Cp4.1LG04g04630 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG04g04630
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionGeranylgeranyl-diphosphate synthase
LocationCp4.1LG04 : 6386949 .. 6390533 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGTCTTACTCATCCATGGCAGATGCTGATGGCCCGCAATTGCGTCGTCTTCCATGTGCTTATCCCTCTCAGACATCCACCGTCCTTTCAGACTCCATTTTTCGACCGCAAAGTTCACAGAGAACAAGAGAGGGAGAGCATCGACGATGGCATTTTCGATCATGGCGGCATCCTCTCTCAGAATGAATTTTGGAACAAAGGCTTCAATTCGATGCTCTTCATCATCTTCTTCTTCTTCAGCGGTTTCTTCTCAAGCCAAATCGATTCAGTTTGATTTGAAAACGTACTGGAAAAAGCTGATTCTCGAGATCAACCAGAAGCTGGATGAAGCTGTTCCCATTCAGTACCCCGACCAGATCTACGAAGCTATGCGTTACTCGGTTTTGGCTAACGGAGCCAAGCGAGCTCCTCCGGTTATGTGCGTCGCCGCCTGTGAGCTCTTCGGCGTCGATCGCCTCGCTGCATTCCCTACCGCCTGTGCTCTCGAAATGGTTCTTTCTCATTCCTAATTTTACGTTTCTGGATTGAGATTCGCTTTAATTCTCGTGTTCTGTTATTTCTTAGGACATTAACGAAGTTTGACTACAAATTGCTCGATTCGAATATTCACTTGCGGTTATGATTTCATGTTTGTGTACATTACGTTTGCTAGTTTCTGTAATAGTTCTTTCAATCGTCTCTAAGTGGTAAGTTACTTAAACTGGCTGTTCATATCAATCTCCAGATGTGAATTAAACTTGTATGTATGAACAGCCAAGTTGATTTGGGAATTAGGTTGGACAAACTTGAGGGATGGGGGGAGGGGGGCGCAACATTTTAGGCTATAAAATACTGTTCAGTTCGCAGTCTGTTACATTGTGCATTCTGGTTTATAGGTCAATGATTCAATACGTTTCAAAACGTGAGTTGATTTCTATTCTCATGTCTGTTAGATGAACACGACTCTCCACAATGATATGATATTGTCCACTTTGAGTCTAAGCTCTCATGGCTTTGCTTTGAGCTTCCCCAAAAGGCCTCACACCAATGGAGAGAGTATTCTTTGTTTATAAAACCATGATCAAATTAGCCGACCTCACGACTCTCCACAATGGTATGATATTGTCACACCAATGGAGAGAGTATTCTTTGTTTATAAACCCATGATCATTCCCTAAATTAGCCGACCTCACACCAATAGAGAGAGTATTCTTTGTTTATAAACCCATGATCATTCCCTAAATTAGCCGATGTGGGACTTCCATCATCCAACACCTCCCCTCGAACAAAGTACGCCTATCCAATACCTCCCCTCGAACAAAGTACGCCTCTCCATAATCGAGGCAAGACTCCAGGAGTCTTTGTCATTTTTTACTGCCTTCGAGGAGGCTCGACTCCTTTTCTTTTGGAGTCCTTTGTTCGACATTTGAGGATTTACCAATCTATTGGCACGACTAAGTTTAGGGCATTGCTCTGATACCATGTTAGATAAACACAACTCTCCACAATTGTGTGATATTGTCCATTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTTCCCAAAAGGCCTCACACCAATGAAGAGAGTATTCTTTGTTTATAAACCCATGATCATTCCCTAAATTAGTTGACGTGGGACTTCCATCATCCAACCATGTCCAAGATTAGTAAAATGTGGGAATTACACTGGCTAGGCTCTAAATGAGTGAAGGGTCGGAAGAATAAATGTGAGAGAACCCTTCAAAGGACTGTGGTTGATAGAGAATTTGATAGAAAACATAAGGCGTCCTCTGCTTGGAAGTGATTTAGATTCGTCATATTCAACACTTCAAAATCAATTTTGATTGGATGAAAAATGTGTTTAAGAGTGTGAAATCAAACATCAAATTGTTTTTGAATAATTATAGGCATGTTTTGAGGTGATTTTGAACATGAAAAAGGTGATTCTTATCCTTTCAAAATCACTTCCAAACTTGTTAGTAGTGTTGGAACATATTCTGTATTATATACACTTTTCCAGTTATGCTTTACTTGTATGCTCTCTTACCTTATACTATATTTGTGCACTTCTCTTTTTCTTGGTTTGGTTAAGGCACGTGCTTTTAATTAAGACGTCAGAGGTTTGAATCTCCCTTCATCTCCACATGTTGTTGAACTATTAAAAAAAACACCCAAATCCGAATTATGTACCTCCCTTCGAATGAAAAACAAGTTATGGCGAGATGCAATGTGAAATCTAACATTCAAGAGTAAAATTAATCACTCTTGAAGACAGTTTTAGCGTTTTAAGAATTGAGAGAGCTTATTGACTCTTTGCGATATCAAAGTCGATGCGGATAACATCATCTCCTTTGTAACAATATACTGCATGTTGCTAGGTTATTCTTAATAGCTCTTGTCACACTTCAAACTAGTGTATTAAATTGATCATTGATCCTTTGGCAGGTTCATGCAGCTTCATTGATCCATGATGACCTTCCTTGCATGGATGACGATCCCTCACGTCGCGGCCAACCTTCAAACCATACAGTTTATGGTGTTGACATGGCAATTCTCGCTGGTGATGCACTTTTTCCCCTTGGCTTTCAACACATTGTCTCACACACACCATTCGACCTCGTTCCCGAGTCCCGCTTGCTCCGTGTGGTTGCCGAGATTGCCAAAGCCGTTGGTTCCAGAGGCATGGCAGCAGGACAGTTTCTTGACCTTGAGGGAGGCCCCAACTCCATCGAATTCGTCCAAGAAAAGAAATTTGGTGAAATGAGCCAATGCTCCGCAGTGTGCGGAGGACTTCTAGCTGGAGCAGAAGACCATGAGGTACAGAGATTGAGAAGGTACGGAAGAGCGGTCGGCGTGTTGTATCAGGTAGTAGACGATATTCGGAAAGAACAAGCAAAGAAACTCGATCAAACCGACGAGAGTAAGAAGAGAAAAGGGAAGAGCTATGTTGGAGTATATGGGATTGAGAAGGCCAAGGAGGTGGCAGAGGAGCTGAGGACCAAAGCAAAGAAGGAATTGGAAGGATTTGAGAAGTATGGAGACCGAGTGATGCCTTTGTACAGCTTTGTGGATTATGCTGCTGATAGGAGTTTCAGTTTAGAAAGTTCAACTTGATGAGAAGAGATCCTAAAACTAGGAGAGTTTACAAGTCCCTTGATATATATAAACTAGAAAGTCCTTTTCTTTGGGAAATATTAAGTCAACACGAACAGGACAGGACGATGTTGAAGAAATCACGGAATCCCGACCCAAGAGCTGGAGAAAAGTTCTCATTAGATCGAGTTAGAGTGGTAAGTTTTATCGATGCGTTGATATTTTCATGATAGTAGAGGTATCAACCAAACAAATATGAATACCAAAAATGAAGTATGAAGAAGAGTTTTTAATACCATTGTCTTGATGTATAGGTAGAGTTGTTATTAAGGTTTACCTTTCTTATTGTCTCGTTGTCTCCGTGTTTTCGATTACTAATGCTATTTTTGAAAGTTTGTGGGTAATTTTTAAACGGTTTCGCCCATTTATTAATGGTGAGGATATCTTTCAACTTTTTAAGGAAGTCTAAGGGTATTAATGAAAATTTTGAAAGTTAAGGAATTAGAAAT

mRNA sequence

CGTCTTACTCATCCATGGCAGATGCTGATGGCCCGCAATTGCGTCGTCTTCCATGTGCTTATCCCTCTCAGACATCCACCGTCCTTTCAGACTCCATTTTTCGACCGCAAAGTTCACAGAGAACAAGAGAGGGAGAGCATCGACGATGGCATTTTCGATCATGGCGGCATCCTCTCTCAGAATGAATTTTGGAACAAAGGCTTCAATTCGATGCTCTTCATCATCTTCTTCTTCTTCAGCGGTTTCTTCTCAAGCCAAATCGATTCAGTTTGATTTGAAAACGTACTGGAAAAAGCTGATTCTCGAGATCAACCAGAAGCTGGATGAAGCTGTTCCCATTCAGTACCCCGACCAGATCTACGAAGCTATGCGTTACTCGGTTTTGGCTAACGGAGCCAAGCGAGCTCCTCCGGTTATGTGCGTCGCCGCCTGTGAGCTCTTCGGCGTCGATCGCCTCGCTGCATTCCCTACCGCCTGTGCTCTCGAAATGGTTCATGCAGCTTCATTGATCCATGATGACCTTCCTTGCATGGATGACGATCCCTCACGTCGCGGCCAACCTTCAAACCATACAGTTTATGGTGTTGACATGGCAATTCTCGCTGGTGATGCACTTTTTCCCCTTGGCTTTCAACACATTGTCTCACACACACCATTCGACCTCGTTCCCGAGTCCCGCTTGCTCCGTGTGGTTGCCGAGATTGCCAAAGCCGTTGGTTCCAGAGGCATGGCAGCAGGACAGTTTCTTGACCTTGAGGGAGGCCCCAACTCCATCGAATTCGTCCAAGAAAAGAAATTTGGTGAAATGAGCCAATGCTCCGCAGTGTGCGGAGGACTTCTAGCTGGAGCAGAAGACCATGAGGTACAGAGATTGAGAAGGTACGGAAGAGCGGTCGGCGTGTTGTATCAGGTAGTAGACGATATTCGGAAAGAACAAGCAAAGAAACTCGATCAAACCGACGAGAGTAAGAAGAGAAAAGGGAAGAGCTATGTTGGAGTATATGGGATTGAGAAGGCCAAGGAGGTGGCAGAGGAGCTGAGGACCAAAGCAAAGAAGGAATTGGAAGGATTTGAGAAGTATGGAGACCGAGTGATGCCTTTGTACAGCTTTGTGGATTATGCTGCTGATAGGAGTTTCAGTTTAGAAAGTTCAACTTGATGAGAAGAGATCCTAAAACTAGGAGAGTTTACAAGTCCCTTGATATATATAAACTAGAAAGTCCTTTTCTTTGGGAAATATTAAGTCAACACGAACAGGACAGGACGATGTTGAAGAAATCACGGAATCCCGACCCAAGAGCTGGAGAAAAGTTCTCATTAGATCGAGTTAGAGTGGTAAGTTTTATCGATGCGTTGATATTTTCATGATAGTAGAGGTATCAACCAAACAAATATGAATACCAAAAATGAAGTATGAAGAAGAGTTTTTAATACCATTGTCTTGATGTATAGGTAGAGTTGTTATTAAGGTTTACCTTTCTTATTGTCTCGTTGTCTCCGTGTTTTCGATTACTAATGCTATTTTTGAAAGTTTGTGGGTAATTTTTAAACGGTTTCGCCCATTTATTAATGGTGAGGATATCTTTCAACTTTTTAAGGAAGTCTAAGGGTATTAATGAAAATTTTGAAAGTTAAGGAATTAGAAAT

Coding sequence (CDS)

ATGTGCTTATCCCTCTCAGACATCCACCGTCCTTTCAGACTCCATTTTTCGACCGCAAAGTTCACAGAGAACAAGAGAGGGAGAGCATCGACGATGGCATTTTCGATCATGGCGGCATCCTCTCTCAGAATGAATTTTGGAACAAAGGCTTCAATTCGATGCTCTTCATCATCTTCTTCTTCTTCAGCGGTTTCTTCTCAAGCCAAATCGATTCAGTTTGATTTGAAAACGTACTGGAAAAAGCTGATTCTCGAGATCAACCAGAAGCTGGATGAAGCTGTTCCCATTCAGTACCCCGACCAGATCTACGAAGCTATGCGTTACTCGGTTTTGGCTAACGGAGCCAAGCGAGCTCCTCCGGTTATGTGCGTCGCCGCCTGTGAGCTCTTCGGCGTCGATCGCCTCGCTGCATTCCCTACCGCCTGTGCTCTCGAAATGGTTCATGCAGCTTCATTGATCCATGATGACCTTCCTTGCATGGATGACGATCCCTCACGTCGCGGCCAACCTTCAAACCATACAGTTTATGGTGTTGACATGGCAATTCTCGCTGGTGATGCACTTTTTCCCCTTGGCTTTCAACACATTGTCTCACACACACCATTCGACCTCGTTCCCGAGTCCCGCTTGCTCCGTGTGGTTGCCGAGATTGCCAAAGCCGTTGGTTCCAGAGGCATGGCAGCAGGACAGTTTCTTGACCTTGAGGGAGGCCCCAACTCCATCGAATTCGTCCAAGAAAAGAAATTTGGTGAAATGAGCCAATGCTCCGCAGTGTGCGGAGGACTTCTAGCTGGAGCAGAAGACCATGAGGTACAGAGATTGAGAAGGTACGGAAGAGCGGTCGGCGTGTTGTATCAGGTAGTAGACGATATTCGGAAAGAACAAGCAAAGAAACTCGATCAAACCGACGAGAGTAAGAAGAGAAAAGGGAAGAGCTATGTTGGAGTATATGGGATTGAGAAGGCCAAGGAGGTGGCAGAGGAGCTGAGGACCAAAGCAAAGAAGGAATTGGAAGGATTTGAGAAGTATGGAGACCGAGTGATGCCTTTGTACAGCTTTGTGGATTATGCTGCTGATAGGAGTTTCAGTTTAGAAAGTTCAACTTGA

Protein sequence

MCLSLSDIHRPFRLHFSTAKFTENKRGRASTMAFSIMAASSLRMNFGTKASIRCSSSSSSSSAVSSQAKSIQFDLKTYWKKLILEINQKLDEAVPIQYPDQIYEAMRYSVLANGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIAKAVGSRGMAAGQFLDLEGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESKKRKGKSYVGVYGIEKAKEVAEELRTKAKKELEGFEKYGDRVMPLYSFVDYAADRSFSLESST
Homology
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BLAST of Cp4.1LG04g04630 vs. Swiss-Prot
Match: GGR_ARATH (Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic OS=Arabidopsis thaliana GN=GGR PE=1 SV=2)

HSP 1 Score: 406.4 bits (1043), Expect = 3.4e-112
Identity = 219/319 (68.65%), Postives = 249/319 (78.06%), Query Frame = 1 

Query: 50  ASIRCSSSSSSSSAVSSQAKSIQFDLKTYWKKLILEINQKLDEAVPIQYPDQIYEAMRYS 109
           A+IR SSSS+  S        + FDL+TYW  LI EINQKLDEA+P+++P  IYEAMRYS
Sbjct: 30  AAIRSSSSSAPGS--------LNFDLRTYWTTLITEINQKLDEAIPVKHPAGIYEAMRYS 89

Query: 110 VLANGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQ 169
           VLA GAKRAPPVMCVAACELFG DRLAAFPTACALEMVHAASLIHDDLPCMDDDP RRG+
Sbjct: 90  VLAQGAKRAPPVMCVAACELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGK 149

Query: 170 PSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIAKAVGSRGMAAG 229
           PSNHTVYG  MAILAGDALFPL FQHIVSHTP DLVP + +LR++ EIA+ VGS GMAAG
Sbjct: 150 PSNHTVYGSGMAILAGDALFPLAFQHIVSHTPPDLVPRATILRLITEIARTVGSTGMAAG 209

Query: 230 QFLDLEGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQVVD 289
           Q++DLEGGP  + FVQEKKFG M +CSAVCGGLL GA + E+Q LRRYGRAVG+LYQVVD
Sbjct: 210 QYVDLEGGPFPLSFVQEKKFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVD 269

Query: 290 DIRKEQAKKLDQTDESKKRKGKSYVGVYGIEKA-KEVAEELRTKAKKELEGFE-KY--GD 349
           DI ++              K KSY G  G EK   E+AEEL+ KAKKEL+ F+ KY  GD
Sbjct: 270 DITED--------------KKKSYDG--GAEKGMMEMAEELKEKAKKELQVFDNKYGGGD 324

Query: 350 RVMPLYSFVDYAADRSFSL 365
            ++PLY+FVDYAA R F L
Sbjct: 330 TLVPLYTFVDYAAHRHFLL 324

[Close]
BLAST of Cp4.1LG04g04630 vs. Swiss-Prot
Match: GGPP1_ARATH (Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic OS=Arabidopsis thaliana GN=GGPPS1 PE=1 SV=2)

HSP 1 Score: 254.6 bits (649), Expect = 1.7e-66
Identity = 148/340 (43.53%), Postives = 212/340 (62.35%), Query Frame = 1 

Query: 44  MNFGTKASIRCSSSSSSSSAVSS-----QAKSIQFDLKTYWKKLILEINQKLDEAVPIQY 103
           ++F +K ++  SSS  SSS V+      Q++   FD  +Y       +N+ LD AVP++ 
Sbjct: 40  ISFRSKRTVSSSSSIVSSSVVTKEDNLRQSEPSSFDFMSYIITKAELVNKALDSAVPLRE 99

Query: 104 PDQIYEAMRYSVLANGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASLIHDDLP 163
           P +I+EAMRYS+LA G KR  PV+C+AACEL G +   A P ACA+EM+H  SLIHDDLP
Sbjct: 100 PLKIHEAMRYSLLAGG-KRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLP 159

Query: 164 CMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIA 223
           CMD+D  RRG+P+NH V+G D+A+LAGDAL    F+H+ S T  D+V   R++R V E+A
Sbjct: 160 CMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGELA 219

Query: 224 KAVGSRGMAAGQFLDL--EG------GPNSIEFVQEKKFGEMSQCSAVCGGLLAGAEDHE 283
           KA+G+ G+ AGQ +D+  EG      G   +EF+   K   + + SAV G ++ G  D E
Sbjct: 220 KAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDE 279

Query: 284 VQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESK---KRKGK-------SYVGVYGIE 343
           ++RLR++ R +G+L+QVVDDI       LD T  SK   K  GK       +Y  + G+E
Sbjct: 280 IERLRKFARCIGLLFQVVDDI-------LDVTKSSKELGKTAGKDLIADKLTYPKIMGLE 339

Query: 344 KAKEVAEELRTKAKKELEGFEKYGDRVMPLYSFVDYAADR 361
           K++E AE+L  +A+ +L GF+   D+V PL +  +Y A R
Sbjct: 340 KSREFAEKLNREARDQLLGFD--SDKVAPLLALANYIAYR 369

[Close]
BLAST of Cp4.1LG04g04630 vs. Swiss-Prot
Match: GGPPS_SINAL (Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis alba GN=GGPS1 PE=1 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.7e-66
Identity = 146/331 (44.11%), Postives = 211/331 (63.75%), Query Frame = 1 

Query: 53  RCSSSSSSSSAVSSQ-----AKSIQFDLKTYWKKLILEINQKLDEAVPIQYPDQIYEAMR 112
           R  SSSSSSS ++ +     + S  FD  +Y  +    +N+ LD AVP++ P +I+EAMR
Sbjct: 45  RTVSSSSSSSLITKEDNNLKSSSSSFDFMSYIIRKADSVNKALDSAVPLREPLKIHEAMR 104

Query: 113 YSVLANGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRR 172
           YS+LA G KR  PV+C+AACEL G +   A P  CA+EM+H  SLIHDDLPCMD+D  RR
Sbjct: 105 YSLLAGG-KRVRPVLCIAACELVGGEESLAMPARCAVEMIHTMSLIHDDLPCMDNDDLRR 164

Query: 173 GQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIAKAVGSRGMA 232
           G+P+NH VYG D+A+LAGDAL    F+H+ S T  ++ P +R++R V E+AKA+G+ G+ 
Sbjct: 165 GKPTNHKVYGEDVAVLAGDALLSFAFEHLASATSSEVSP-ARVVRAVGELAKAIGTEGLV 224

Query: 233 AGQFLDL--EG------GPNSIEFVQEKKFGEMSQCSAVCGGLLAGAEDHEVQRLRRYGR 292
           AGQ +D+  EG      G   ++F+   K   + + SAV GG++ G  D E++RLR++ R
Sbjct: 225 AGQVVDISSEGLDLNNVGLEHLKFIHLHKTAALLEASAVLGGIIGGGSDEEIERLRKFAR 284

Query: 293 AVGVLYQVVDDIRKEQAKKLDQTDESK---KRKGK-------SYVGVYGIEKAKEVAEEL 352
            +G+L+QVVDDI       LD T  S+   K  GK       +Y  + G+EK++E AE+L
Sbjct: 285 CIGLLFQVVDDI-------LDVTKSSQELGKTAGKDLIADKLTYPKLMGLEKSREFAEKL 344

Query: 353 RTKAKKELEGFEKYGDRVMPLYSFVDYAADR 361
            T+A+ +L GF+   D+V PL +  +Y A+R
Sbjct: 345 NTEARDQLLGFD--SDKVAPLLALANYIANR 364

[Close]
BLAST of Cp4.1LG04g04630 vs. Swiss-Prot
Match: GGPPS_CAPAN (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Capsicum annuum GN=GGPS1 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.2e-61
Identity = 134/304 (44.08%), Postives = 192/304 (63.16%), Query Frame = 1 

Query: 73  FDLKTYWKKLILEINQKLDEAVPIQYPDQIYEAMRYSVLANGAKRAPPVMCVAACELFGV 132
           F+ K Y  +  + +N+ LDEA+ ++ P  I+EAMRYS+LA G KR  P++C+AACEL G 
Sbjct: 76  FNFKIYVTEKAISVNKALDEAIIVKEPHVIHEAMRYSLLAGG-KRVRPMLCLAACELVGG 135

Query: 133 DRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLG 192
           ++  A   ACA+EM+H  SLIHDDLPCMD+D  RRG+P+NH +YG D+A+LAGD+L    
Sbjct: 136 NQENAMAAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDSLLAFA 195

Query: 193 FQHIVSHTPFDLVPESRLLRVVAEIAKAVGSRGMAAGQFLDLEGGPN------SIEFVQE 252
           F+HIV+ T    V  SR++  VAE+AK++G+ G+ AGQ  D++   N      ++EF+  
Sbjct: 196 FEHIVNSTAG--VTPSRIVGAVAELAKSIGTEGLVAGQVADIKCTGNASVSLETLEFIHV 255

Query: 253 KKFGEMSQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESK 312
            K   + + S V G +L G  + EV++LRR+ R +G+L+QVVDDI       LD T  S+
Sbjct: 256 HKTAALLESSVVLGAILGGGTNVEVEKLRRFARCIGLLFQVVDDI-------LDVTKSSE 315

Query: 313 ---KRKGK-------SYVGVYGIEKAKEVAEELRTKAKKELEGFEKYGDRVMPLYSFVDY 361
              K  GK       +Y  + G+EKAKE A EL  +AK++LEGF+    +  PL +  DY
Sbjct: 316 ELGKTAGKDLVVDKTTYPKLLGLEKAKEFAAELNREAKQQLEGFD--SRKAAPLIALADY 367

[Close]
BLAST of Cp4.1LG04g04630 vs. Swiss-Prot
Match: GGPPB_ARATH (Geranylgeranyl pyrophosphate synthase 11, chloroplastic OS=Arabidopsis thaliana GN=At3g29430 PE=2 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.1e-61
Identity = 136/328 (41.46%), Postives = 200/328 (60.98%), Query Frame = 1 

Query: 48  TKASIRCSSSSSSSSAVSSQAKSIQ----FDLKTYWKKLILEINQKLDEAVPIQYPDQIY 107
           T  S+ C+ SS     +  + KS      FD K+Y  +    ++  L+ +VP+Q P  I 
Sbjct: 32  TVLSLSCALSSQGGDMIPPEGKSNDRNSAFDFKSYMIRKAESVSAALNVSVPLQEPLTIQ 91

Query: 108 EAMRYSVLANGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASLIHDDLPCMDDD 167
           EA+RYS+LA G KR  P++C+AACEL G D   A   ACA+EM+H +SLIHDDLPCMDD 
Sbjct: 92  EAVRYSLLAGG-KRVRPLLCIAACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDA 151

Query: 168 PSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIAKAVGS 227
             RRG+P+NH  +G DMA+LAGDAL  L F+H ++     LV   R++R V E+AKA+G+
Sbjct: 152 DLRRGKPTNHKEFGEDMAVLAGDALLALAFEH-MTFVSNGLVAPERMIRAVMELAKAIGT 211

Query: 228 RGMAAGQFLDL--------EGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGAEDHEVQRLR 287
           +G+ AGQ  DL        + G   +EF+   K   + + +AV G ++ G  + E+++LR
Sbjct: 212 KGLVAGQVTDLCSQGLNPDDVGLERLEFIHLHKTAALLEAAAVLGAIMGGGTEEEIEKLR 271

Query: 288 RYGRAVGVLYQVVDDIR--KEQAKKLDQTDESKKRKGK-SYVGVYGIEKAKEVAEELRTK 347
           +Y R +G+L+QVVDDI    E  K+L +T       GK +Y  + G+E+++EVAE+LR +
Sbjct: 272 KYARCIGLLFQVVDDILDVTESTKELGKTAGKDVMAGKLTYPRLIGLERSREVAEKLRRE 331

Query: 348 AKKELEGFEKYGDRVMPLYSFVDYAADR 361
           A ++L GF+   D+  PL +   Y A R
Sbjct: 332 AAEQLLGFD--SDKAAPLVALASYIACR 355

[Close]
BLAST of Cp4.1LG04g04630 vs. TrEMBL
Match: A0A0A0K0P7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G017680 PE=3 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 3.1e-165
Identity = 301/337 (89.32%), Postives = 317/337 (94.07%), Query Frame = 1 

Query: 32  MAFSIMAASSLRMNFGTKASIRCSSSSSSSSAVSSQAKSIQFDLKTYWKKLILEINQKLD 91
           MAFS+MAASSL  +F  K  IRCSSSSS   A+SSQ +SI FDLKTYWK+LILEINQKLD
Sbjct: 1   MAFSLMAASSLTTSFQRKTPIRCSSSSSP--ALSSQPQSIHFDLKTYWKQLILEINQKLD 60

Query: 92  EAVPIQYPDQIYEAMRYSVLANGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAAS 151
           EAVP+QYPDQIYEAMRYSVLA GAKRAPPVMCVAACELFGVDRLAAFPTACALEMVH AS
Sbjct: 61  EAVPLQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEAS 120

Query: 152 LIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLL 211
           LIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLL
Sbjct: 121 LIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLL 180

Query: 212 RVVAEIAKAVGSRGMAAGQFLDLEGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGAEDHEV 271
           RVVAEIA+AVGSRGMAAGQFLDLEGGPNS+EFVQEKKFGEM+QCSAVCGGLLAGAEDHE+
Sbjct: 181 RVVAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEMAQCSAVCGGLLAGAEDHEI 240

Query: 272 QRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESKKRKGKSYVGVYGIEKAKEVAEELRT 331
           QRLRRYGRAVGVLYQVVDDI +EQ+KKLD TDESK+ KGKSYV VYGIEKAKEVAEELR 
Sbjct: 241 QRLRRYGRAVGVLYQVVDDILEEQSKKLDYTDESKRSKGKSYVEVYGIEKAKEVAEELRA 300

Query: 332 KAKKELEGFEKYGDRVMPLYSFVDYAADRSFSLESST 369
           KAK ELEGFEKYGD+VMPLYSFVDYAADRSFS E+S+
Sbjct: 301 KAKNELEGFEKYGDQVMPLYSFVDYAADRSFSFETSS 335

[Close]
BLAST of Cp4.1LG04g04630 vs. TrEMBL
Match: B9H1M5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s18610g PE=3 SV=2)

HSP 1 Score: 506.5 bits (1303), Expect = 2.7e-140
Identity = 255/321 (79.44%), Postives = 281/321 (87.54%), Query Frame = 1 

Query: 47  GTKASIRCSSSSSSSSAVSSQAKSIQFDLKTYWKKLILEINQKLDEAVPIQYPDQIYEAM 106
           G  + I+CS S      VSSQ+K+ QFDLKTYW  LI EINQ+LD+AVPIQYPD+IYEAM
Sbjct: 32  GKMSKIQCSLS------VSSQSKTAQFDLKTYWTTLIGEINQELDQAVPIQYPDKIYEAM 91

Query: 107 RYSVLANGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSR 166
           RYSVLA GAKRAPPVMCVAACELFG +RLAAFPTACALEMVHAASLIHDDLPCMDDDPSR
Sbjct: 92  RYSVLAKGAKRAPPVMCVAACELFGGNRLAAFPTACALEMVHAASLIHDDLPCMDDDPSR 151

Query: 167 RGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIAKAVGSRGM 226
           RGQPSNHT+YGVDMAILAGDALFPLGF HIVS TP DLVPE RLLRV+AEIA+AVGSRGM
Sbjct: 152 RGQPSNHTIYGVDMAILAGDALFPLGFSHIVSQTPSDLVPEPRLLRVIAEIARAVGSRGM 211

Query: 227 AAGQFLDLEGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQ 286
           AAGQFLDLEGGPN++EFVQEKK+GEM +CSAVCGGLLAGA D E++RLRRYGRAVGVLYQ
Sbjct: 212 AAGQFLDLEGGPNAVEFVQEKKYGEMGECSAVCGGLLAGATDDEIRRLRRYGRAVGVLYQ 271

Query: 287 VVDDIRKEQAKKLDQTDESKKRKGKSYVGVYGIEKAKEVAEELRTKAKKELEGFEKYGDR 346
           VVDDI + +  K    +E K++KGKSYV VYG+EKA EVAEELR KAKKEL+GFEKYG+ 
Sbjct: 272 VVDDILEAKTMKSKLDEEEKRKKGKSYVAVYGVEKATEVAEELRAKAKKELDGFEKYGES 331

Query: 347 VMPLYSFVDYAADRSFSLESS 368
           V+PLYSFVDYAADR FS   S
Sbjct: 332 VVPLYSFVDYAADRGFSFGES 346

[Close]
BLAST of Cp4.1LG04g04630 vs. TrEMBL
Match: B9HR16_POPTR (Geranylgeranyl pyrophosphate synthase family protein OS=Populus trichocarpa GN=POPTR_0009s14150g PE=3 SV=2)

HSP 1 Score: 503.4 bits (1295), Expect = 2.3e-139
Identity = 249/308 (80.84%), Postives = 276/308 (89.61%), Query Frame = 1 

Query: 61  SSAVSSQAKSIQFDLKTYWKKLILEINQKLDEAVPIQYPDQIYEAMRYSVLANGAKRAPP 120
           S +VS+ +K+ QFDLKTYW  LILEINQKLD+AVPIQYPD+IYEAMRYSVLA GAKRAPP
Sbjct: 38  SLSVSTHSKTPQFDLKTYWTTLILEINQKLDQAVPIQYPDKIYEAMRYSVLAKGAKRAPP 97

Query: 121 VMCVAACELFGVDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDM 180
           VMCVAACELFG +R AAFPTACALEMVH+ASLIHDDLPCMDDDPSRRGQPSNH +YGVDM
Sbjct: 98  VMCVAACELFGGNRHAAFPTACALEMVHSASLIHDDLPCMDDDPSRRGQPSNHKIYGVDM 157

Query: 181 AILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIAKAVGSRGMAAGQFLDLEGGPNS 240
           AILAGDALFPLGF+HIVSHTP DLVPE RLL V+AEIA+AVGS GMAAGQFLDLEGGPNS
Sbjct: 158 AILAGDALFPLGFRHIVSHTPSDLVPEPRLLSVIAEIARAVGSTGMAAGQFLDLEGGPNS 217

Query: 241 IEFVQEKKFGEMSQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLD 300
           +EFVQEKKFGEM +CSAVCGGLLAGA+D E+QRLRRYGRAVGVLYQVVDDI + +  K  
Sbjct: 218 VEFVQEKKFGEMGECSAVCGGLLAGAKDDEIQRLRRYGRAVGVLYQVVDDILEAKTMKSK 277

Query: 301 QTDESKKRKGKSYVGVYGIEKAKEVAEELRTKAKKELEGFEKYGDRVMPLYSFVDYAADR 360
             ++ KKRKGKSYV +YG+EKA EVAEELR KAK+EL+GFEKYG+ V+PLYSFVDYAADR
Sbjct: 278 VDEDKKKRKGKSYVALYGVEKAIEVAEELRAKAKEELDGFEKYGESVLPLYSFVDYAADR 337

Query: 361 SFSLESST 369
            FS   S+
Sbjct: 338 GFSFGESS 345

[Close]
BLAST of Cp4.1LG04g04630 vs. TrEMBL
Match: B9SUY3_RICCO (Geranyl geranyl pyrophosphate synthase, putative OS=Ricinus communis GN=RCOM_1373490 PE=3 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 1.9e-138
Identity = 248/313 (79.23%), Postives = 280/313 (89.46%), Query Frame = 1 

Query: 52  IRCSSSSSSSSAVSSQAKSIQFDLKTYWKKLILEINQKLDEAVPIQYPDQIYEAMRYSVL 111
           I+C S + S   VSSQ+KS QFDLKTYW  LI EINQKLD+A+P+Q+P+QIYEAMRYS L
Sbjct: 34  IQCCSPTVS---VSSQSKSTQFDLKTYWTTLIAEINQKLDQAIPVQFPEQIYEAMRYSAL 93

Query: 112 ANGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPS 171
           A GAKRAPPVMCVAACELFG +RLAAFPTACALEMVH ASLIHDDLPCMDDDPSRRGQPS
Sbjct: 94  AKGAKRAPPVMCVAACELFGGNRLAAFPTACALEMVHTASLIHDDLPCMDDDPSRRGQPS 153

Query: 172 NHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIAKAVGSRGMAAGQF 231
           NHT+YGVDMAILAGDALFPLG++HIVSHTP  LVPE RLLRV+AEIA+AVGS GMAAGQF
Sbjct: 154 NHTIYGVDMAILAGDALFPLGYRHIVSHTPTGLVPEPRLLRVIAEIARAVGSTGMAAGQF 213

Query: 232 LDLEGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQVVDDI 291
           LDLEGGP+ +EF QEKK+GEMS+CSAVCGGLLAGAED E+QRLRRYGRAVGVLYQV+DD+
Sbjct: 214 LDLEGGPSFVEFAQEKKYGEMSECSAVCGGLLAGAEDDEIQRLRRYGRAVGVLYQVIDDV 273

Query: 292 RKEQAKKLDQTDESKKRKGKSYVGVYGIEKAKEVAEELRTKAKKELEGFEKYGDRVMPLY 351
              +AK +++ +E K+R GKSYV +YGIEKA EVAEELRT+AKKEL+GF KYGD VMPLY
Sbjct: 274 L--EAKAMNKENEEKRRNGKSYVSLYGIEKAMEVAEELRTQAKKELDGFAKYGDSVMPLY 333

Query: 352 SFVDYAADRSFSL 365
           SFVDYAADR F++
Sbjct: 334 SFVDYAADRGFTI 341

[Close]
BLAST of Cp4.1LG04g04630 vs. TrEMBL
Match: W9RIP4_9ROSA (Heterodimeric geranylgeranyl pyrophosphate synthase small subunit OS=Morus notabilis GN=L484_001146 PE=3 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 5.6e-138
Identity = 256/342 (74.85%), Postives = 296/342 (86.55%), Query Frame = 1 

Query: 32  MAFSIMAASS---LRMNFGTKASIRCSSSSSSSSAVSSQAKSIQFDLKTYWKKLILEINQ 91
           MAFS++++SS   L M   +   +RCSS+S     VSS+++S+QFDLK YW  LI EI+Q
Sbjct: 1   MAFSVLSSSSHLCLPMKPRSFIPVRCSSAS-----VSSRSRSLQFDLKKYWTTLITEIDQ 60

Query: 92  KLDEAVPIQYPDQIYEAMRYSVLANGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVH 151
           KLDEA+P++YP+ IY AMRYS LA GAKRAPPVMCVAACEL G DRLAAFPTACALEMVH
Sbjct: 61  KLDEAIPVKYPEHIYHAMRYSALAEGAKRAPPVMCVAACELLGGDRLAAFPTACALEMVH 120

Query: 152 AASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPES 211
           AASLIHDDLPCMDDD SRRG+PSNHT+YGVD+AILAGDALFPLGF+HIVSHTP DLVPE 
Sbjct: 121 AASLIHDDLPCMDDDTSRRGKPSNHTIYGVDLAILAGDALFPLGFRHIVSHTPSDLVPEP 180

Query: 212 RLLRVVAEIAKAVGSRGMAAGQFLDLEGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGAED 271
           R+LRV+AEIA+AVGS GMAAGQF+DLEGGPNSIEFVQEKKFGEM +CSAVCGGLLAGA D
Sbjct: 181 RVLRVIAEIARAVGSTGMAAGQFVDLEGGPNSIEFVQEKKFGEMGECSAVCGGLLAGAND 240

Query: 272 HEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDES-KKRKGKSYVGVYGIEKAKEVAE 331
            E+QRLRRYGRAVGVLYQVVDDI +E++KK  +TD + +K+KGKSYV VYG+EKA EVAE
Sbjct: 241 EEIQRLRRYGRAVGVLYQVVDDILEEKSKKGHETDSAERKKKGKSYVEVYGVEKAMEVAE 300

Query: 332 ELRTKAKKELEGFE-KYGDRVMPLYSFVDYAADRSFSLESST 369
           ELR KAK+EL+GFE KYGD  +PLYSFVDYA DR FS+ +S+
Sbjct: 301 ELRAKAKQELDGFEKKYGDSAVPLYSFVDYAVDRGFSIGNSS 337

[Close]
BLAST of Cp4.1LG04g04630 vs. TAIR10
Match: AT4G38460.1 (AT4G38460.1 geranylgeranyl reductase)

HSP 1 Score: 406.4 bits (1043), Expect = 1.9e-113
Identity = 219/319 (68.65%), Postives = 249/319 (78.06%), Query Frame = 1 

Query: 50  ASIRCSSSSSSSSAVSSQAKSIQFDLKTYWKKLILEINQKLDEAVPIQYPDQIYEAMRYS 109
           A+IR SSSS+  S        + FDL+TYW  LI EINQKLDEA+P+++P  IYEAMRYS
Sbjct: 30  AAIRSSSSSAPGS--------LNFDLRTYWTTLITEINQKLDEAIPVKHPAGIYEAMRYS 89

Query: 110 VLANGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQ 169
           VLA GAKRAPPVMCVAACELFG DRLAAFPTACALEMVHAASLIHDDLPCMDDDP RRG+
Sbjct: 90  VLAQGAKRAPPVMCVAACELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGK 149

Query: 170 PSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIAKAVGSRGMAAG 229
           PSNHTVYG  MAILAGDALFPL FQHIVSHTP DLVP + +LR++ EIA+ VGS GMAAG
Sbjct: 150 PSNHTVYGSGMAILAGDALFPLAFQHIVSHTPPDLVPRATILRLITEIARTVGSTGMAAG 209

Query: 230 QFLDLEGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQVVD 289
           Q++DLEGGP  + FVQEKKFG M +CSAVCGGLL GA + E+Q LRRYGRAVG+LYQVVD
Sbjct: 210 QYVDLEGGPFPLSFVQEKKFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVD 269

Query: 290 DIRKEQAKKLDQTDESKKRKGKSYVGVYGIEKA-KEVAEELRTKAKKELEGFE-KY--GD 349
           DI ++              K KSY G  G EK   E+AEEL+ KAKKEL+ F+ KY  GD
Sbjct: 270 DITED--------------KKKSYDG--GAEKGMMEMAEELKEKAKKELQVFDNKYGGGD 324

Query: 350 RVMPLYSFVDYAADRSFSL 365
            ++PLY+FVDYAA R F L
Sbjct: 330 TLVPLYTFVDYAAHRHFLL 324

[Close]
BLAST of Cp4.1LG04g04630 vs. TAIR10
Match: AT4G36810.1 (AT4G36810.1 geranylgeranyl pyrophosphate synthase 1)

HSP 1 Score: 254.6 bits (649), Expect = 9.3e-68
Identity = 148/340 (43.53%), Postives = 212/340 (62.35%), Query Frame = 1 

Query: 44  MNFGTKASIRCSSSSSSSSAVSS-----QAKSIQFDLKTYWKKLILEINQKLDEAVPIQY 103
           ++F +K ++  SSS  SSS V+      Q++   FD  +Y       +N+ LD AVP++ 
Sbjct: 40  ISFRSKRTVSSSSSIVSSSVVTKEDNLRQSEPSSFDFMSYIITKAELVNKALDSAVPLRE 99

Query: 104 PDQIYEAMRYSVLANGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASLIHDDLP 163
           P +I+EAMRYS+LA G KR  PV+C+AACEL G +   A P ACA+EM+H  SLIHDDLP
Sbjct: 100 PLKIHEAMRYSLLAGG-KRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLP 159

Query: 164 CMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIA 223
           CMD+D  RRG+P+NH V+G D+A+LAGDAL    F+H+ S T  D+V   R++R V E+A
Sbjct: 160 CMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGELA 219

Query: 224 KAVGSRGMAAGQFLDL--EG------GPNSIEFVQEKKFGEMSQCSAVCGGLLAGAEDHE 283
           KA+G+ G+ AGQ +D+  EG      G   +EF+   K   + + SAV G ++ G  D E
Sbjct: 220 KAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDE 279

Query: 284 VQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESK---KRKGK-------SYVGVYGIE 343
           ++RLR++ R +G+L+QVVDDI       LD T  SK   K  GK       +Y  + G+E
Sbjct: 280 IERLRKFARCIGLLFQVVDDI-------LDVTKSSKELGKTAGKDLIADKLTYPKIMGLE 339

Query: 344 KAKEVAEELRTKAKKELEGFEKYGDRVMPLYSFVDYAADR 361
           K++E AE+L  +A+ +L GF+   D+V PL +  +Y A R
Sbjct: 340 KSREFAEKLNREARDQLLGFD--SDKVAPLLALANYIAYR 369

[Close]
BLAST of Cp4.1LG04g04630 vs. TAIR10
Match: AT3G29430.1 (AT3G29430.1 Terpenoid synthases superfamily protein)

HSP 1 Score: 237.7 bits (605), Expect = 1.2e-62
Identity = 136/328 (41.46%), Postives = 200/328 (60.98%), Query Frame = 1 

Query: 48  TKASIRCSSSSSSSSAVSSQAKSIQ----FDLKTYWKKLILEINQKLDEAVPIQYPDQIY 107
           T  S+ C+ SS     +  + KS      FD K+Y  +    ++  L+ +VP+Q P  I 
Sbjct: 32  TVLSLSCALSSQGGDMIPPEGKSNDRNSAFDFKSYMIRKAESVSAALNVSVPLQEPLTIQ 91

Query: 108 EAMRYSVLANGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASLIHDDLPCMDDD 167
           EA+RYS+LA G KR  P++C+AACEL G D   A   ACA+EM+H +SLIHDDLPCMDD 
Sbjct: 92  EAVRYSLLAGG-KRVRPLLCIAACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDA 151

Query: 168 PSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIAKAVGS 227
             RRG+P+NH  +G DMA+LAGDAL  L F+H ++     LV   R++R V E+AKA+G+
Sbjct: 152 DLRRGKPTNHKEFGEDMAVLAGDALLALAFEH-MTFVSNGLVAPERMIRAVMELAKAIGT 211

Query: 228 RGMAAGQFLDL--------EGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGAEDHEVQRLR 287
           +G+ AGQ  DL        + G   +EF+   K   + + +AV G ++ G  + E+++LR
Sbjct: 212 KGLVAGQVTDLCSQGLNPDDVGLERLEFIHLHKTAALLEAAAVLGAIMGGGTEEEIEKLR 271

Query: 288 RYGRAVGVLYQVVDDIR--KEQAKKLDQTDESKKRKGK-SYVGVYGIEKAKEVAEELRTK 347
           +Y R +G+L+QVVDDI    E  K+L +T       GK +Y  + G+E+++EVAE+LR +
Sbjct: 272 KYARCIGLLFQVVDDILDVTESTKELGKTAGKDVMAGKLTYPRLIGLERSREVAEKLRRE 331

Query: 348 AKKELEGFEKYGDRVMPLYSFVDYAADR 361
           A ++L GF+   D+  PL +   Y A R
Sbjct: 332 AAEQLLGFD--SDKAAPLVALASYIACR 355

[Close]
BLAST of Cp4.1LG04g04630 vs. TAIR10
Match: AT2G18620.1 (AT2G18620.1 Terpenoid synthases superfamily protein)

HSP 1 Score: 236.9 bits (603), Expect = 2.0e-62
Identity = 130/306 (42.48%), Postives = 189/306 (61.76%), Query Frame = 1 

Query: 73  FDLKTYWKKLILEINQKLDEAVPIQYPDQIYEAMRYSVLANGAKRAPPVMCVAACELFGV 132
           FD  +Y       +N+ LD AV ++ P +I+EA+RYS+LA G KR  PV+C+AACEL G 
Sbjct: 53  FDFTSYMIGKANAVNEALDSAVSLREPIKIHEAIRYSLLARG-KRVRPVLCIAACELVGG 112

Query: 133 DRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLG 192
           +   A P ACA+EM+H  SLIHDDLPCMD+D  RRG+P+NH V+G D+A+LAGDAL    
Sbjct: 113 EESVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFA 172

Query: 193 FQHIVSHTPFDLVPESRLLRVVAEIAKAVGSRGMAAGQFLDLEGGP--------NSIEFV 252
           F+H+ + T    V  +R++R + E+AKA+GS+G+ AGQ +DL  G           +EF+
Sbjct: 173 FEHLATST---AVSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFI 232

Query: 253 QEKKFGEMSQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDE 312
              K   + + + V G ++ G  D EV++LRR+ R +G+L+QVVDDI       LD T  
Sbjct: 233 HVHKTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDI-------LDVTKS 292

Query: 313 SK---KRKGK-------SYVGVYGIEKAKEVAEELRTKAKKELEGFEKYGDRVMPLYSFV 361
           S+   K  GK       +Y  + G+EK+K+ A++L + A ++L GF+    RV PL +  
Sbjct: 293 SEELGKTAGKDLIADKLTYPKLMGLEKSKDFADKLLSDAHEQLHGFD--SSRVKPLLALA 345

[Close]
BLAST of Cp4.1LG04g04630 vs. TAIR10
Match: AT3G32040.1 (AT3G32040.1 Terpenoid synthases superfamily protein)

HSP 1 Score: 233.4 bits (594), Expect = 2.2e-61
Identity = 143/367 (38.96%), Postives = 217/367 (59.13%), Query Frame = 1 

Query: 14  LHFSTAKFTENKRGRASTMAFSIMAASSLRMNFGTKASIRCSSSSSSSSAV-----SSQA 73
           +H S++      RGR      SI++ ++L+    T  S+ C+ +S     +      S  
Sbjct: 5   VHLSSSSLFIQTRGRKYN---SILSFNNLQKR--TVLSLSCALTSQGGKDMIPPKGKSND 64

Query: 74  KSIQFDLKTYWKKLILEINQKLDEAVPIQYPDQIYEAMRYSVLANGAKRAPPVMCVAACE 133
           ++  FD K+Y  +    ++  L+ +VP Q P  I EA+RYS+LA G KR  P++C+AACE
Sbjct: 65  RNFAFDFKSYMIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLAGG-KRVRPLLCIAACE 124

Query: 134 LFGVDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDAL 193
           L G D   A   ACA+EM+H +SLIHDDLPCMDD   RRG+P+NH V+G  MA+LAGDAL
Sbjct: 125 LVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGDAL 184

Query: 194 FPLGFQHIVSHTPFDLVPESRLLRVVAEIAKAVGSRGMAAGQFLDL--------EGGPNS 253
             L F+H+   +   + PE R++R V E+AKA+G++G+ AGQ  DL        + G   
Sbjct: 185 LALAFEHMTVVSSGLVAPE-RMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLER 244

Query: 254 IEFVQEKKFGEMSQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLD 313
           +EF+   K   + + +AV G ++ G  + E+Q+LR+YGR +G+L+QVVDDI        +
Sbjct: 245 LEFIHLHKTAALLEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDI----IDVTE 304

Query: 314 QTDESKKRKGK-------SYVGVYGIEKAKEVAEELRTKAKKELEGFEKYGDRVMPLYSF 361
            T+E  K  GK       +Y  + G+E+++EVAE+LR +A ++L GF+   ++V PL + 
Sbjct: 305 STEELGKTAGKDVMARKLTYPRLIGLERSREVAEKLRREAAEQLLGFD--SNKVAPLVAL 358

[Close]
BLAST of Cp4.1LG04g04630 vs. NCBI nr
Match: gi|659094148|ref|XP_008447910.1| (PREDICTED: LOW QUALITY PROTEIN: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic [Cucumis melo])

HSP 1 Score: 592.8 bits (1527), Expect = 4.1e-166
Identity = 303/337 (89.91%), Postives = 320/337 (94.96%), Query Frame = 1 

Query: 32  MAFSIMAASSLRMNFGTKASIRCSSSSSSSSAVSSQAKSIQFDLKTYWKKLILEINQKLD 91
           MAFS+MAASSL  +FG K  IRCSSS  SSSA+SSQ KS+ FDLKTYWK+LILEINQKLD
Sbjct: 1   MAFSLMAASSLSTSFGRKTPIRCSSS--SSSALSSQTKSLHFDLKTYWKQLILEINQKLD 60

Query: 92  EAVPIQYPDQIYEAMRYSVLANGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAAS 151
           EAV IQYP+QIYEAMRYSVLA GAKRAPPVMCVAACELFGVDRLAAFPTACALEMVH AS
Sbjct: 61  EAVLIQYPEQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEAS 120

Query: 152 LIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLL 211
           LIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLL
Sbjct: 121 LIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLL 180

Query: 212 RVVAEIAKAVGSRGMAAGQFLDLEGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGAEDHEV 271
           RVVAEIA+AVGSRGMAAGQFLDLEGGPNS+EFVQ KKFGEM+QCSAVCGGLLAGAED E+
Sbjct: 181 RVVAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQXKKFGEMAQCSAVCGGLLAGAEDPEI 240

Query: 272 QRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESKKRKGKSYVGVYGIEKAKEVAEELRT 331
           QRLRRYGRAVGVLYQVVDDI +EQ+KKLD+T+ESK+RKGKSYVGVYGIEKAKEVAEELRT
Sbjct: 241 QRLRRYGRAVGVLYQVVDDILEEQSKKLDETNESKRRKGKSYVGVYGIEKAKEVAEELRT 300

Query: 332 KAKKELEGFEKYGDRVMPLYSFVDYAADRSFSLESST 369
           KAK ELEGFEKYGDRVMPLYSFVDYAADRSFS E+S+
Sbjct: 301 KAKNELEGFEKYGDRVMPLYSFVDYAADRSFSFETSS 335

[Close]
BLAST of Cp4.1LG04g04630 vs. NCBI nr
Match: gi|449454249|ref|XP_004144868.1| (PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 589.3 bits (1518), Expect = 4.5e-165
Identity = 301/337 (89.32%), Postives = 317/337 (94.07%), Query Frame = 1 

Query: 32  MAFSIMAASSLRMNFGTKASIRCSSSSSSSSAVSSQAKSIQFDLKTYWKKLILEINQKLD 91
           MAFS+MAASSL  +F  K  IRCSSSSS   A+SSQ +SI FDLKTYWK+LILEINQKLD
Sbjct: 1   MAFSLMAASSLTTSFQRKTPIRCSSSSSP--ALSSQPQSIHFDLKTYWKQLILEINQKLD 60

Query: 92  EAVPIQYPDQIYEAMRYSVLANGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAAS 151
           EAVP+QYPDQIYEAMRYSVLA GAKRAPPVMCVAACELFGVDRLAAFPTACALEMVH AS
Sbjct: 61  EAVPLQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEAS 120

Query: 152 LIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLL 211
           LIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLL
Sbjct: 121 LIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLL 180

Query: 212 RVVAEIAKAVGSRGMAAGQFLDLEGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGAEDHEV 271
           RVVAEIA+AVGSRGMAAGQFLDLEGGPNS+EFVQEKKFGEM+QCSAVCGGLLAGAEDHE+
Sbjct: 181 RVVAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEMAQCSAVCGGLLAGAEDHEI 240

Query: 272 QRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESKKRKGKSYVGVYGIEKAKEVAEELRT 331
           QRLRRYGRAVGVLYQVVDDI +EQ+KKLD TDESK+ KGKSYV VYGIEKAKEVAEELR 
Sbjct: 241 QRLRRYGRAVGVLYQVVDDILEEQSKKLDYTDESKRSKGKSYVEVYGIEKAKEVAEELRA 300

Query: 332 KAKKELEGFEKYGDRVMPLYSFVDYAADRSFSLESST 369
           KAK ELEGFEKYGD+VMPLYSFVDYAADRSFS E+S+
Sbjct: 301 KAKNELEGFEKYGDQVMPLYSFVDYAADRSFSFETSS 335

[Close]
BLAST of Cp4.1LG04g04630 vs. NCBI nr
Match: gi|566167266|ref|XP_002306207.2| (hypothetical protein POPTR_0004s18610g [Populus trichocarpa])

HSP 1 Score: 506.5 bits (1303), Expect = 3.8e-140
Identity = 255/321 (79.44%), Postives = 281/321 (87.54%), Query Frame = 1 

Query: 47  GTKASIRCSSSSSSSSAVSSQAKSIQFDLKTYWKKLILEINQKLDEAVPIQYPDQIYEAM 106
           G  + I+CS S      VSSQ+K+ QFDLKTYW  LI EINQ+LD+AVPIQYPD+IYEAM
Sbjct: 32  GKMSKIQCSLS------VSSQSKTAQFDLKTYWTTLIGEINQELDQAVPIQYPDKIYEAM 91

Query: 107 RYSVLANGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSR 166
           RYSVLA GAKRAPPVMCVAACELFG +RLAAFPTACALEMVHAASLIHDDLPCMDDDPSR
Sbjct: 92  RYSVLAKGAKRAPPVMCVAACELFGGNRLAAFPTACALEMVHAASLIHDDLPCMDDDPSR 151

Query: 167 RGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIAKAVGSRGM 226
           RGQPSNHT+YGVDMAILAGDALFPLGF HIVS TP DLVPE RLLRV+AEIA+AVGSRGM
Sbjct: 152 RGQPSNHTIYGVDMAILAGDALFPLGFSHIVSQTPSDLVPEPRLLRVIAEIARAVGSRGM 211

Query: 227 AAGQFLDLEGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQ 286
           AAGQFLDLEGGPN++EFVQEKK+GEM +CSAVCGGLLAGA D E++RLRRYGRAVGVLYQ
Sbjct: 212 AAGQFLDLEGGPNAVEFVQEKKYGEMGECSAVCGGLLAGATDDEIRRLRRYGRAVGVLYQ 271

Query: 287 VVDDIRKEQAKKLDQTDESKKRKGKSYVGVYGIEKAKEVAEELRTKAKKELEGFEKYGDR 346
           VVDDI + +  K    +E K++KGKSYV VYG+EKA EVAEELR KAKKEL+GFEKYG+ 
Sbjct: 272 VVDDILEAKTMKSKLDEEEKRKKGKSYVAVYGVEKATEVAEELRAKAKKELDGFEKYGES 331

Query: 347 VMPLYSFVDYAADRSFSLESS 368
           V+PLYSFVDYAADR FS   S
Sbjct: 332 VVPLYSFVDYAADRGFSFGES 346

[Close]
BLAST of Cp4.1LG04g04630 vs. NCBI nr
Match: gi|743792842|ref|XP_011045566.1| (PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic [Populus euphratica])

HSP 1 Score: 506.1 bits (1302), Expect = 5.0e-140
Identity = 251/308 (81.49%), Postives = 274/308 (88.96%), Query Frame = 1 

Query: 61  SSAVSSQAKSIQFDLKTYWKKLILEINQKLDEAVPIQYPDQIYEAMRYSVLANGAKRAPP 120
           S +VS+ +K+ QFDLKTYW  LILEINQKLD+AVPIQYPD+IYEAMRYSVLA GAKRAPP
Sbjct: 38  SLSVSTHSKTPQFDLKTYWTDLILEINQKLDQAVPIQYPDKIYEAMRYSVLAKGAKRAPP 97

Query: 121 VMCVAACELFGVDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDM 180
           VMCVAACELFG DR AAFPTACALEMVH+ASLIHDDLPCMDDDPSRRGQPSNH +YGVDM
Sbjct: 98  VMCVAACELFGGDRHAAFPTACALEMVHSASLIHDDLPCMDDDPSRRGQPSNHKIYGVDM 157

Query: 181 AILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIAKAVGSRGMAAGQFLDLEGGPNS 240
           AILAGDALFPLGF HIVSHTP DLVPE RLL V+AEIA+AVGS GMAAGQFLDLEGGPNS
Sbjct: 158 AILAGDALFPLGFHHIVSHTPSDLVPEPRLLSVIAEIARAVGSTGMAAGQFLDLEGGPNS 217

Query: 241 IEFVQEKKFGEMSQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLD 300
           +EFVQEKKFGEM +CSAVCGGLLAGA+D E+QRLRRYGRAVGVLYQVVDDI + +  K  
Sbjct: 218 VEFVQEKKFGEMGECSAVCGGLLAGAKDDEIQRLRRYGRAVGVLYQVVDDILEAKTMKSK 277

Query: 301 QTDESKKRKGKSYVGVYGIEKAKEVAEELRTKAKKELEGFEKYGDRVMPLYSFVDYAADR 360
             ++ KK+KGKSYV  YG+EKA EVAEELR KAKKEL+GFEKYGD V+PLYSFVDYAADR
Sbjct: 278 VDEDKKKKKGKSYVAFYGVEKAIEVAEELRAKAKKELDGFEKYGDSVLPLYSFVDYAADR 337

Query: 361 SFSLESST 369
            FS   S+
Sbjct: 338 GFSFGESS 345

[Close]
BLAST of Cp4.1LG04g04630 vs. NCBI nr
Match: gi|566187928|ref|XP_002312936.2| (geranylgeranyl pyrophosphate synthase family protein [Populus trichocarpa])

HSP 1 Score: 503.4 bits (1295), Expect = 3.3e-139
Identity = 249/308 (80.84%), Postives = 276/308 (89.61%), Query Frame = 1 

Query: 61  SSAVSSQAKSIQFDLKTYWKKLILEINQKLDEAVPIQYPDQIYEAMRYSVLANGAKRAPP 120
           S +VS+ +K+ QFDLKTYW  LILEINQKLD+AVPIQYPD+IYEAMRYSVLA GAKRAPP
Sbjct: 38  SLSVSTHSKTPQFDLKTYWTTLILEINQKLDQAVPIQYPDKIYEAMRYSVLAKGAKRAPP 97

Query: 121 VMCVAACELFGVDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDM 180
           VMCVAACELFG +R AAFPTACALEMVH+ASLIHDDLPCMDDDPSRRGQPSNH +YGVDM
Sbjct: 98  VMCVAACELFGGNRHAAFPTACALEMVHSASLIHDDLPCMDDDPSRRGQPSNHKIYGVDM 157

Query: 181 AILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIAKAVGSRGMAAGQFLDLEGGPNS 240
           AILAGDALFPLGF+HIVSHTP DLVPE RLL V+AEIA+AVGS GMAAGQFLDLEGGPNS
Sbjct: 158 AILAGDALFPLGFRHIVSHTPSDLVPEPRLLSVIAEIARAVGSTGMAAGQFLDLEGGPNS 217

Query: 241 IEFVQEKKFGEMSQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLD 300
           +EFVQEKKFGEM +CSAVCGGLLAGA+D E+QRLRRYGRAVGVLYQVVDDI + +  K  
Sbjct: 218 VEFVQEKKFGEMGECSAVCGGLLAGAKDDEIQRLRRYGRAVGVLYQVVDDILEAKTMKSK 277

Query: 301 QTDESKKRKGKSYVGVYGIEKAKEVAEELRTKAKKELEGFEKYGDRVMPLYSFVDYAADR 360
             ++ KKRKGKSYV +YG+EKA EVAEELR KAK+EL+GFEKYG+ V+PLYSFVDYAADR
Sbjct: 278 VDEDKKKRKGKSYVALYGVEKAIEVAEELRAKAKEELDGFEKYGESVLPLYSFVDYAADR 337

Query: 361 SFSLESST 369
            FS   S+
Sbjct: 338 GFSFGESS 345

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g04630 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GGR_ARATH3.4e-11268.65Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic... [more]
GGPP1_ARATH1.7e-6643.53Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplast... [more]
GGPPS_SINAL1.7e-6644.11Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis al... [more]
GGPPS_CAPAN1.2e-6144.08Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Capsicum annuum GN=GGPS1... [more]
GGPPB_ARATH2.1e-6141.46Geranylgeranyl pyrophosphate synthase 11, chloroplastic OS=Arabidopsis thaliana ... [more]
BLAST of Cp4.1LG04g04630 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K0P7_CUCSA3.1e-16589.32Uncharacterized protein OS=Cucumis sativus GN=Csa_7G017680 PE=3 SV=1[more]
B9H1M5_POPTR2.7e-14079.44Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s18610g PE=3 SV=2[more]
B9HR16_POPTR2.3e-13980.84Geranylgeranyl pyrophosphate synthase family protein OS=Populus trichocarpa GN=P... [more]
B9SUY3_RICCO1.9e-13879.23Geranyl geranyl pyrophosphate synthase, putative OS=Ricinus communis GN=RCOM_137... [more]
W9RIP4_9ROSA5.6e-13874.85Heterodimeric geranylgeranyl pyrophosphate synthase small subunit OS=Morus notab... [more]
BLAST of Cp4.1LG04g04630 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G38460.11.9e-11368.65 geranylgeranyl reductase[more]
AT4G36810.19.3e-6843.53 geranylgeranyl pyrophosphate synthase 1[more]
AT3G29430.11.2e-6241.46 Terpenoid synthases superfamily protein[more]
AT2G18620.12.0e-6242.48 Terpenoid synthases superfamily protein[more]
AT3G32040.12.2e-6138.96 Terpenoid synthases superfamily protein[more]
BLAST of Cp4.1LG04g04630 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659094148|ref|XP_008447910.1|4.1e-16689.91PREDICTED: LOW QUALITY PROTEIN: heterodimeric geranylgeranyl pyrophosphate synth... [more]
gi|449454249|ref|XP_004144868.1|4.5e-16589.32PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, ch... [more]
gi|566167266|ref|XP_002306207.2|3.8e-14079.44hypothetical protein POPTR_0004s18610g [Populus trichocarpa][more]
gi|743792842|ref|XP_011045566.1|5.0e-14081.49PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, ch... [more]
gi|566187928|ref|XP_002312936.2|3.3e-13980.84geranylgeranyl pyrophosphate synthase family protein [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR017446Polyprenyl synthetase-related
IPR008949Isoprenoid_synthase_dom_sf
IPR000092Polyprenyl_synt
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008299 isoprenoid biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006694 steroid biosynthetic process
biological_process GO:0016114 terpenoid biosynthetic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0009507 chloroplast
cellular_component GO:0005622 intracellular
molecular_function GO:0032440 2-alkenal reductase [NAD(P)] activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0004161 dimethylallyltranstransferase activity
molecular_function GO:0004337 geranyltranstransferase activity
molecular_function GO:0004659 prenyltransferase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g04630.1Cp4.1LG04g04630.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000092Polyprenyl synthetasePFAMPF00348polyprenyl_syntcoord: 101..293
score: 6.8
IPR000092Polyprenyl synthetasePROSITEPS00723POLYPRENYL_SYNTHASE_1coord: 152..168
scor
IPR008949Isoprenoid synthase domainGENE3DG3DSA:1.10.600.10coord: 72..352
score: 1.2
IPR008949Isoprenoid synthase domainunknownSSF48576Terpenoid synthasescoord: 76..341
score: 3.7
IPR017446Polyprenyl synthetase-relatedPANTHERPTHR12001GERANYLGERANYL PYROPHOSPHATE SYNTHASEcoord: 17..365
score: 8.4E
NoneNo IPR availableunknownCoilCoilcoord: 319..339
scor
NoneNo IPR availablePANTHERPTHR12001:SF41HETERODIMERIC GERANYLGERANYL PYROPHOSPHATE SYNTHASE SMALL SUBUNIT, CHLOROPLASTICcoord: 17..365
score: 8.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG04g04630Cucsa.099150Cucumber (Gy14) v1cgycpeB0208
Cp4.1LG04g04630CmoCh11G017600Cucurbita moschata (Rifu)cmocpeB126
Cp4.1LG04g04630Cla015797Watermelon (97103) v1cpewmB674
Cp4.1LG04g04630Csa7G017680Cucumber (Chinese Long) v2cpecuB690
Cp4.1LG04g04630MELO3C013320Melon (DHL92) v3.5.1cpemeB610
Cp4.1LG04g04630ClCG02G003810Watermelon (Charleston Gray)cpewcgB597
Cp4.1LG04g04630CSPI07G01280Wild cucumber (PI 183967)cpecpiB692
Cp4.1LG04g04630Lsi11G012280Bottle gourd (USVL1VR-Ls)cpelsiB526
Cp4.1LG04g04630MELO3C013320.2Melon (DHL92) v3.6.1cpemedB722
Cp4.1LG04g04630CsaV3_7G001340Cucumber (Chinese Long) v3cpecucB0863
Cp4.1LG04g04630Bhi05G001441Wax gourdcpewgoB0851
Cp4.1LG04g04630CsGy7G001100Cucumber (Gy14) v2cgybcpeB964
Cp4.1LG04g04630Carg26370Silver-seed gourdcarcpeB1460
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG04g04630Cucurbita pepo (Zucchini)cpecpeB244
Cp4.1LG04g04630Cucurbita pepo (Zucchini)cpecpeB267
Cp4.1LG04g04630Cucurbita pepo (Zucchini)cpecpeB304
Cp4.1LG04g04630Cucurbita pepo (Zucchini)cpecpeB495
Cp4.1LG04g04630Cucumber (Gy14) v1cgycpeB0851
Cp4.1LG04g04630Cucurbita maxima (Rimu)cmacpeB154
Cp4.1LG04g04630Cucurbita maxima (Rimu)cmacpeB357
Cp4.1LG04g04630Cucurbita maxima (Rimu)cmacpeB497
Cp4.1LG04g04630Cucurbita maxima (Rimu)cmacpeB537
Cp4.1LG04g04630Cucurbita maxima (Rimu)cmacpeB575
Cp4.1LG04g04630Cucurbita moschata (Rifu)cmocpeB320
Cp4.1LG04g04630Cucurbita moschata (Rifu)cmocpeB456
Cp4.1LG04g04630Cucurbita moschata (Rifu)cmocpeB492
Cp4.1LG04g04630Cucurbita moschata (Rifu)cmocpeB525
Cp4.1LG04g04630Melon (DHL92) v3.5.1cpemeB639
Cp4.1LG04g04630Melon (DHL92) v3.6.1cpemedB766
Cp4.1LG04g04630Silver-seed gourdcarcpeB0487
Cp4.1LG04g04630Silver-seed gourdcarcpeB1479