Cla015797 (gene) Watermelon (97103) v1

Overview
NameCla015797
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionGeranylgeranyl pyrophosphate synthase 4 (AHRD V1 ***- F1C935_SOLPN); contains Interpro domain(s) IPR000092 Polyprenyl synthetase
LocationChr2 : 3619050 .. 3621286 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTTTTCACTCATGGCGGCATCCTCTCTTAGTATGCATTTTGGAAGAAAGACTCCAATTCGATGTTCTTCCTCTTCTTCCTCAGCTGTTTCTTCTCAAGCCAAATCGATTCAGTTTGACCTCAAAACGTACTGGAAACAGCTGATTATCGAGATCAACCAGAAGTTGGATGAAGCTGTTCCAATTCAGTACCCCGACCAGATCTACGAGGCTATGCGTTACTCCGTCTTGGCTCAAGGGGCCAAGCGAGCTCCTCCGGTTATGTGTGTCGCCGCCTGCGAGCTCTTCGGCGTCGACCGCCTCGCCGCTTTCCCCACCGCCTGTGCCCTCGAAATGGTTCTTTCTCTTATCTAATTTTACGTTTCTGGGTTGAGAGTTGCTTGAATTCTCGTGTTCTGTTATTTCTTGGGATGCAACTCTAATTTGATTTTGAATTGATCAATTCGAATACTCACTTGCGATTATAATTTCCTGGTTGTATGTGTCATACTTGCAATTTTCTGTAATAGTTCTCTCAATCGTCTCTAATTGTGAAGTTACTTAAGCAAGGCTGTTCAATTCAATCCCTAGCTAAAAATTATAATTAGGTAGGACAAACCCGAGGGATGAGTGGGGGGCAATTCACACAATCTTTTACATTATAGATTCTGGTTCTCAGAGTCAGCGATTCAATACGTTTCAAATTGTGAGAGAACCCTTAAAAGGAGTGTTGCGGGTAGAGAGTTTGATAGAAGATGTAGTGCTGAATATTTCTTGTGTTCTATACTCTTGTCCTAGTTGTGCTTTACTTGGTTATATTCGCTCTAGTTAAATCACCAACAGCCCAAAGGTTTAAGCGGATGAGTTACAATAAATTTTATTATATCAAATACTTCAACAACTCTTATCTGATATCTATATCTATATATATTATTTTTAGAAATACTTGGTGCATTCCAAGATACACTTATCTCTATACATCCCTCTCTCATCACATACACAAAAAGAATTAAAGTATTTAAAGAAAAATTTGCCACGTGGCAAGCTATGATTGGATGATTTGTTGGGATGCACAAAAATGGATGTAGCTTGAGATGCACCTAAGTATTTTTCTATAGTTTTTTGGATCGAAATCTGATATCTGTACTCGTGTGTACTTCTCTTTACTTGTGTTTGAGTACTTAGTAAATAGCCATCCTCAACTAGTCCTTACACCGAGCGCATCTGCTTCATTTTATATTTTGTCCGTCTCTTTATTTCTTTTTACCTGTTTTTACAAGTCCATTAATCTCTTGAACTGATATGGTATCTCATCTCTCTCCAAATGGAAAACTAAGTTATGGTGAGATGCAATCTCTGATCTAACGTTCAAGGGTAGAAGTAAAACTCCTCAATTTTAGCCTTTGGAGATGGTTTTAACCTTTAGGGATTGAGAGAGCTTATTAATTCTTTGTGATATCAAAGTCAATGTCATAGATAATATGTACCTATGTAACAACCTACTGTGTGTCACTAGATTATTTTCAATAGCTCTTATCAACACATTTCAATTTAGTACCACAAATTGATCATGGGTCTTTTGACAGGTTCATGAAGCTTCGTTGATCCATGATGACCTTCCTTGCATGGATGATGATCCCTCACGGCGTGGCCAACCTTCAAACCATGCAGTTTATGGTGTTGACATGGCTATCCTTGCAGGTGATGCACTTTTCCCCCTTGGCTTCCAACATATTGTCTCACACACACCCTTTGATCTTGTTCCCGAGTCTCGCCTGCTCCGTGTGGTTGCTGAGATTGCCCGAGCTGTTGGTTCCAGAGGCATGGCAGCTGGACAGTTTCTTGACCTTGAGGGAGGACCCAACTCCGTTGAATTCGTCCAAGAAAAGAAATTTGGTGAACTGGCTCAGTGTTCTGCAGTATGTGGAGGACTTCTAGCTGGAGCAGAAGACCATGAGATACAGAGATTAAGAAGGTACGGAAGATCGGTTGGTGTGTTGTATCAGGTAGTTGATGATATTTTGGAAGAACAATCGAAAAAACTCGAAGAAACAAATAAGAGTAAGAGGAAAAAAGGGAAGAGCTATGTTGGAGTATATGGGATTGAGAAAGCTAAGGAGGTGGCAGAGGAACTGAGGACCAAAGCTAAGAAGGAATTGGAAGGATTTGAGAAGTATGGAGATAAAGTGATGCCTTTGTACAGCTTTGTGGACTATGCTGCTGATAGGAGCTTCAGTTTTGAAACTTCAAGTTGA

mRNA sequence

ATGGCGTTTTCACTCATGGCGGCATCCTCTCTTAGTATGCATTTTGGAAGAAAGACTCCAATTCGATGTTCTTCCTCTTCTTCCTCAGCTGTTTCTTCTCAAGCCAAATCGATTCAGTTTGACCTCAAAACGTACTGGAAACAGCTGATTATCGAGATCAACCAGAAGTTGGATGAAGCTGTTCCAATTCAGTACCCCGACCAGATCTACGAGGCTATGCGTTACTCCGTCTTGGCTCAAGGGGCCAAGCGAGCTCCTCCGGTTATGTGTGTCGCCGCCTGCGAGCTCTTCGGCGTCGACCGCCTCGCCGCTTTCCCCACCGCCTGTGCCCTCGAAATGGTTCATGAAGCTTCGTTGATCCATGATGACCTTCCTTGCATGGATGATGATCCCTCACGGCGTGGCCAACCTTCAAACCATGCAGTTTATGGTGTTGACATGGCTATCCTTGCAGGTGATGCACTTTTCCCCCTTGGCTTCCAACATATTGTCTCACACACACCCTTTGATCTTGTTCCCGAGTCTCGCCTGCTCCGTGTGGTTGCTGAGATTGCCCGAGCTGTTGGTTCCAGAGGCATGGCAGCTGGACAGTTTCTTGACCTTGAGGGAGGACCCAACTCCGTTGAATTCGTCCAAGAAAAGAAATTTGGTGAACTGGCTCAGTGTTCTGCAGTATGTGGAGGACTTCTAGCTGGAGCAGAAGACCATGAGATACAGAGATTAAGAAGGTACGGAAGATCGGTTGGTGTGTTGTATCAGGTAGTTGATGATATTTTGGAAGAACAATCGAAAAAACTCGAAGAAACAAATAAGAGTAAGAGGAAAAAAGGGAAGAGCTATGTTGGAGTATATGGGATTGAGAAAGCTAAGGAGGTGGCAGAGGAACTGAGGACCAAAGCTAAGAAGGAATTGGAAGGATTTGAGAAGTATGGAGATAAAGTGATGCCTTTGTACAGCTTTGTGGACTATGCTGCTGATAGGAGCTTCAGTTTTGAAACTTCAAGTTGA

Coding sequence (CDS)

ATGGCGTTTTCACTCATGGCGGCATCCTCTCTTAGTATGCATTTTGGAAGAAAGACTCCAATTCGATGTTCTTCCTCTTCTTCCTCAGCTGTTTCTTCTCAAGCCAAATCGATTCAGTTTGACCTCAAAACGTACTGGAAACAGCTGATTATCGAGATCAACCAGAAGTTGGATGAAGCTGTTCCAATTCAGTACCCCGACCAGATCTACGAGGCTATGCGTTACTCCGTCTTGGCTCAAGGGGCCAAGCGAGCTCCTCCGGTTATGTGTGTCGCCGCCTGCGAGCTCTTCGGCGTCGACCGCCTCGCCGCTTTCCCCACCGCCTGTGCCCTCGAAATGGTTCATGAAGCTTCGTTGATCCATGATGACCTTCCTTGCATGGATGATGATCCCTCACGGCGTGGCCAACCTTCAAACCATGCAGTTTATGGTGTTGACATGGCTATCCTTGCAGGTGATGCACTTTTCCCCCTTGGCTTCCAACATATTGTCTCACACACACCCTTTGATCTTGTTCCCGAGTCTCGCCTGCTCCGTGTGGTTGCTGAGATTGCCCGAGCTGTTGGTTCCAGAGGCATGGCAGCTGGACAGTTTCTTGACCTTGAGGGAGGACCCAACTCCGTTGAATTCGTCCAAGAAAAGAAATTTGGTGAACTGGCTCAGTGTTCTGCAGTATGTGGAGGACTTCTAGCTGGAGCAGAAGACCATGAGATACAGAGATTAAGAAGGTACGGAAGATCGGTTGGTGTGTTGTATCAGGTAGTTGATGATATTTTGGAAGAACAATCGAAAAAACTCGAAGAAACAAATAAGAGTAAGAGGAAAAAAGGGAAGAGCTATGTTGGAGTATATGGGATTGAGAAAGCTAAGGAGGTGGCAGAGGAACTGAGGACCAAAGCTAAGAAGGAATTGGAAGGATTTGAGAAGTATGGAGATAAAGTGATGCCTTTGTACAGCTTTGTGGACTATGCTGCTGATAGGAGCTTCAGTTTTGAAACTTCAAGTTGA

Protein sequence

MAFSLMAASSLSMHFGRKTPIRCSSSSSSAVSSQAKSIQFDLKTYWKQLIIEINQKLDEAVPIQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLIHDDLPCMDDDPSRRGQPSNHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGELAQCSAVCGGLLAGAEDHEIQRLRRYGRSVGVLYQVVDDILEEQSKKLEETNKSKRKKGKSYVGVYGIEKAKEVAEELRTKAKKELEGFEKYGDKVMPLYSFVDYAADRSFSFETSS
Homology
[Close]
BLAST of Cla015797 vs. Swiss-Prot
Match: GGR_ARATH (Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic OS=Arabidopsis thaliana GN=GGR PE=1 SV=2)

HSP 1 Score: 409.1 bits (1050), Expect = 4.8e-113
Identity = 217/315 (68.89%), Postives = 244/315 (77.46%), Query Frame = 1 

Query: 19  TPIRCSSSSSSAVSSQAKSIQFDLKTYWKQLIIEINQKLDEAVPIQYPDQIYEAMRYSVL 78
           +P    SSSSSA  S    + FDL+TYW  LI EINQKLDEA+P+++P  IYEAMRYSVL
Sbjct: 28  SPAAIRSSSSSAPGS----LNFDLRTYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVL 87

Query: 79  AQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLIHDDLPCMDDDPSRRGQPS 138
           AQGAKRAPPVMCVAACELFG DRLAAFPTACALEMVH ASLIHDDLPCMDDDP RRG+PS
Sbjct: 88  AQGAKRAPPVMCVAACELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPS 147

Query: 139 NHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIARAVGSRGMAAGQF 198
           NH VYG  MAILAGDALFPL FQHIVSHTP DLVP + +LR++ EIAR VGS GMAAGQ+
Sbjct: 148 NHTVYGSGMAILAGDALFPLAFQHIVSHTPPDLVPRATILRLITEIARTVGSTGMAAGQY 207

Query: 199 LDLEGGPNSVEFVQEKKFGELAQCSAVCGGLLAGAEDHEIQRLRRYGRSVGVLYQVVDDI 258
           +DLEGGP  + FVQEKKFG + +CSAVCGGLL GA + E+Q LRRYGR+VG+LYQVVDDI
Sbjct: 208 VDLEGGPFPLSFVQEKKFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDI 267

Query: 259 LEEQSKKLEETNKSKRKKGKSYVGVYGIEKA-KEVAEELRTKAKKELEGFE-KY--GDKV 318
            E+              K KSY G  G EK   E+AEEL+ KAKKEL+ F+ KY  GD +
Sbjct: 268 TED--------------KKKSYDG--GAEKGMMEMAEELKEKAKKELQVFDNKYGGGDTL 322

Query: 319 MPLYSFVDYAADRSF 330
           +PLY+FVDYAA R F
Sbjct: 328 VPLYTFVDYAAHRHF 322

[Close]
BLAST of Cla015797 vs. Swiss-Prot
Match: GGPPS_SINAL (Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis alba GN=GGPS1 PE=1 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 2.1e-68
Identity = 144/320 (45.00%), Postives = 209/320 (65.31%), Query Frame = 1 

Query: 24  SSSSSSAVSSQ-----AKSIQFDLKTYWKQLIIEINQKLDEAVPIQYPDQIYEAMRYSVL 83
           SSSSSS ++ +     + S  FD  +Y  +    +N+ LD AVP++ P +I+EAMRYS+L
Sbjct: 49  SSSSSSLITKEDNNLKSSSSSFDFMSYIIRKADSVNKALDSAVPLREPLKIHEAMRYSLL 108

Query: 84  AQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLIHDDLPCMDDDPSRRGQPS 143
           A G KR  PV+C+AACEL G +   A P  CA+EM+H  SLIHDDLPCMD+D  RRG+P+
Sbjct: 109 A-GGKRVRPVLCIAACELVGGEESLAMPARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPT 168

Query: 144 NHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIARAVGSRGMAAGQF 203
           NH VYG D+A+LAGDAL    F+H+ S T  ++ P +R++R V E+A+A+G+ G+ AGQ 
Sbjct: 169 NHKVYGEDVAVLAGDALLSFAFEHLASATSSEVSP-ARVVRAVGELAKAIGTEGLVAGQV 228

Query: 204 LDL--EG------GPNSVEFVQEKKFGELAQCSAVCGGLLAGAEDHEIQRLRRYGRSVGV 263
           +D+  EG      G   ++F+   K   L + SAV GG++ G  D EI+RLR++ R +G+
Sbjct: 229 VDISSEGLDLNNVGLEHLKFIHLHKTAALLEASAVLGGIIGGGSDEEIERLRKFARCIGL 288

Query: 264 LYQVVDDILE--EQSKKLEET-NKSKRKKGKSYVGVYGIEKAKEVAEELRTKAKKELEGF 323
           L+QVVDDIL+  + S++L +T  K       +Y  + G+EK++E AE+L T+A+ +L GF
Sbjct: 289 LFQVVDDILDVTKSSQELGKTAGKDLIADKLTYPKLMGLEKSREFAEKLNTEARDQLLGF 348

Query: 324 EKYGDKVMPLYSFVDYAADR 328
           +   DKV PL +  +Y A+R
Sbjct: 349 D--SDKVAPLLALANYIANR 364

[Close]
BLAST of Cla015797 vs. Swiss-Prot
Match: GGPP1_ARATH (Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic OS=Arabidopsis thaliana GN=GGPPS1 PE=1 SV=2)

HSP 1 Score: 260.4 bits (664), Expect = 2.7e-68
Identity = 148/327 (45.26%), Postives = 206/327 (63.00%), Query Frame = 1 

Query: 22  RCSSSSSSAVSS----------QAKSIQFDLKTYWKQLIIEINQKLDEAVPIQYPDQIYE 81
           R  SSSSS VSS          Q++   FD  +Y       +N+ LD AVP++ P +I+E
Sbjct: 46  RTVSSSSSIVSSSVVTKEDNLRQSEPSSFDFMSYIITKAELVNKALDSAVPLREPLKIHE 105

Query: 82  AMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLIHDDLPCMDDDP 141
           AMRYS+LA G KR  PV+C+AACEL G +   A P ACA+EM+H  SLIHDDLPCMD+D 
Sbjct: 106 AMRYSLLA-GGKRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDD 165

Query: 142 SRRGQPSNHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIARAVGSR 201
            RRG+P+NH V+G D+A+LAGDAL    F+H+ S T  D+V   R++R V E+A+A+G+ 
Sbjct: 166 LRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTE 225

Query: 202 GMAAGQFLDL--EG------GPNSVEFVQEKKFGELAQCSAVCGGLLAGAEDHEIQRLRR 261
           G+ AGQ +D+  EG      G   +EF+   K   L + SAV G ++ G  D EI+RLR+
Sbjct: 226 GLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRK 285

Query: 262 YGRSVGVLYQVVDDILE--EQSKKLEET-NKSKRKKGKSYVGVYGIEKAKEVAEELRTKA 321
           + R +G+L+QVVDDIL+  + SK+L +T  K       +Y  + G+EK++E AE+L  +A
Sbjct: 286 FARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIADKLTYPKIMGLEKSREFAEKLNREA 345

Query: 322 KKELEGFEKYGDKVMPLYSFVDYAADR 328
           + +L GF+   DKV PL +  +Y A R
Sbjct: 346 RDQLLGFD--SDKVAPLLALANYIAYR 369

[Close]
BLAST of Cla015797 vs. Swiss-Prot
Match: GGPPS_HEVBR (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis GN=GGPS PE=1 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 3.7e-65
Identity = 140/336 (41.67%), Postives = 210/336 (62.50%), Query Frame = 1 

Query: 10  SLSMHFGRKTPIRCSSSSSSAVSSQAKSIQ---------FDLKTYWKQLIIEINQKLDEA 69
           SL++ F  +   R  SS S+ ++ + +++Q         FD K+Y  Q    INQ L+ A
Sbjct: 38  SLAISFAYRKSERPISSVSAIITKEEETLQEEQNNPPPSFDFKSYMLQKGNSINQALEAA 97

Query: 70  VPIQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI 129
           +P+Q P +I+E+MRYS+LA G KR  P +C+AACEL G +   A P ACA+EM+H  SLI
Sbjct: 98  IPLQEPAKIHESMRYSLLA-GGKRVRPALCLAACELVGGNDSMAMPAACAVEMIHTMSLI 157

Query: 130 HDDLPCMDDDPSRRGQPSNHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV 189
           HDDLPCMD+D  RRG+P+NH V+G D+A+LAGDAL    F+HI   T    V  +R++R 
Sbjct: 158 HDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIAVSTL--NVSSARIVRA 217

Query: 190 VAEIARAVGSRGMAAGQFLDLEGGPNS------VEFVQEKKFGELAQCSAVCGGLLAGAE 249
           V E+A+A+G+ G+ AGQ +D+    +S      +EF+   K  +L + + V G +L G  
Sbjct: 218 VGELAKAIGAEGLVAGQVVDINSEGSSEVDLEKLEFIHIHKTAKLLEGAVVLGAILGGGT 277

Query: 250 DHEIQRLRRYGRSVGVLYQVVDDILE--EQSKKLEET-NKSKRKKGKSYVGVYGIEKAKE 309
           D E+++LR+Y R +G+L+QVVDDIL+  + S++L +T  K       +Y  + GIEK++E
Sbjct: 278 DEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSRE 337

Query: 310 VAEELRTKAKKELEGFEKYGDKVMPLYSFVDYAADR 328
            AE+L  +A+++L GF+   +K  PL +  +Y A R
Sbjct: 338 FAEKLNKEAQEQLAGFDP--EKAAPLIALANYIAHR 368

[Close]
BLAST of Cla015797 vs. Swiss-Prot
Match: GGPPS_CAPAN (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Capsicum annuum GN=GGPS1 PE=3 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 4.1e-64
Identity = 140/336 (41.67%), Postives = 206/336 (61.31%), Query Frame = 1 

Query: 9   SSLSMHFGRKTPIRCSSSSSSAVSSQAKSIQ-------FDLKTYWKQLIIEINQKLDEAV 68
           S ++    +K P    + S+ A + + + I+       F+ K Y  +  I +N+ LDEA+
Sbjct: 38  SKINPKLNKKRPFSPLTVSAIATTKEDERIEAAQTEEPFNFKIYVTEKAISVNKALDEAI 97

Query: 69  PIQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLIH 128
            ++ P  I+EAMRYS+LA G KR  P++C+AACEL G ++  A   ACA+EM+H  SLIH
Sbjct: 98  IVKEPHVIHEAMRYSLLA-GGKRVRPMLCLAACELVGGNQENAMAAACAVEMIHTMSLIH 157

Query: 129 DDLPCMDDDPSRRGQPSNHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRVV 188
           DDLPCMD+D  RRG+P+NH +YG D+A+LAGD+L    F+HIV+ T    V  SR++  V
Sbjct: 158 DDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDSLLAFAFEHIVNSTAG--VTPSRIVGAV 217

Query: 189 AEIARAVGSRGMAAGQFLDLEGGPN------SVEFVQEKKFGELAQCSAVCGGLLAGAED 248
           AE+A+++G+ G+ AGQ  D++   N      ++EF+   K   L + S V G +L G  +
Sbjct: 218 AELAKSIGTEGLVAGQVADIKCTGNASVSLETLEFIHVHKTAALLESSVVLGAILGGGTN 277

Query: 249 HEIQRLRRYGRSVGVLYQVVDDILEEQSKKLEETNKSKRK----KGKSYVGVYGIEKAKE 308
            E+++LRR+ R +G+L+QVVDDIL + +K  EE  K+  K       +Y  + G+EKAKE
Sbjct: 278 VEVEKLRRFARCIGLLFQVVDDIL-DVTKSSEELGKTAGKDLVVDKTTYPKLLGLEKAKE 337

Query: 309 VAEELRTKAKKELEGFEKYGDKVMPLYSFVDYAADR 328
            A EL  +AK++LEGF+    K  PL +  DY A R
Sbjct: 338 FAAELNREAKQQLEGFD--SRKAAPLIALADYIAYR 367

[Close]
BLAST of Cla015797 vs. TrEMBL
Match: A0A0A0K0P7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G017680 PE=3 SV=1)

HSP 1 Score: 621.3 bits (1601), Expect = 6.8e-175
Identity = 312/335 (93.13%), Postives = 323/335 (96.42%), Query Frame = 1 

Query: 1   MAFSLMAASSLSMHFGRKTPIRCSSSSSSAVSSQAKSIQFDLKTYWKQLIIEINQKLDEA 60
           MAFSLMAASSL+  F RKTPIRCSSSSS A+SSQ +SI FDLKTYWKQLI+EINQKLDEA
Sbjct: 1   MAFSLMAASSLTTSFQRKTPIRCSSSSSPALSSQPQSIHFDLKTYWKQLILEINQKLDEA 60

Query: 61  VPIQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI 120
           VP+QYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI
Sbjct: 61  VPLQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI 120

Query: 121 HDDLPCMDDDPSRRGQPSNHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV 180
           HDDLPCMDDDPSRRGQPSNH VYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV
Sbjct: 121 HDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV 180

Query: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGELAQCSAVCGGLLAGAEDHEIQR 240
           VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGE+AQCSAVCGGLLAGAEDHEIQR
Sbjct: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEMAQCSAVCGGLLAGAEDHEIQR 240

Query: 241 LRRYGRSVGVLYQVVDDILEEQSKKLEETNKSKRKKGKSYVGVYGIEKAKEVAEELRTKA 300
           LRRYGR+VGVLYQVVDDILEEQSKKL+ T++SKR KGKSYV VYGIEKAKEVAEELR KA
Sbjct: 241 LRRYGRAVGVLYQVVDDILEEQSKKLDYTDESKRSKGKSYVEVYGIEKAKEVAEELRAKA 300

Query: 301 KKELEGFEKYGDKVMPLYSFVDYAADRSFSFETSS 336
           K ELEGFEKYGD+VMPLYSFVDYAADRSFSFETSS
Sbjct: 301 KNELEGFEKYGDQVMPLYSFVDYAADRSFSFETSS 335

[Close]
BLAST of Cla015797 vs. TrEMBL
Match: B9H1M5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s18610g PE=3 SV=2)

HSP 1 Score: 516.9 bits (1330), Expect = 1.8e-143
Identity = 258/319 (80.88%), Postives = 284/319 (89.03%), Query Frame = 1 

Query: 16  GRKTPIRCSSSSSSAVSSQAKSIQFDLKTYWKQLIIEINQKLDEAVPIQYPDQIYEAMRY 75
           G+ + I+CS S    VSSQ+K+ QFDLKTYW  LI EINQ+LD+AVPIQYPD+IYEAMRY
Sbjct: 32  GKMSKIQCSLS----VSSQSKTAQFDLKTYWTTLIGEINQELDQAVPIQYPDKIYEAMRY 91

Query: 76  SVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLIHDDLPCMDDDPSRRG 135
           SVLA+GAKRAPPVMCVAACELFG +RLAAFPTACALEMVH ASLIHDDLPCMDDDPSRRG
Sbjct: 92  SVLAKGAKRAPPVMCVAACELFGGNRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRG 151

Query: 136 QPSNHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIARAVGSRGMAA 195
           QPSNH +YGVDMAILAGDALFPLGF HIVS TP DLVPE RLLRV+AEIARAVGSRGMAA
Sbjct: 152 QPSNHTIYGVDMAILAGDALFPLGFSHIVSQTPSDLVPEPRLLRVIAEIARAVGSRGMAA 211

Query: 196 GQFLDLEGGPNSVEFVQEKKFGELAQCSAVCGGLLAGAEDHEIQRLRRYGRSVGVLYQVV 255
           GQFLDLEGGPN+VEFVQEKK+GE+ +CSAVCGGLLAGA D EI+RLRRYGR+VGVLYQVV
Sbjct: 212 GQFLDLEGGPNAVEFVQEKKYGEMGECSAVCGGLLAGATDDEIRRLRRYGRAVGVLYQVV 271

Query: 256 DDILEEQSKKLEETNKSKRKKGKSYVGVYGIEKAKEVAEELRTKAKKELEGFEKYGDKVM 315
           DDILE ++ K +   + KRKKGKSYV VYG+EKA EVAEELR KAKKEL+GFEKYG+ V+
Sbjct: 272 DDILEAKTMKSKLDEEEKRKKGKSYVAVYGVEKATEVAEELRAKAKKELDGFEKYGESVV 331

Query: 316 PLYSFVDYAADRSFSFETS 335
           PLYSFVDYAADR FSF  S
Sbjct: 332 PLYSFVDYAADRGFSFGES 346

[Close]
BLAST of Cla015797 vs. TrEMBL
Match: B9HR16_POPTR (Geranylgeranyl pyrophosphate synthase family protein OS=Populus trichocarpa GN=POPTR_0009s14150g PE=3 SV=2)

HSP 1 Score: 516.2 bits (1328), Expect = 3.1e-143
Identity = 263/349 (75.36%), Postives = 293/349 (83.95%), Query Frame = 1 

Query: 1   MAFSLMAASSLSM--------------HFGRKTPIRCSSSSSSAVSSQAKSIQFDLKTYW 60
           MA SL A  SLS+                 + +PI+CS S    VS+ +K+ QFDLKTYW
Sbjct: 1   MALSLAALPSLSITLCIPKKGSNLYPPKLNKMSPIQCSLS----VSTHSKTPQFDLKTYW 60

Query: 61  KQLIIEINQKLDEAVPIQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFP 120
             LI+EINQKLD+AVPIQYPD+IYEAMRYSVLA+GAKRAPPVMCVAACELFG +R AAFP
Sbjct: 61  TTLILEINQKLDQAVPIQYPDKIYEAMRYSVLAKGAKRAPPVMCVAACELFGGNRHAAFP 120

Query: 121 TACALEMVHEASLIHDDLPCMDDDPSRRGQPSNHAVYGVDMAILAGDALFPLGFQHIVSH 180
           TACALEMVH ASLIHDDLPCMDDDPSRRGQPSNH +YGVDMAILAGDALFPLGF+HIVSH
Sbjct: 121 TACALEMVHSASLIHDDLPCMDDDPSRRGQPSNHKIYGVDMAILAGDALFPLGFRHIVSH 180

Query: 181 TPFDLVPESRLLRVVAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGELAQCSAVC 240
           TP DLVPE RLL V+AEIARAVGS GMAAGQFLDLEGGPNSVEFVQEKKFGE+ +CSAVC
Sbjct: 181 TPSDLVPEPRLLSVIAEIARAVGSTGMAAGQFLDLEGGPNSVEFVQEKKFGEMGECSAVC 240

Query: 241 GGLLAGAEDHEIQRLRRYGRSVGVLYQVVDDILEEQSKKLEETNKSKRKKGKSYVGVYGI 300
           GGLLAGA+D EIQRLRRYGR+VGVLYQVVDDILE ++ K +     K++KGKSYV +YG+
Sbjct: 241 GGLLAGAKDDEIQRLRRYGRAVGVLYQVVDDILEAKTMKSKVDEDKKKRKGKSYVALYGV 300

Query: 301 EKAKEVAEELRTKAKKELEGFEKYGDKVMPLYSFVDYAADRSFSFETSS 336
           EKA EVAEELR KAK+EL+GFEKYG+ V+PLYSFVDYAADR FSF  SS
Sbjct: 301 EKAIEVAEELRAKAKEELDGFEKYGESVLPLYSFVDYAADRGFSFGESS 345

[Close]
BLAST of Cla015797 vs. TrEMBL
Match: W9RIP4_9ROSA (Heterodimeric geranylgeranyl pyrophosphate synthase small subunit OS=Morus notabilis GN=L484_001146 PE=3 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 1.3e-141
Identity = 259/340 (76.18%), Postives = 294/340 (86.47%), Query Frame = 1 

Query: 1   MAFSLMAASS---LSMHFGRKTPIRCSSSSSSAVSSQAKSIQFDLKTYWKQLIIEINQKL 60
           MAFS++++SS   L M      P+RCSS+S   VSS+++S+QFDLK YW  LI EI+QKL
Sbjct: 1   MAFSVLSSSSHLCLPMKPRSFIPVRCSSAS---VSSRSRSLQFDLKKYWTTLITEIDQKL 60

Query: 61  DEAVPIQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEA 120
           DEA+P++YP+ IY AMRYS LA+GAKRAPPVMCVAACEL G DRLAAFPTACALEMVH A
Sbjct: 61  DEAIPVKYPEHIYHAMRYSALAEGAKRAPPVMCVAACELLGGDRLAAFPTACALEMVHAA 120

Query: 121 SLIHDDLPCMDDDPSRRGQPSNHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRL 180
           SLIHDDLPCMDDD SRRG+PSNH +YGVD+AILAGDALFPLGF+HIVSHTP DLVPE R+
Sbjct: 121 SLIHDDLPCMDDDTSRRGKPSNHTIYGVDLAILAGDALFPLGFRHIVSHTPSDLVPEPRV 180

Query: 181 LRVVAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGELAQCSAVCGGLLAGAEDHE 240
           LRV+AEIARAVGS GMAAGQF+DLEGGPNS+EFVQEKKFGE+ +CSAVCGGLLAGA D E
Sbjct: 181 LRVIAEIARAVGSTGMAAGQFVDLEGGPNSIEFVQEKKFGEMGECSAVCGGLLAGANDEE 240

Query: 241 IQRLRRYGRSVGVLYQVVDDILEEQSKKLEETNKSKRKK-GKSYVGVYGIEKAKEVAEEL 300
           IQRLRRYGR+VGVLYQVVDDILEE+SKK  ET+ ++RKK GKSYV VYG+EKA EVAEEL
Sbjct: 241 IQRLRRYGRAVGVLYQVVDDILEEKSKKGHETDSAERKKKGKSYVEVYGVEKAMEVAEEL 300

Query: 301 RTKAKKELEGFE-KYGDKVMPLYSFVDYAADRSFSFETSS 336
           R KAK+EL+GFE KYGD  +PLYSFVDYA DR FS   SS
Sbjct: 301 RAKAKQELDGFEKKYGDSAVPLYSFVDYAVDRGFSIGNSS 337

[Close]
BLAST of Cla015797 vs. TrEMBL
Match: B9SUY3_RICCO (Geranyl geranyl pyrophosphate synthase, putative OS=Ricinus communis GN=RCOM_1373490 PE=3 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 1.9e-140
Identity = 253/338 (74.85%), Postives = 291/338 (86.09%), Query Frame = 1 

Query: 4   SLMAASSLSMHFGRKTP-----------IRCSSSSSSAVSSQAKSIQFDLKTYWKQLIIE 63
           S+ ++ + +++  RKTP           I+C S + S VSSQ+KS QFDLKTYW  LI E
Sbjct: 6   SVSSSPAPALYLPRKTPNVHHLSKLGIRIQCCSPTVS-VSSQSKSTQFDLKTYWTTLIAE 65

Query: 64  INQKLDEAVPIQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALE 123
           INQKLD+A+P+Q+P+QIYEAMRYS LA+GAKRAPPVMCVAACELFG +RLAAFPTACALE
Sbjct: 66  INQKLDQAIPVQFPEQIYEAMRYSALAKGAKRAPPVMCVAACELFGGNRLAAFPTACALE 125

Query: 124 MVHEASLIHDDLPCMDDDPSRRGQPSNHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLV 183
           MVH ASLIHDDLPCMDDDPSRRGQPSNH +YGVDMAILAGDALFPLG++HIVSHTP  LV
Sbjct: 126 MVHTASLIHDDLPCMDDDPSRRGQPSNHTIYGVDMAILAGDALFPLGYRHIVSHTPTGLV 185

Query: 184 PESRLLRVVAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGELAQCSAVCGGLLAG 243
           PE RLLRV+AEIARAVGS GMAAGQFLDLEGGP+ VEF QEKK+GE+++CSAVCGGLLAG
Sbjct: 186 PEPRLLRVIAEIARAVGSTGMAAGQFLDLEGGPSFVEFAQEKKYGEMSECSAVCGGLLAG 245

Query: 244 AEDHEIQRLRRYGRSVGVLYQVVDDILEEQSKKLEETNKSKRKKGKSYVGVYGIEKAKEV 303
           AED EIQRLRRYGR+VGVLYQV+DD+LE  +K + + N+ KR+ GKSYV +YGIEKA EV
Sbjct: 246 AEDDEIQRLRRYGRAVGVLYQVIDDVLE--AKAMNKENEEKRRNGKSYVSLYGIEKAMEV 305

Query: 304 AEELRTKAKKELEGFEKYGDKVMPLYSFVDYAADRSFS 331
           AEELRT+AKKEL+GF KYGD VMPLYSFVDYAADR F+
Sbjct: 306 AEELRTQAKKELDGFAKYGDSVMPLYSFVDYAADRGFT 340

[Close]
BLAST of Cla015797 vs. NCBI nr
Match: gi|659094148|ref|XP_008447910.1| (PREDICTED: LOW QUALITY PROTEIN: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic [Cucumis melo])

HSP 1 Score: 628.6 bits (1620), Expect = 6.1e-177
Identity = 316/335 (94.33%), Postives = 326/335 (97.31%), Query Frame = 1 

Query: 1   MAFSLMAASSLSMHFGRKTPIRCSSSSSSAVSSQAKSIQFDLKTYWKQLIIEINQKLDEA 60
           MAFSLMAASSLS  FGRKTPIRCSSSSSSA+SSQ KS+ FDLKTYWKQLI+EINQKLDEA
Sbjct: 1   MAFSLMAASSLSTSFGRKTPIRCSSSSSSALSSQTKSLHFDLKTYWKQLILEINQKLDEA 60

Query: 61  VPIQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI 120
           V IQYP+QIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI
Sbjct: 61  VLIQYPEQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI 120

Query: 121 HDDLPCMDDDPSRRGQPSNHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV 180
           HDDLPCMDDDPSRRGQPSNH VYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV
Sbjct: 121 HDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV 180

Query: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGELAQCSAVCGGLLAGAEDHEIQR 240
           VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQ KKFGE+AQCSAVCGGLLAGAED EIQR
Sbjct: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQXKKFGEMAQCSAVCGGLLAGAEDPEIQR 240

Query: 241 LRRYGRSVGVLYQVVDDILEEQSKKLEETNKSKRKKGKSYVGVYGIEKAKEVAEELRTKA 300
           LRRYGR+VGVLYQVVDDILEEQSKKL+ETN+SKR+KGKSYVGVYGIEKAKEVAEELRTKA
Sbjct: 241 LRRYGRAVGVLYQVVDDILEEQSKKLDETNESKRRKGKSYVGVYGIEKAKEVAEELRTKA 300

Query: 301 KKELEGFEKYGDKVMPLYSFVDYAADRSFSFETSS 336
           K ELEGFEKYGD+VMPLYSFVDYAADRSFSFETSS
Sbjct: 301 KNELEGFEKYGDRVMPLYSFVDYAADRSFSFETSS 335

[Close]
BLAST of Cla015797 vs. NCBI nr
Match: gi|449454249|ref|XP_004144868.1| (PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 621.3 bits (1601), Expect = 9.8e-175
Identity = 312/335 (93.13%), Postives = 323/335 (96.42%), Query Frame = 1 

Query: 1   MAFSLMAASSLSMHFGRKTPIRCSSSSSSAVSSQAKSIQFDLKTYWKQLIIEINQKLDEA 60
           MAFSLMAASSL+  F RKTPIRCSSSSS A+SSQ +SI FDLKTYWKQLI+EINQKLDEA
Sbjct: 1   MAFSLMAASSLTTSFQRKTPIRCSSSSSPALSSQPQSIHFDLKTYWKQLILEINQKLDEA 60

Query: 61  VPIQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI 120
           VP+QYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI
Sbjct: 61  VPLQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI 120

Query: 121 HDDLPCMDDDPSRRGQPSNHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV 180
           HDDLPCMDDDPSRRGQPSNH VYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV
Sbjct: 121 HDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV 180

Query: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGELAQCSAVCGGLLAGAEDHEIQR 240
           VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGE+AQCSAVCGGLLAGAEDHEIQR
Sbjct: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEMAQCSAVCGGLLAGAEDHEIQR 240

Query: 241 LRRYGRSVGVLYQVVDDILEEQSKKLEETNKSKRKKGKSYVGVYGIEKAKEVAEELRTKA 300
           LRRYGR+VGVLYQVVDDILEEQSKKL+ T++SKR KGKSYV VYGIEKAKEVAEELR KA
Sbjct: 241 LRRYGRAVGVLYQVVDDILEEQSKKLDYTDESKRSKGKSYVEVYGIEKAKEVAEELRAKA 300

Query: 301 KKELEGFEKYGDKVMPLYSFVDYAADRSFSFETSS 336
           K ELEGFEKYGD+VMPLYSFVDYAADRSFSFETSS
Sbjct: 301 KNELEGFEKYGDQVMPLYSFVDYAADRSFSFETSS 335

[Close]
BLAST of Cla015797 vs. NCBI nr
Match: gi|743792842|ref|XP_011045566.1| (PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic [Populus euphratica])

HSP 1 Score: 519.6 bits (1337), Expect = 4.0e-144
Identity = 259/319 (81.19%), Postives = 282/319 (88.40%), Query Frame = 1 

Query: 17  RKTPIRCSSSSSSAVSSQAKSIQFDLKTYWKQLIIEINQKLDEAVPIQYPDQIYEAMRYS 76
           + +PI+CS S    VS+ +K+ QFDLKTYW  LI+EINQKLD+AVPIQYPD+IYEAMRYS
Sbjct: 31  KMSPIQCSLS----VSTHSKTPQFDLKTYWTDLILEINQKLDQAVPIQYPDKIYEAMRYS 90

Query: 77  VLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLIHDDLPCMDDDPSRRGQ 136
           VLA+GAKRAPPVMCVAACELFG DR AAFPTACALEMVH ASLIHDDLPCMDDDPSRRGQ
Sbjct: 91  VLAKGAKRAPPVMCVAACELFGGDRHAAFPTACALEMVHSASLIHDDLPCMDDDPSRRGQ 150

Query: 137 PSNHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIARAVGSRGMAAG 196
           PSNH +YGVDMAILAGDALFPLGF HIVSHTP DLVPE RLL V+AEIARAVGS GMAAG
Sbjct: 151 PSNHKIYGVDMAILAGDALFPLGFHHIVSHTPSDLVPEPRLLSVIAEIARAVGSTGMAAG 210

Query: 197 QFLDLEGGPNSVEFVQEKKFGELAQCSAVCGGLLAGAEDHEIQRLRRYGRSVGVLYQVVD 256
           QFLDLEGGPNSVEFVQEKKFGE+ +CSAVCGGLLAGA+D EIQRLRRYGR+VGVLYQVVD
Sbjct: 211 QFLDLEGGPNSVEFVQEKKFGEMGECSAVCGGLLAGAKDDEIQRLRRYGRAVGVLYQVVD 270

Query: 257 DILEEQSKKLEETNKSKRKKGKSYVGVYGIEKAKEVAEELRTKAKKELEGFEKYGDKVMP 316
           DILE ++ K +     K+KKGKSYV  YG+EKA EVAEELR KAKKEL+GFEKYGD V+P
Sbjct: 271 DILEAKTMKSKVDEDKKKKKGKSYVAFYGVEKAIEVAEELRAKAKKELDGFEKYGDSVLP 330

Query: 317 LYSFVDYAADRSFSFETSS 336
           LYSFVDYAADR FSF  SS
Sbjct: 331 LYSFVDYAADRGFSFGESS 345

[Close]
BLAST of Cla015797 vs. NCBI nr
Match: gi|566167266|ref|XP_002306207.2| (hypothetical protein POPTR_0004s18610g [Populus trichocarpa])

HSP 1 Score: 516.9 bits (1330), Expect = 2.6e-143
Identity = 258/319 (80.88%), Postives = 284/319 (89.03%), Query Frame = 1 

Query: 16  GRKTPIRCSSSSSSAVSSQAKSIQFDLKTYWKQLIIEINQKLDEAVPIQYPDQIYEAMRY 75
           G+ + I+CS S    VSSQ+K+ QFDLKTYW  LI EINQ+LD+AVPIQYPD+IYEAMRY
Sbjct: 32  GKMSKIQCSLS----VSSQSKTAQFDLKTYWTTLIGEINQELDQAVPIQYPDKIYEAMRY 91

Query: 76  SVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLIHDDLPCMDDDPSRRG 135
           SVLA+GAKRAPPVMCVAACELFG +RLAAFPTACALEMVH ASLIHDDLPCMDDDPSRRG
Sbjct: 92  SVLAKGAKRAPPVMCVAACELFGGNRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRG 151

Query: 136 QPSNHAVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIARAVGSRGMAA 195
           QPSNH +YGVDMAILAGDALFPLGF HIVS TP DLVPE RLLRV+AEIARAVGSRGMAA
Sbjct: 152 QPSNHTIYGVDMAILAGDALFPLGFSHIVSQTPSDLVPEPRLLRVIAEIARAVGSRGMAA 211

Query: 196 GQFLDLEGGPNSVEFVQEKKFGELAQCSAVCGGLLAGAEDHEIQRLRRYGRSVGVLYQVV 255
           GQFLDLEGGPN+VEFVQEKK+GE+ +CSAVCGGLLAGA D EI+RLRRYGR+VGVLYQVV
Sbjct: 212 GQFLDLEGGPNAVEFVQEKKYGEMGECSAVCGGLLAGATDDEIRRLRRYGRAVGVLYQVV 271

Query: 256 DDILEEQSKKLEETNKSKRKKGKSYVGVYGIEKAKEVAEELRTKAKKELEGFEKYGDKVM 315
           DDILE ++ K +   + KRKKGKSYV VYG+EKA EVAEELR KAKKEL+GFEKYG+ V+
Sbjct: 272 DDILEAKTMKSKLDEEEKRKKGKSYVAVYGVEKATEVAEELRAKAKKELDGFEKYGESVV 331

Query: 316 PLYSFVDYAADRSFSFETS 335
           PLYSFVDYAADR FSF  S
Sbjct: 332 PLYSFVDYAADRGFSFGES 346

[Close]
BLAST of Cla015797 vs. NCBI nr
Match: gi|566187928|ref|XP_002312936.2| (geranylgeranyl pyrophosphate synthase family protein [Populus trichocarpa])

HSP 1 Score: 516.2 bits (1328), Expect = 4.4e-143
Identity = 263/349 (75.36%), Postives = 293/349 (83.95%), Query Frame = 1 

Query: 1   MAFSLMAASSLSM--------------HFGRKTPIRCSSSSSSAVSSQAKSIQFDLKTYW 60
           MA SL A  SLS+                 + +PI+CS S    VS+ +K+ QFDLKTYW
Sbjct: 1   MALSLAALPSLSITLCIPKKGSNLYPPKLNKMSPIQCSLS----VSTHSKTPQFDLKTYW 60

Query: 61  KQLIIEINQKLDEAVPIQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFP 120
             LI+EINQKLD+AVPIQYPD+IYEAMRYSVLA+GAKRAPPVMCVAACELFG +R AAFP
Sbjct: 61  TTLILEINQKLDQAVPIQYPDKIYEAMRYSVLAKGAKRAPPVMCVAACELFGGNRHAAFP 120

Query: 121 TACALEMVHEASLIHDDLPCMDDDPSRRGQPSNHAVYGVDMAILAGDALFPLGFQHIVSH 180
           TACALEMVH ASLIHDDLPCMDDDPSRRGQPSNH +YGVDMAILAGDALFPLGF+HIVSH
Sbjct: 121 TACALEMVHSASLIHDDLPCMDDDPSRRGQPSNHKIYGVDMAILAGDALFPLGFRHIVSH 180

Query: 181 TPFDLVPESRLLRVVAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGELAQCSAVC 240
           TP DLVPE RLL V+AEIARAVGS GMAAGQFLDLEGGPNSVEFVQEKKFGE+ +CSAVC
Sbjct: 181 TPSDLVPEPRLLSVIAEIARAVGSTGMAAGQFLDLEGGPNSVEFVQEKKFGEMGECSAVC 240

Query: 241 GGLLAGAEDHEIQRLRRYGRSVGVLYQVVDDILEEQSKKLEETNKSKRKKGKSYVGVYGI 300
           GGLLAGA+D EIQRLRRYGR+VGVLYQVVDDILE ++ K +     K++KGKSYV +YG+
Sbjct: 241 GGLLAGAKDDEIQRLRRYGRAVGVLYQVVDDILEAKTMKSKVDEDKKKRKGKSYVALYGV 300

Query: 301 EKAKEVAEELRTKAKKELEGFEKYGDKVMPLYSFVDYAADRSFSFETSS 336
           EKA EVAEELR KAK+EL+GFEKYG+ V+PLYSFVDYAADR FSF  SS
Sbjct: 301 EKAIEVAEELRAKAKEELDGFEKYGESVLPLYSFVDYAADRGFSFGESS 345

The following BLAST results are available for this feature:
BLAST of Cla015797 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GGR_ARATH4.8e-11368.89Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic... [more]
GGPPS_SINAL2.1e-6845.00Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis al... [more]
GGPP1_ARATH2.7e-6845.26Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplast... [more]
GGPPS_HEVBR3.7e-6541.67Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis GN=GG... [more]
GGPPS_CAPAN4.1e-6441.67Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Capsicum annuum GN=GGPS1... [more]
BLAST of Cla015797 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K0P7_CUCSA6.8e-17593.13Uncharacterized protein OS=Cucumis sativus GN=Csa_7G017680 PE=3 SV=1[more]
B9H1M5_POPTR1.8e-14380.88Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s18610g PE=3 SV=2[more]
B9HR16_POPTR3.1e-14375.36Geranylgeranyl pyrophosphate synthase family protein OS=Populus trichocarpa GN=P... [more]
W9RIP4_9ROSA1.3e-14176.18Heterodimeric geranylgeranyl pyrophosphate synthase small subunit OS=Morus notab... [more]
B9SUY3_RICCO1.9e-14074.85Geranyl geranyl pyrophosphate synthase, putative OS=Ricinus communis GN=RCOM_137... [more]
BLAST of Cla015797 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659094148|ref|XP_008447910.1|6.1e-17794.33PREDICTED: LOW QUALITY PROTEIN: heterodimeric geranylgeranyl pyrophosphate synth... [more]
gi|449454249|ref|XP_004144868.1|9.8e-17593.13PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, ch... [more]
gi|743792842|ref|XP_011045566.1|4.0e-14481.19PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, ch... [more]
gi|566167266|ref|XP_002306207.2|2.6e-14380.88hypothetical protein POPTR_0004s18610g [Populus trichocarpa][more]
gi|566187928|ref|XP_002312936.2|4.4e-14375.36geranylgeranyl pyrophosphate synthase family protein [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000092Polyprenyl_synt
IPR008949Isoprenoid_synthase_dom_sf
IPR017446Polyprenyl synthetase-related
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008299 isoprenoid biosynthetic process
biological_process GO:0016114 terpenoid biosynthetic process
biological_process GO:0043693 monoterpene biosynthetic process
biological_process GO:0006486 protein glycosylation
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006694 steroid biosynthetic process
cellular_component GO:0005622 intracellular
cellular_component GO:0042651 thylakoid membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0005575 cellular_component
molecular_function GO:0004161 dimethylallyltranstransferase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0016874 ligase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0032440 2-alkenal reductase [NAD(P)] activity
molecular_function GO:0004659 prenyltransferase activity
molecular_function GO:0003674 molecular_function
molecular_function GO:0004337 geranyltranstransferase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU28774watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU44056watermelon EST collection version 2.0transcribed_cluster
WMU56459watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla015797Cla015797.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU28774WMU28774transcribed_cluster
WMU56459WMU56459transcribed_cluster
WMU44056WMU44056transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000092Polyprenyl synthetasePFAMPF00348polyprenyl_syntcoord: 68..299
score: 1.3
IPR000092Polyprenyl synthetasePROSITEPS00723POLYPRENYL_SYNTHASE_1coord: 119..135
scor
IPR008949Isoprenoid synthase domainGENE3DG3DSA:1.10.600.10coord: 39..322
score: 5.1
IPR008949Isoprenoid synthase domainunknownSSF48576Terpenoid synthasescoord: 43..310
score: 2.47
IPR017446Polyprenyl synthetase-relatedPANTHERPTHR12001GERANYLGERANYL PYROPHOSPHATE SYNTHASEcoord: 17..332
score: 1.3E
NoneNo IPR availableunknownCoilCoilcoord: 256..276
score: -coord: 286..306
scor
NoneNo IPR availablePANTHERPTHR12001:SF41HETERODIMERIC GERANYLGERANYL PYROPHOSPHATE SYNTHASE SMALL SUBUNIT, CHLOROPLASTICcoord: 17..332
score: 1.3E

Synteny