CmoCh11G011920 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh11G011920
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionBranched-chain-amino-acid aminotransferase
LocationCmo_Chr11 : 6965092 .. 6972378 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAATTGAAGACGGAAACTGAGGGCCCATCCTCTTCTCTCACCCCACCTGTGATCTCACCTCTCCCTTTCTTTGCTCCTCTGTCGTTGCTCTCATTCTTGCCGTCACCGTCTCCGTCGCCGTCGCCGTCGCCTGCTGAGATATTTGAGAAGCAAACCTGTTGACAGGCGACAGTACTGAGTTTATTTTTGTTCTTAACGCTTTGTGCTTCCGCCTTCTCATTCTCTTTCACTTAACCATTAACCAATTGATAGAGGAGATAATTGAGTGTAGCCTATCTCGCCCTTTCATGTTCAAGATCCTTATTTATTCCAATTTCCGTCAGTTAATGATTGATTATGTGAATGAAATAACGACTTCTTAATTGTAATTAGAAGCAATTGTTAATACTCTATTCCTTGTTCTCATCTATCTGAATGTAGGACAGCAATTTTGGTTTTGAAAGTAATTTCGAGTACTTGTTTTTTCCTTTATTTCTAGGGTTCTTTTGTATCAGTAAAATTATTGTTGAAGATGTATATATTTTGAAGAATTCAGTTTTTAATTGGGGATGTCTCGAACGGGAATCTGTTAGCTCAAATTGCTTGATGTTTTCTTGCTGGATCATATTTCTTGAAACTTATCCAATCCAACCAATCTAAATTTATAAGCCCCATTAAGTTTTCTCCAAACATTTATAATATCACTGATTTAGGGTGCTTTTTTTAAAAATGGAAATCTTAGTTTTGGAACGTGGTGAAGTCTAAAGCTCTTGGAATGGATCCCAAACACACGGGAGAGATTTTGAAGTAAGTTCTTTTCAACGAATTCAGTATTGAAATTCCTTTAGTATCTTTGGATAGGGATACTGGTCATTAACTTCTAAATTTGTTGTGCAGGCATTTGGACAAGCAGGATGAGCTTCTTATGGATGCTTATAGATTAATGTCCCATGAATTACATAAACTTCAGGTTTCTTTTCTTTTGCTCTTGATTTTCTGATCTGTTTGATGAACTTGCATTATCCATTTCATATTGTTTTTATCTGAGTTCTTCTGAGTGAAAGTGTTTGAGCTGTATTGTCCACCTTTCTAAGTTTTTACCTTCTAGAAGAATTTAGAAAAAAATCTGACATATTACTACATATATGATTCTATACGCCTGTCTTTATGTATTAACCTGATTGGCAACCGTGGATATCTGATTCAGTTAGAGATTTTTTATTTTATTTTATTTGGCTTTCATTTTAAGTTCTTAAGCCTCTAGGGCTCTGGCTTATGTTCTGATTGCAGAATATAGTCCTTTGAAGTAACTAAGAGTACAGTGCTATTTTAGATTTTTTAGTACTATAGGATTTCATCGTTTTGGATATTTTTTTTTATGATAACTTACTATCAATAGAGAAAGACTGGGAGGGAGGTTGCCAAACAATATTTCAGTCTACTTTCAAAAGATATTAATGCAGTTAAAAATTCAAAATCAACTTAATGTTGTCTTGTTGTATTAGCCTGTTATATTTGCTCTTGAGATGAAACTTTGCTTTTTGAGAGAACTCCTGGAATTTTGGGTTACTACTGGAAGGTTGTTGGTTCTATTACTAGTGCTTGTAATTGCAATTCTAATATTTGCAGGTAGAAGAAGAAATGCTCATGCGCAAGTTTTATGAAATAATGTCAGCTCATGGTCTAACAAAGAAGGTTGTGATATCCAAATTGCACATAATTATACTTTGGATGTTCTTTTAATGTTCTCAAAGATGTCAAATTCTTAATAAATCTGACTTAATTCTGATCTACCTTGGGAACTTGATTGGATGGAATGAATAGCTTAAAGCTTGTAACAGCGGGTTCCTTCGAGAGTTAGGCTGTTAAGAAGTAGTGCAAGGTTCTCAGTTGCCATTAACTCTACCTTTGACTAGACTAGGTCTCTAATAACTTCCAGGTCAGGCTAACCAGTTAACTACTAAGGACCACAATGTACACCAAAACAGTATAAAATATTAAAGCACAATGATAGCATCCTATGCATTTCAGTCCCCTTAAATATGATTAAATTCATCTCCCGTTTAAACAAACCACAAAAAGGTTTATAGTGGGTAGAAGACATATAGATCATCTGCAATAAATGTCAAGTTGACCAGAGATATGTTAAGTTGTACTTTCATTAAGGGAACTACCAATTAATATGTTTTTTTTGTGTGGAATATATATGGCTGTAAAGGAATATGGTGTTCAATGATTCTAGAGATTTAGGGAAGGAGCTTGGTGTCACAATCGCACTCTTTGCGACTCACGAAGCGACTGTGCGACACTTACTCTTGTCCTCAAGTCAGCCAACCAACTGAAACTTAGGTTGCCGGTGGCACAATAGGCCTGATTTAACCTCCACCACATTCTTGAAAAATGGTGTTAGAGAAAGTTTTGGAAAACATTTTGAACGCAAATTTTATAAGCTAGCAAGCAATAAGCCACAACATCAATAACATTGATAGCATGTAACCTGGGTAGGGAGATTTGACGACTAGTTGTATCCATTACATTTTGAGGTAAATTGCATTTGGCAAGTGGAGATATCAAAAGTGGCGAAGAGTAATACACTCACAAAATTACAAGAAAAATAAATTACTACATTAGAATGAAAGACATATAATAAAAGCAAGGTAAAAGGATTTGGAATGGGCATGCAACCATGGGTAATATGCCTTAGGCATGCATGACTGGGACATTCTCTCCCACTTAATTGGATGATGTCCTTGTTAACTGAATCTACTCAAACTCATCAATGTGAATAGCGACTGACTTTAGGTCTTCAATGCATTCTCTATTGCATAAAGGAGTCCCTTCACTATACAAGGAACTTTTGCACATCTCTTTTTGGCTTGCCTATTCGTCCTATTCTCTTAGCTAGGATCTCTTCTACTTTTTTTTGACATTATTCTTCATTGCGAGGGGAGGTCGTGTCACCTCGTTGTGGTCGTTGTTCTCTAAATTAGAATGGTAGAGTTTCAAGTTACTTACATGGATAACTGGGTGAATCTTTATCCATGAAGGAAATTGAGTCCTGTATGATGCCTTCCTGACCTTCTAAATGACTTCGGCTAGTTCTTCATATTTTCACACTAGTCACTGATCCTTGTTGCTTCTAGATCGAAACTATTTTGGTCTTAACTTGATCAGAACTTTTGTCTCTGACTTGGAATTCCAGTGGCTTGTGTTTCAGATCCACCCATTTCTTCATCCGCCTAGATGTTTTCTCTAAGTAATCATGAGCTACTTTAGAGGTTCGTCTCTACGCTTTGGTGAAATTGTAGTCTTGGAGACTCTTTCCAGCATATGGATGGTCAATGACATGAGCCTTTGTGGGCCTAATAAACTTGACATTCAACAAGTTGTCTAGCTATTTTCAAAGTTTGCTAATTTGGGTGGAGCCCTACGGTACATATTTTTGGCATGCAGTCTCGTCTCCGATAGTAACTCAGTTTCATGATCCAACCCTCTATGTGGCGATAAAACTTTAGTGTTAGCCTTTCTAGAATTACACCTTGGTGTTTTTCTAGCAGCCCTTGGATCTTTATAAGAACTAGTCTACTAGTGGGTTCGTCGTGGGTGGGGCCTCATTTCAATTGTTAGCGTTGATATCATCTTCACCCCTTTTGAATGTTTGACACTAGTTTAAAAGATGGTGGGGTTGGATCCCATCACTAAGCATTTTGCTAGGGGTATGGGGATGTCTTTGTGTTTGAATAGGAACTCCTTCCTTAACATGATGCTGAAATCGTACATCTTGACAATCACAAAATCATCATGTCCATTCCAAGTCGCCATCTTGATTGTAATTCTCTTTGCAATTCCCAAATTGGGTAGGGTTACCAAATTGACGACCTTCGTCTTCCTTGTATCACTGTGCCAGAGTATGTTCAAGAACTTTGCTTCGGTCTCTGTCACGAAGTTGTGAATGGTTTTAGAGTCGACCATAGTGCTCTTGGTTGATCTGTGGTTAACTCAGGTCTCAACATACATAAGACCCCGTCCACTAACTCTTTCATCTCCCTCCAATTTTCTCTGAAGAACAGATAAGAACTTCAGGGGCCCCATGTGGGGGTTGTCGATGATTCCGGTTGATGGTACTTCAAATTTTGCCGTTTTAGATTTGACTTTTGAAGTCGTTTTAAATGTTGCTTGGAAGACTTGGAGGGCCGCTCTATTTGAGCACTTAGATACTCGATGGGCCCCCTTATGTATGGAGAAGGACGAGGGCCCAATTGTAATTATTTTGGTTGTGCAGTCTCAGCTTAATTTCGACCTCTTTGTTGAAAGGGTTTATAGTCTCCTCCTCTAGTTCCAAGTCTATCACCAGCCCTTCGGCAAAATTTTGTTTTTTTTTCACACAAATCATAGTTATCTTCCATCAACTTAGAAAACTGCTTGACGTAGTCTCGGATATTTCTGATGTATTTCAATTCCCTAAATTTTCGTCTTGTTAATGTCTTGACATTCTCAGGGAAGAATTGTGAATCAAGTTTTTACTTTTATCTCTCCCAAGTGTATGTTGTCATCAACTGTCTTGAATATTCACATACTTGGATCTCCACCACAACTTCGCATCGTCAGCTAGATGCATTATTGCTAACGTAACATTTGCTTCCTCTGCCGTAGTATTTATGGTTTAAAACTACTATTCAAGATCAAAGATAGAATGCTAGATTCTTGGCATCTTGAATCCCACTGAAGGACTTAGGCTCTAGAACCTTTAGTTTGTTAAACTGGATTGTACCCCCCTACTAGGGTTTGAGAGTTTCTAAACCTTTGACACGCTTGTCCATGTGGATAACAGAGCCTATCGACCTATCCCCACGCCCGAAGCAATCAACTGTATGATTTTGTCTTTTAAGGTCTCAACCTTGAACATGGGCATCTCATCTAGGCGGCCAGCTACTGCGTTAATTTTGTCGGTTTTGGTGGAAATCTCATCTAGATGAGAATCCAAAAACCAATTATTGTTAGGGACTTCCTGTAGATAGAACATCTGCTCTTTGATCTCGACCAATTAGTTGACATGAGACTTGCCCAACTGCTTAGTTGTCGACATGTTTACTAATTTCACTATAGGAATTGACGTAGTTCTGTTCCAATTGTCACAATCGCACTCTTTTGGGACTCACAAAGCGGTTGTGTAACACTTACTTTCACCTTTGAGTAAGTCAGCCAACTAAAACTAGGGTAGCTGGTGGCACAAATAGCCTATGACTTAGAGAGCAAATGATTTTAGAAACGGGGTTAGAGAAGGTTCTGAAAAACGTTTTGAAGCAATTTTAGAGAGCAAATGTTATAAGCTAGCAAGCAATAAGGGACCATTAATAGCATATAAATAGGGTAGGAAGATTCGGCAGCTAGTCATATCCTCCTACATTTTGAGGAAATTTCCTTTGGTAGACGTAGATATCAAAAGTGGCGGGGAGTCATACACTCACAAAATTACAAGAAAAATAATGACTACACCAGAATGAAAGACATACCATAAATCAATTGTCTGTTGCCTTTTAGCTAACGTCTATGGATTGAGGCAAAGTGTGATTAAATCAATTGTCTTGCATGAAAGTTTGACATGTTGAATCTAGAAACAAGATATACTCAAGTCTTGTTCTACATTTGATTAAAAGAAGTATCAACTCCAATGGCATGAATCTCGTTTCAAAGGCTTAGATCCACAAAAGCATCTTATCATATTCTCTAGACTGTAATAAGCGTTTTCAGTCTGCATCTGTCTGTTGGTGGCTTGTACTACAATTGAATCCATATTTTTAACTTTCCATGTCCTCCAAAAATGGAATTGAAACTTCACATCATTATCGAAGGTGGCTATTTTGAATATCCCTCTGCAGTCTTGCCATCTTCATTTGTTTATTCATTTTTACTTTTTGGTTAAGAGAATTACGAAATAGAAACAAGACTAAGGGACAAAGCTCCACTTTGTTTCTAAAGGAAAGTGTTGCAGCTACACAAAGAATAAGTAGGAGATTTTACTGAAGCAGTGCGCGGCACAATGGAGGCAAACGTAGTTCTTGAACCTTCACCTTCTTTGGGTGCACTTTAGTTGGCTTTGTTTATTTTGTCTCTTAGTGGGGCCTGCAGCATTTCTTTTCTTTCTAATGGCTTCCCTTTGTAGTCTTCTTCCTGTTACAGGCTTTCTTAACTTGGCTTATTGCTTAACAATTTCAGATTTTAGCTGCCCAGTGAACAATATCTAAAAGTTCTACTATTTCTCTTACCCCACAAACCGTACGGACAAACTCCTACTTTTCATCCCACGTTGGTTGGAGAGGAGAGCGAAGTATTCTTTGTAAGGGTGTGGAAACCTCTCCCTAGCAAACACGTTTTAAAAACAAAGAGGACAATATCTGCTAGAAACCCAAAGAGGACAATATCTGTCAGCGGTGGGCTTGGGCTGTTATATTTCACAAGAATCTTCCAGATAAGGAGGTGGATGGAGAAGGAACTCCTTGATTATCTTCCTGAACTTCTATGAATGTCAAACTAAAAGCCAAACACATCACAGAAGAGTTTCTAAAATCCCACAAAAACTGAGCCTAGTCAACAAACCTGCTCAAGTCATGTTAAAGTATTTCTAAAAGGAGATGGATGGAACAAATTCTTGCAGGTTGCCCCCGTTAGATTGCCACCCCCCATGTCGTTGAGAAAATGCATTAACTTCTATTTATATGTTCTCTACTTGAGTTGACTTATTTAGATTCCTACTAGGATTGCGCAATGCACATGTCTAGCTGTTCCTCCTTTGGATCTAATTAAACTAGTATGTTGTCAAAATCAACCACTATAATCTCACAACAAATTATTTTGATACTTGTTCTATCAACTTCGTGTCGTGTATGTGCTGCTAGTATTGTTTAATGAGAAATGCGTAAGAGTCCTTAATTATTGTTTATAGAGTTTTATATTCCAATACTCTACTTCTACTTCTAGGATGTATGAAAATAGATCATAAGTTGGTCTAGTGGTAACTTCAAGAAAATGTTTGCATCAATTTATTATCGTTATCTTGTTCCACTCGATGAGTTTATTAAAAATTTATTTTGTGCATTGCAGAGTGAAGATGGTCGTGTTAGTTCTATTAGCAGAGGAGATGCGTTAACTATATCTAATAGTGACGCTAAAAGGTAAAATTACCACGACCTCTCAACTCACTGTGAAAGGAAAGTCTCAATGTGACTCGCACGTATGTAATTTTTCTCTTCATAGTATAAACTAAAATTTTGATCATATGTAATTACAATTACATAAGCTTTTGATTT

mRNA sequence

GAAATTGAAGACGGAAACTGAGGGCCCATCCTCTTCTCTCACCCCACCTGTGATCTCACCTCTCCCTTTCTTTGCTCCTCTGTCGTTGCTCTCATTCTTGCCGTCACCGTCTCCGTCGCCGTCGCCGTCGCCTGCTGAGATATTTGAGAAGCAAACCTGTTGACAGGCGACATTTTGGAACGTGGTGAAGTCTAAAGCTCTTGGAATGGATCCCAAACACACGGGAGAGATTTTGAAGCATTTGGACAAGCAGGATGAGCTTCTTATGGATGCTTATAGATTAATGTCCCATGAATTACATAAACTTCAGGTAGAAGAAGAAATGCTCATGCGCAAGTTTTATGAAATAATGTCAGCTCATGGTCTAACAAAGAAGAGTGAAGATGGTCGTGTTAGTTCTATTAGCAGAGGAGATGCGTTAACTATATCTAATAGTGACGCTAAAAGGTAAAATTACCACGACCTCTCAACTCACTGTGAAAGGAAAGTCTCAATGTGACTCGCACGTATGTAATTTTTCTCTTCATAGTATAAACTAAAATTTTGATCATATGTAATTACAATTACATAAGCTTTTGATTT

Coding sequence (CDS)

ATGGATCCCAAACACACGGGAGAGATTTTGAAGCATTTGGACAAGCAGGATGAGCTTCTTATGGATGCTTATAGATTAATGTCCCATGAATTACATAAACTTCAGGTAGAAGAAGAAATGCTCATGCGCAAGTTTTATGAAATAATGTCAGCTCATGGTCTAACAAAGAAGAGTGAAGATGGTCGTGTTAGTTCTATTAGCAGAGGAGATGCGTTAACTATATCTAATAGTGACGCTAAAAGGTAA
Homology
[Close]
BLAST of CmoCh11G011920 vs. TrEMBL
Match: A0A0A0LF72_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G824790 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.1e-22
Identity = 57/65 (87.69%), Postives = 59/65 (90.77%), Query Frame = 1 

Query: 1   MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60
           MDPKHTGEILKHL+KQ E LMDAYR MSHELHKLQVEEEMLMRKFYEIMSAHGL KK+ED
Sbjct: 87  MDPKHTGEILKHLEKQGEFLMDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNED 146

Query: 61  GRVSS 66
            R SS
Sbjct: 147 DRNSS 151

[Close]
BLAST of CmoCh11G011920 vs. TrEMBL
Match: A0A103Y9I3_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_016677 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.4e-19
Identity = 49/65 (75.38%), Postives = 57/65 (87.69%), Query Frame = 1 

Query: 1  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60
          MDPK+TGE+L+HL+KQDELLMDAYR MSHELHKLQVEEEMLMR FY++M+A GL  K +D
Sbjct: 1  MDPKYTGEMLRHLEKQDELLMDAYRSMSHELHKLQVEEEMLMRAFYDLMAAQGLATKKDD 60

Query: 61 GRVSS 66
          GR  S
Sbjct: 61 GRNGS 65

[Close]
BLAST of CmoCh11G011920 vs. TrEMBL
Match: A0A059DEI8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01208 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 4.8e-18
Identity = 56/85 (65.88%), Postives = 66/85 (77.65%), Query Frame = 1 

Query: 1  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60
          MD K++GE LKHL+KQ+ELLMDAYR MSHELHKLQVEEEMLMRKFYE+MSA GLTKK   
Sbjct: 1  MDAKYSGETLKHLEKQNELLMDAYRSMSHELHKLQVEEEMLMRKFYELMSAQGLTKKDGV 60

Query: 61 GRVSSISR--GD--ALTISNSDAKR 82
          G+ +S     GD  AL I + D ++
Sbjct: 61 GKDASGDNRTGDSMALVIKDGDEQQ 85

[Close]
BLAST of CmoCh11G011920 vs. TrEMBL
Match: W9RUQ9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009407 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.4e-17
Identity = 51/85 (60.00%), Postives = 63/85 (74.12%), Query Frame = 1 

Query: 1  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60
          MD +  G+I+KHL+KQ+ELLM+AYR MSHELHKLQVEEEMLMRKFYEIMSAHG  KK+ED
Sbjct: 1  MDSRQNGDIIKHLEKQNELLMEAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGKIKKTED 60

Query: 61 GRV----SSISRGDALTISNSDAKR 82
            +      +    AL  S S+ ++
Sbjct: 61 RSIVLDDRIVEESTALVTSTSNEEQ 85

[Close]
BLAST of CmoCh11G011920 vs. TrEMBL
Match: A0A067KIG8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12526 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.4e-17
Identity = 50/75 (66.67%), Postives = 61/75 (81.33%), Query Frame = 1 

Query: 1  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60
          MDP++TGE+LKHL+KQ+ELL +AY  MSHELHKLQVEEEMLMRKFYE+M+A GL+KK+E 
Sbjct: 1  MDPRYTGEMLKHLEKQNELLTEAYNSMSHELHKLQVEEEMLMRKFYELMAAQGLSKKNEG 60

Query: 61 GRVSSISR--GDALT 74
              SI    GD+ T
Sbjct: 61 NTNFSIGGQIGDSTT 75

[Close]
BLAST of CmoCh11G011920 vs. TAIR10
Match: AT4G37608.1 (AT4G37608.1 unknown protein)

HSP 1 Score: 68.9 bits (167), Expect = 1.6e-12
Identity = 32/57 (56.14%), Postives = 43/57 (75.44%), Query Frame = 1 

Query: 1  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKK 58
          M+P+HT ++LKHL+KQ ELL +A + M  EL KL+VE E +MRK YE+M+ H L KK
Sbjct: 1  MEPQHTDDVLKHLEKQTELLKEAQKNMLQELQKLEVEHETMMRKLYELMNTHSLNKK 57

[Close]
BLAST of CmoCh11G011920 vs. NCBI nr
Match: gi|700204401|gb|KGN59534.1| (hypothetical protein Csa_3G824790 [Cucumis sativus])

HSP 1 Score: 113.6 bits (283), Expect = 1.6e-22
Identity = 57/65 (87.69%), Postives = 59/65 (90.77%), Query Frame = 1 

Query: 1   MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60
           MDPKHTGEILKHL+KQ E LMDAYR MSHELHKLQVEEEMLMRKFYEIMSAHGL KK+ED
Sbjct: 87  MDPKHTGEILKHLEKQGEFLMDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNED 146

Query: 61  GRVSS 66
            R SS
Sbjct: 147 DRNSS 151

[Close]
BLAST of CmoCh11G011920 vs. NCBI nr
Match: gi|659085339|ref|XP_008443366.1| (PREDICTED: uncharacterized protein LOC103486972 [Cucumis melo])

HSP 1 Score: 111.3 bits (277), Expect = 7.9e-22
Identity = 56/65 (86.15%), Postives = 59/65 (90.77%), Query Frame = 1 

Query: 1  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60
          MDPKHT EILKHL+KQDE LMDAYR MSHELHKLQVEEEMLMRKFYEIMSAHGL KK+E+
Sbjct: 1  MDPKHTVEILKHLEKQDEFLMDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLVKKNEE 60

Query: 61 GRVSS 66
           R SS
Sbjct: 61 DRNSS 65

[Close]
BLAST of CmoCh11G011920 vs. NCBI nr
Match: gi|976920256|gb|KVI04989.1| (hypothetical protein Ccrd_016677 [Cynara cardunculus var. scolymus])

HSP 1 Score: 102.1 bits (253), Expect = 4.8e-19
Identity = 49/65 (75.38%), Postives = 57/65 (87.69%), Query Frame = 1 

Query: 1  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60
          MDPK+TGE+L+HL+KQDELLMDAYR MSHELHKLQVEEEMLMR FY++M+A GL  K +D
Sbjct: 1  MDPKYTGEMLRHLEKQDELLMDAYRSMSHELHKLQVEEEMLMRAFYDLMAAQGLATKKDD 60

Query: 61 GRVSS 66
          GR  S
Sbjct: 61 GRNGS 65

[Close]
BLAST of CmoCh11G011920 vs. NCBI nr
Match: gi|1009145435|ref|XP_015890335.1| (PREDICTED: uncharacterized protein LOC107424946 [Ziziphus jujuba])

HSP 1 Score: 100.9 bits (250), Expect = 1.1e-18
Identity = 52/76 (68.42%), Postives = 62/76 (81.58%), Query Frame = 1 

Query: 1  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60
          MDP H G++LKHL+KQ+ LLM+AYR MSHELHKLQVEEEMLMRKFYEIMSAHG  KK+ED
Sbjct: 1  MDPSHAGDMLKHLEKQNGLLMEAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGKIKKTED 60

Query: 61 -GRVSSISR-GDALTI 75
           G +S   + GD+  +
Sbjct: 61 RGNISDYGKVGDSTAL 76

[Close]
BLAST of CmoCh11G011920 vs. NCBI nr
Match: gi|702241785|ref|XP_010047125.1| (PREDICTED: uncharacterized protein LOC104436094 isoform X2 [Eucalyptus grandis])

HSP 1 Score: 98.2 bits (243), Expect = 6.9e-18
Identity = 56/85 (65.88%), Postives = 66/85 (77.65%), Query Frame = 1 

Query: 1  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSED 60
          MD K++GE LKHL+KQ+ELLMDAYR MSHELHKLQVEEEMLMRKFYE+MSA GLTKK   
Sbjct: 1  MDAKYSGETLKHLEKQNELLMDAYRSMSHELHKLQVEEEMLMRKFYELMSAQGLTKKDGV 60

Query: 61 GRVSSISR--GD--ALTISNSDAKR 82
          G+ +S     GD  AL I + D ++
Sbjct: 61 GKDASGDNRTGDSMALVIKDGDEQQ 85

The following BLAST results are available for this feature:
BLAST of CmoCh11G011920 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh11G011920 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LF72_CUCSA1.1e-2287.69Uncharacterized protein OS=Cucumis sativus GN=Csa_3G824790 PE=4 SV=1[more]
A0A103Y9I3_CYNCS3.4e-1975.38Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_016677 PE=4 ... [more]
A0A059DEI8_EUCGR4.8e-1865.88Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01208 PE=4 SV=1[more]
W9RUQ9_9ROSA2.4e-1760.00Uncharacterized protein OS=Morus notabilis GN=L484_009407 PE=4 SV=1[more]
A0A067KIG8_JATCU2.4e-1766.67Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12526 PE=4 SV=1[more]
BLAST of CmoCh11G011920 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G37608.11.6e-1256.14 unknown protein[more]
BLAST of CmoCh11G011920 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700204401|gb|KGN59534.1|1.6e-2287.69hypothetical protein Csa_3G824790 [Cucumis sativus][more]
gi|659085339|ref|XP_008443366.1|7.9e-2286.15PREDICTED: uncharacterized protein LOC103486972 [Cucumis melo][more]
gi|976920256|gb|KVI04989.1|4.8e-1975.38hypothetical protein Ccrd_016677 [Cynara cardunculus var. scolymus][more]
gi|1009145435|ref|XP_015890335.1|1.1e-1868.42PREDICTED: uncharacterized protein LOC107424946 [Ziziphus jujuba][more]
gi|702241785|ref|XP_010047125.1|6.9e-1865.88PREDICTED: uncharacterized protein LOC104436094 isoform X2 [Eucalyptus grandis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G011920.1CmoCh11G011920.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37718FAMILY NOT NAMEDcoord: 2..57
score: 3.9
NoneNo IPR availablePANTHERPTHR37718:SF1SUBFAMILY NOT NAMEDcoord: 2..57
score: 3.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh11G011920CmaCh11G011500Cucurbita maxima (Rimu)cmacmoB112
CmoCh11G011920Csa3G824790Cucumber (Chinese Long) v2cmocuB118
CmoCh11G011920ClCG10G015420Watermelon (Charleston Gray)cmowcgB079
CmoCh11G011920CSPI03G38670Wild cucumber (PI 183967)cmocpiB119
CmoCh11G011920Lsi03G015170Bottle gourd (USVL1VR-Ls)cmolsiB106
CmoCh11G011920Cp4.1LG04g00440Cucurbita pepo (Zucchini)cmocpeB127
CmoCh11G011920MELO3C030975.2Melon (DHL92) v3.6.1cmomedB127
CmoCh11G011920CsaV3_3G041080Cucumber (Chinese Long) v3cmocucB0134
CmoCh11G011920Cla97C10G198270Watermelon (97103) v2cmowmbB083
CmoCh11G011920Bhi11G002448Wax gourdcmowgoB0090
CmoCh11G011920CsGy3G036200Cucumber (Gy14) v2cgybcmoB272
CmoCh11G011920Carg25018Silver-seed gourdcarcmoB0346
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh11G011920Cucumber (Gy14) v1cgycmoB0924
CmoCh11G011920Melon (DHL92) v3.5.1cmomeB117
CmoCh11G011920Watermelon (97103) v1cmowmB079