Carg25018 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25018
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	General vesicular transport factor p115 like
Location	Cucurbita_argyrosperma_scaffold_176 : 125427 .. 132277 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAACGACTTCTTAATTGTAATTAGAAGCAATTGTTAATACTCTATTCCTTGTTCTCATCTATCTGAATGTAGGACAGCAATTTTGGTTTTGAAAGTAATTTCGAGTACTTGTGTTTTCCTTTATTTCTAGGGTTCTTTTGTATCAGTAAAATTATTGTTGAAGATGTATATATTTTGAAGAATTCAGTTTTTAATTGGGGATGTCTCGAACGGGAATCTGTTAGCTCAAATTGCTTGATGTTTTCTTGCTGGATCATATTTCTTGAAACTTATCCAATCCAACCAATCTAAATTTATAAGCCCCATTAAGTTTTCTCCAAACATTTATAATATCACTGATTTAGGGTGCTTTTTTTAAAAATGGAAATCTTAGTTTTGGAACGTGGTGAAGTCTAAAGCTCTTGGAATGGATCCCAAACACACGGGAGAGATTTTGAAGTAAGTTCTTTTCAACGAATTCAGTATTGAAATTCCTTTAGTATCTTTGGATAGGGATACTGGTCATTAACTTCTAAATTTGTTGTGCAGGCATTTGGACAAGCAGGATGAGCTTCTTATGGATGCTTATAGATTAATGTCCCATGAATTACATAAACTTCAGGTTTCTTTTCTTTTGCTCTTGATTTTCTGATCAGTTTGATGAACTTGCATTATCCATTTCATATTGTTTTTATCTGAGTTCTTCTGAGTGAAAGTGTTTGAGCTGTATTGTCCACCTTTCTAAGTTTTTACCTTCTAGAAGAATTTAGAAAAAAATCTGACATATTAGTACATATATGATTCTATACGCCTGTCTTTATGTATTAACCTGATTGGCATCCGTGGATATCTGATTCAGTTAGAGATTTTTTATTTTATTTTATTTGGCTTTCATTTTAAGTTCTTAAGCCTCTAGGGCTCTGGCTTATGTTCTGATTGCAGAATATAGTCCTTTGAAGTAACTAAGAGTACAGTGCTATTTTAGATTTTTTAGTACTATAGGATTTCATCGTTTTGGATATTTTTTTTTATGATAACTTACTATCAATAGAGAAAGACTGGGAGGGAGGTTGCCAAACAATATTTCAGTCTACTTTCAAAAGATATTAATGCAGTTAAAAATTCAAAATCAACTTAATGTTGTCTTGTTGTATTAGCCTGTTATATTTGCTCTTGAGATGAAACTTTGCTTTTTGAGAGAACTCCTGGAATTTTGGGTTACTACTGGAAGGTTGTTGGTTCTATTACTAGTGCTTGTAATTGCAATTCTAATATTTGCAGGTAGAAGAAGAAATGCTCATGCGCAAGTTTTATGAAATAATGTCAGCTCATGGTCTAACAAAGAAGGTTGTGATATCCAAATTGCACATAATTATACTTTGGATGTTCTTTTAATGTTCTCAAAGATGTCAAATTCTTAATAAATCTGACTTAATTCTGATCTACCTTGGGAACTTGATTGGATGGAATAAATAGCTTAAAGCTTGTAACAGCGGGTTCCTTCGAGAGTTAGGCTGTTAAGAAGTAGTGCAAGGTTCTCAGTTGCCATTAACTCTACCTTTGACTAGACTAGGTCTCTAATAACTTCCAGGTCAGGCTAACCAGTTAACTACTAAGGACCACAATGTACACCGAAACAGTATAAAATATTAAAGCACAATGATAGCATCCTATGCATTTCAGTCCCCTTAAATATGATTAAATTCATCTCCCGTTTAAACAAACCACAAAAAGGTTTATAGTGGGTAGAAGACATATAGATCATCTGCAATAAATGTCAAGTTGACCAGAGATATGTTAAGTTGTACTTTCATTAAGGGAACTACCAATTAATATGTTTTTTTGTGTGGAATATATATGGCTGTAAAGGAATATGGTGTTCAATGATTCTAGAGGTTTAGGGAAGGAGCTTGATGTCACAATCACACTCTTTGCGACTCACGAAGCGACTGTGCGACACTTACTCTTGTCCTCAAGTCAGCCAACCAACTGAAACTTAGGTTGCCGGTGGCACAATAGGCCTATGATTTAACCTCCACCACATTCTTGAAAAATGGTGTTAGAGAAAGTTTTGGAAAACGTTTTGAACGCAAATTTTATAAGCTAGTAAGCAATAAGCCACAACATCAATAACATTGATAGCATGTAACCTGGGTAGGAAGATTTGCCGACTAGTTGTATCCATTACATTTTGAGGTAAATTGCATTTGGCAAGTGGAGATATCAAAAGTGGCGAAGAGTAATACACTCACAAAATTACAAAAAAATAAATTACTACATTAGAATGAAAGACAATAAAAGCAAGGTAAAAGGATTTGGAATGGGCATGCAACCATGGGTAATATGCCTTAGACATGCATGACCGGGACATTCTCTCCCACTTAATTGGATGATGTCCTTGTTAACTGAATCTACTCAAACTCATCAATGTGAATAGCGACTGACTTTAGGTCTTCAATGCATTCTCTATTGCATAAAGGAGTCCCTTCACTATACAAGGAACTTTTGCACATCTCTTTTTGGCTTGCCTATTCGTCCTATTCTCTTAGCTAGGATCTCTTCTACTTTTTTTTGACATTATTCTTCATTGCGAGGGGAGGTCGTGTCACCTCGTTGTGGTCGTTGTTCTCTAAATCAGAATGGTAGAGTTTCAAGTTACTTACATGGATAACTGGTTCTGGATCGAAACTATTTTGGTCTTAACTTGATCAAAACTTTTGTCTCTGACTTGAAATTCCAGTGGCTTGTGTTTCAGATCCACCCATTTCTTCATCCGCCTAGATGTTTTCTCTAAGTAATCATGAGCTACTTTAGAGGTTCGTCTCTACGCTTTGGTGAAATTGTAGTCTTGGAGACTCTTTCCAGCATATGGATGGTCAATGACATGAGCCTTTTGACATTCAACAAGTTGTCTAGCTATTTTCAAAGTTTGCTAATTTGGGTGGAGCCCTACGGTACATATTTTTGGCATGCAGTCTTGTCTCCGATAGTAACTCAGTTTCATGATCCAACCCTCTATGTGGCGATAAAACTTTAGTGTTAGCCTTTCTAGAATTACATCTTGGTGTTTTTCTAGCAGCCCTTGGATCTTTATAAGAACTAGTCTACTAGTGGGTTCGTCGTGGGTGGGGCCTCATTTCAATTGTTGCATTGATATCATCTTCACCCCTTTTGAATGTTTGACACTAGTTTAAAAGATGGTGGGGTTGGATCCCATCACTAAGCATTTTGCTAGGGGTATGGGGATGTCTTTGTGTTTGAATAGGAACTCCTTCCTTAACATGATGCTGAAATCGTACATCTTGACAATCACAAAATCATCATGTCCATTCCAAGTCGCCATCTTGATTGTAATTCTCTTTGCAATTCCCAAATTGGGTAGGGTTACCAAATTGACGACCTTCGTCTTCCTTGTATCACTGTGCCAGAGTATGTTCAAGAACTTTGCTTCGGTCTCTATCACGAAGTTGTGAATGGTTTTAGAGTCGACCATAGTGCTCTTGGTTGATCTGTGGTTAACTCAGGTCTCAACATACATAAGACCCCGTCCACTAACTCTTTCATCTCCTTCCAATTTTCTCTGAAGAACAGATAAGAACTTCAGGGGCCCCATGTGGGGGTTGTCGATGATTCTGGTTGATGGTACTTCAAATTTTTCCGTTTTAGATTTGACTTTTGAAGTCGTTTTAAATGTTGCTTGGAAGACTTGGAGGGCCGCTCTATTTGAGCACTTAGATACTCGATGGGCCCCCTTATGTATGGAGCAGGACGAGGGCCCAATTGTAATTATTTTGGTTGTGCAGTCTCAGCTTAATTTCGACCTCTTTGTTGAAAGGGTTTATAGTCTCCTCCTCTAGTTCCAAGTCTATCACCAGCCCTTCGGCAAAATTTTATTTTTTTTCACACAAATCATAGTTATCTTCCATCAACTTAGAAAACTGCTTGACGTAGTCTCGGATATTTCCGATGTATTTCAATTCCCTAAATTTTCGTCTTGTTAATGTCTTGACATTCTCAGGGAAGAATTGTGAATCAAGTTTTTACTTTTATCTCTCCCAAGTGTATGTTGTCATCAACTGTCTTGAATATTCACCACAACTTCGCATCGTCAGCTAGATGCATTATTGCTAACGTAACATTTGCTTCCTCTGCCGTAGTATTTATGGTTTAAAAGTACTATTCAAGATCAAAGATAGCATGCTAGATTCTTGGCATCTTGAATCCCACCGAAGGACTTATGCTCTAGAACCTTTAGTTTGTTAAACTGGATTGTACCCCCCTACTAGGGTTTGAGAGTTTCTAAACCTTTGGCACGCTTGTCCATGTGGATAACAGAGCCTATCGACCTATCCCCACGCCCGAAGCAATCAACGGTGTGATTTTGTCTTTTAAGGTCTCAACCTTGAACATGGGCATCTCATCTAGGCGGCCAGCTACTGCGTTAATTTTGTCGGTTTTGGTGGAAATCTCATCTAGATGAGAATCCAAAAACCAATTATTGTTAGGGACTTCCTGTAGATAGAACATCTGCTCTTTGATCTCGACCAATTAGTTGACATGAGACTTGCCCAACTGCTTAGTTGTCGACATGTTTACTAATTTCACTATAGGAATTGACGTAGTTCTGTTCCAATTGTCACAATCGCACTCTTTTGGGACTCACAAAGCGATTGTGTAACACTTACTTTCACCTTTGAGTAAGTCAGCCAACTAAAACTAGGGTAGCTGGTGGCACAAATAGCCTGTGACTTAGAGAGCAAATGATTTTAGAAACGGGGTTAGAGAAGGTTTTGAAAAACGTTTTGAAGCAATTTTAGAGAGCAAATGTTATAAGCTAGCAAGCAATAAGGGACCATAATAACATTAATAGCATATAAATAGGGTAGGAAGATTCGGCAGCTAGTCATATCCTCCTATAGTACATTTTGAGGAAATTTCCTTTGGTAGACGTAGATATCAAAAGTGGCGGGGAGTCATACACTCACAAAATTACAAGAAAAATAATGACTACACCAGAATGAAAGACATACCATAAATCAATTGTCTGTTGCCTTTTAGCTAACGTCTATGGATTGAGGCAAAGTGTGATTAAATCAATTGTCTTGCATGAAAGTTTGACATGTTGAATCTAGAAACAAGATATACTCAGTCTTGTTCTACATTTGATTAAAAGAAGTATCAACTCCAATGGCATGAATCTCGTTTCAAAGGCTTAGATCCACAAAAGCATCTCATCATATTCTCTAGACTGTAATAAGCGTTTTCAGTCTGCATCTGTCTGTTGGTGGCTTGTACTACAATTCAATCCATATTTTTAACTTTCCATGTCCTCCAAAAATGGAATTGAAACTTCACATCATTATCGAAGGTGGCTATTTTGGATATCCCTCTGCAGTCTTGCCATCTTCATTTGTTTATTCATTTTTACTTTTTGGTTAAGAGAATTACGAAATAGAAACAAGACTAAGGGACAAAGCTCCACTTTGTTTCTAAAGGAAAGTGTTGCAGCTACACAAAGAATAAGTAGGAGATTTTACTGAAGCAGTGCGCGGCACAATGGAGGCAAACGTAGTTCTTGAACCTTCACCTTCTTTGGGTGCACTTTAGATGGCTTTGTTTATTTTGTCTCTTAGTGGGGCCTGCAGCATTTCTTTTCTTTCTAATGGCTTCCCTTTGTAGTCTTCTTCCTGTTACAGGCTTTCTTAACTTGGCTTATTGCTTAACAATTTCAGATTTTAGCTGCCTAGTGAACAATATCTAAAAGTTCTACTATTTCTCTTACCCCACAAACCCTACGGACCAACTCCTACTTTTCATCCCACGTCGGTTGGAGAGGAGAGCGAAGTATTCTTTGTAAGTGTGTGGAAACCTCTCCCTAGCAGACACGTTTTAAAAACCTTAAGGGGACCCCGAAAGGGAAAACTCAAAGAGGACAATATCTGCTAGAAACCCAAAGAAGACAATATCTGTCAGCGGTGGGCTTGGGCTGTTACATTTCACAAGAATCTTCCCTTCTCTAAAAGATAAGGAGGTGGATGGAGAAGGAACTCCTTGATTATCTTCCTGAACTTCTATGAATGTCAAACTAAAAGCCAAACACATCACAGAAGAGTTTCTAAAATCCCACAAAAACTGAGCCTAGTCAACAAACCTGCTCAAGTCATGTTAAAGTATTTCTAAAAGGAGATGGATGGAACAAATTCTTGCAGGTTGCCCCCGTTAGATTGCCACCCCCCATGTCGTTGAGAAAATGCATTAACTTCTATTTATATGTTCTCTACTTGAGTTGACTTATTTAGATTCCTACTAGATTTGCGCAATGCACATGTTCTAGCTGTTCCTCTTTTGGATCTAATTAAACTAGTATGTTGTCAAAATCAACCACTATAAACTCGCAAGAAATTATTTTGATACTTGTTCTATCAACTTCGTGTCGTGTATGTGCTGCTAGTATTGTTTAATGAGAAATGCGTAAGAGTCCTTAATTATTGTTTATAGAGTTTTATATTCCAATACTCTACTTCTACTTCTAGGATGTATGAAAATAGATCATAAGTTGGTCTAGTGGTAACTTCAAGAAAATGTTTGCATCAATTTATTATCGTTATCTTGTTCCACTCGATGAGTTTATTAAAAATTTATTTTGTGCATTGCAGAGTGAAGATGGTCTTGTTAGTTCTATTAGCAGAGGAGATGCGTTAGCTATATCTAATAGTGACGCTAAAAGGTAAAATTACCACGACCTCTCAACTCACTGTGAAAGGAAAGTCTCAATGTGACTCGCACTTATGTAATTTTTTTTCTTCATATGTAATTACAATTACATAAGCTTTTGATTTTTTTTTTTTTTTTTTTTTTTTTGAGTTCTTGA

mRNA sequence

ATAACGACTTCTTAATTGTAATTAGAAGCAATTGTTAATACTCTATTCCTTGTTCTCATCTATCTGAATGTAGGACAGCAATTTTGGTTTTGAAAGTAATTTCGAGTACTTGTGTTTTCCTTTATTTCTAGGGTTCTTTTGTATCAGTAAAATTATTGTTGAAGATGTATATATTTTGAAGAATTCAGTTTTTAATTGGGGATGTCTCGAACGGGAATCTGTTAGCTCAAATTGCTTGATGTTTTCTTGCTGGATCATATTTCTTGAAACTTATCCAATCCAACCAATCTAAATTTATAAGCCCCATTAAGTTTTCTCCAAACATTTATAATATCACTGATTTAGGGTGCTTTTTTTAAAAATGGAAATCTTAGTTTTGGAACGTGGTGAAGTCTAAAGCTCTTGGAATGGATCCCAAACACACGGGAGAGATTTTGAAGCATTTGGACAAGCAGGATGAGCTTCTTATGGATGCTTATAGATTAATGTCCCATGAATTACATAAACTTCAGGTAGAAGAAGAAATGCTCATGCGCAAGTTTTATGAAATAATGTCAGCTCATGGTCTAACAAAGAAGAGTGAAGATGGTCTTGTTAGTTCTATTAGCAGAGGAGATGCGTTAGCTATATCTAATAGTGACGCTAAAAGTTCTTGA

Coding sequence (CDS)

ATGGATCCCAAACACACGGGAGAGATTTTGAAGCATTTGGACAAGCAGGATGAGCTTCTTATGGATGCTTATAGATTAATGTCCCATGAATTACATAAACTTCAGGTAGAAGAAGAAATGCTCATGCGCAAGTTTTATGAAATAATGTCAGCTCATGGTCTAACAAAGAAGAGTGAAGATGGTCTTGTTAGTTCTATTAGCAGAGGAGATGCGTTAGCTATATCTAATAGTGACGCTAAAAGTTCTTGA

Protein sequence

MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGLVSSISRGDALAISNSDAKSS

Homology

[Close]

BLAST of Carg25018 vs. NCBI nr
Match: XP_022983888.1 (uncharacterized protein LOC111482368 [Cucurbita maxima])

HSP 1 Score: 120.6 bits (301), Expect = 2.6e-24
Identity = 65/80 (81.25%), Postives = 70/80 (87.50%), Query Frame = 0


Query: 1  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60
          MDPKHTGE+LKHL+KQDELLMDAYR MSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED
Sbjct: 1  MDPKHTGEVLKHLEKQDELLMDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60

Query: 61 GLVSSISRGDALAISNSDAK 81
          G  S     +ALA S +D+K
Sbjct: 61 GHDSCSGERNALA-SITDSK 79

[Close]

BLAST of Carg25018 vs. NCBI nr
Match: XP_022934797.1 (uncharacterized protein LOC111441864 [Cucurbita moschata])

HSP 1 Score: 120.2 bits (300), Expect = 3.4e-24
Identity = 65/80 (81.25%), Postives = 70/80 (87.50%), Query Frame = 0


Query: 1  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60
          MDPKHTGE+LKHL+KQDELLMDAYR MSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED
Sbjct: 1  MDPKHTGEVLKHLEKQDELLMDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60

Query: 61 GLVSSISRGDALAISNSDAK 81
          G  S     +ALA S +D+K
Sbjct: 61 GRDSCGGERNALA-SITDSK 79

[Close]

BLAST of Carg25018 vs. NCBI nr
Match: XP_023527243.1 (uncharacterized protein LOC111790538 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 119.8 bits (299), Expect = 4.4e-24
Identity = 58/61 (95.08%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 1  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60
          MDPKHTGE+LKHL+KQDELLMDAYR MSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED
Sbjct: 1  MDPKHTGEVLKHLEKQDELLMDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60

Query: 61 G 62
          G
Sbjct: 61 G 61

[Close]

BLAST of Carg25018 vs. NCBI nr
Match: KGN59534.1 (hypothetical protein Csa_3G824790 [Cucumis sativus])

HSP 1 Score: 110.9 bits (276), Expect = 2.0e-21
Identity = 56/65 (86.15%), Postives = 58/65 (89.23%), Query Frame = 0


Query: 1   MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60
           MDPKHTGEILKHL+KQ E LMDAYR MSHELHKLQVEEEMLMRKFYEIMSAHGL KK+ED
Sbjct: 87  MDPKHTGEILKHLEKQGEFLMDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNED 146

Query: 61  GLVSS 66
              SS
Sbjct: 147 DRNSS 151

[Close]

BLAST of Carg25018 vs. NCBI nr
Match: XP_008443366.1 (PREDICTED: uncharacterized protein LOC103486972 isoform X2 [Cucumis melo] >XP_016899685.1 PREDICTED: uncharacterized protein LOC103486972 isoform X2 [Cucumis melo] >XP_016899686.1 PREDICTED: uncharacterized protein LOC103486972 isoform X2 [Cucumis melo])

HSP 1 Score: 108.6 bits (270), Expect = 1.0e-20
Identity = 55/65 (84.62%), Postives = 58/65 (89.23%), Query Frame = 0


Query: 1  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60
          MDPKHT EILKHL+KQDE LMDAYR MSHELHKLQVEEEMLMRKFYEIMSAHGL KK+E+
Sbjct: 1  MDPKHTVEILKHLEKQDEFLMDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEE 60

Query: 61 GLVSS 66
             SS
Sbjct: 61 DRNSS 65

[Close]

BLAST of Carg25018 vs. TAIR10
Match: AT2G23040.1 (unknown protein)

HSP 1 Score: 41.6 bits (96), Expect = 2.8e-04
Identity = 20/31 (64.52%), Postives = 24/31 (77.42%), Query Frame = 0


Query: 27 MSHELHKLQVEEEMLMRKFYEIMSAHGLTKK 58
          M+ EL  L+VEEEM+MRKFYE+MS   L KK
Sbjct: 1  MTQELQTLEVEEEMMMRKFYELMSRQRLNKK 31

[Close]

BLAST of Carg25018 vs. TrEMBL
Match: tr|A0A0A0LF72|A0A0A0LF72_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G824790 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.3e-21
Identity = 56/65 (86.15%), Postives = 58/65 (89.23%), Query Frame = 0


Query: 1   MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60
           MDPKHTGEILKHL+KQ E LMDAYR MSHELHKLQVEEEMLMRKFYEIMSAHGL KK+ED
Sbjct: 87  MDPKHTGEILKHLEKQGEFLMDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNED 146

Query: 61  GLVSS 66
              SS
Sbjct: 147 DRNSS 151

[Close]

BLAST of Carg25018 vs. TrEMBL
Match: tr|A0A1S3B7U3|A0A1S3B7U3_CUCME (uncharacterized protein LOC103486972 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486972 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 6.7e-21
Identity = 55/65 (84.62%), Postives = 58/65 (89.23%), Query Frame = 0


Query: 1  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60
          MDPKHT EILKHL+KQDE LMDAYR MSHELHKLQVEEEMLMRKFYEIMSAHGL KK+E+
Sbjct: 1  MDPKHTVEILKHLEKQDEFLMDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEE 60

Query: 61 GLVSS 66
             SS
Sbjct: 61 DRNSS 65

[Close]

BLAST of Carg25018 vs. TrEMBL
Match: tr|A0A2C9US21|A0A2C9US21_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G112700 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.3e-19
Identity = 52/70 (74.29%), Postives = 62/70 (88.57%), Query Frame = 0


Query: 1  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60
          MDP+HTGEILKHL+KQ+ELLM+AY  MSHELHKLQVEEEMLMRKFYE+M+A GLTKK+E 
Sbjct: 1  MDPRHTGEILKHLEKQNELLMEAYNSMSHELHKLQVEEEMLMRKFYELMTAQGLTKKNEK 60

Query: 61 GLVSSISRGD 71
             +++S GD
Sbjct: 61 N--TNVSNGD 68

[Close]

BLAST of Carg25018 vs. TrEMBL
Match: tr|A0A251U400|A0A251U400_HELAN (Uncharacterized protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr08g0219071 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.8e-19
Identity = 48/61 (78.69%), Postives = 55/61 (90.16%), Query Frame = 0


Query: 1  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60
          MDPKHTG++L+HL+KQDELLMDAYR MSHELHKLQVEEEMLMR FY +M A GLTKK ++
Sbjct: 1  MDPKHTGDVLRHLEKQDELLMDAYRSMSHELHKLQVEEEMLMRAFYNLMDAQGLTKKKQN 60

Query: 61 G 62
          G
Sbjct: 61 G 61

[Close]

BLAST of Carg25018 vs. TrEMBL
Match: tr|A0A2P4N798|A0A2P4N798_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_17898 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.8e-19
Identity = 53/76 (69.74%), Postives = 63/76 (82.89%), Query Frame = 0


Query: 1  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60
          MDP++ GEILKHL+KQ+ELLMD+YR M+HE HKLQVEEEMLMRKF+EIM+AHGLTKKSED
Sbjct: 1  MDPRYMGEILKHLEKQNELLMDSYRSMTHESHKLQVEEEMLMRKFFEIMTAHGLTKKSED 60

Query: 61 --GLVSSISRGDALAI 75
             +      GD+ AI
Sbjct: 61 RSNVPDDAENGDSNAI 76

The following BLAST results are available for this feature:

BLAST of Carg25018 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022983888.1	2.6e-24	81.25	uncharacterized protein LOC111482368 [Cucurbita maxima]	[more]
XP_022934797.1	3.4e-24	81.25	uncharacterized protein LOC111441864 [Cucurbita moschata]	[more]
XP_023527243.1	4.4e-24	95.08	uncharacterized protein LOC111790538 [Cucurbita pepo subsp. pepo]	[more]
KGN59534.1	2.0e-21	86.15	hypothetical protein Csa_3G824790 [Cucumis sativus]	[more]
XP_008443366.1	1.0e-20	84.62	PREDICTED: uncharacterized protein LOC103486972 isoform X2 [Cucumis melo] >XP_01...	[more]

BLAST of Carg25018 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G23040.1	2.8e-04	64.52	unknown protein	[more]

BLAST of Carg25018 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg25018 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LF72\|A0A0A0LF72_CUCSA	1.3e-21	86.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G824790 PE=4 SV=1	[more]
tr\|A0A1S3B7U3\|A0A1S3B7U3_CUCME	6.7e-21	84.62	uncharacterized protein LOC103486972 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A2C9US21\|A0A2C9US21_MANES	1.3e-19	74.29	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G112700 PE=4 SV=...	[more]
tr\|A0A251U400\|A0A251U400_HELAN	2.8e-19	78.69	Uncharacterized protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr08g0219071 PE...	[more]
tr\|A0A2P4N798\|A0A2P4N798_QUESU	2.8e-19	69.74	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_17898 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25018-RA	Carg25018-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37718	FAMILY NOT NAMED	coord: 1..61

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25018	Csa3G824790	Cucumber (Chinese Long) v2	carcuB0274
Carg25018	CSPI03G38670	Wild cucumber (PI 183967)	carcpiB0278
Carg25018	CmaCh11G011500	Cucurbita maxima (Rimu)	carcmaB0342
Carg25018	CmoCh11G011920	Cucurbita moschata (Rifu)	carcmoB0346
Carg25018	Lsi03G015170	Bottle gourd (USVL1VR-Ls)	carlsiB220
Carg25018	Cp4.1LG04g00440	Cucurbita pepo (Zucchini)	carcpeB0347
Carg25018	CsGy3G036200	Cucumber (Gy14) v2	carcgybB0261
Carg25018	MELO3C030975.2	Melon (DHL92) v3.6.1	carmedB0259
Carg25018	CsaV3_3G041080	Cucumber (Chinese Long) v3	carcucB0277
Carg25018	Cla97C10G198270	Watermelon (97103) v2	carwmbB0251
Carg25018	Bhi11G002448	Wax gourd	carwgoB0313

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None