Carg26370 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26370
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Geranylgeranyl pyrophosphate synthase
Location	Cucurbita_argyrosperma_scaffold_334 : 131777 .. 134012 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATTTTCGATCATGGCGGCATCCTCTCTCAGAATGAATTTTGGAACAAAGGCTTCAATTCGATGCTCTTCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGCGGTTTCTTCTCAAGCTAAATCGATTCAGTTTGATTTGAAAACGTACTGGAAAAAGCTGATTCTCGAGATCAACCAGAAGCTGGATGAAGCTGTTCCCATTCAGTACCCCGACCAGATCTACGAAGCTATGCGTTACTCGGTTTTGGCTGAAGGAGCCAAGCGAGCTCCTCCGGTTATGTGCGTCGCTGCCTGTGAGCTATTCGGCGTCGACCGCCTCGCTGCATTCCCTACCGCCTGTGCTCTCGAAATGGTTATTTCTCATTCCTAATTTTACGTTTCTGGATTGAGATTCGCTTTAATTCTCGTGTTCTGTTATTTATTGGGATATTGACGAAGTTTGACTACAAATTGCTCGAATCGAATATGCACTTGCGGTTATGATTTCATGTTTGTGTACATTATGTTTGCTAGTTTCTGTAATAGTTCTTTCAATCGTCAATAAGTGGTAAGTTACTGAAACAGGCTGTTCATATCAATCTCCAGATGTGAATTAAACTTGTATGTATGAACAGCCAAGTTGATTTGGGAATTAGGTTGGACAAACTCGAGGGATGGGGGGAGGGGGGCGCAACATTTTAGGCTATAAAATACTGTTCAGTTCGCAGTCTGTTACATTATGCATTCTGGTTTATAGGTCAATGATTCAATACGTTTCAAAACGTGAGTTGATTTGGGAATTACACTTGCTAGGCTCTAAATGAGTGAAGGGTCGGATGGATAAATGTGAGAGAACCCTTCAAAGGACTGTGGTTGATAGAGAATTTGATAGAAAACATAAGGCGTACTCTGCTTGGAAGTGATTTAGATTCGTCATATTCAACACTTCAAAATCAATTTTGATTGGATGAAAAATCTGTTTAAGAGTATGAAATCAAACGTCAAATTGTTTTTGAATAATTATAGGCATGTTTTGAGGTGATTTTGAACATGAAAAAGGTGATTCTAATCCTTTCAAAATCACTTCCAAACTTGTTAGTAGTGTTGGAACATATTCTGTTTTATATACACTTTTCGAGTTATGCTTTACTTGGTTATGTATGCTCTCTTACCTTATACTATATTTGTGCACTTCTCTTTTTCTCGGTTTGGTTAAGGCACGTGCTTTTAATTAAGACATCAGAGGTTTGAATCTCCCTTCATCTCTCCATGTTGTTGAACTATTAAAAAAAACACCCAAATCCGAATTATGTACCTCCCATCGAATGAAAAACAAGTTATGGTGAGATGCAATGTGAGATCTAACATTCAAGAGTAAAATTAATCACTTTTGAAGACTTTTGAAGACAGTTTTAGCGTTTTAAGAATTGAGAGAGCTTATTGACTCTTTGCGATATCAAAGTCGATGCGGATAACATCATTTCCTTTGTAACAATATACTGCATGTTGCTAGATTATTCTTAATAGCTCTTGTCACATTTCAAACTAGTGTATTAAATTGATCACTGATCTTTTGGCAGGTTCATGCAGCTTCATTGATCCACGATGACCTTCCTTGCATGGATGACGATCCCTCACGTCGTGGCCAACCTTCAAACCATACAGTTTATGGTGTTGACATGGCAATTCTCGCTGGTGATGCACTTTTTCCCCTTGGCTTTCAACACATTGTCTCACACACACCATTCGACCTCGTTCCCGAGTCCCGCTTGCTCCGTGTGGTTGCCGAGATTGCCAAAGCCGTTGGTTCCAGAGGCATGGCAGCAGGACAGTTTCTTGACCTCGAGGGAGGCCCCAACTCCATCGAATTTGTCCAAGAAAAGAAATTTGGTGAAATGAGCCAATGCTCCGCCGTGTGCGGAGGACTTCTAGCTGGAGCAGAAGACCATGAGGTACAGAGATTGAGAAGGTACGGAAGAGCGGTCGGCGTGTTGTATCAGGTAGTAGACGATATTCGGAAAGAACAAGCAAAGAAACTCGATCAAACCGATGAGAGTAAGAAGAGAAAAGGGAAGAGCTATGTTGGAGTATATGGGATTGAGAAGGCTAAGGAGGTGGCAGAGGAGCTGAGGACTAAAGCTAAGAAGGAATTGGAAGGATTTGAGAAGTATGGAGACCGAGTGATGCCTTTGTACAGCTTTGTGGATTATGCTGCAGATATGAGTTTCAGTTTAGAAAGTTCAACTTGA

mRNA sequence

ATGGCATTTTCGATCATGGCGGCATCCTCTCTCAGAATGAATTTTGGAACAAAGGCTTCAATTCGATGCTCTTCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGCGGTTTCTTCTCAAGCTAAATCGATTCAGTTTGATTTGAAAACGTACTGGAAAAAGCTGATTCTCGAGATCAACCAGAAGCTGGATGAAGCTGTTCCCATTCAGTACCCCGACCAGATCTACGAAGCTATGCGTTACTCGGTTTTGGCTGAAGGAGCCAAGCGAGCTCCTCCGGTTATGTGCGTCGCTGCCTGTGAGCTATTCGGCGTCGACCGCCTCGCTGCATTCCCTACCGCCTGTGCTCTCGAAATGGTTCATGCAGCTTCATTGATCCACGATGACCTTCCTTGCATGGATGACGATCCCTCACGTCGTGGCCAACCTTCAAACCATACAGTTTATGGTGTTGACATGGCAATTCTCGCTGGTGATGCACTTTTTCCCCTTGGCTTTCAACACATTGTCTCACACACACCATTCGACCTCGTTCCCGAGTCCCGCTTGCTCCGTGTGGTTGCCGAGATTGCCAAAGCCGTTGGTTCCAGAGGCATGGCAGCAGGACAGTTTCTTGACCTCGAGGGAGGCCCCAACTCCATCGAATTTGTCCAAGAAAAGAAATTTGGTGAAATGAGCCAATGCTCCGCCGTGTGCGGAGGACTTCTAGCTGGAGCAGAAGACCATGAGGTACAGAGATTGAGAAGGTACGGAAGAGCGGTCGGCGTGTTGTATCAGGTAGTAGACGATATTCGGAAAGAACAAGCAAAGAAACTCGATCAAACCGATGAGAGTAAGAAGAGAAAAGGGAAGAGCTATGTTGGAGTATATGGGATTGAGAAGGCTAAGGAGGTGGCAGAGGAGCTGAGGACTAAAGCTAAGAAGGAATTGGAAGGATTTGAGAAGTATGGAGACCGAGTGATGCCTTTGTACAGCTTTGTGGATTATGCTGCAGATATGAGTTTCAGTTTAGAAAGTTCAACTTGA

Coding sequence (CDS)

ATGGCATTTTCGATCATGGCGGCATCCTCTCTCAGAATGAATTTTGGAACAAAGGCTTCAATTCGATGCTCTTCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGCGGTTTCTTCTCAAGCTAAATCGATTCAGTTTGATTTGAAAACGTACTGGAAAAAGCTGATTCTCGAGATCAACCAGAAGCTGGATGAAGCTGTTCCCATTCAGTACCCCGACCAGATCTACGAAGCTATGCGTTACTCGGTTTTGGCTGAAGGAGCCAAGCGAGCTCCTCCGGTTATGTGCGTCGCTGCCTGTGAGCTATTCGGCGTCGACCGCCTCGCTGCATTCCCTACCGCCTGTGCTCTCGAAATGGTTCATGCAGCTTCATTGATCCACGATGACCTTCCTTGCATGGATGACGATCCCTCACGTCGTGGCCAACCTTCAAACCATACAGTTTATGGTGTTGACATGGCAATTCTCGCTGGTGATGCACTTTTTCCCCTTGGCTTTCAACACATTGTCTCACACACACCATTCGACCTCGTTCCCGAGTCCCGCTTGCTCCGTGTGGTTGCCGAGATTGCCAAAGCCGTTGGTTCCAGAGGCATGGCAGCAGGACAGTTTCTTGACCTCGAGGGAGGCCCCAACTCCATCGAATTTGTCCAAGAAAAGAAATTTGGTGAAATGAGCCAATGCTCCGCCGTGTGCGGAGGACTTCTAGCTGGAGCAGAAGACCATGAGGTACAGAGATTGAGAAGGTACGGAAGAGCGGTCGGCGTGTTGTATCAGGTAGTAGACGATATTCGGAAAGAACAAGCAAAGAAACTCGATCAAACCGATGAGAGTAAGAAGAGAAAAGGGAAGAGCTATGTTGGAGTATATGGGATTGAGAAGGCTAAGGAGGTGGCAGAGGAGCTGAGGACTAAAGCTAAGAAGGAATTGGAAGGATTTGAGAAGTATGGAGACCGAGTGATGCCTTTGTACAGCTTTGTGGATTATGCTGCAGATATGAGTTTCAGTTTAGAAAGTTCAACTTGA

Protein sequence

MAFSIMAASSLRMNFGTKASIRCSSSSSSSSSSSSSAVSSQAKSIQFDLKTYWKKLILEINQKLDEAVPIQYPDQIYEAMRYSVLAEGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIAKAVGSRGMAAGQFLDLEGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESKKRKGKSYVGVYGIEKAKEVAEELRTKAKKELEGFEKYGDRVMPLYSFVDYAADMSFSLESST

Homology

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BLAST of Carg26370 vs. NCBI nr
Match: XP_022928137.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic [Cucurbita moschata])

HSP 1 Score: 622.9 bits (1605), Expect = 6.7e-175
Identity = 337/342 (98.54%), Postives = 337/342 (98.54%), Query Frame = 0


Query: 1   MAFSIMAASSLRMNFGTKASIRCXXXXXXXXXXXXXXXXXXXKSIQFDLKTYWKKLILEI 60
           MAFSIMAASSLRMNFGTKASIRC   XXXXXXXXXXXXXXXXKSIQFDLKTYWKKLILEI
Sbjct: 32  MAFSIMAASSLRMNFGTKASIRC---XXXXXXXXXXXXXXXXKSIQFDLKTYWKKLILEI 91

Query: 61  NQKLDEAVPIQYPDQIYEAMRYSVLAEGAKRAPPVMCVAACELFGVDRLAAFPTACALEM 120
           NQKLDEAVPIQYPDQIYEAMRYSVLA GAKRAPPVMCVAACELFGVDRLAAFPTACALEM
Sbjct: 92  NQKLDEAVPIQYPDQIYEAMRYSVLANGAKRAPPVMCVAACELFGVDRLAAFPTACALEM 151

Query: 121 VHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVP 180
           VHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVP
Sbjct: 152 VHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVP 211

Query: 181 ESRLLRVVAEIAKAVGSRGMAAGQFLDLEGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGA 240
           ESRLLRVVAEIAKAVGSRGMAAGQFLDLEGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGA
Sbjct: 212 ESRLLRVVAEIAKAVGSRGMAAGQFLDLEGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGA 271

Query: 241 EDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESKKRKGKSYVGVYGIEKAKEVA 300
           EDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESKKRKGKSYVGVYGIEKAKEVA
Sbjct: 272 EDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESKKRKGKSYVGVYGIEKAKEVA 331

Query: 301 EELRTKAKKELEGFEKYGDRVMPLYSFVDYAADMSFSLESST 343
           EELRTKAKKELEGFEKYGDRVMPLYSFVDYAAD SFSLESST
Sbjct: 332 EELRTKAKKELEGFEKYGDRVMPLYSFVDYAADRSFSLESST 370

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BLAST of Carg26370 vs. NCBI nr
Match: XP_023529740.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 622.9 bits (1605), Expect = 6.7e-175
Identity = 333/342 (97.37%), Postives = 333/342 (97.37%), Query Frame = 0


Query: 1   MAFSIMAASSLRMNFGTKASIRCXXXXXXXXXXXXXXXXXXXKSIQFDLKTYWKKLILEI 60
           MAFSIMAASSLRMNFGTKASIRC      XXXXXXXXXXXX KSIQFDLKTYWKKLILEI
Sbjct: 32  MAFSIMAASSLRMNFGTKASIRC-----SXXXXXXXXXXXXAKSIQFDLKTYWKKLILEI 91

Query: 61  NQKLDEAVPIQYPDQIYEAMRYSVLAEGAKRAPPVMCVAACELFGVDRLAAFPTACALEM 120
           NQKLDEAVPIQYPDQIYEAMRYSVLA GAKRAPPVMCVAACELFGVDRLAAFPTACALEM
Sbjct: 92  NQKLDEAVPIQYPDQIYEAMRYSVLANGAKRAPPVMCVAACELFGVDRLAAFPTACALEM 151

Query: 121 VHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVP 180
           VHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVP
Sbjct: 152 VHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVP 211

Query: 181 ESRLLRVVAEIAKAVGSRGMAAGQFLDLEGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGA 240
           ESRLLRVVAEIAKAVGSRGMAAGQFLDLEGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGA
Sbjct: 212 ESRLLRVVAEIAKAVGSRGMAAGQFLDLEGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGA 271

Query: 241 EDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESKKRKGKSYVGVYGIEKAKEVA 300
           EDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESKKRKGKSYVGVYGIEKAKEVA
Sbjct: 272 EDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESKKRKGKSYVGVYGIEKAKEVA 331

Query: 301 EELRTKAKKELEGFEKYGDRVMPLYSFVDYAADMSFSLESST 343
           EELRTKAKKELEGFEKYGDRVMPLYSFVDYAAD SFSLESST
Sbjct: 332 EELRTKAKKELEGFEKYGDRVMPLYSFVDYAADRSFSLESST 368

[Close]

BLAST of Carg26370 vs. NCBI nr
Match: XP_022989428.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic [Cucurbita maxima])

HSP 1 Score: 619.8 bits (1597), Expect = 5.6e-174
Identity = 323/342 (94.44%), Postives = 323/342 (94.44%), Query Frame = 0


Query: 1   MAFSIMAASSLRMNFGTKASIRCXXXXXXXXXXXXXXXXXXXKSIQFDLKTYWKKLILEI 60
           MAFSIMAASSLRMNFGTKASIRC          XXX      KSI FDLKTYWKKLILEI
Sbjct: 32  MAFSIMAASSLRMNFGTKASIRC------SSSSXXXAVSSQAKSIHFDLKTYWKKLILEI 91

Query: 61  NQKLDEAVPIQYPDQIYEAMRYSVLAEGAKRAPPVMCVAACELFGVDRLAAFPTACALEM 120
           NQKLDEAVPIQYPDQIYEAMRYSVLAEGAKRAPPVMCVAACELFGVDRLAAFPTACALEM
Sbjct: 92  NQKLDEAVPIQYPDQIYEAMRYSVLAEGAKRAPPVMCVAACELFGVDRLAAFPTACALEM 151

Query: 121 VHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVP 180
           VHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVP
Sbjct: 152 VHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVP 211

Query: 181 ESRLLRVVAEIAKAVGSRGMAAGQFLDLEGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGA 240
           ESRLLRVVAEIAKAVGSRGMAAGQFLDLEGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGA
Sbjct: 212 ESRLLRVVAEIAKAVGSRGMAAGQFLDLEGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGA 271

Query: 241 EDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESKKRKGKSYVGVYGIEKAKEVA 300
           EDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESKKRKGKSYV VYGIEKAKEVA
Sbjct: 272 EDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESKKRKGKSYVRVYGIEKAKEVA 331

Query: 301 EELRTKAKKELEGFEKYGDRVMPLYSFVDYAADMSFSLESST 343
           EELRTKAKKELEGFEKYGDRVMPLYSFVDYAAD SFSLESST
Sbjct: 332 EELRTKAKKELEGFEKYGDRVMPLYSFVDYAADRSFSLESST 367

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BLAST of Carg26370 vs. NCBI nr
Match: XP_022136229.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Momordica charantia] >XP_022136230.1 heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Momordica charantia] >XP_022136231.1 heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Momordica charantia])

HSP 1 Score: 577.4 bits (1487), Expect = 3.2e-161
Identity = 292/342 (85.38%), Postives = 309/342 (90.35%), Query Frame = 0


Query: 1   MAFSIMAASSLRMNFGTKASIRCXXXXXXXXXXXXXXXXXXXKSIQFDLKTYWKKLILEI 60
           MAFSIMAASS+R++FG  A IRC                   KS+QFDLKTYWKKLI E 
Sbjct: 1   MAFSIMAASSIRVHFGRTAPIRC-------SSSSPSAVLTRAKSLQFDLKTYWKKLIFET 60

Query: 61  NQKLDEAVPIQYPDQIYEAMRYSVLAEGAKRAPPVMCVAACELFGVDRLAAFPTACALEM 120
           NQKLDEA+ +QYPD+IYEAMRYSVLAEGAKRAPPVMCVAACELFGVDRLAAFPTACALEM
Sbjct: 61  NQKLDEAILVQYPDEIYEAMRYSVLAEGAKRAPPVMCVAACELFGVDRLAAFPTACALEM 120

Query: 121 VHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVP 180
           VHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTP DLVP
Sbjct: 121 VHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPSDLVP 180

Query: 181 ESRLLRVVAEIAKAVGSRGMAAGQFLDLEGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGA 240
           ESRLLRVVAEIA+AVGSRGMAAGQFLDLEGGPNS+EFVQEKKFGEM QCSAVCGGLLAGA
Sbjct: 181 ESRLLRVVAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEMGQCSAVCGGLLAGA 240

Query: 241 EDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESKKRKGKSYVGVYGIEKAKEVA 300
           EDHEVQRLRRYGRAVGVLYQVVDDI +EQ K+LD TDES++RKGKSYVGVYGIEKAKEVA
Sbjct: 241 EDHEVQRLRRYGRAVGVLYQVVDDILEEQTKQLDATDESRRRKGKSYVGVYGIEKAKEVA 300

Query: 301 EELRTKAKKELEGFEKYGDRVMPLYSFVDYAADMSFSLESST 343
           EELR KAKKEL+GFEKYGDRV+PLYSFVDYAAD  FS+ESS+
Sbjct: 301 EELRNKAKKELDGFEKYGDRVVPLYSFVDYAADRGFSIESSS 335

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BLAST of Carg26370 vs. NCBI nr
Match: XP_008447910.1 (PREDICTED: LOW QUALITY PROTEIN: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic [Cucumis melo])

HSP 1 Score: 573.9 bits (1478), Expect = 3.5e-160
Identity = 292/342 (85.38%), Postives = 309/342 (90.35%), Query Frame = 0


Query: 1   MAFSIMAASSLRMNFGTKASIRCXXXXXXXXXXXXXXXXXXXKSIQFDLKTYWKKLILEI 60
           MAFS+MAASSL  +FG K  IRC                   KS+ FDLKTYWK+LILEI
Sbjct: 1   MAFSLMAASSLSTSFGRKTPIRC-------SSSSSSALSSQTKSLHFDLKTYWKQLILEI 60

Query: 61  NQKLDEAVPIQYPDQIYEAMRYSVLAEGAKRAPPVMCVAACELFGVDRLAAFPTACALEM 120
           NQKLDEAV IQYP+QIYEAMRYSVLA+GAKRAPPVMCVAACELFGVDRLAAFPTACALEM
Sbjct: 61  NQKLDEAVLIQYPEQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEM 120

Query: 121 VHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVP 180
           VH ASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVP
Sbjct: 121 VHEASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVP 180

Query: 181 ESRLLRVVAEIAKAVGSRGMAAGQFLDLEGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGA 240
           ESRLLRVVAEIA+AVGSRGMAAGQFLDLEGGPNS+EFVQ KKFGEM+QCSAVCGGLLAGA
Sbjct: 181 ESRLLRVVAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQXKKFGEMAQCSAVCGGLLAGA 240

Query: 241 EDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESKKRKGKSYVGVYGIEKAKEVA 300
           ED E+QRLRRYGRAVGVLYQVVDDI +EQ+KKLD+T+ESK+RKGKSYVGVYGIEKAKEVA
Sbjct: 241 EDPEIQRLRRYGRAVGVLYQVVDDILEEQSKKLDETNESKRRKGKSYVGVYGIEKAKEVA 300

Query: 301 EELRTKAKKELEGFEKYGDRVMPLYSFVDYAADMSFSLESST 343
           EELRTKAK ELEGFEKYGDRVMPLYSFVDYAAD SFS E+S+
Sbjct: 301 EELRTKAKNELEGFEKYGDRVMPLYSFVDYAADRSFSFETSS 335

[Close]

BLAST of Carg26370 vs. TAIR10
Match: AT4G38460.1 (geranylgeranyl reductase)

HSP 1 Score: 405.2 bits (1040), Expect = 4.0e-113
Identity = 211/299 (70.57%), Postives = 240/299 (80.27%), Query Frame = 0


Query: 44  SIQFDLKTYWKKLILEINQKLDEAVPIQYPDQIYEAMRYSVLAEGAKRAPPVMCVAACEL 103
           S+ FDL+TYW  LI EINQKLDEA+P+++P  IYEAMRYSVLA+GAKRAPPVMCVAACEL
Sbjct: 42  SLNFDLRTYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACEL 101

Query: 104 FGVDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALF 163
           FG DRLAAFPTACALEMVHAASLIHDDLPCMDDDP RRG+PSNHTVYG  MAILAGDALF
Sbjct: 102 FGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALF 161

Query: 164 PLGFQHIVSHTPFDLVPESRLLRVVAEIAKAVGSRGMAAGQFLDLEGGPNSIEFVQEKKF 223
           PL FQHIVSHTP DLVP + +LR++ EIA+ VGS GMAAGQ++DLEGGP  + FVQEKKF
Sbjct: 162 PLAFQHIVSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDLEGGPFPLSFVQEKKF 221

Query: 224 GEMSQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESKKRK 283
           G M +CSAVCGGLL GA + E+Q LRRYGRAVG+LYQVVDDI ++              K
Sbjct: 222 GAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDITED--------------K 281

Query: 284 GKSYVGVYGIEKA-KEVAEELRTKAKKELEGFE-KY--GDRVMPLYSFVDYAADMSFSL 339
            KSY G  G EK   E+AEEL+ KAKKEL+ F+ KY  GD ++PLY+FVDYAA   F L
Sbjct: 282 KKSYDG--GAEKGMMEMAEELKEKAKKELQVFDNKYGGGDTLVPLYTFVDYAAHRHFLL 324

[Close]

BLAST of Carg26370 vs. TAIR10
Match: AT4G36810.1 (geranylgeranyl pyrophosphate synthase 1)

HSP 1 Score: 249.2 bits (635), Expect = 3.6e-66
Identity = 137/304 (45.07%), Postives = 193/304 (63.49%), Query Frame = 0


Query: 47  FDLKTYWKKLILEINQKLDEAVPIQYPDQIYEAMRYSVLAEGAKRAPPVMCVAACELFGV 106
           FD  +Y       +N+ LD AVP++ P +I+EAMRYS+LA G KR  PV+C+AACEL G 
Sbjct: 74  FDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLA-GGKRVRPVLCIAACELVGG 133

Query: 107 DRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLG 166
           +   A P ACA+EM+H  SLIHDDLPCMD+D  RRG+P+NH V+G D+A+LAGDAL    
Sbjct: 134 EESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFA 193

Query: 167 FQHIVSHTPFDLVPESRLLRVVAEIAKAVGSRGMAAGQFLDL--EG------GPNSIEFV 226
           F+H+ S T  D+V   R++R V E+AKA+G+ G+ AGQ +D+  EG      G   +EF+
Sbjct: 194 FEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFI 253

Query: 227 QEKKFGEMSQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDE 286
              K   + + SAV G ++ G  D E++RLR++ R +G+L+QVVDDI       LD T  
Sbjct: 254 HLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDI-------LDVTKS 313

Query: 287 SK---KRKGK-------SYVGVYGIEKAKEVAEELRTKAKKELEGFEKYGDRVMPLYSFV 333
           SK   K  GK       +Y  + G+EK++E AE+L  +A+ +L GF+   D+V PL +  
Sbjct: 314 SKELGKTAGKDLIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFD--SDKVAPLLALA 367

[Close]

BLAST of Carg26370 vs. TAIR10
Match: AT3G29430.1 (Terpenoid synthases superfamily protein)

HSP 1 Score: 236.1 bits (601), Expect = 3.2e-62
Identity = 128/297 (43.10%), Postives = 188/297 (63.30%), Query Frame = 0


Query: 47  FDLKTYWKKLILEINQKLDEAVPIQYPDQIYEAMRYSVLAEGAKRAPPVMCVAACELFGV 106
           FD K+Y  +    ++  L+ +VP+Q P  I EA+RYS+LA G KR  P++C+AACEL G 
Sbjct: 61  FDFKSYMIRKAESVSAALNVSVPLQEPLTIQEAVRYSLLA-GGKRVRPLLCIAACELVGG 120

Query: 107 DRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLG 166
           D   A   ACA+EM+H +SLIHDDLPCMDD   RRG+P+NH  +G DMA+LAGDAL  L 
Sbjct: 121 DEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKEFGEDMAVLAGDALLALA 180

Query: 167 FQHIVSHTPFDLVPESRLLRVVAEIAKAVGSRGMAAGQFLDL--------EGGPNSIEFV 226
           F+H ++     LV   R++R V E+AKA+G++G+ AGQ  DL        + G   +EF+
Sbjct: 181 FEH-MTFVSNGLVAPERMIRAVMELAKAIGTKGLVAGQVTDLCSQGLNPDDVGLERLEFI 240

Query: 227 QEKKFGEMSQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQVVDDIR--KEQAKKLDQT 286
              K   + + +AV G ++ G  + E+++LR+Y R +G+L+QVVDDI    E  K+L +T
Sbjct: 241 HLHKTAALLEAAAVLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTKELGKT 300

Query: 287 DESKKRKGK-SYVGVYGIEKAKEVAEELRTKAKKELEGFEKYGDRVMPLYSFVDYAA 333
                  GK +Y  + G+E+++EVAE+LR +A ++L GF+   D+  PL +   Y A
Sbjct: 301 AGKDVMAGKLTYPRLIGLERSREVAEKLRREAAEQLLGFD--SDKAAPLVALASYIA 353

[Close]

BLAST of Carg26370 vs. TAIR10
Match: AT2G18620.1 (Terpenoid synthases superfamily protein)

HSP 1 Score: 235.0 bits (598), Expect = 7.1e-62
Identity = 129/304 (42.43%), Postives = 188/304 (61.84%), Query Frame = 0


Query: 47  FDLKTYWKKLILEINQKLDEAVPIQYPDQIYEAMRYSVLAEGAKRAPPVMCVAACELFGV 106
           FD  +Y       +N+ LD AV ++ P +I+EA+RYS+LA G KR  PV+C+AACEL G 
Sbjct: 53  FDFTSYMIGKANAVNEALDSAVSLREPIKIHEAIRYSLLARG-KRVRPVLCIAACELVGG 112

Query: 107 DRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLG 166
           +   A P ACA+EM+H  SLIHDDLPCMD+D  RRG+P+NH V+G D+A+LAGDAL    
Sbjct: 113 EESVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFA 172

Query: 167 FQHIVSHTPFDLVPESRLLRVVAEIAKAVGSRGMAAGQFLDLEGGP--------NSIEFV 226
           F+H+ + T    V  +R++R + E+AKA+GS+G+ AGQ +DL  G           +EF+
Sbjct: 173 FEHLATST---AVSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFI 232

Query: 227 QEKKFGEMSQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDE 286
              K   + + + V G ++ G  D EV++LRR+ R +G+L+QVVDDI       LD T  
Sbjct: 233 HVHKTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDI-------LDVTKS 292

Query: 287 SK---KRKGK-------SYVGVYGIEKAKEVAEELRTKAKKELEGFEKYGDRVMPLYSFV 333
           S+   K  GK       +Y  + G+EK+K+ A++L + A ++L GF+    RV PL +  
Sbjct: 293 SEELGKTAGKDLIADKLTYPKLMGLEKSKDFADKLLSDAHEQLHGFD--SSRVKPLLALA 343

[Close]

BLAST of Carg26370 vs. TAIR10
Match: AT3G32040.1 (Terpenoid synthases superfamily protein)

HSP 1 Score: 234.6 bits (597), Expect = 9.3e-62
Identity = 129/305 (42.30%), Postives = 191/305 (62.62%), Query Frame = 0


Query: 43  KSIQFDLKTYWKKLILEINQKLDEAVPIQYPDQIYEAMRYSVLAEGAKRAPPVMCVAACE 102
           ++  FD K+Y  +    ++  L+ +VP Q P  I EA+RYS+LA G KR  P++C+AACE
Sbjct: 60  RNFAFDFKSYMIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLA-GGKRVRPLLCIAACE 119

Query: 103 LFGVDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDAL 162
           L G D   A   ACA+EM+H +SLIHDDLPCMDD   RRG+P+NH V+G  MA+LAGDAL
Sbjct: 120 LVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGDAL 179

Query: 163 FPLGFQHIVSHTPFDLVPESRLLRVVAEIAKAVGSRGMAAGQFLDL--------EGGPNS 222
             L F+H+   +   + PE R++R V E+AKA+G++G+ AGQ  DL        + G   
Sbjct: 180 LALAFEHMTVVSSGLVAPE-RMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLER 239

Query: 223 IEFVQEKKFGEMSQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLD 282
           +EF+   K   + + +AV G ++ G  + E+Q+LR+YGR +G+L+QVVDDI        +
Sbjct: 240 LEFIHLHKTAALLEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDI----IDVTE 299

Query: 283 QTDESKKRKGK-------SYVGVYGIEKAKEVAEELRTKAKKELEGFEKYGDRVMPLYSF 333
            T+E  K  GK       +Y  + G+E+++EVAE+LR +A ++L GF+   ++V PL + 
Sbjct: 300 STEELGKTAGKDVMARKLTYPRLIGLERSREVAEKLRREAAEQLLGFD--SNKVAPLVAL 356

[Close]

BLAST of Carg26370 vs. Swiss-Prot
Match: sp|Q39108|GGR_ARATH (Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GGR PE=1 SV=2)

HSP 1 Score: 405.2 bits (1040), Expect = 7.1e-112
Identity = 211/299 (70.57%), Postives = 240/299 (80.27%), Query Frame = 0


Query: 44  SIQFDLKTYWKKLILEINQKLDEAVPIQYPDQIYEAMRYSVLAEGAKRAPPVMCVAACEL 103
           S+ FDL+TYW  LI EINQKLDEA+P+++P  IYEAMRYSVLA+GAKRAPPVMCVAACEL
Sbjct: 42  SLNFDLRTYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACEL 101

Query: 104 FGVDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALF 163
           FG DRLAAFPTACALEMVHAASLIHDDLPCMDDDP RRG+PSNHTVYG  MAILAGDALF
Sbjct: 102 FGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALF 161

Query: 164 PLGFQHIVSHTPFDLVPESRLLRVVAEIAKAVGSRGMAAGQFLDLEGGPNSIEFVQEKKF 223
           PL FQHIVSHTP DLVP + +LR++ EIA+ VGS GMAAGQ++DLEGGP  + FVQEKKF
Sbjct: 162 PLAFQHIVSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDLEGGPFPLSFVQEKKF 221

Query: 224 GEMSQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESKKRK 283
           G M +CSAVCGGLL GA + E+Q LRRYGRAVG+LYQVVDDI ++              K
Sbjct: 222 GAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDITED--------------K 281

Query: 284 GKSYVGVYGIEKA-KEVAEELRTKAKKELEGFE-KY--GDRVMPLYSFVDYAADMSFSL 339
            KSY G  G EK   E+AEEL+ KAKKEL+ F+ KY  GD ++PLY+FVDYAA   F L
Sbjct: 282 KKSYDG--GAEKGMMEMAEELKEKAKKELQVFDNKYGGGDTLVPLYTFVDYAAHRHFLL 324

[Close]

BLAST of Carg26370 vs. Swiss-Prot
Match: sp|P34802|GGPP1_ARATH (Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GGPPS1 PE=1 SV=2)

HSP 1 Score: 249.2 bits (635), Expect = 6.5e-65
Identity = 137/304 (45.07%), Postives = 193/304 (63.49%), Query Frame = 0


Query: 47  FDLKTYWKKLILEINQKLDEAVPIQYPDQIYEAMRYSVLAEGAKRAPPVMCVAACELFGV 106
           FD  +Y       +N+ LD AVP++ P +I+EAMRYS+LA G KR  PV+C+AACEL G 
Sbjct: 74  FDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLA-GGKRVRPVLCIAACELVGG 133

Query: 107 DRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLG 166
           +   A P ACA+EM+H  SLIHDDLPCMD+D  RRG+P+NH V+G D+A+LAGDAL    
Sbjct: 134 EESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFA 193

Query: 167 FQHIVSHTPFDLVPESRLLRVVAEIAKAVGSRGMAAGQFLDL--EG------GPNSIEFV 226
           F+H+ S T  D+V   R++R V E+AKA+G+ G+ AGQ +D+  EG      G   +EF+
Sbjct: 194 FEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFI 253

Query: 227 QEKKFGEMSQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDE 286
              K   + + SAV G ++ G  D E++RLR++ R +G+L+QVVDDI       LD T  
Sbjct: 254 HLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDI-------LDVTKS 313

Query: 287 SK---KRKGK-------SYVGVYGIEKAKEVAEELRTKAKKELEGFEKYGDRVMPLYSFV 333
           SK   K  GK       +Y  + G+EK++E AE+L  +A+ +L GF+   D+V PL +  
Sbjct: 314 SKELGKTAGKDLIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFD--SDKVAPLLALA 367

[Close]

BLAST of Carg26370 vs. Swiss-Prot
Match: sp|Q43133|GGPPS_SINAL (Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis alba OX=3728 GN=GGPS1 PE=1 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.1e-64
Identity = 136/305 (44.59%), Postives = 197/305 (64.59%), Query Frame = 0


Query: 47  FDLKTYWKKLILEINQKLDEAVPIQYPDQIYEAMRYSVLAEGAKRAPPVMCVAACELFGV 106
           FD  +Y  +    +N+ LD AVP++ P +I+EAMRYS+LA G KR  PV+C+AACEL G 
Sbjct: 70  FDFMSYIIRKADSVNKALDSAVPLREPLKIHEAMRYSLLA-GGKRVRPVLCIAACELVGG 129

Query: 107 DRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLG 166
           +   A P  CA+EM+H  SLIHDDLPCMD+D  RRG+P+NH VYG D+A+LAGDAL    
Sbjct: 130 EESLAMPARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFA 189

Query: 167 FQHIVSHTPFDLVPESRLLRVVAEIAKAVGSRGMAAGQFLDL--EG------GPNSIEFV 226
           F+H+ S T  ++ P +R++R V E+AKA+G+ G+ AGQ +D+  EG      G   ++F+
Sbjct: 190 FEHLASATSSEVSP-ARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHLKFI 249

Query: 227 QEKKFGEMSQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDE 286
              K   + + SAV GG++ G  D E++RLR++ R +G+L+QVVDDI       LD T  
Sbjct: 250 HLHKTAALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDI-------LDVTKS 309

Query: 287 SK---KRKGK-------SYVGVYGIEKAKEVAEELRTKAKKELEGFEKYGDRVMPLYSFV 334
           S+   K  GK       +Y  + G+EK++E AE+L T+A+ +L GF+   D+V PL +  
Sbjct: 310 SQELGKTAGKDLIADKLTYPKLMGLEKSREFAEKLNTEARDQLLGFD--SDKVAPLLALA 363

[Close]

BLAST of Carg26370 vs. Swiss-Prot
Match: sp|P80042|GGPPS_CAPAN (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Capsicum annuum OX=4072 GN=GGPS1 PE=3 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 2.6e-61
Identity = 133/302 (44.04%), Postives = 191/302 (63.25%), Query Frame = 0


Query: 47  FDLKTYWKKLILEINQKLDEAVPIQYPDQIYEAMRYSVLAEGAKRAPPVMCVAACELFGV 106
           F+ K Y  +  + +N+ LDEA+ ++ P  I+EAMRYS+LA G KR  P++C+AACEL G 
Sbjct: 76  FNFKIYVTEKAISVNKALDEAIIVKEPHVIHEAMRYSLLA-GGKRVRPMLCLAACELVGG 135

Query: 107 DRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLG 166
           ++  A   ACA+EM+H  SLIHDDLPCMD+D  RRG+P+NH +YG D+A+LAGD+L    
Sbjct: 136 NQENAMAAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDSLLAFA 195

Query: 167 FQHIVSHTPFDLVPESRLLRVVAEIAKAVGSRGMAAGQFLDLEGGPN------SIEFVQE 226
           F+HIV+ T    V  SR++  VAE+AK++G+ G+ AGQ  D++   N      ++EF+  
Sbjct: 196 FEHIVNSTAG--VTPSRIVGAVAELAKSIGTEGLVAGQVADIKCTGNASVSLETLEFIHV 255

Query: 227 KKFGEMSQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESK 286
            K   + + S V G +L G  + EV++LRR+ R +G+L+QVVDDI       LD T  S+
Sbjct: 256 HKTAALLESSVVLGAILGGGTNVEVEKLRRFARCIGLLFQVVDDI-------LDVTKSSE 315

Query: 287 ---KRKGK-------SYVGVYGIEKAKEVAEELRTKAKKELEGFEKYGDRVMPLYSFVDY 333
              K  GK       +Y  + G+EKAKE A EL  +AK++LEGF+    +  PL +  DY
Sbjct: 316 ELGKTAGKDLVVDKTTYPKLLGLEKAKEFAAELNREAKQQLEGFD--SRKAAPLIALADY 365

[Close]

BLAST of Carg26370 vs. Swiss-Prot
Match: sp|Q94ID7|GGPPS_HEVBR (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis OX=3981 GN=GGPS PE=1 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 4.4e-61
Identity = 132/302 (43.71%), Postives = 191/302 (63.25%), Query Frame = 0


Query: 47  FDLKTYWKKLILEINQKLDEAVPIQYPDQIYEAMRYSVLAEGAKRAPPVMCVAACELFGV 106
           FD K+Y  +    INQ L+ A+P+Q P +I+E+MRYS+LA G KR  P +C+AACEL G 
Sbjct: 77  FDFKSYMLQKGNSINQALEAAIPLQEPAKIHESMRYSLLA-GGKRVRPALCLAACELVGG 136

Query: 107 DRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLG 166
           +   A P ACA+EM+H  SLIHDDLPCMD+D  RRG+P+NH V+G D+A+LAGDAL    
Sbjct: 137 NDSMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLAFA 196

Query: 167 FQHIVSHTPFDLVPESRLLRVVAEIAKAVGSRGMAAGQFLDLEGGPNS------IEFVQE 226
           F+HI   T    V  +R++R V E+AKA+G+ G+ AGQ +D+    +S      +EF+  
Sbjct: 197 FEHIAVSTL--NVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEGSSEVDLEKLEFIHI 256

Query: 227 KKFGEMSQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESK 286
            K  ++ + + V G +L G  D EV++LR+Y R +G+L+QVVDDI       LD T  S+
Sbjct: 257 HKTAKLLEGAVVLGAILGGGTDEEVEKLRKYARDIGLLFQVVDDI-------LDVTKSSQ 316

Query: 287 ---KRKGK-------SYVGVYGIEKAKEVAEELRTKAKKELEGFEKYGDRVMPLYSFVDY 333
              K  GK       +Y  + GIEK++E AE+L  +A+++L GF+   ++  PL +  +Y
Sbjct: 317 ELGKTAGKDLVADKVTYPKLLGIEKSREFAEKLNKEAQEQLAGFDP--EKAAPLIALANY 366

[Close]

BLAST of Carg26370 vs. TrEMBL
Match: tr|A0A1S3BJF3|A0A1S3BJF3_CUCME (LOW QUALITY PROTEIN: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490255 PE=3 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 2.3e-160
Identity = 292/342 (85.38%), Postives = 309/342 (90.35%), Query Frame = 0


Query: 1   MAFSIMAASSLRMNFGTKASIRCXXXXXXXXXXXXXXXXXXXKSIQFDLKTYWKKLILEI 60
           MAFS+MAASSL  +FG K  IRC                   KS+ FDLKTYWK+LILEI
Sbjct: 1   MAFSLMAASSLSTSFGRKTPIRC-------SSSSSSALSSQTKSLHFDLKTYWKQLILEI 60

Query: 61  NQKLDEAVPIQYPDQIYEAMRYSVLAEGAKRAPPVMCVAACELFGVDRLAAFPTACALEM 120
           NQKLDEAV IQYP+QIYEAMRYSVLA+GAKRAPPVMCVAACELFGVDRLAAFPTACALEM
Sbjct: 61  NQKLDEAVLIQYPEQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEM 120

Query: 121 VHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVP 180
           VH ASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVP
Sbjct: 121 VHEASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVP 180

Query: 181 ESRLLRVVAEIAKAVGSRGMAAGQFLDLEGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGA 240
           ESRLLRVVAEIA+AVGSRGMAAGQFLDLEGGPNS+EFVQ KKFGEM+QCSAVCGGLLAGA
Sbjct: 181 ESRLLRVVAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQXKKFGEMAQCSAVCGGLLAGA 240

Query: 241 EDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESKKRKGKSYVGVYGIEKAKEVA 300
           ED E+QRLRRYGRAVGVLYQVVDDI +EQ+KKLD+T+ESK+RKGKSYVGVYGIEKAKEVA
Sbjct: 241 EDPEIQRLRRYGRAVGVLYQVVDDILEEQSKKLDETNESKRRKGKSYVGVYGIEKAKEVA 300

Query: 301 EELRTKAKKELEGFEKYGDRVMPLYSFVDYAADMSFSLESST 343
           EELRTKAK ELEGFEKYGDRVMPLYSFVDYAAD SFS E+S+
Sbjct: 301 EELRTKAKNELEGFEKYGDRVMPLYSFVDYAADRSFSFETSS 335

[Close]

BLAST of Carg26370 vs. TrEMBL
Match: tr|A0A0A0K0P7|A0A0A0K0P7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G017680 PE=3 SV=1)

HSP 1 Score: 572.8 bits (1475), Expect = 5.2e-160
Identity = 291/342 (85.09%), Postives = 307/342 (89.77%), Query Frame = 0


Query: 1   MAFSIMAASSLRMNFGTKASIRCXXXXXXXXXXXXXXXXXXXKSIQFDLKTYWKKLILEI 60
           MAFS+MAASSL  +F  K  IRC                   +SI FDLKTYWK+LILEI
Sbjct: 1   MAFSLMAASSLTTSFQRKTPIRC-------SSSSSPALSSQPQSIHFDLKTYWKQLILEI 60

Query: 61  NQKLDEAVPIQYPDQIYEAMRYSVLAEGAKRAPPVMCVAACELFGVDRLAAFPTACALEM 120
           NQKLDEAVP+QYPDQIYEAMRYSVLA+GAKRAPPVMCVAACELFGVDRLAAFPTACALEM
Sbjct: 61  NQKLDEAVPLQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEM 120

Query: 121 VHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVP 180
           VH ASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVP
Sbjct: 121 VHEASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVP 180

Query: 181 ESRLLRVVAEIAKAVGSRGMAAGQFLDLEGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGA 240
           ESRLLRVVAEIA+AVGSRGMAAGQFLDLEGGPNS+EFVQEKKFGEM+QCSAVCGGLLAGA
Sbjct: 181 ESRLLRVVAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEMAQCSAVCGGLLAGA 240

Query: 241 EDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESKKRKGKSYVGVYGIEKAKEVA 300
           EDHE+QRLRRYGRAVGVLYQVVDDI +EQ+KKLD TDESK+ KGKSYV VYGIEKAKEVA
Sbjct: 241 EDHEIQRLRRYGRAVGVLYQVVDDILEEQSKKLDYTDESKRSKGKSYVEVYGIEKAKEVA 300

Query: 301 EELRTKAKKELEGFEKYGDRVMPLYSFVDYAADMSFSLESST 343
           EELR KAK ELEGFEKYGD+VMPLYSFVDYAAD SFS E+S+
Sbjct: 301 EELRAKAKNELEGFEKYGDQVMPLYSFVDYAADRSFSFETSS 335

[Close]

BLAST of Carg26370 vs. TrEMBL
Match: tr|B9HR16|B9HR16_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_009G139600v3 PE=3 SV=2)

HSP 1 Score: 498.0 bits (1281), Expect = 1.6e-137
Identity = 245/300 (81.67%), Postives = 270/300 (90.00%), Query Frame = 0


Query: 43  KSIQFDLKTYWKKLILEINQKLDEAVPIQYPDQIYEAMRYSVLAEGAKRAPPVMCVAACE 102
           K+ QFDLKTYW  LILEINQKLD+AVPIQYPD+IYEAMRYSVLA+GAKRAPPVMCVAACE
Sbjct: 46  KTPQFDLKTYWTTLILEINQKLDQAVPIQYPDKIYEAMRYSVLAKGAKRAPPVMCVAACE 105

Query: 103 LFGVDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDAL 162
           LFG +R AAFPTACALEMVH+ASLIHDDLPCMDDDPSRRGQPSNH +YGVDMAILAGDAL
Sbjct: 106 LFGGNRHAAFPTACALEMVHSASLIHDDLPCMDDDPSRRGQPSNHKIYGVDMAILAGDAL 165

Query: 163 FPLGFQHIVSHTPFDLVPESRLLRVVAEIAKAVGSRGMAAGQFLDLEGGPNSIEFVQEKK 222
           FPLGF+HIVSHTP DLVPE RLL V+AEIA+AVGS GMAAGQFLDLEGGPNS+EFVQEKK
Sbjct: 166 FPLGFRHIVSHTPSDLVPEPRLLSVIAEIARAVGSTGMAAGQFLDLEGGPNSVEFVQEKK 225

Query: 223 FGEMSQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESKKR 282
           FGEM +CSAVCGGLLAGA+D E+QRLRRYGRAVGVLYQVVDDI + +  K    ++ KKR
Sbjct: 226 FGEMGECSAVCGGLLAGAKDDEIQRLRRYGRAVGVLYQVVDDILEAKTMKSKVDEDKKKR 285

Query: 283 KGKSYVGVYGIEKAKEVAEELRTKAKKELEGFEKYGDRVMPLYSFVDYAADMSFSLESST 342
           KGKSYV +YG+EKA EVAEELR KAK+EL+GFEKYG+ V+PLYSFVDYAAD  FS   S+
Sbjct: 286 KGKSYVALYGVEKAIEVAEELRAKAKEELDGFEKYGESVLPLYSFVDYAADRGFSFGESS 345

[Close]

BLAST of Carg26370 vs. TrEMBL
Match: tr|A0A2N9HI12|A0A2N9HI12_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39460 PE=3 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 4.8e-137
Identity = 242/299 (80.94%), Postives = 273/299 (91.30%), Query Frame = 0


Query: 44  SIQFDLKTYWKKLILEINQKLDEAVPIQYPDQIYEAMRYSVLAEGAKRAPPVMCVAACEL 103
           S QFDLKTYW  LI EINQKLDEA+P+QYP++IYEAMRYSVLA+ AKRAPPVMCVAACEL
Sbjct: 47  STQFDLKTYWMTLIGEINQKLDEAIPVQYPEKIYEAMRYSVLAKAAKRAPPVMCVAACEL 106

Query: 104 FGVDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALF 163
           FG +RLAAFPTACALEMVHAASLIHDDLPCMDDD SRRGQPSNHT+YGVDMAILAGDALF
Sbjct: 107 FGGNRLAAFPTACALEMVHAASLIHDDLPCMDDDQSRRGQPSNHTIYGVDMAILAGDALF 166

Query: 164 PLGFQHIVSHTPFDLVPESRLLRVVAEIAKAVGSRGMAAGQFLDLEGGPNSIEFVQEKKF 223
           PLGF+HIVSHTP DLVPE RLLRV+ EIA+AVGS GMAAGQFLDLEGGPNS+EFVQEKKF
Sbjct: 167 PLGFRHIVSHTPSDLVPEPRLLRVITEIARAVGSTGMAAGQFLDLEGGPNSVEFVQEKKF 226

Query: 224 GEMSQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESKKRK 283
           GEM +CSAVCGGLLAGAED E+QRLRRYGRAVGVLYQVVDD+ KE+ ++ ++ +E +K +
Sbjct: 227 GEMGECSAVCGGLLAGAEDDEIQRLRRYGRAVGVLYQVVDDVLKEKMRENEENEEIRK-Q 286

Query: 284 GKSYVGVYGIEKAKEVAEELRTKAKKELEGFEKYGDRVMPLYSFVDYAADMSFSLESST 343
           GKSYVG+YG+EKA EVAEELR KAKKEL+GFEKYG+ V+PLYSFVDYA D  FS++ ++
Sbjct: 287 GKSYVGLYGVEKALEVAEELRAKAKKELDGFEKYGESVVPLYSFVDYAVDRGFSVDGAS 344

[Close]

BLAST of Carg26370 vs. TrEMBL
Match: tr|B9SUY3|B9SUY3_RICCO (Geranyl geranyl pyrophosphate synthase, putative OS=Ricinus communis OX=3988 GN=RCOM_1373490 PE=3 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 5.3e-136
Identity = 239/296 (80.74%), Postives = 269/296 (90.88%), Query Frame = 0


Query: 43  KSIQFDLKTYWKKLILEINQKLDEAVPIQYPDQIYEAMRYSVLAEGAKRAPPVMCVAACE 102
           KS QFDLKTYW  LI EINQKLD+A+P+Q+P+QIYEAMRYS LA+GAKRAPPVMCVAACE
Sbjct: 48  KSTQFDLKTYWTTLIAEINQKLDQAIPVQFPEQIYEAMRYSALAKGAKRAPPVMCVAACE 107

Query: 103 LFGVDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDAL 162
           LFG +RLAAFPTACALEMVH ASLIHDDLPCMDDDPSRRGQPSNHT+YGVDMAILAGDAL
Sbjct: 108 LFGGNRLAAFPTACALEMVHTASLIHDDLPCMDDDPSRRGQPSNHTIYGVDMAILAGDAL 167

Query: 163 FPLGFQHIVSHTPFDLVPESRLLRVVAEIAKAVGSRGMAAGQFLDLEGGPNSIEFVQEKK 222
           FPLG++HIVSHTP  LVPE RLLRV+AEIA+AVGS GMAAGQFLDLEGGP+ +EF QEKK
Sbjct: 168 FPLGYRHIVSHTPTGLVPEPRLLRVIAEIARAVGSTGMAAGQFLDLEGGPSFVEFAQEKK 227

Query: 223 FGEMSQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESKKR 282
           +GEMS+CSAVCGGLLAGAED E+QRLRRYGRAVGVLYQV+DD+   +AK +++ +E K+R
Sbjct: 228 YGEMSECSAVCGGLLAGAEDDEIQRLRRYGRAVGVLYQVIDDVL--EAKAMNKENEEKRR 287

Query: 283 KGKSYVGVYGIEKAKEVAEELRTKAKKELEGFEKYGDRVMPLYSFVDYAADMSFSL 339
            GKSYV +YGIEKA EVAEELRT+AKKEL+GF KYGD VMPLYSFVDYAAD  F++
Sbjct: 288 NGKSYVSLYGIEKAMEVAEELRTQAKKELDGFAKYGDSVMPLYSFVDYAADRGFTI 341

The following BLAST results are available for this feature:

BLAST of Carg26370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928137.1	6.7e-175	98.54	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
XP_023529740.1	6.7e-175	97.37	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
XP_022989428.1	5.6e-174	94.44	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
XP_022136229.1	3.2e-161	85.38	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
XP_008447910.1	3.5e-160	85.38	PREDICTED: LOW QUALITY PROTEIN: heterodimeric geranylgeranyl pyrophosphate synth...	[more]

BLAST of Carg26370 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38460.1	4.0e-113	70.57	geranylgeranyl reductase	[more]
AT4G36810.1	3.6e-66	45.07	geranylgeranyl pyrophosphate synthase 1	[more]
AT3G29430.1	3.2e-62	43.10	Terpenoid synthases superfamily protein	[more]
AT2G18620.1	7.1e-62	42.43	Terpenoid synthases superfamily protein	[more]
AT3G32040.1	9.3e-62	42.30	Terpenoid synthases superfamily protein	[more]

BLAST of Carg26370 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q39108\|GGR_ARATH	7.1e-112	70.57	Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
sp\|P34802\|GGPP1_ARATH	6.5e-65	45.07	Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplast...	[more]
sp\|Q43133\|GGPPS_SINAL	1.1e-64	44.59	Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis al...	[more]
sp\|P80042\|GGPPS_CAPAN	2.6e-61	44.04	Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Capsicum annuum OX=4072 ...	[more]
sp\|Q94ID7\|GGPPS_HEVBR	4.4e-61	43.71	Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis OX=39...	[more]

BLAST of Carg26370 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BJF3\|A0A1S3BJF3_CUCME	2.3e-160	85.38	LOW QUALITY PROTEIN: heterodimeric geranylgeranyl pyrophosphate synthase small s...	[more]
tr\|A0A0A0K0P7\|A0A0A0K0P7_CUCSA	5.2e-160	85.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G017680 PE=3 SV=1	[more]
tr\|B9HR16\|B9HR16_POPTR	1.6e-137	81.67	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_009G139600v3 PE=...	[more]
tr\|A0A2N9HI12\|A0A2N9HI12_FAGSY	4.8e-137	80.94	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39460 PE=3 SV=1	[more]
tr\|B9SUY3\|B9SUY3_RICCO	5.3e-136	80.74	Geranyl geranyl pyrophosphate synthase, putative OS=Ricinus communis OX=3988 GN=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0008299	isoprenoid biosynthetic process

Vocabulary: **INTERPRO**
Term	Definition
IPR033749	Polyprenyl_synt_CS
IPR008949	Isoprenoid_synthase_dom_sf
IPR000092	Polyprenyl_synt

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008299	isoprenoid biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26370-RA	Carg26370-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 293..313
None	No IPR available	SFLD	SFLDS00005	Isoprenoid_Synthase_Type_I	coord: 77..319 e-value: 5.101E-43 score: 142.2
None	No IPR available	PANTHER	PTHR43281	FAMILY NOT NAMED	coord: 3..341
None	No IPR available	PANTHER	PTHR43281:SF5	HETERODIMERIC GERANYLGERANYL PYROPHOSPHATE SYNTHASE SMALL SUBUNIT, CHLOROPLASTIC	coord: 3..341
None	No IPR available	CDD	cd00685	Trans_IPPS_HT	coord: 73..314 e-value: 1.02049E-58 score: 191.225
IPR000092	Polyprenyl synthetase	PFAM	PF00348	polyprenyl_synt	coord: 75..267 e-value: 2.3E-32 score: 112.0
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	G3DSA:1.10.600.10		coord: 38..335 e-value: 1.0E-84 score: 286.0
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	SSF48576	Terpenoid synthases	coord: 50..315
IPR033749	Polyprenyl synthetase, conserved site	PROSITE	PS00723	POLYPRENYL_SYNTHASE_1	coord: 126..142

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg26370	Cla015797	Watermelon (97103) v1	carwmB1048
Carg26370	Csa7G017680	Cucumber (Chinese Long) v2	carcuB1063
Carg26370	MELO3C013320	Melon (DHL92) v3.5.1	carmeB1016
Carg26370	ClCG02G003810	Watermelon (Charleston Gray)	carwcgB1020
Carg26370	CSPI07G01280	Wild cucumber (PI 183967)	carcpiB1084
Carg26370	Cucsa.099150	Cucumber (Gy14) v1	carcgyB1163
Carg26370	CmaCh11G013580	Cucurbita maxima (Rimu)	carcmaB1451
Carg26370	CmoCh11G017600	Cucurbita moschata (Rifu)	carcmoB1405
Carg26370	Lsi11G012280	Bottle gourd (USVL1VR-Ls)	carlsiB956
Carg26370	Cp4.1LG04g04630	Cucurbita pepo (Zucchini)	carcpeB1460
Carg26370	CsGy7G001100	Cucumber (Gy14) v2	carcgybB1032
Carg26370	MELO3C013320.2	Melon (DHL92) v3.6.1	carmedB1028
Carg26370	CsaV3_7G001340	Cucumber (Chinese Long) v3	carcucB1096
Carg26370	Cla97C02G030600	Watermelon (97103) v2	carwmbB1106
Carg26370	Bhi05G001441	Wax gourd	carwgoB1229

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg26370	Silver-seed gourd	carcarB652
Carg26370	Cucurbita maxima (Rimu)	carcmaB1452
Carg26370	Cucurbita moschata (Rifu)	carcmoB1406
Carg26370	Cucurbita pepo (Zucchini)	carcpeB1459