CmaCh11G011500 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh11G011500
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Branched-chain-amino-acid aminotransferase
Location	Cma_Chr11 : 6614904 .. 6627829 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCCTCTTCTCTCACCCCACCTGTGATCTCACCTCACCTGTGATCTCACCTCTCACTTTGTTTGCTCCTCTGTCGTTGCTCTCATTCTTGCCGTCACCGTCTCCGTCGCCGTCGCCGTCGCTGAGATTTGAGAAGCAAACCTGTTGAGAGGCGACAGTACTGAGTTTATTTTTATTCTTAACACTTTGTGCTTCCGCCTTCTCATTCTCTTTCACTTAACCATTAACCAATTGATAGAGGAGATAATTGAGTGTAGCCTATCTCGCTCTTTCATGTTCAAGATCCTTATTTATTCCAATTTCCGTCAGTTAATTGATTGATTATGTGAATGAAATAACGACTTCTTAATTGTAATTAGAAGCAATTGTTAATACTCTATTCCTTGTTCTCATCAATCTGAATGTAGGACAGCAATTTTGGTTTTGAAAGTAATTTCGAGTACTTGTGTTTTCCTTTATTTCTAGGGTTCTTTTATGTCAAGTAAAATTATTGTTGAAAATTTATATATTTTGAAGAATTCAGTTTTTAATTGGGGATGTCTCGAACGGGAATCTGTTAGCTCAAATTGCTTGATGTTTTCTTGCTGGATCATATTTCTTGAAATTTATCCAATCCAACCAATCTAAATATATAAGCCCCATTAAGTTTTCTCCAAACATTTATAATATCACTGATTTAGGGTGCTTTTTTGAAAAAATGGAAATCTTAGTTTTGGAACGTGGTGAAGTCTAAAGCTCTAGGAATGGATCCCAAACACACGGGAGAGATTTTGAAGTAAGTTCTTTTCAACGAATTCAGTAGGTGAAATTCCTTTAGTATCTTTGGATGGGATACTGGTCATTAACTTCTAAATTTGTTGTGCAGGCATTTGGACAAGCAGGATGAGATTCTTATGGATGCTTATAGATTAATGTCCCATGAATTACATAAACTTCAGGTTTCCTTTCTTTTGCTCTTGATTTGCTGATTTGTTTGATGAACTTGCATTATCGATTTCATCTTATTTTGAGCTGTATTGTCCACCTTTCTAAGTTTTTACCTTTTAGAAGGATTTAGAAAAAAATCTGACATATTAGTACATATATGATTCTATACGCCTGTCTTTATGTATTAACCTGATTGGCATCCGTGGATATCTGATTCAGTTAGAGATTTTTTATTTTATTTTATTTGGCTCTCATTTTAAGTTCTTAAGCCTCTACGGCTCTGGCTTATGTTCTGATTGCAGAATATAGTCCTTTGAAGTAACTACGAGTACAATGCTATTTTAGACTTTTTAGTACTACAGGATTTCATCGATTTGGATTTTTTTTTTTTTTATGATAACTTACTGTCAATAGAGAAAGACTGGGAGGGAGGTTGCCAAACAATATTTCAGTCTACTTTCAAAAGATATTAATGCAGTTGAAAATTCAAAATCAACTTAATGTTGTTTTATTGTATTAGTCTGTTATATTTGCTCTTGAGATGAAACTTTGCTTTTTGAGAGAAATCCTGGAAATTTTGGGTTACAACTGGAAGGTTGTTGGTTCTATTTCTAGTGCTTGTAATTGCAATTCTAATATTTGCAGGTAGAAGAAGAAATGCTCATGCGCAAGTTTTTTGAAATAATGTCAGCTCATGGTCTAACAAAGAAGGTTGTGATATCCAAATTGCACATAATTATACTTTGGATGTTCTTTTAATGTGCTCAAAGATGTCAAATTCTTAATAAATCTGACCTAATTCTGATCTATCTTGGGAACTTGATTGGATGGAATAAATAGCTTAAAGCTTGTAACAGCGGGTTCCTTCGAGAGTTCGGCTGTTCAGAAGTAGTGCAAGGTTGTCAGTTTCCATTAACTCTATCTTTGACTAGACTAGGTCTCTAATAGCTTCCAGGTCAGGCTAACCAGTTAACTACTAAGGACCACAATGTACACTGAATCAGTATAAAATATTAAAGCACAATGCTAGCATCCTATGCATCCCACTCACTCTTAACTATGATTAAATTCATCTCCCGTTTGAACAAACCACAAAAAGGTTTATAGTGGGTAGAATACATATAGATCATCTGCAATAAATGTCAAGTTAACCAGAGGTATGTTAAGTTGTACTTTCATTAAGGGAACTACCAATTAATATGTTTTTTTTGTGTGGAATATATGGCTGTAAAGGAATATGGTGTTTGATGATTGGCTAGGGATTTAGGAAGGAGCTTGGTGTCACAATCGCACTCTTTGCGACTCACAAAGCGACTGTGCGACACTGATTCTTGTTCTCAAGTCAGCCAACCAACTGAAACTTAGGTTGCTGGTGGCACAATAGGCATATGATTTAACCTCCGCACATTCTTGAAAAATGGTGTTAGAGAAAGTTTTGGAAAACGTTTTGAACGCAACTTTTATAAGCTAGCAAGCAATAAGCCACAACATCAATAACATTGATAGTATGTAACCCTGGTAGGAAGATTTGACAACCAGTTGTATCCATTACATTTGGAGGTAAATTGCATTTGGCAAGTGGAGACATCAAAAGTGGTGAGGAGTAATACACTCACAAAATTACAAGAAAAGTAAATTACTACATTAGAATGAAAAACATATAATAAAAGCAAGGTAAAAGGATTTGGAATGGGCATGCAACTACGGGTAATAGGCCTTAGACATGCATGACCATGACATCCTCCCCACTTAATTGGATGATGTCCTTGTAACTGAATCTACTCAAACTCATCAATGTGAATAGCGACTGTCTGTAGGTCTTCAATGAATTCTCTATTGATCTCTGTGTCAAGGAGTCCCTCCACTATATAAGGAACTCGTGCACATCTCTTTTTGGCTTACCTATTTGTCTTGTTCTCTTAGCTAGAATCTCTTCTTCTTCTTTTTTTGACATTATTATTCATTGTGAGGGGAGGTCGTGTTACCTCATTGTGGCCGTTGTTCTCTAAATCAGAATGGTAGAGGTTTAAGTTACTTACATGGATAACTTGGTGAATCTTCATCCATGAAGGAAATTGGGTCCTGTATGATGCCTTCCTGACCTTCTAAATGACTTCGTCTAGTTCTTCATATTTTCGCACTAGTCACTAATCCTGGTTGCTTCTGAATCAAAACTGTTTTGGTCTTGCAAAACTGTTTTGGTCTTAACATGATCAAAACTTTGTCTCTGACTTGGAATTCCAGTGGCTTTTCAGATCCACCCATTTCTTCATCCGCCTAGATGTTTTCTCTAAGTAATCATGAGCTACTTTAGAGGTTCGTCTTTACGCTTTGGTGAAATTGTAGTCTTGGAGACTCTTTCCAGCATATGGATGGTCAATGACATGAGCCTTTGCGGGCCAAATAAACTCGACATTCAACAAGTTGTCTAGCTATTTTCAAAGTTTGCTAATTCGGGTGGAGCCATACGGTACATATTTTTGGCATGCAGTCTCGCTTCCGATAGTAACTCAGTTTCATGATCTAACCCTCTGTGTGGGGATAAAACTTTAGTTAGCCTTTTTAGAATTACATCATGGTGTTTTTCTAGCAGCCATTGGATCTTTATAAGAACTAGTCTACTCGAGCCTTCATCTTCAACCTCAGGAATGACCATAAAAGTGGGTTCATTGTGGATGGGGCCACATTTCAATTGTTGCGACGATATCATCTTCACCCCCTTTTGAATGTTTGACATTAGTTTAAACATGGTGGGGTTGGATCCCATCACCGAGCATTTTTCTCGGGGTATGAGAATGTCTTTGTGTTTGAATAGGAACTCCTTCCTTAACAATGCTGAAATCGAACATCTTAACAATCACAAAATCATCATGTCCATTCCAAGTTGCCATCTTGATTGTAATTCTCTTTGCAATTCCCAAATTGGGTAGGGTTACCAAATTGACGGCCTTCGTCTTCATATCTCTGTGCCAGAGTATGTTTAAGAACTTTGCTTCGGTCTCTGTCACAAAGTTGTGAATGATTTTAGAGTCGACCATAGTGCTCTTGGTCGATCTATGGTTAACCCAGGTCTCAACATACATAAGTCCCCGTCCACTAACTCTTTCATCTCCCCCCAATTCTCTCTAAAGAACCGATAAGAACTTCTGGCCCCATGCGGGGGTTGTCAATGATTTCAATTGATGGTACTTCAAATTTTGCCATTTTAGATTTAACTTTTGAAGTCGTTATAAATGTTGCTTGGAAGACTTTGAGGGCCGCTCTATTTGAGCACTTAAATACTCGATGGGCCCCTTTATGTATGAAACAGGACAAGGGCCCCGATTATAATTATTTTGGTTGTGCAGTCTCAGCTTAATTTCAACCTCTTAGTTGAAAGGGTTTATAGTCTCCTCTAGTTCCAGGTCTATCGCTAGCCCTTTGGCAAAATTTTGTTTTTTCAGAAAAATCCTAAGTTATCTTCCATCAACTCAGGAAAGTACTTGACGTAGTACGTCTTGGATATTTCTGATGTGTTTCAATTCCCTAGATTTTTCTCTTGTTAATGTCTTGACATTCTCAAGGAAGAATTTGTTGACTCTGGCAATTCAGAGGAAAATGTCGACGAAAAACCAGCCGAAGGTTTCTTTTAAAGAAAAAATAGTAGAAGTAAAAGGAGAGAGGGAGAGAGATTTGCTGAAAACTCGATTTATTTCTCTTCCGTTGAATTTTTTAAATAACAAATCTAATTACAAAAAATAGAAAAGTGGGCTAAGACTTCGCCCAAGTTGGCAGCTAGAATTACGCTCTTCCATTGGCGTGAATTCAGAAGTTTTGAGACGTCAAAACAACCTAACTGAATAAGGAACATAGCTTTTATTTAACAATCTCCTCGTAAAAGCTGTGCTATATCTACCTTATTATTTGAACTCCGATCTTTGAGCGTAGTTCTTCAAATTTTACCCGCGCCAGGAACTTGGTGAAAATGTCTCCAAGTTGTTCCTCTGTTCGGATGAAATCAATCTTGATGAGCCCTCGATCTGCACATTCTCGAATGTAGTGGAATCTGATTTCAATGTGCTTGCTCCAGTCGTGCAAAACTGGATTTTTGATCAGGGAGATCGTAGCTTTGTTGTTTACGTATAACATTGGTGGACTGCTTTCTCTCCCGATGAGTTCTTCCATTAGTCGCGCAAGCCAGATCCCTTGTGTTGCTGCCATCGAAGCGGCGATGTATTCTGCTTTGCAGGAAGACGAAACAACTACCTTCTGTTTTGTTGATTGCCAGTAGATCGTGCCTCCTGAGAGGAAGTAGATCATTCCGCTGGTGCTCTTACGATCATCAATGTCACCGCTGGTGCTCTTACGATCATCAATGTCACCGGCCATGTCACTATCACTGTAGCCGACCAGCTTGAGTTTCTCCTTTCCTCTCCCTGCGCAGTATCTTACACCCCAGTCTCTGGTTCCGGCTACATAGCGCAGGATGCGCTTGACAGCCACTAGATGCTCCTCCCTAGGTGCTTCCATAAACCTGCTCACATATCCAACAAAATAAGCGAGATCAGGACGAGAGTATACCAGATAGCGCAGATTCCCGACAATGCTGCGGCAATTGGTGGAGTCGACTGTCGTCGTAGTGCCAGCCTTCCTTAGTTAGAGACGGGCCTCCATTGGCGTCCTTGTAGGATTACTGTCCACAAGCCCAGTTGTGTCCAGCAGCTTTTTCGCGTATGCACTTTGGCAGATGGAGATGCCGATAGAGTTCTGTTGTATTTCGATGCCGAGGCAGTAGCTGAGCACGCCGAGATCGCTCATCTCGAAGTTCTTTGACATCTCCTTCTTGAACCTTCCAAGGACTTCCACGTCGCCTCCAGTGTTTATGAGGTCGTCGACGTACACTCCCACGATCAGTCGCTACTTGTTATGGCCGTGCGTGTACATGCCATGCTCAGAGGCACAACGCTTGAATTTCAATGACAGTAGGGTACTGTTGAGCTTTGCGTTCCAGGCTCGTGGGGCTTGTCGAAGCCCGTAGAGTGCTTTGTGCAGATGCAGTACCTTATCGGGGTTATCGTTGTCCAGGAAGCCAGGTGGTTGTCGGACGTAGACGGTCTCCTTCAGCTCTCCGTTAAGGAAAGCAGACTTCACGTCTATATGGTGAACCTCCCAAGAGTAATGTGCCGCAATTGCCAGCAAGAGACGGACGGATTCTAACCTTGCCACTATCGGAAATACCTCTTCGAAGTCCACTCCTTACTTCTGGACGTAGCCCTTCGCCACCAGATGGGCCTTGTGCTTCACAACTCTTTTTCGTTGCGCTTCAGTTTGAAGACCCATTTGAGCCCTATGGCTCGGTGTCCCGGCGGCATATCCTCCAAACTCCACGTCTGGTTCTCGGTGATGGATGTCATCTCCTCCTGCATTGCCTTCAGTCAGCATGGGTTTCTTTCTGCTTCGCCGAAGGTGTTCGGTTCATTTGCACTGATGGCATGCAGTTCGGCCACTTCTTCGAGCTCGCGCGTTGCCAGTCCAGGTGGTTCACCTCCTCCCACTAGGTCGTCCATCCTCCAGTACCTAGCCTCCAGATCAGCATCGTGATCGGCTTCCAGCGTCGAATCCGCAGTCCGTGTTGTTGCGAATTCCACTGGTTCAGGGGTTGCACCTGCTGGCGGCAGTGACGGCTCCTGATGCTGGGCTCCTTCCGGCTCGGTGACGAAGTACTCCACCGTGAATTTATTTGGATTATGGTTTGCCTCGATCACGTCATTCCACTGCCAGAAGGTGCTTTCGTCGAAGACAACGTCGCAAGACACGTGAGCTCGCCCCCTTACAGGATCATAGAGTCTGTACGCCTTGCTCCCGGGTTCATAGTCGATGAAGACGACCTTCAACCCCCTAGGATCGAGCTTGGCGAGGTGGGGACGTGTTACCTTCATGTATGCGACGTAGCCGAACACGCGGAAATGATGTACCGCTGACTTTTTGTTGTACCAGGCCTCATATGGCGTCTTCCCATCGAGGCTTCGGGTTGGTGACCGATTGAGGAGATAGACGGCCGTCATTACCGCCTCTCCTCAGAATCTCCCAGGCATCCCAGCCGTCACCAGCAATGACCTCGCTGTCCCGACGATGGTCTGATTTCGGCGCTCCACCACTCCGTTCTGTTGGGGGGAGTAGGGCGCCGTTAGGTGCCGTTGTATGTCGATCTCATTGCAGTACTTATCGAAACTTGTCGAGGTGAATTCTCCGCCTCGGTCTGTGCGCAGCACTCGCATCTTCTTCTCAATTCGGCTTCCGCTCGTGCTTTAATGCGCTTAACCACCTCTGCCGCCTCACTTTTCGCTTGCAGCAGGGTCAGCCACATGAAGTGGCTTTTGTCATCGACTATCAAGAGGAAGAGACTCTAACTGCCTGGGGTCGTCGGCTTGATGGGCCAGCAGATATCGCCGTGCACAAGCTCCAACAGCTCATCGGCACAGTAGGATGTTCGAGACGGAAAGGGTGTGCGCCTTTATTTACCGATGAGGCACACGTCGCACAGCTTGTTCATGCCTTTGATTGCCGGCAAACCGTGCACCAACTCCTCCTTCTGTAGCTTTTCTAGAGCAAGAAAGTTTAAGTGCCCGTATCTTGCGTGCCACCTCCAAGATACCTCTTGGTCTTGGCTGAGAGGCTGACGAGTTGCTCTATCTCTAACTCCAGGATGTAAAGACAGTTTGTCGTGCGTCAAACCTGAGTGAGCAGCCGTCGTTGATTATCGCAGATTTTGAGGAGTCCGCGCTCGATGGAAATGAAGCAGCCTGTCTCATCGTGTTTACCCAGGCTCACAAGGTTAGCCTTGAGCCTAGGGATGAAGTAGACGTCGGTCAGCTTGCGGTGCTCGCCTCCCTTGCTGACGAACAGGATAGTGCCACGCCCTTCGATCTCGACGACGAAGCCGTCGCCAAATTTCACCGTCCCGCGAATCCCCGAGTCGAGCTCGAAGAACGCAGATCTAGCTCCGGTCATATGGTTTGTTGCCCCTATGTCGAGGATCCATCGCCGGTGCTCGTGTTGCTTGTCCCTCTCGCCGATTTGAGCGAACACTCGCTTCTTCTCCAGTTGAATTGGCTCCCTAGCTGGTGCCGCCTTTGCTACGCCCAGCTGAAGCTCTTTCTCGGGTTCGACGTCGTCGTCGATTACCTCCACCTCCGTGGATTTGGAATCGAAATTGGGGACGCATGCACTTACCATGAAGAGAGCTGGCTCGTCCTCCTCGGATTGAGCCACATGGGCCTTTTCGGCCTTCTCTTTGTTCCTGAACTTGCTCCAACAATTCTTGCTCAGGTGACCTCTCTTCCCACACTGGATCGGCCTGCCATTGGTCGACTTCTTCTTTTGATCCCCATCTTCCCCGCGCGTAGACGTTACTTGACAGCTGAAGCTGTATTTTTCTTCCGCTGCTCGACGTTACGCAGTCTTTCGGTCACCTCTTCCACTGTTAGGTCGTTCACGTCAAGCAATGTCTCGATTGAAATCACGACTTGCTCGAGGTGATCGGGGACGACCTATTGGCAAGCCCTGTGATCTGCATTGAAAAATCATCGACGAATTCGCCGTCCTTAAAGCGGATCTCCAAGAGCTCTTCTGCAGCTGCTCGATGTTGGATTCCCGCACACGCTGTACACTGACCCGACGGGATTTGATTCCCTCCCAGGCCGATTGCTCGGTACACTTAGTGGAAAGAGACGCCAGCATCTCTGGGGAACAGATTGTAATATGGTGGCGAACGCTAGCCGAGACGCCAGCATCTCTGGGGCACAGATCGTAATATGGCGGCGAACGCCAGCCGATCCTCCCGGTACTCGATCGTTTCTCCTTCCTCTGGCTCGACAGCATGCCATAACCCTTGCGCTTGTAGGTTGACGAGCATCAACAAGGCCCACTCATTGTAGTTGGACCTTGTTAACATCGGGTACTGAACGGTGGCGGCGGTCGTTGTCTCTCTTATCACTCGCTCAACAACAACTCGACGTCCGTCATCACGGCGTCGACCTCTTTGTGGCGGTGATGAGGCGGTCATTGTCTCTCTTATCACTCGCTCAATAACAACTCGACGCCCGTCATCACGGCGTCGACCTCTTTGTGGCGGTGATGGAGATGCCAGCACACGGCGGCAGCGTGGAGGAGTGAGTGAGCCTACCCGGGAAGGACCCCACGATGTGTGTTTTCACGCGTGTGTTGTTAGATCGACACTCTAACCACTTGAGCTATTCAACTTGACTGTTGATAAGATTGGCTCCTCCGAAATAATATACCACCGATGGCTTCGACCTGGCTCTGATACCACTTGTTGACCCTGGCAATTCGGAGGAAAATGTCAACGAAAAACTAGCCGAAGGTTTCTTCTAAAGAAAAAATAGTAGAAGTAAAAGGAGAGAGAGAGAGAGATTTGCTGAAGACTCGATGTTTTATTTCTCTTCCGTTGAATTCTTTAAATAACAAATCTAATTACAAAAATAGAAAAACTAATTACAAAAAATAGAAAAGTGGGCGAAGACTTCGCCCAAGTTGGCAGCTAATTACGCTAGAATTACGCTCCTCCATTGGCGTGAATTCAGAAGTTTTGAGACGTCAAAACAACCTAACTGAATAAGGAACATAACTTTTATTTAACAGAATTTTGATTGAAGTTTTTACTTTTATCTCTCCCAAGTGTTGGTTGTACATCAACCGTCTTGAATATTCATATACCTAGATCTCCACCACAACTTCGCATCGTTAGCTAGATGTATTGTTGCTAACGTAATATTTGCTTCCTCTGCCATAGTATTTATGGTTCAAAAGTACTATTCAAGGTCGAAGATAGAGTTCGCTAGATTCTTGGCATCTTGAACCTTCCGGAAGGACTTAGGCTCTAGAACCTTTAGATGGTTAAACTGGATCGAATCCCCTGCTAGGGTTTAGTTCTCCATTGCTCTCGATTGTTAAACTGGATCGAATCCCCTACTAGGATTTAGTTCTCCATTGCTTTCATGTGAGGTTAGTTTTAGTTCTCCATTGCTCTCATGCATAAGAGGTTTAGTGTGATCCAGAAGCCACCACTCTCTAACTACCTCAAGAGAAACTTTTACATCTTCAGAAAGGTCTGAGATCATCTGAACTATAGCCTTTCGAGAGTTTTCTAAACCTTTGACACGCTTCTCCATGTGGACAACCGAGCTTGTCGACCTATCCCCACGCCTGAACCAATCAACCGTGTGATTTTGTCTTTTAAGATCTCAACCTTGAACATCAATTCTTGGATAGGAATCTCGTCTAGGCGGCTAGCTACTATGTTAATTTTGTCGGTTTTGGTGGAAATCTCATCCAGATGAGAATCCAAAAACCAAATATTGTCAGGGACTTCATGTAGATAGAACATCTACTCTTTGATCTGGACCAATTAGTCAACACGAGAGACTTGCCCAACTGCTTAGTTGTCGACATGTTTACTAATTTCACTCTACGAATTGACTTAGTTTTGTTCCATTTGTCACAATCGCACTCTTTTGAGACTCACAAAGCGATTTTGTACCACTTACTTTCACCTTCGAGTAAGTCAACCAACTAAAATCGTTGGTGGCACAAATAGTCTATCCGCCTCCGTCCTGTTTTTTAAAGTGATTTTAGAAATGAGGTTAGAGAAGGTTTTGAAAAATATTTTGAAGCAATTTTAGAAAAGAAAATGTTATAAGCTAGCCAGCAATAAGGGACAACAACATTAATAGCATATAAATAGGGTAGGAAGATTCGACAGCTAGTCATATCCTCCTATAGTGCATTTTAAGGCAATTTCCTTTGGTAGACGTAGACATCAAAAGTGGCGGAGAGTCATACACTCACAAAATTACAAGAAAAATAAATGACTACACTTGAATGAAAAACATACAATAAAAGTGAGGTAAAAGGGTTAAATGGGCATGCGATCATTGGCAACATGCATTGGACAATCATAACCGTGACACTTAACAATCTAAAGTTAGTTATTCTCGCTCATTTAGGAAATGAGCCTTTTCTTCCGTAAGGGTGGTAGGGTAAGTGTGACTTGTGTTTTGGTTTTAGGTATGGTCCTCCTTGTGATAGAGTTGTTTTGGCTTTATTTTGTTTGGTTCAAGCTTTGTAAATTTCAGTTTCTTCATGAAAAGTGTCATTAATGTTTTCCCCCCCTAAAATAACTTGGAATGAACTTTATCTCAAATTGAAGCTACAACAAGAGAGTATCTAGAGGGAAGTAATCTTATAGATCTTCCGTGATAAATGTCAAGTTGATGTCAGCCCATCTGGAACATCAAGAATATAAGCATTTTACTTTTTGTTTTTGATAATTTAGCAAGGGCCCTTCTGTCTTTTGTTCCAGTAATTGTATCTAGTCCTAGTTCTCCAAGATTTACTATAACAAGGTACCAACTTAAAGTTCTTTTTGTTCTTTAGCATTATCCTTGAAAGTTGTTCGATAGTCACTTCCCTTGTGCAAACAAGAGATGCTCTACAATTTCGGTTGCCTCTAGGCTAACATCTATGGATTGAGGCAAGGTGATTAAATCGTCTTGCATGAAAGTTCGACATGTAGAATCTGAAAAGAAGATATACGCAGTTTTTCTACATTTGATTAAAAGAATATCAACTTCAATGGCATGAATCTCATTTCTAAGCCTTAGATCCACATAAGCTTCTTATCATACTCTCTAGACTGTAATAAGTTGGAGATTTTACTGAAGCAGCGCGCGGCACAATGGAGGCAAACGTAGTTCTTGAACCTTCACCTTCTTTGGGATCACTTTAGTTGACTTTGTTTATTTTGTCTCTTAGTGGGACCTGCTGCATTCCTTTTCTTTCTAATGGTTTGCCTTTGTAGTATTCTTCCTGTTACAGGCTTTCTTAACTTGGCTTATTGCTTAACAATTTCATATTTTAGCCGCCTAGTGAACAATATCTAAAAGTTCTACTATTTCTCTTACCCCACAAATCCTACGGGCAAAACTTCCACTTTTCATGTGAGATCCCACATCGGTTGGAGAGGAGAACGAAGTATTCTTTGTAAAGGTGTGGAAACCTTTCCCTAGTAGACGTGTTTTTAAAATCTTGAGGGGAAGTTCGAATGGGAAAACCCAAAAAGGACAATATTTGCTAGCAGTGGGCTTAGGCTGTTACATTTAATCTTTCCTTCTCTAAAAAAAAAAAAAAAAGAGGTGGATGGAGAAGGAACTCCGGAACTCCTTGATTATCTTCCTGCAACTTCTTTGAATGTCAAACTAAAAGCCAAACACATCACAAAAGAGTTTCTAAAATCCCACAAAAACTGAGCCTAGTCAACAAACCTGCTTAAGTCATGTTGAAGTGTTTCTAAGAGGAGCTGGATGGATTAAAATCCCACCCCCCATATCGTTGAGAAAATGCATTAACTTCTATTTATATGTTCTCTATTTGAGTTGACTTATTTAGATTCCTACTAGGATTGCGCAATGCACATGTTCTAGCTGTTGCTCCTTGGGATCTAATTAAACTAGTATGTTGTCAAAATCAACCACTATAAACTCACAAGAAATTATTTTGATACTTGTTCTATCAACTTCATGTCGTGTATGTGCTTGTAGTATTGTTTAATGAGAAATGCATAAGAGTCCTTAATTATTGTTTATAGAGTTTTTATATTCCAATACTCTACTTCTACTTCTAGGATGTATGAAAATAGACCATAAGTTGGTCTAGTGGTAGCTTCAAGAAAAAGTCTGCGACAATTTATCATCGTTATCTTGTTCCACTCGTTGAGTTTATTAAAAATTTATTTTGTGCATTGCAGAGTGAAGATGGTCTTGTTAGTTCTATTAGCAGAGGGGATGCGTTAGCTATATCTAATACTGACGCTAAAAGGTAAAATTACCACGACCTCTAACTCACTGTGAAAGGAAAGTCTCAATGTGACTCACATTTATGTAATTTTTTTTCTCCATAGTATAAACTAAAATTTTGATCATATGTAATTACAATTACATAAG

mRNA sequence

CATCCTCTTCTCTCACCCCACCTGTGATCTCACCTCACCTGTGATCTCACCTCTCACTTTGTTTGCTCCTCTGTCGTTGCTCTCATTCTTGCCGTCACCGTCTCCGTCGCCGTCGCCGTCGCTGAGATTTGAGAAGCAAACCTGTTGAGAGGCGACATTTTGGAACGTGGTGAAGTCTAAAGCTCTAGGAATGGATCCCAAACACACGGGAGAGATTTTGAAGCATTTGGACAAGCAGGATGAGATTCTTATGGATGCTTATAGATTAATGTCCCATGAATTACATAAACTTCAGGTAGAAGAAGAAATGCTCATGCGCAAATTCCTACTAGGATTGCGCAATGCACATGTTCTAGCTGTTGCTCCTTGGGATCTAATTAAACTAAGTGAAGATGGTCTTGTTAGTTCTATTAGCAGAGGGGATGCGTTAGCTATATCTAATACTGACGCTAAAAGGTAAAATTACCACGACCTCTAACTCACTGTGAAAGGAAAGTCTCAATGTGACTCACATTTATGTAATTTTTTTTCTCCATAGTATAAACTAAAATTTTGATCATATGTAATTACAATTACATAAG

Coding sequence (CDS)

ATGGATCCCAAACACACGGGAGAGATTTTGAAGCATTTGGACAAGCAGGATGAGATTCTTATGGATGCTTATAGATTAATGTCCCATGAATTACATAAACTTCAGGTAGAAGAAGAAATGCTCATGCGCAAATTCCTACTAGGATTGCGCAATGCACATGTTCTAGCTGTTGCTCCTTGGGATCTAATTAAACTAAGTGAAGATGGTCTTGTTAGTTCTATTAGCAGAGGGGATGCGTTAGCTATATCTAATACTGACGCTAAAAGGTAA

Protein sequence

MDPKHTGEILKHLDKQDEILMDAYRLMSHELHKLQVEEEMLMRKFLLGLRNAHVLAVAPWDLIKLSEDGLVSSISRGDALAISNTDAKR

Homology

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BLAST of CmaCh11G011500 vs. TrEMBL
Match: A0A0A0LF72_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G824790 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-14
Identity = 49/73 (67.12%), Postives = 54/73 (73.97%), Query Frame = 1


Query: 1   MDPKHTGEILKHLDKQDEILMDAYRLMSHELHKLQVEEEMLMRKFLLGLRNAHVLAVAPW 60
           MDPKHTGEILKHL+KQ E LMDAYR MSHELHKLQVEEEMLMRKF   + +AH       
Sbjct: 87  MDPKHTGEILKHLEKQGEFLMDAYRSMSHELHKLQVEEEMLMRKF-YEIMSAH------- 146

Query: 61  DLIKLSEDGLVSS 74
            L+K +ED   SS
Sbjct: 147 GLVKKNEDDRNSS 151

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BLAST of CmaCh11G011500 vs. TrEMBL
Match: A0A103Y9I3_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_016677 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 5.2e-13
Identity = 38/45 (84.44%), Postives = 43/45 (95.56%), Query Frame = 1


Query: 1  MDPKHTGEILKHLDKQDEILMDAYRLMSHELHKLQVEEEMLMRKF 46
          MDPK+TGE+L+HL+KQDE+LMDAYR MSHELHKLQVEEEMLMR F
Sbjct: 1  MDPKYTGEMLRHLEKQDELLMDAYRSMSHELHKLQVEEEMLMRAF 45

[Close]

BLAST of CmaCh11G011500 vs. TrEMBL
Match: A0A059DEI8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01208 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 7.4e-12
Identity = 37/45 (82.22%), Postives = 42/45 (93.33%), Query Frame = 1


Query: 1  MDPKHTGEILKHLDKQDEILMDAYRLMSHELHKLQVEEEMLMRKF 46
          MD K++GE LKHL+KQ+E+LMDAYR MSHELHKLQVEEEMLMRKF
Sbjct: 1  MDAKYSGETLKHLEKQNELLMDAYRSMSHELHKLQVEEEMLMRKF 45

[Close]

BLAST of CmaCh11G011500 vs. TrEMBL
Match: E0CU98_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0036g00920 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 9.7e-12
Identity = 36/45 (80.00%), Postives = 42/45 (93.33%), Query Frame = 1


Query: 1  MDPKHTGEILKHLDKQDEILMDAYRLMSHELHKLQVEEEMLMRKF 46
          MDPK+T EIL+HL+KQ+++LMDAYR MSHELHKLQVEEEMLM KF
Sbjct: 1  MDPKYTAEILEHLEKQNDLLMDAYRSMSHELHKLQVEEEMLMHKF 45

[Close]

BLAST of CmaCh11G011500 vs. TrEMBL
Match: B9HQQ0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s00980g PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.7e-11
Identity = 36/45 (80.00%), Postives = 41/45 (91.11%), Query Frame = 1


Query: 1  MDPKHTGEILKHLDKQDEILMDAYRLMSHELHKLQVEEEMLMRKF 46
          MDP++TGEILKHL+KQ+E+L  AY  MSHELHKLQVEEEMLMRKF
Sbjct: 1  MDPRYTGEILKHLEKQNELLTSAYNSMSHELHKLQVEEEMLMRKF 45

[Close]

BLAST of CmaCh11G011500 vs. TAIR10
Match: AT4G37608.1 (AT4G37608.1 unknown protein)

HSP 1 Score: 55.8 bits (133), Expect = 1.5e-08
Identity = 29/55 (52.73%), Postives = 39/55 (70.91%), Query Frame = 1


Query: 1  MDPKHTGEILKHLDKQDEILMDAYRLMSHELHKLQVEEEMLMRKFLLGLRNAHVL 56
          M+P+HT ++LKHL+KQ E+L +A + M  EL KL+VE E +MRK L  L N H L
Sbjct: 1  MEPQHTDDVLKHLEKQTELLKEAQKNMLQELQKLEVEHETMMRK-LYELMNTHSL 54

[Close]

BLAST of CmaCh11G011500 vs. NCBI nr
Match: gi|700204401|gb|KGN59534.1| (hypothetical protein Csa_3G824790 [Cucumis sativus])

HSP 1 Score: 87.0 bits (214), Expect = 1.8e-14
Identity = 49/73 (67.12%), Postives = 54/73 (73.97%), Query Frame = 1


Query: 1   MDPKHTGEILKHLDKQDEILMDAYRLMSHELHKLQVEEEMLMRKFLLGLRNAHVLAVAPW 60
           MDPKHTGEILKHL+KQ E LMDAYR MSHELHKLQVEEEMLMRKF   + +AH       
Sbjct: 87  MDPKHTGEILKHLEKQGEFLMDAYRSMSHELHKLQVEEEMLMRKF-YEIMSAH------- 146

Query: 61  DLIKLSEDGLVSS 74
            L+K +ED   SS
Sbjct: 147 GLVKKNEDDRNSS 151

[Close]

BLAST of CmaCh11G011500 vs. NCBI nr
Match: gi|659085339|ref|XP_008443366.1| (PREDICTED: uncharacterized protein LOC103486972 [Cucumis melo])

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-13
Identity = 41/45 (91.11%), Postives = 42/45 (93.33%), Query Frame = 1


Query: 1  MDPKHTGEILKHLDKQDEILMDAYRLMSHELHKLQVEEEMLMRKF 46
          MDPKHT EILKHL+KQDE LMDAYR MSHELHKLQVEEEMLMRKF
Sbjct: 1  MDPKHTVEILKHLEKQDEFLMDAYRSMSHELHKLQVEEEMLMRKF 45

[Close]

BLAST of CmaCh11G011500 vs. NCBI nr
Match: gi|976920256|gb|KVI04989.1| (hypothetical protein Ccrd_016677 [Cynara cardunculus var. scolymus])

HSP 1 Score: 81.6 bits (200), Expect = 7.4e-13
Identity = 38/45 (84.44%), Postives = 43/45 (95.56%), Query Frame = 1


Query: 1  MDPKHTGEILKHLDKQDEILMDAYRLMSHELHKLQVEEEMLMRKF 46
          MDPK+TGE+L+HL+KQDE+LMDAYR MSHELHKLQVEEEMLMR F
Sbjct: 1  MDPKYTGEMLRHLEKQDELLMDAYRSMSHELHKLQVEEEMLMRAF 45

[Close]

BLAST of CmaCh11G011500 vs. NCBI nr
Match: gi|747102400|ref|XP_011099364.1| (PREDICTED: uncharacterized protein LOC105177808 [Sesamum indicum])

HSP 1 Score: 80.5 bits (197), Expect = 1.6e-12
Identity = 36/45 (80.00%), Postives = 44/45 (97.78%), Query Frame = 1


Query: 1  MDPKHTGEILKHLDKQDEILMDAYRLMSHELHKLQVEEEMLMRKF 46
          MDPKH+G++LKHL+KQ+E+LMDAYR MSHELHKLQVEEE+LMRK+
Sbjct: 1  MDPKHSGDMLKHLEKQNELLMDAYRSMSHELHKLQVEEELLMRKY 45

[Close]

BLAST of CmaCh11G011500 vs. NCBI nr
Match: gi|694409374|ref|XP_009379325.1| (PREDICTED: uncharacterized protein LOC103967751 [Pyrus x bretschneideri])

HSP 1 Score: 78.6 bits (192), Expect = 6.3e-12
Identity = 46/85 (54.12%), Postives = 61/85 (71.76%), Query Frame = 1


Query: 1  MDPKHTGEILKHLDKQDEILMDAYRLMSHELHKLQVEEEMLMRKFLLGLRNAHVLAVAPW 60
          MDP++TGEILKHL+KQ+E+LM+A   MS ELH+L+VEEEMLMRKF   + +AH       
Sbjct: 1  MDPRYTGEILKHLEKQNELLMEAKISMSEELHQLKVEEEMLMRKF-YEIMSAHGKVKKNG 60

Query: 61 DLIKLSEDGLVSSISRGDALAISNT 86
          D  K+S+DG + S     ALA++NT
Sbjct: 61 DGGKVSDDGEIGS---STALAVANT 81

The following BLAST results are available for this feature:

BLAST of CmaCh11G011500 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh11G011500 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LF72_CUCSA	1.2e-14	67.12	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G824790 PE=4 SV=1	[more]
A0A103Y9I3_CYNCS	5.2e-13	84.44	Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_016677 PE=4 ...	[more]
A0A059DEI8_EUCGR	7.4e-12	82.22	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01208 PE=4 SV=1	[more]
E0CU98_VITVI	9.7e-12	80.00	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0036g00920 PE=4 SV=...	[more]
B9HQQ0_POPTR	1.7e-11	80.00	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s00980g PE=4 SV=1	[more]

BLAST of CmaCh11G011500 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G37608.1	1.5e-08	52.73	unknown protein	[more]

BLAST of CmaCh11G011500 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700204401\|gb\|KGN59534.1\|	1.8e-14	67.12	hypothetical protein Csa_3G824790 [Cucumis sativus]	[more]
gi\|659085339\|ref\|XP_008443366.1\|	1.1e-13	91.11	PREDICTED: uncharacterized protein LOC103486972 [Cucumis melo]	[more]
gi\|976920256\|gb\|KVI04989.1\|	7.4e-13	84.44	hypothetical protein Ccrd_016677 [Cynara cardunculus var. scolymus]	[more]
gi\|747102400\|ref\|XP_011099364.1\|	1.6e-12	80.00	PREDICTED: uncharacterized protein LOC105177808 [Sesamum indicum]	[more]
gi\|694409374\|ref\|XP_009379325.1\|	6.3e-12	54.12	PREDICTED: uncharacterized protein LOC103967751 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G011500.1	CmaCh11G011500.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37718	FAMILY NOT NAMED	coord: 2..45 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh11G011500	Csa3G824790	Cucumber (Chinese Long) v2	cmacuB132
CmaCh11G011500	ClCG10G015420	Watermelon (Charleston Gray)	cmawcgB086
CmaCh11G011500	CSPI03G38670	Wild cucumber (PI 183967)	cmacpiB129
CmaCh11G011500	CmoCh11G011920	Cucurbita moschata (Rifu)	cmacmoB112
CmaCh11G011500	Lsi03G015170	Bottle gourd (USVL1VR-Ls)	cmalsiB114
CmaCh11G011500	Cp4.1LG04g00440	Cucurbita pepo (Zucchini)	cmacpeB147
CmaCh11G011500	MELO3C030975.2	Melon (DHL92) v3.6.1	cmamedB137
CmaCh11G011500	CsaV3_3G041080	Cucumber (Chinese Long) v3	cmacucB0149
CmaCh11G011500	Cla97C10G198270	Watermelon (97103) v2	cmawmbB094
CmaCh11G011500	Bhi11G002448	Wax gourd	cmawgoB0096
CmaCh11G011500	CsGy3G036200	Cucumber (Gy14) v2	cgybcmaB299
CmaCh11G011500	Carg25018	Silver-seed gourd	carcmaB0342

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh11G011500	Cucumber (Gy14) v1	cgycmaB0924
CmaCh11G011500	Melon (DHL92) v3.5.1	cmameB124
CmaCh11G011500	Watermelon (Charleston Gray)	cmawcgB117
CmaCh11G011500	Watermelon (97103) v1	cmawmB088
CmaCh11G011500	Watermelon (97103) v1	cmawmB104