Carg08744 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACTCCCTCGCGAAGACGCCTATGCCCGAAGCATTTTCGCGGGCTTAGGGTTTAAGGACCGCTTGCTCTGCTCTAAAACCCTAAGAATATGCAGTCGCAATCCTTCTCTCGTGGCCTTCCCCCGGCTCTGGTCGGATTACAGGATGGCCGTTCTCGCTTTCGTCGAATGGTGAGTACTTGCTACCAATGTTTAATCAATGATTTTTCTGTCATTCGGAAGTAACATTGTAGTTTCGCTCTTCATTTCTTCTCAAGCAATTGGGAAACCGGTGGAAACAAGGAGAACAGCTTGAATTTTCATCCAAACAGCTTCAATTTGCATCCAAGTGTATGTTTTCTTTTATTCTTGTGTCTGCGTGTGTATTTTATTTATTTATTATTTTTTTTTTTCCTGGATCAGCCTGGTAAGAGTTAGTACTGAGCGAGAGATTTCTGCTAAAACAATTTTGCAGGGGATGTGTTGAAGAGGAAGAGAGGGGCGTTCATGTGCGTGGCTGATTCTAACGGGAAGCCTCAGTTGGAATCATCTGTAAAGGAAAATCGTGTATTGTATGTTAGTGCATTGAATGGAGTGGAGCCTTGTCGTGGGAAATCCGGCTCTGTCTCATTTCATGGTCTCACTCACCAGTTGGTAGAAGAGGGTAAATTGATGTCAGCTCCTTTTAGAGAAGACAAGGGCTCTCTCCTCTGGGTACTAGCTCCTGCAGTGTTTATCTCATCTTTGATTTTTCCTCAAGTTTTCCTTGGCGATCTAATTGAGGCTTACTTCAAGGAGGAGATTCTCGTAGGTAGTATTGAACCGAGTTCATTTTATATTATGATTACTGGGGTTTCCTTTTGTCTGCTGTTTGTTTCATTCCATTGTGTGCGGCATATTGTTATCTAACGCAATACATTTGCATGGTTCAAGCAGAAGTTGTGACTTCATTGGTGTTTGAAGTCCTATTTTATGTCGGAGTTGCTGCGTTCCTGCTCGTGACCGATCGTGTTCAAAAACCATACTTGCAATTCAGCTCGAAGAGGTGGAGTCTCATTACAGGCCTTAGAGGATACTTGACAACAGCTTTCTTCATTGCTGGCTTCAAGGTTGTAGCTCCACTATTTGCCGTCTATGTAACTTGGCCGATGATTGGCCTGCCTGCCCTCGTTGCAGTGTTTCCATTTCTGGTTGGCTGTATCGTTCAGTTGGCATTTGAAACCCATGTTGATAGGCGTGGCTCAGCTGCTTGGCCACTCGTTCCAATCATTTTTGAGGTACTTCACGTATAGTTAGTTATAAGTAACTCATTCCTCGTTGCTTTCAAAGAGTAAACAAGATCTTTTACAAAACGAATCAACTTGCAGGTTTATAGACTTTACCAGTTGACAAAAGCTTCCCATTGTATGGAGAGGTTGATGTTCCAAATGAGAGGGCTTCCCAACACTCCAGAATTGTTGGAAAAAAGTGGAGCTATTTTTTCTATGATGATAACCTTTCAAGTCCTGGGAGTGATATGCCTCTGGTCGCTAATGACTTTTCTTTTGAGGCTTTTTCCTTCCAGACCTGTGGCAGAGAATTACTAGTGTTGTGTAGCATTCTGTACATTCTATTTTCAGGGTTAGTTAACTCTTAATTACAATTTATTTTGTTGCAAGGACGTCTAGAACATTTTATCATGATTTGTTCATTGAGCTCCATATTGTCCTACCCCATCAATTGATATTCAAATCTTCAGCTTCCTCCTCAGAAGTTTTAAGGAAAAATCAGGACTTGCCATCCTGTTTGATTTGAGTTAATTTTCTTCACTCTTCTGCTTGATCACTTCAGTTCTCACAAGTACGTACATTCCTCTTCTCTACGTTGATTTTCTTTGATCTGT CACTCCCTCGCGAAGACGCCTATGCCCGAAGCATTTTCGCGGGCTTAGGGTTTAAGGACCGCTTGCTCTGCTCTAAAACCCTAAGAATATGCAGTCGCAATCCTTCTCTCGTGGCCTTCCCCCGGCTCTGGTCGGATTACAGGATGGCCGTTCTCGCTTTCGTCGAATGCAATTGGGAAACCGGTGGAAACAAGGAGAACAGCTTGAATTTTCATCCAAACAGCTTCAATTTGCATCCAAGTGGGATGTGTTGAAGAGGAAGAGAGGGGCGTTCATGTGCGTGGCTGATTCTAACGGGAAGCCTCAGTTGGAATCATCTGTAAAGGAAAATCGTGTATTGTATGTTAGTGCATTGAATGGAGTGGAGCCTTGTCGTGGGAAATCCGGCTCTGTCTCATTTCATGGTCTCACTCACCAGTTGGTAGAAGAGGGTAAATTGATGTCAGCTCCTTTTAGAGAAGACAAGGGCTCTCTCCTCTGGGTACTAGCTCCTGCAGTGTTTATCTCATCTTTGATTTTTCCTCAAGTTTTCCTTGGCGATCTAATTGAGGCTTACTTCAAGGAGGAGATTCTCGTAGAAGTTGTGACTTCATTGGTGTTTGAAGTCCTATTTTATGTCGGAGTTGCTGCGTTCCTGCTCGTGACCGATCGTGTTCAAAAACCATACTTGCAATTCAGCTCGAAGAGGTGGAGTCTCATTACAGGCCTTAGAGGATACTTGACAACAGCTTTCTTCATTGCTGGCTTCAAGGTTGTAGCTCCACTATTTGCCGTCTATGTAACTTGGCCGATGATTGGCCTGCCTGCCCTCGTTGCAGTGTTTCCATTTCTGGTTGGCTGTATCGTTCAGTTGGCATTTGAAACCCATGTTGATAGGCGTGGCTCAGCTGCTTGGCCACTCGTTCCAATCATTTTTGAGGTTTATAGACTTTACCAGTTGACAAAAGCTTCCCATTGTATGGAGAGGTTGATGTTCCAAATGAGAGGGCTTCCCAACACTCCAGAATTGTTGGAAAAAAGTGGAGCTATTTTTTCTATGATGATAACCTTTCAAGTCCTGGGAGTGATATGCCTCTGGTCGCTAATGACTTTTCTTTTGAGGCTTTTTCCTTCCAGACCTGTGGCAGAGAATTACTAGTGTTGTGTAGCATTCTGTACATTCTATTTTCAGGGTTAGTTAACTCTTAATTACAATTTATTTTGTTGCAAGGACGTCTAGAACATTTTATCATGATTTGTTCATTGAGCTCCATATTGTCCTACCCCATCAATTGATATTCAAATCTTCAGCTTCCTCCTCAGAAGTTTTAAGGAAAAATCAGGACTTGCCATCCTGTTTGATTTGAGTTAATTTTCTTCACTCTTCTGCTTGATCACTTCAGTTCTCACAAGTACGTACATTCCTCTTCTCTACGTTGATTTTCTTTGATCTGT ATGCAGTCGCAATCCTTCTCTCGTGGCCTTCCCCCGGCTCTGGTCGGATTACAGGATGGCCGTTCTCGCTTTCGTCGAATGCAATTGGGAAACCGGTGGAAACAAGGAGAACAGCTTGAATTTTCATCCAAACAGCTTCAATTTGCATCCAAGTGGGATGTGTTGAAGAGGAAGAGAGGGGCGTTCATGTGCGTGGCTGATTCTAACGGGAAGCCTCAGTTGGAATCATCTGTAAAGGAAAATCGTGTATTGTATGTTAGTGCATTGAATGGAGTGGAGCCTTGTCGTGGGAAATCCGGCTCTGTCTCATTTCATGGTCTCACTCACCAGTTGGTAGAAGAGGGTAAATTGATGTCAGCTCCTTTTAGAGAAGACAAGGGCTCTCTCCTCTGGGTACTAGCTCCTGCAGTGTTTATCTCATCTTTGATTTTTCCTCAAGTTTTCCTTGGCGATCTAATTGAGGCTTACTTCAAGGAGGAGATTCTCGTAGAAGTTGTGACTTCATTGGTGTTTGAAGTCCTATTTTATGTCGGAGTTGCTGCGTTCCTGCTCGTGACCGATCGTGTTCAAAAACCATACTTGCAATTCAGCTCGAAGAGGTGGAGTCTCATTACAGGCCTTAGAGGATACTTGACAACAGCTTTCTTCATTGCTGGCTTCAAGGTTGTAGCTCCACTATTTGCCGTCTATGTAACTTGGCCGATGATTGGCCTGCCTGCCCTCGTTGCAGTGTTTCCATTTCTGGTTGGCTGTATCGTTCAGTTGGCATTTGAAACCCATGTTGATAGGCGTGGCTCAGCTGCTTGGCCACTCGTTCCAATCATTTTTGAGGTTTATAGACTTTACCAGTTGACAAAAGCTTCCCATTGTATGGAGAGGTTGATGTTCCAAATGAGAGGGCTTCCCAACACTCCAGAATTGTTGGAAAAAAGTGGAGCTATTTTTTCTATGATGATAACCTTTCAAGTCCTGGGAGTGATATGCCTCTGGTCGCTAATGACTTTTCTTTTGAGGCTTTTTCCTTCCAGACCTGTGGCAGAGAATTACTAG MQSQSFSRGLPPALVGLQDGRSRFRRMQLGNRWKQGEQLEFSSKQLQFASKWDVLKRKRGAFMCVADSNGKPQLESSVKENRVLYVSALNGVEPCRGKSGSVSFHGLTHQLVEEGKLMSAPFREDKGSLLWVLAPAVFISSLIFPQVFLGDLIEAYFKEEILVEVVTSLVFEVLFYVGVAAFLLVTDRVQKPYLQFSSKRWSLITGLRGYLTTAFFIAGFKVVAPLFAVYVTWPMIGLPALVAVFPFLVGCIVQLAFETHVDRRGSAAWPLVPIIFEVYRLYQLTKASHCMERLMFQMRGLPNTPELLEKSGAIFSMMITFQVLGVICLWSLMTFLLRLFPSRPVAENY
BLAST of Carg08744 vs. NCBI nr
Match: XP_022936310.1 (uncharacterized protein LOC111442966 [Cucurbita moschata]) HSP 1 Score: 679.9 bits (1753), Expect = 4.7e-192 Identity = 346/349 (99.14%), Postives = 348/349 (99.71%), Query Frame = 0
BLAST of Carg08744 vs. NCBI nr
Match: XP_022974903.1 (uncharacterized protein LOC111473667 [Cucurbita maxima]) HSP 1 Score: 674.1 bits (1738), Expect = 2.6e-190 Identity = 344/349 (98.57%), Postives = 346/349 (99.14%), Query Frame = 0
BLAST of Carg08744 vs. NCBI nr
Match: XP_023535420.1 (uncharacterized protein LOC111796863 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 673.3 bits (1736), Expect = 4.4e-190 Identity = 343/349 (98.28%), Postives = 345/349 (98.85%), Query Frame = 0
BLAST of Carg08744 vs. NCBI nr
Match: XP_022138611.1 (uncharacterized protein LOC111009450 [Momordica charantia]) HSP 1 Score: 560.1 bits (1442), Expect = 5.4e-156 Identity = 289/351 (82.34%), Postives = 316/351 (90.03%), Query Frame = 0
BLAST of Carg08744 vs. NCBI nr
Match: XP_008466634.1 (PREDICTED: uncharacterized protein LOC103503989 [Cucumis melo]) HSP 1 Score: 553.1 bits (1424), Expect = 6.6e-154 Identity = 286/349 (81.95%), Postives = 310/349 (88.83%), Query Frame = 0
BLAST of Carg08744 vs. TAIR10
Match: AT1G48460.1 (unknown protein) HSP 1 Score: 345.1 bits (884), Expect = 5.0e-95 Identity = 173/284 (60.92%), Postives = 215/284 (75.70%), Query Frame = 0
BLAST of Carg08744 vs. TAIR10
Match: AT5G63040.1 (unknown protein) HSP 1 Score: 95.5 bits (236), Expect = 6.8e-20 Identity = 69/243 (28.40%), Postives = 114/243 (46.91%), Query Frame = 0
BLAST of Carg08744 vs. TrEMBL
Match: tr|A0A1S3CRR4|A0A1S3CRR4_CUCME (uncharacterized protein LOC103503989 OS=Cucumis melo OX=3656 GN=LOC103503989 PE=4 SV=1) HSP 1 Score: 553.1 bits (1424), Expect = 4.4e-154 Identity = 286/349 (81.95%), Postives = 310/349 (88.83%), Query Frame = 0
BLAST of Carg08744 vs. TrEMBL
Match: tr|A0A0A0LD62|A0A0A0LD62_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G854210 PE=4 SV=1) HSP 1 Score: 503.8 bits (1296), Expect = 3.0e-139 Identity = 264/349 (75.64%), Postives = 287/349 (82.23%), Query Frame = 0
BLAST of Carg08744 vs. TrEMBL
Match: tr|A0A2N9FQF7|A0A2N9FQF7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20838 PE=4 SV=1) HSP 1 Score: 421.8 bits (1083), Expect = 1.5e-114 Identity = 211/298 (70.81%), Postives = 246/298 (82.55%), Query Frame = 0
BLAST of Carg08744 vs. TrEMBL
Match: tr|W9SHM6|W9SHM6_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_021250 PE=4 SV=1) HSP 1 Score: 421.0 bits (1081), Expect = 2.6e-114 Identity = 213/337 (63.20%), Postives = 265/337 (78.64%), Query Frame = 0
BLAST of Carg08744 vs. TrEMBL
Match: tr|A0A2P4MY43|A0A2P4MY43_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_49771 PE=4 SV=1) HSP 1 Score: 419.9 bits (1078), Expect = 5.8e-114 Identity = 226/361 (62.60%), Postives = 270/361 (74.79%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|