Cp4.1LG02g07180 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG02g07180
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG02 : 747792 .. 753928 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATATTGGCCACCTGGAACCGGGTCCCCACCTCGTCGTTTTCTAACTCCCTTGCGAAGACTCGCGTGTGTCCGAAGCATTTTGGCGGGATTAGGGGAGTTTGAGGACAAGTTGCTCTGCTCTAAAGCCCTAAAAATATGGAGTCGCAATCCTTCTGTCGTAGGGCTTCCCCCTCGACATTGATCGCTTTCATCAACTGGTTAGTGCTTGTTTCGAATATTAATTTTATGATCGTCCTGTCATTTGGAAGTAACGTTATAGATTTGCTCTTCATTTCTTCTCAACCAATTAGGAAACCGAGTTCGAGAGAGGAGGCAAGGAGTACGGCTTCAATTTTCGCCGAAATGTATGTTTTTAGTTTGGTGCCATTTTTATTCTTGTCTATGTGCGTGTGTATATGATTTGTTGTTTGTGGATCAGTTTGATAAGAGTTAGTATTGGTTGTGAGATTTTTGCTATAATATTTGGTTGGGGATGTGTGCAAGAGGAAGAGAGGGGCGTTGATGTGCGTGGCTGATTCTAACACGAAGGCTGAATTAGAATCATCTAGAGAGTAAAATCATTTAGTGTATGTTAGTAGATTGAATGGAGTAGAGGCATTTCGTGGGAAATCTGGCTCAATCTCATTTCATGGTTTAACTCACCTGTTGGTAGAAGAGGGTAAATTAATGTTAGCTTCTTTTGGTGAAAACAAAGGGATCTCTCCTCTGGGTACTGGCTCCTGCGGCGTTTATATCATCTTTGATTCTTTCTCAAGTTTTTCTTGGTGGTCTGATTGAGGGTTTCTTCAAGAATGAGATTCTCGTAGGTATTTATTGAACTCATTCATGGGAAGCTGAGTTTATATTGTTATCTAAACCACTAATGTAATACGTTGACATTGTTCAAGTAGAAGTTGTGGCTTCATTGGTGTTTGAAGTCCTATTTTACGTTGGAGTTGCCATGTTCCTTCTCGTTACCAGCGGTGTTTAAATACCATACTTGCAATTCAGCTCAAAGAGGTGGAGCTTCATTACTGGGGTTAGAGGATACTTGACAACAACTTTTGTTATAGCTCTTAGGAATTACGACTTTCCACCAAGGCATGATATTGTCCACTTTGAGCATAAGTTCTCATGGTTTTGCTTTTAGTTTTCTCAAAAAGCTTCATACTAATGGCGGTAGTGTTCTCTTTCTTATGAACCTATCCTCATCCTCTAAATTAGTCAATGTGTGACTCCCTCCCAACAATCCTCAATAATAGCTCAATTATTTGCCGTGTGTGTAACTTGGTCGATGATTGGTCTGCCTCCGCTTGTTGCAGTTGTTAAGGATATTTAGTACTGAATTATCGTTTACCATTTATATCATATTATAGGTAAATATCCTTCCATGACGAGTATCTTACCCTTTATTACTGTTTCCATATCTTTGTAATTTATTTGATTATAAATAGAGAACTTTCACACCATTGGTTTTAGCAAATATTTTCACACCATTGGTACCAGAGCCTTTTCGGTTTAGCAACCTCGATCCTCTATTTTTAATGGCTTTTGAATCCTTTACTCATCTTCTTCTCCACCATCACTACCGGCTTTGACGCAGCACGGGTAGTCTCCATGACTGCCATAGGCGGAGTCGATTGATTACTCTTCAACTCCACCCTTTTGACCTCAAATCACTCTTCGCCATACTCTGTACATACAACCTCACATTCTCCAACACGATCGTTTTCTCCTTAGCCAACATAGTCTCTCATTTTCTTCCCAATCAGCCCTTCATCCTTCATAGAAACTCTAATCTCAGAATCCTCATACGTGCTCTCATCGAAAATATATAGAATCTTGAGAGTCTATTGACCTTCTGTAAAGATTTACCCTTGGAATCTGGGAGCCGCACTGGCCTCTTCGTCAACCAAGTCGCCGCCAGCCTCCTCGCCAAAATCGGCTCCTTCACCAACTGTGGCGACTCGGCCGGTTTCAACACCATCTTTGGTCTCCACTCCGGGAGGCGTGGCTCCCTCTTTGTCCATTGGACTTCACCACTTGCTATTGTTCCAGCTTCGCCTAGTGCTCCTTCGCCGGCCTTCACTCCTGGGAATGGTGGTGCTGTGAATAGAATCGCTGTCCATGAATCTATCATTGTGACTCTTCACCCACTTCTGATGGTCTCTTTATTGGTAAGTTAAAATATGCTCGAGATATTCTTACTCGTATTCATTTACTCGATAGCAAACCAGTCCACTGGATGCAAACCCCACTCCATCTCCGCCCCTCTCTTTCTTCGTCTAAAATACATATAAAGTCCACATTCTTAGTTTATGTCACCTTCTTCCTCTCTTGTTCCTCTCATCTTTATAGTCACCATCAAACTCTCTCTCTCTATTCTCTTTCTTCCTTTGGGTTCCCCCTTCTCCTTCGTGGGCTAGATATATTCTCGTTGGAGCCAAGACAACATCGTCGTTGAGCGACGATCCCTTGCAGTTTTCGATAGCCAAGAAAATGTTTCTCTATGTCTTCTTCGAGCCAGGTTGCTGACATCTTCACAAAAAGTGTTTCTCGATCTCTCTTTGAATTTTTCAGATCCAAGTTTCACGTTCGTTCAAATCCGACGCTCGGCTCGCGGGGGGTGTTAAGGATATTTAGTAATTATAGTTTACCATATATATCATATTTGATCTTTTATTATAGGCAAATAGGGTGGCTCATCTTGTTGCCCACTTGTTCCAATTATTTTGTAGGTATTTCACCTATAGTTATAACTTATAACTCATTCCTCGTTCCTTTCAAAGAGTAAATTAGATATTTTACAAACTTAATCATCTTGCAGGTTTATAGGATTTACCACTTGACAAAAGCTGCGCATTTTATAGAGAGGCTGATGTTCCAAATGAGAGGGCTTCCCACCACTCCAGACTTAAGTCCTATGGGTGGTATGTCTCTCGTCGTTTATGACTTTTCTTTTGAGGCTTTTTCCTTCCAGAACTGTAGTAGAGAAGTACTAGTGTTGTGACATGCTGTAAATTCTACTTTTAGGATTGGTCAACTCCTAATTACCGTTTATTTTGTTGCAACTAGTTCTAGTCTCTAGAACATTCGATCTAGAACATTGGAGAAGGGAATGTTACGAATTTGTAAGATTCCACATCAATTGGAGAGGGGAACGAGTGCCAATAAAAACGTTAGACCCCGAAAGGGGATGGATTGTGAGATTCACATCGGTTGGGGAAGAGAATGAACCATTTTTTTTATGAGGGTGCGGAAAGTTCTCCATAGTAGATTCCTCTTAAAAACCTATAGAAAAACCTAAAAGGGAAAACCTAAAGAGGACAATATCTGCTAGCGGTGGACTTGAGCTGTTATAATTGGTAGCAGAGCCAGACACCGGGCTATGTGCCAGCAAAGAGGCTGAGCCCTGAAGGGGGTGGACACGAGGTTGTGTGTCAGCACGGACGCTAGGCCTCAAAAGGGGTGGATTGGGAGGTCCCACATCAATTATAGAAGGGAAAGAGTGCCAACAAACACGTTGGGCCGAAGGGGGTGGATTGTGAGGTCCCCCATCGGTTGGGGAGGAGAACAAAACATTTTTTATAAAAGTGTGGAAACGTCTGCCTAATAGATGTGTTTTAAAAACCTCAAGGAGAACTACAAAAGGTGAAGCCAGACAATATCTACTAATGGTGGGCTAGGACTCAGACTTCGACTTCGGCTATTCTTTATATTTTTTAGTTTATTAATCCTCATCTTCATTGAATTCTTACATCTACTCATTGGTTAGCGGTCAATATTTTACTCATATAACCATCACAAATCCCAAGGTTCTTAATCCTAAGATGTGAGACGAGGTATATGCACTCAATGGGAGAGAAAAGTATTCTGTGTTTTCTATATTTTATTGATGTATAGTGTACAGTATTTATACGCACTTGATACCCCACAAATTAGGTTTTGAAGAGGAGAGTTTAGGTGGAGGCCCAAATTCACATGGTTGACCTCATAAAGAGCACGTGTCTAGTTTCACAAAAGTGCGCGATTGGGCAGCACTTGTTATAATCTAGCGAATAAGTCATGGAGAATAAAGAAAAGTTTATTGGGCCAAGGTCAGCCCAATAGTTGTGGGCTGACTTGGGGCTTTTCGGAAAAAGGTGGGGCTGAACCATGGAGAATAAAGAATAGTCTATTGGGCCGAAGTCAGCCCAATAGGTATGGGCTGACTTGGGCCTTATTCAGAAAAAGGTGTGGCTGAAACATGGAGAACAAGGAAGTCTGTTGGGCCGAAGTCAGCCCAATAGGTGTGGGCTGACTTGGGCCTTTTCAGAAAAAGGTGTGGCTGAAACATGGAGAATAAAGAATAGTCTATTGGGCCGAAGTCAGCCCAATAGGTATGGGCTGACTTGGGCCTTATTCAGAAAAAGGTGTGGCTGAAACATGGAGAACAAGGAAGTCTGTTGGGCCGAAGTCAGCCCAATAGGTGTGGGCTGACTTGGGCCTTTTCAGAAAAAGGTGTGGCTGAAACATAGAGAATAAAGAATAGTCTATTGGGCCGAAGTCAGCCCAATAGGTATGGGCTGACTTGGGCCTTTTCAGAAAAAGGTGTGGCTGAAACATGGAGAATAAAGAATAGTCTATTGGGCCGAAGTCAGCCCAATAGGTGTGGGCTGACTTGGGCCTTTTCAGAAAAAGGTGTGGCTGAAACATGGAGAATAAAGAATAGTCTATTGGGCCGAAGTCAGCCCAATAGGTGTGGGCTGACTTGGGCCTTTCAGAAAAAAGTGTGGCTGAAACATGGAGAATAAATAATAGTCTATTGGGCCGAAGTCAGCCCAATAGGTGTGGGCTGACTTGGGCCTTTCAGAAAAAGGAGTGGCTGAAACATGGAGAATAAAGAATAGTCTATTGGGCCGAAGTCAGCCCAATAGGTGTGGGCTGACTTGGGCCTTTTCAGAAAAAGGTGTGGCTGAAACATAGAGAATAAAGAATACTCTATTGGGCCGAACTCAGGGCACTAAGAAGGGGCAATCGTCTTTGAATGAATGAGGCGTGAATTGGGACGATAAGCCCTAGCCTCACTCTGCCTATAAGTAGACTGCGACCAAAACTAGAAACTCACCTTCCGCGCTTTCTTTACTTGAACTTCGCCGCCCGTATTTGTTCTTCGTATTTCTGATTCTTGATGGCTTAGGGTTTTCTTCTCTCGATTGAATTTTTCTTAGTACTTTGTCGTTGATTAGCAATGTGGAGGTTTTTGTTTCTCTGTGATGATGAACAATGATGACGAGTCCGATTCTAATCCATTCACCCGTGACGACAAAACGAGGCATTTGTCTGAGAGAAATCAAACCTCCATTCTTTTCTTTTATCAAATGGTTTACATTTTTTTATCTTTCTCTTTACGATTATGAGGCTTTATTGAATCTTTTGTTGATGGAATTCCTTCTATTTGATCGAAACTGGTTGTTAGATTTAAGCACAAGTGCGGCGATGATGAGAATACAGACTCTGGTTTAATTGAAACTGAGATTGTTTCTGTGAGTATTTCTCAAGCACTTTTGAGCCGTTTGTGGGAATACTTGGATGAATCTATTTCCTGAGTGTTTCTTTCAAATGCAATAAACCAGCCCATGACATTCTTGTCTGTCTCCGATAAAAACTTTCTATGCATTTTATAAGACGAGCATCCAAAATCCTTCTGTTTGGAGTTATTTTTCGTACGAAGTTATTTTAAATCAAAAGTGGAGTAGTGGAGTTTGAATATTTAACCATCTAGTCATGTGCAGGTTCGTTCTTTATCAAGTTTCAAGTACCTTGATTTGGTGATGTTACTTGGAAACAGAGCGTGTACACAGTTCTTCTGCCTGTTCCCAACTGCTGAACCTTTATTTGTTAATAAAGCTTGTCGTGGCTATGCCCATCCAACTCACAATGTGTATGTATAATAAATTTAGTATTGTTTATGAGAGGAATTCAATTTAACCCTATATTTATTCCATCTATTCCTTTCTTAGTACCATTCCATGTCAACTTGTTTTTTCTTCTCTTTTCAAATTCATTATACAATTATGTTAGGAACCCTCGTCTTTTCAACGTCTGACAAACCTTCTTGTTAAGGGGGTATCCACACTAAATTGTAATGTATAACGTGCTTCCCAAGAGATCCCA

mRNA sequence

AAATATTGGCCACCTGGAACCGGGTCCCCACCTCGTCGTTTTCTAACTCCCTTGCGAAGACTCGCGTGTGTCCGAAGCATTTTGGCGGGATTAGGGGAGTTTGAGGACAAGTTGCTCTGCTCTAAAGCCCTAAAAATATGGAGTCGCAATCCTTCTGTCGAAACCGAGTTCGAGAGAGGAGGCAAGGAGTACGGCTTCAATTTTCGCCGAAATGTTTATAGGATTTACCACTTGACAAAAGCTGCGCATTTTATAGAGAGGCTGATGTTCCAAATGAGAGGGCTTCCCACCACTCCAGACTTAAGTCCTATGGGTGGTTCGTTCTTTATCAAGTTTCAAGTACCTTGATTTGGTGATGTTACTTGGAAACAGAGCGTGTACACAGTTCTTCTGCCTGTTCCCAACTGCTGAACCTTTATTTGTTAATAAAGCTTGTCGTGGCTATGCCCATCCAACTCACAATGTGTATGTATAATAAATTTAGTATTGTTTATGAGAGGAATTCAATTTAACCCTATATTTATTCCATCTATTCCTTTCTTAGTACCATTCCATGTCAACTTGTTTTTTCTTCTCTTTTCAAATTCATTATACAATTATGTTAGGAACCCTCGTCTTTTCAACGTCTGACAAACCTTCTTGTTAAGGGGGTATCCACACTAAATTGTAATGTATAACGTGCTTCCCAAGAGATCCCA

Coding sequence (CDS)

AAATATTGGCCACCTGGAACCGGGTCCCCACCTCGTCGTTTTCTAACTCCCTTGCGAAGACTCGCGTGTGTCCGAAGCATTTTGGCGGGATTAGGGGAGTTTGAGGACAAGTTGCTCTGCTCTAAAGCCCTAAAAATATGGAGTCGCAATCCTTCTGTCGAAACCGAGTTCGAGAGAGGAGGCAAGGAGTACGGCTTCAATTTTCGCCGAAATGTTTATAGGATTTACCACTTGACAAAAGCTGCGCATTTTATAGAGAGGCTGATGTTCCAAATGAGAGGGCTTCCCACCACTCCAGACTTAAGTCCTATGGGTGGTTCGTTCTTTATCAAGTTTCAAGTACCTTGA

Protein sequence

KYWPPGTGSPPRRFLTPLRRLACVRSILAGLGEFEDKLLCSKALKIWSRNPSVETEFERGGKEYGFNFRRNVYRIYHLTKAAHFIERLMFQMRGLPTTPDLSPMGGSFFIKFQVP
BLAST of Cp4.1LG02g07180 vs. NCBI nr
Match: gi|659133256|ref|XP_008466634.1| (PREDICTED: uncharacterized protein LOC103503989 [Cucumis melo])

HSP 1 Score: 60.8 bits (146), Expect = 1.7e-06
Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = 1

Query: 72  VYRIYHLTKAAHFIERLMFQMRGLPTTPDLSPMGGSFF---IKFQV 115
           VYR+Y LTKAAHF+E LMFQMRGLPT+P+L    G+ F   I FQ+
Sbjct: 274 VYRLYQLTKAAHFMESLMFQMRGLPTSPELLEKSGALFAMMITFQI 319

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|659133256|ref|XP_008466634.1|1.7e-0663.04PREDICTED: uncharacterized protein LOC103503989 [Cucumis melo][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g07180.1Cp4.1LG02g07180.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG02g07180Lsi04G016320Bottle gourd (USVL1VR-Ls)cpelsiB462
Cp4.1LG02g07180Bhi11G002146Wax gourdcpewgoB0669
Cp4.1LG02g07180Carg08744Silver-seed gourdcarcpeB0153
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG02g07180Melon (DHL92) v3.6.1cpemedB605
Cp4.1LG02g07180Melon (DHL92) v3.6.1cpemedB637
Cp4.1LG02g07180Melon (DHL92) v3.6.1cpemedB648
Cp4.1LG02g07180Silver-seed gourdcarcpeB0265
Cp4.1LG02g07180Cucumber (Chinese Long) v3cpecucB0675
Cp4.1LG02g07180Cucumber (Chinese Long) v3cpecucB0693
Cp4.1LG02g07180Cucumber (Chinese Long) v3cpecucB0714
Cp4.1LG02g07180Wax gourdcpewgoB0684
Cp4.1LG02g07180Cucurbita pepo (Zucchini)cpecpeB090
Cp4.1LG02g07180Cucurbita pepo (Zucchini)cpecpeB125
Cp4.1LG02g07180Cucurbita pepo (Zucchini)cpecpeB264
Cp4.1LG02g07180Cucurbita pepo (Zucchini)cpecpeB414
Cp4.1LG02g07180Cucurbita pepo (Zucchini)cpecpeB459
Cp4.1LG02g07180Cucurbita pepo (Zucchini)cpecpeB471
Cp4.1LG02g07180Cucumber (Gy14) v1cgycpeB0612
Cp4.1LG02g07180Cucumber (Gy14) v1cgycpeB0885
Cp4.1LG02g07180Cucurbita maxima (Rimu)cmacpeB045
Cp4.1LG02g07180Cucurbita maxima (Rimu)cmacpeB190
Cp4.1LG02g07180Cucurbita maxima (Rimu)cmacpeB490
Cp4.1LG02g07180Cucurbita maxima (Rimu)cmacpeB679
Cp4.1LG02g07180Cucurbita maxima (Rimu)cmacpeB780
Cp4.1LG02g07180Cucurbita moschata (Rifu)cmocpeB020
Cp4.1LG02g07180Cucurbita moschata (Rifu)cmocpeB166
Cp4.1LG02g07180Cucurbita moschata (Rifu)cmocpeB450
Cp4.1LG02g07180Cucurbita moschata (Rifu)cmocpeB734
Cp4.1LG02g07180Cucurbita moschata (Rifu)cmocpeB820
Cp4.1LG02g07180Wild cucumber (PI 183967)cpecpiB541
Cp4.1LG02g07180Wild cucumber (PI 183967)cpecpiB558
Cp4.1LG02g07180Cucumber (Chinese Long) v2cpecuB539
Cp4.1LG02g07180Cucumber (Chinese Long) v2cpecuB556
Cp4.1LG02g07180Bottle gourd (USVL1VR-Ls)cpelsiB477
Cp4.1LG02g07180Watermelon (Charleston Gray)cpewcgB509
Cp4.1LG02g07180Watermelon (Charleston Gray)cpewcgB528
Cp4.1LG02g07180Watermelon (97103) v1cpewmB541
Cp4.1LG02g07180Watermelon (97103) v1cpewmB559
Cp4.1LG02g07180Melon (DHL92) v3.5.1cpemeB508
Cp4.1LG02g07180Cucumber (Gy14) v2cgybcpeB224
Cp4.1LG02g07180Cucumber (Gy14) v2cgybcpeB387