATAGATTGGTGATGGACCCAACAAGAAAAGAGATTGTAGGAATGAGAAAAACTTTGGTGTTTTATAAAAACAGAGCTCCAAATGGGATCAAAACAGGATGGATCATGCATGAGTTTCGAATTGAAACTCCACATATGCCCCCAAAGTTATCTATTTCCATCCAAAATATACTAATTGATTTCTACTTTAAGGGTAATTTGGAAAATTTATGGAAGAAAGAATATTACAGCATATTTAAACAAATGGAAAAATGTAGGGGTCGTCTTTCTCATAATATACAGTAA

Protein sequence

VAKLNGNEWYFFSFRDRKYSTGFRTNRATTAGYWKATGKDRLVMDPTRKEIVGMRKTLVFYKNRAPNGIKTGWIMHEFRIETPHMPPKLSISIQNILIDFYFKGNLENLWKKEYYSIFKQMEKCRGRLSHNIQ*

Homology

[Close]

BLAST of Cucsa.387940 vs. Swiss-Prot
Match: NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.5e-28
Identity = 55/84 (65.48%), Postives = 66/84 (78.57%), Query Frame = 1


Query: 1   VAKLNGNEWYFFSFRDRKYSTGFRTNRATTAGYWKATGKDRLVMDPTRKEIVGMRKTLVF 60
           +AK+   EWYF+S RDRKY TG RTNRATTAGYWKATGKD+ V      ++VGM+KTLVF
Sbjct: 70  MAKMGEREWYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVF 129

Query: 61  YKNRAPNGIKTGWIMHEFRIETPH 85
           YK RAP G+KT W+MHE+R+E  H
Sbjct: 130 YKGRAPRGLKTKWVMHEYRLENDH 153

[Close]

BLAST of Cucsa.387940 vs. Swiss-Prot
Match: NAC22_ARATH (NAC domain-containing protein 21/22 OS=Arabidopsis thaliana GN=NAC021 PE=1 SV=2)

HSP 1 Score: 125.2 bits (313), Expect = 5.5e-28
Identity = 56/92 (60.87%), Postives = 71/92 (77.17%), Query Frame = 1


Query: 1   VAKLNGNEWYFFSFRDRKYSTGFRTNRATTAGYWKATGKDRLVMDPTRKEIVGMRKTLVF 60
           +A + G +WYF+S RDRKY+TG RTNRAT  GYWKATGKDR ++   + ++VGMRKTLVF
Sbjct: 68  MACVGGKDWYFYSQRDRKYATGLRTNRATATGYWKATGKDRTIL--RKGKLVGMRKTLVF 127

Query: 61  YKNRAPNGIKTGWIMHEFRIETPHMPPKLSIS 93
           Y+ RAP G KT W+MHEFR++  H PP  S+S
Sbjct: 128 YQGRAPRGRKTDWVMHEFRLQGSHHPPNHSLS 157

[Close]

BLAST of Cucsa.387940 vs. Swiss-Prot
Match: NAC59_ARATH (NAC domain-containing protein 59 OS=Arabidopsis thaliana GN=NAC59 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.4e-26
Identity = 57/94 (60.64%), Postives = 67/94 (71.28%), Query Frame = 1


Query: 2   AKLNGNEWYFFSFRDRKYSTGFRTNRATTAGYWKATGKDRLVMDPTRKEIVGMRKTLVFY 61
           AKL   EWYFF  RDRKY TG RTNRAT AGYWKATGKD+ +     K +VGM+KTLVFY
Sbjct: 73  AKLGEKEWYFFCVRDRKYPTGLRTNRATKAGYWKATGKDKEIF--KGKSLVGMKKTLVFY 132

Query: 62  KNRAPNGIKTGWIMHEFRIETPHMPPKLSISIQN 96
           K RAP G+KT W+MHE+R+E       LS + +N
Sbjct: 133 KGRAPKGVKTNWVMHEYRLEGKFAIDNLSKTAKN 164

[Close]

BLAST of Cucsa.387940 vs. Swiss-Prot
Match: NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.3e-26
Identity = 53/80 (66.25%), Postives = 61/80 (76.25%), Query Frame = 1


Query: 2   AKLNGNEWYFFSFRDRKYSTGFRTNRATTAGYWKATGKDRLVMDPTRKEIVGMRKTLVFY 61
           AK+   EWYFFS RDRKY TG RTNRAT AGYWKATGKDR +       +VGM+KTLVFY
Sbjct: 66  AKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFY 125

Query: 62  KNRAPNGIKTGWIMHEFRIE 82
           K RAP G K+ W+MHE+R+E
Sbjct: 126 KGRAPKGEKSNWVMHEYRLE 145

[Close]

BLAST of Cucsa.387940 vs. Swiss-Prot
Match: NAC76_ARATH (NAC domain-containing protein 76 OS=Arabidopsis thaliana GN=NAC076 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.0e-26
Identity = 53/81 (65.43%), Postives = 65/81 (80.25%), Query Frame = 1


Query: 7   NEWYFFSFRDRKYSTGFRTNRATTAGYWKATGKDRLVMDPTRKEIVGMRKTLVFYKNRAP 66
           NEWYFFS +D+KY TG RTNRAT AG+WKATG+D+ V D  + +++GMRKTLVFYK RAP
Sbjct: 67  NEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYD--KSKLIGMRKTLVFYKGRAP 126

Query: 67  NGIKTGWIMHEFRIETPHMPP 88
           NG KT WIMHE+R+E+    P
Sbjct: 127 NGQKTDWIMHEYRLESDENAP 145

[Close]

BLAST of Cucsa.387940 vs. TrEMBL
Match: A0A0M4G3S7_MANES (NAC transcription factors 94 OS=Manihot esculenta PE=2 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 6.1e-42
Identity = 79/88 (89.77%), Postives = 85/88 (96.59%), Query Frame = 1


Query: 1   VAKLNGNEWYFFSFRDRKYSTGFRTNRATTAGYWKATGKDRLVMDPTRKEIVGMRKTLVF 60
           VAKLN NEWYFFSFRDRKY+TGFRTNRATT+GYWKATGKDR V+DPT +EIVGMRKTLVF
Sbjct: 58  VAKLNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRAVLDPTTREIVGMRKTLVF 117

Query: 61  YKNRAPNGIKTGWIMHEFRIETPHMPPK 89
           Y+NRAPNGIKTGWIMHEFR+ETPHMPPK
Sbjct: 118 YRNRAPNGIKTGWIMHEFRLETPHMPPK 145

[Close]

BLAST of Cucsa.387940 vs. TrEMBL
Match: A0A0S3RY78_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G309800 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.4e-41
Identity = 78/88 (88.64%), Postives = 85/88 (96.59%), Query Frame = 1


Query: 1   VAKLNGNEWYFFSFRDRKYSTGFRTNRATTAGYWKATGKDRLVMDPTRKEIVGMRKTLVF 60
           VAKLN NEWYFFSFRDRKY+TGFRTNRATT+GYWKATGKDR V+DPT +E+VGMRKTLVF
Sbjct: 58  VAKLNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVVDPTTQEVVGMRKTLVF 117

Query: 61  YKNRAPNGIKTGWIMHEFRIETPHMPPK 89
           Y+NRAPNGIKTGWIMHEFR+ETPHMPPK
Sbjct: 118 YRNRAPNGIKTGWIMHEFRLETPHMPPK 145

[Close]

BLAST of Cucsa.387940 vs. TrEMBL
Match: V7D049_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G161700g PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.4e-41
Identity = 78/88 (88.64%), Postives = 85/88 (96.59%), Query Frame = 1


Query: 1   VAKLNGNEWYFFSFRDRKYSTGFRTNRATTAGYWKATGKDRLVMDPTRKEIVGMRKTLVF 60
           VAKLN NEWYFFSFRDRKY+TGFRTNRATT+GYWKATGKDR V+DPT +E+VGMRKTLVF
Sbjct: 58  VAKLNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVVDPTTQEVVGMRKTLVF 117

Query: 61  YKNRAPNGIKTGWIMHEFRIETPHMPPK 89
           Y+NRAPNGIKTGWIMHEFR+ETPHMPPK
Sbjct: 118 YRNRAPNGIKTGWIMHEFRLETPHMPPK 145

[Close]

BLAST of Cucsa.387940 vs. TrEMBL
Match: A0A151R4H4_CAJCA (NAC domain-containing protein 21/22 OS=Cajanus cajan GN=KK1_041302 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.4e-41
Identity = 84/115 (73.04%), Postives = 93/115 (80.87%), Query Frame = 1


Query: 1   VAKLNGNEWYFFSFRDRKYSTGFRTNRATTAGYWKATGKDRLVMDPTRKEIVGMRKTLVF 60
           VAKLN NEWYFFSFRDRKY+TGFRTNRATT+GYWKATGKDR VMDP  +E+VGMRKTLVF
Sbjct: 58  VAKLNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVMDPATQEVVGMRKTLVF 117

Query: 61  YKNRAPNGIKTGWIMHEFRIETPHMPPKLSISIQNILIDFYFKGNLENLWKKEYY 116
           Y+NRAPNGIKTGWIMHEFR+ETPHMPPK       +L   + K   EN  K+  Y
Sbjct: 118 YRNRAPNGIKTGWIMHEFRLETPHMPPKEDW----VLCRVFHKSKEENSSKQLMY 168

[Close]

BLAST of Cucsa.387940 vs. TrEMBL
Match: A0A151U4K8_CAJCA (Protein CUP-SHAPED COTYLEDON 3 OS=Cajanus cajan GN=KK1_006836 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.4e-41
Identity = 83/114 (72.81%), Postives = 92/114 (80.70%), Query Frame = 1


Query: 1   VAKLNGNEWYFFSFRDRKYSTGFRTNRATTAGYWKATGKDRLVMDPTRKEIVGMRKTLVF 60
           VAKLN NEWYFFSFRDRKY+TGFRTNRATT+GYWKATGKDR V DP  +E+VGMRKTLVF
Sbjct: 58  VAKLNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVFDPATREVVGMRKTLVF 117

Query: 61  YKNRAPNGIKTGWIMHEFRIETPHMPPKLSISIQNILIDFYFKGNLENLWKKEY 115
           Y+NRAPNGIKTGWIMHEFR+ETPHMPPK       +L   + KG  +N  K  Y
Sbjct: 118 YRNRAPNGIKTGWIMHEFRLETPHMPPKEDW----VLCRVFHKGKTDNSAKLMY 167

[Close]

BLAST of Cucsa.387940 vs. TAIR10
Match: AT4G28530.1 (AT4G28530.1 NAC domain containing protein 74)

HSP 1 Score: 163.3 bits (412), Expect = 1.0e-40
Identity = 77/123 (62.60%), Postives = 93/123 (75.61%), Query Frame = 1


Query: 1   VAKLNGNEWYFFSFRDRKYSTGFRTNRATTAGYWKATGKDRLVMDPTRKEIVGMRKTLVF 60
           VAKLN  EWYFFSFRDRKY+TG+RTNRAT +GYWKATGKDR VMDP  +++VGMRKTLVF
Sbjct: 74  VAKLNAKEWYFFSFRDRKYATGYRTNRATVSGYWKATGKDRTVMDPRTRQLVGMRKTLVF 133

Query: 61  YKNRAPNGIKTGWIMHEFRIETPHMPPKLSISIQNILIDFYFKGNLENLWKKEYYSIFKQ 120
           Y+NRAPNGIKT WIMHEFR+E P++PPK       +L   + KG   +L    YY+   Q
Sbjct: 134 YRNRAPNGIKTTWIMHEFRLECPNIPPKEDW----VLCRVFNKGRDSSLQDNNYYNNDNQ 192

Query: 121 MEK 124
            ++
Sbjct: 194 TQR 192

[Close]

BLAST of Cucsa.387940 vs. TAIR10
Match: AT1G76420.1 (AT1G76420.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein)

HSP 1 Score: 126.3 bits (316), Expect = 1.4e-29
Identity = 55/84 (65.48%), Postives = 66/84 (78.57%), Query Frame = 1


Query: 1   VAKLNGNEWYFFSFRDRKYSTGFRTNRATTAGYWKATGKDRLVMDPTRKEIVGMRKTLVF 60
           +AK+   EWYF+S RDRKY TG RTNRATTAGYWKATGKD+ V      ++VGM+KTLVF
Sbjct: 70  MAKMGEREWYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVF 129

Query: 61  YKNRAPNGIKTGWIMHEFRIETPH 85
           YK RAP G+KT W+MHE+R+E  H
Sbjct: 130 YKGRAPRGLKTKWVMHEYRLENDH 153

[Close]

BLAST of Cucsa.387940 vs. TAIR10
Match: AT1G56010.2 (AT1G56010.2 NAC domain containing protein 1)

HSP 1 Score: 125.2 bits (313), Expect = 3.1e-29
Identity = 56/92 (60.87%), Postives = 71/92 (77.17%), Query Frame = 1


Query: 1   VAKLNGNEWYFFSFRDRKYSTGFRTNRATTAGYWKATGKDRLVMDPTRKEIVGMRKTLVF 60
           +A + G +WYF+S RDRKY+TG RTNRAT  GYWKATGKDR ++   + ++VGMRKTLVF
Sbjct: 68  MACVGGKDWYFYSQRDRKYATGLRTNRATATGYWKATGKDRTIL--RKGKLVGMRKTLVF 127

Query: 61  YKNRAPNGIKTGWIMHEFRIETPHMPPKLSIS 93
           Y+ RAP G KT W+MHEFR++  H PP  S+S
Sbjct: 128 YQGRAPRGRKTDWVMHEFRLQGSHHPPNHSLS 157

[Close]

BLAST of Cucsa.387940 vs. TAIR10
Match: AT2G24430.1 (AT2G24430.1 NAC domain containing protein 38)

HSP 1 Score: 122.5 bits (306), Expect = 2.0e-28
Identity = 52/81 (64.20%), Postives = 63/81 (77.78%), Query Frame = 1


Query: 2   AKLNGNEWYFFSFRDRKYSTGFRTNRATTAGYWKATGKDRLVMDPTRKEIVGMRKTLVFY 61
           AK+ G EWYFFS RDRKY TG RTNRAT  GYWK TGKD+ + + T  E+VGM+KTLVFY
Sbjct: 65  AKMGGKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSTTSELVGMKKTLVFY 124

Query: 62  KNRAPNGIKTGWIMHEFRIET 83
           + RAP G KT W+MHE+R+ +
Sbjct: 125 RGRAPRGEKTCWVMHEYRLHS 145

[Close]

BLAST of Cucsa.387940 vs. TAIR10
Match: AT3G29035.1 (AT3G29035.1 NAC domain containing protein 3)

HSP 1 Score: 120.6 bits (301), Expect = 7.6e-28
Identity = 57/94 (60.64%), Postives = 67/94 (71.28%), Query Frame = 1


Query: 2   AKLNGNEWYFFSFRDRKYSTGFRTNRATTAGYWKATGKDRLVMDPTRKEIVGMRKTLVFY 61
           AKL   EWYFF  RDRKY TG RTNRAT AGYWKATGKD+ +     K +VGM+KTLVFY
Sbjct: 73  AKLGEKEWYFFCVRDRKYPTGLRTNRATKAGYWKATGKDKEIF--KGKSLVGMKKTLVFY 132

Query: 62  KNRAPNGIKTGWIMHEFRIETPHMPPKLSISIQN 96
           K RAP G+KT W+MHE+R+E       LS + +N
Sbjct: 133 KGRAPKGVKTNWVMHEYRLEGKFAIDNLSKTAKN 164

[Close]

BLAST of Cucsa.387940 vs. NCBI nr
Match: gi|449463208|ref|XP_004149326.1| (PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Cucumis sativus])

HSP 1 Score: 191.4 bits (485), Expect = 1.0e-45
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1


Query: 1   VAKLNGNEWYFFSFRDRKYSTGFRTNRATTAGYWKATGKDRLVMDPTRKEIVGMRKTLVF 60
           VAKLNGNEWYFFSFRDRKYSTGFRTNRATTAGYWKATGKDRLVMDPTRKEIVGMRKTLVF
Sbjct: 58  VAKLNGNEWYFFSFRDRKYSTGFRTNRATTAGYWKATGKDRLVMDPTRKEIVGMRKTLVF 117

Query: 61  YKNRAPNGIKTGWIMHEFRIETPHMPPK 89
           YKNRAPNGIKTGWIMHEFRIETPHMPPK
Sbjct: 118 YKNRAPNGIKTGWIMHEFRIETPHMPPK 145

[Close]

BLAST of Cucsa.387940 vs. NCBI nr
Match: gi|659116504|ref|XP_008458103.1| (PREDICTED: NAC domain-containing protein 21/22-like [Cucumis melo])

HSP 1 Score: 188.3 bits (477), Expect = 8.4e-45
Identity = 85/88 (96.59%), Postives = 88/88 (100.00%), Query Frame = 1


Query: 1   VAKLNGNEWYFFSFRDRKYSTGFRTNRATTAGYWKATGKDRLVMDPTRKEIVGMRKTLVF 60
           VAKLNGNEWYFFSFRDRKYSTGFRTNRATTAGYWKATGKDR+VMDPT+KEIVGMRKTLVF
Sbjct: 58  VAKLNGNEWYFFSFRDRKYSTGFRTNRATTAGYWKATGKDRMVMDPTKKEIVGMRKTLVF 117

Query: 61  YKNRAPNGIKTGWIMHEFRIETPHMPPK 89
           Y+NRAPNGIKTGWIMHEFRIETPHMPPK
Sbjct: 118 YRNRAPNGIKTGWIMHEFRIETPHMPPK 145

[Close]

BLAST of Cucsa.387940 vs. NCBI nr
Match: gi|925170309|gb|ALC79071.1| (NAC transcription factors 94 [Manihot esculenta])

HSP 1 Score: 178.3 bits (451), Expect = 8.7e-42
Identity = 79/88 (89.77%), Postives = 85/88 (96.59%), Query Frame = 1


Query: 1   VAKLNGNEWYFFSFRDRKYSTGFRTNRATTAGYWKATGKDRLVMDPTRKEIVGMRKTLVF 60
           VAKLN NEWYFFSFRDRKY+TGFRTNRATT+GYWKATGKDR V+DPT +EIVGMRKTLVF
Sbjct: 58  VAKLNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRAVLDPTTREIVGMRKTLVF 117

Query: 61  YKNRAPNGIKTGWIMHEFRIETPHMPPK 89
           Y+NRAPNGIKTGWIMHEFR+ETPHMPPK
Sbjct: 118 YRNRAPNGIKTGWIMHEFRLETPHMPPK 145

[Close]

BLAST of Cucsa.387940 vs. NCBI nr
Match: gi|1021479708|ref|XP_016183051.1| (PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Arachis ipaensis])

HSP 1 Score: 177.6 bits (449), Expect = 1.5e-41
Identity = 82/108 (75.93%), Postives = 91/108 (84.26%), Query Frame = 1


Query: 1   VAKLNGNEWYFFSFRDRKYSTGFRTNRATTAGYWKATGKDRLVMDPTRKEIVGMRKTLVF 60
           VAKLN NEWYFFSFRDRKY+TGFRTNRATT+GYWKATGKDR V+DP  +E+VGMRKTLVF
Sbjct: 58  VAKLNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVLDPLTREVVGMRKTLVF 117

Query: 61  YKNRAPNGIKTGWIMHEFRIETPHMPPKLSISIQNILIDFYFKGNLEN 109
           YKNRAPNGIKTGWIMHEFR+ETPHMPPK       +L   + KG  +N
Sbjct: 118 YKNRAPNGIKTGWIMHEFRLETPHMPPKEDW----VLCRVFHKGKTDN 161

[Close]

BLAST of Cucsa.387940 vs. NCBI nr
Match: gi|1012014691|ref|XP_015948742.1| (PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Arachis duranensis])

HSP 1 Score: 177.6 bits (449), Expect = 1.5e-41
Identity = 82/108 (75.93%), Postives = 91/108 (84.26%), Query Frame = 1


Query: 1   VAKLNGNEWYFFSFRDRKYSTGFRTNRATTAGYWKATGKDRLVMDPTRKEIVGMRKTLVF 60
           VAKLN NEWYFFSFRDRKY+TGFRTNRATT+GYWKATGKDR V+DP  +E+VGMRKTLVF
Sbjct: 58  VAKLNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVLDPLTREVVGMRKTLVF 117

Query: 61  YKNRAPNGIKTGWIMHEFRIETPHMPPKLSISIQNILIDFYFKGNLEN 109
           YKNRAPNGIKTGWIMHEFR+ETPHMPPK       +L   + KG  +N
Sbjct: 118 YKNRAPNGIKTGWIMHEFRLETPHMPPKEDW----VLCRVFHKGKTDN 161

The following BLAST results are available for this feature:

BLAST of Cucsa.387940 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NAC31_ARATH	2.5e-28	65.48	Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=1 SV=1	[more]
NAC22_ARATH	5.5e-28	60.87	NAC domain-containing protein 21/22 OS=Arabidopsis thaliana GN=NAC021 PE=1 SV=2	[more]
NAC59_ARATH	1.4e-26	60.64	NAC domain-containing protein 59 OS=Arabidopsis thaliana GN=NAC59 PE=1 SV=1	[more]
NAC98_ARATH	2.3e-26	66.25	Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1	[more]
NAC76_ARATH	3.0e-26	65.43	NAC domain-containing protein 76 OS=Arabidopsis thaliana GN=NAC076 PE=1 SV=1	[more]

BLAST of Cucsa.387940 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0M4G3S7_MANES	6.1e-42	89.77	NAC transcription factors 94 OS=Manihot esculenta PE=2 SV=1	[more]
A0A0S3RY78_PHAAN	1.4e-41	88.64	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G309800 PE=...	[more]
V7D049_PHAVU	1.4e-41	88.64	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G161700g PE=4 SV=1	[more]
A0A151R4H4_CAJCA	1.4e-41	73.04	NAC domain-containing protein 21/22 OS=Cajanus cajan GN=KK1_041302 PE=4 SV=1	[more]
A0A151U4K8_CAJCA	1.4e-41	72.81	Protein CUP-SHAPED COTYLEDON 3 OS=Cajanus cajan GN=KK1_006836 PE=4 SV=1	[more]

BLAST of Cucsa.387940 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G28530.1	1.0e-40	62.60	NAC domain containing protein 74	[more]
AT1G76420.1	1.4e-29	65.48	NAC (No Apical Meristem) domain transcriptional regulator superfamil...	[more]
AT1G56010.2	3.1e-29	60.87	NAC domain containing protein 1	[more]
AT2G24430.1	2.0e-28	64.20	NAC domain containing protein 38	[more]
AT3G29035.1	7.6e-28	60.64	NAC domain containing protein 3	[more]

BLAST of Cucsa.387940 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463208\|ref\|XP_004149326.1\|	1.0e-45	100.00	PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Cucumis sativus]	[more]
gi\|659116504\|ref\|XP_008458103.1\|	8.4e-45	96.59	PREDICTED: NAC domain-containing protein 21/22-like [Cucumis melo]	[more]
gi\|925170309\|gb\|ALC79071.1\|	8.7e-42	89.77	NAC transcription factors 94 [Manihot esculenta]	[more]
gi\|1021479708\|ref\|XP_016183051.1\|	1.5e-41	75.93	PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Arachis ipaensis]	[more]
gi\|1012014691\|ref\|XP_015948742.1\|	1.5e-41	75.93	PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Arachis duranensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003441	NAC-dom

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.387940.1	Cucsa.387940.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 9..80 score: 2.5
IPR003441	NAC domain	PROFILE	PS51005	NAC	coord: 1..103 score: 3
IPR003441	NAC domain	unknown	SSF101941	NAC domain	coord: 3..86 score: 1.02
None	No IPR available	PANTHER	PTHR31744	FAMILY NOT NAMED	coord: 1..84 score: 1.2
None	No IPR available	PANTHER	PTHR31744:SF4	SUBFAMILY NOT NAMED	coord: 1..84 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.387940	Cla014880	Watermelon (97103) v1	cgywmB702
Cucsa.387940	MELO3C021131	Melon (DHL92) v3.5.1	cgymeB637
Cucsa.387940	ClCG09G008300	Watermelon (Charleston Gray)	cgywcgB667
Cucsa.387940	CmaCh17G013050	Cucurbita maxima (Rimu)	cgycmaB1077
Cucsa.387940	CmoCh17G012770	Cucurbita moschata (Rifu)	cgycmoB1076
Cucsa.387940	Cp4.1LG12g10750	Cucurbita pepo (Zucchini)	cgycpeB1027
Cucsa.387940	MELO3C021131.2	Melon (DHL92) v3.6.1	cgymedB631
Cucsa.387940	CsaV3_7G026760	Cucumber (Chinese Long) v3	cgycucB590
Cucsa.387940	Cla97C09G170970	Watermelon (97103) v2	cgywmbB670
Cucsa.387940	Bhi09G001030	Wax gourd	cgywgoB778
Cucsa.387940	Carg11486	Silver-seed gourd	carcgyB0013

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.387940	Cucurbita maxima (Rimu)	cgycmaB1079
Cucsa.387940	Cucurbita moschata (Rifu)	cgycmoB1078
Cucsa.387940	Wild cucumber (PI 183967)	cgycpiB574
Cucsa.387940	Cucumber (Chinese Long) v2	cgycuB545
Cucsa.387940	Cucurbita pepo (Zucchini)	cgycpeB1030
Cucsa.387940	Bottle gourd (USVL1VR-Ls)	cgylsiB631
Cucsa.387940	Silver-seed gourd	carcgyB0104