CmoCh09G001750 (gene) Cucurbita moschata (Rifu)

NameCmoCh09G001750
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionTRNA-processing ribonuclease BN
LocationCmo_Chr09 : 784763 .. 786524 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCCAACTTCCTCGCGAAGACGCCTATGCCCGAAGCATTTTCGCGGGCTTAGGGTTTAAGGACCGCTTGCTCTGCTCTAAAACCCTAAGAATATGCAGTCGCAATCCTTCTCTCGTGGGCTTCCCCCGGCTCTGGTCGGATTACAGGATGGCCGTTCTCGCTTTCGTCAAATGGTGAGTACTTGCTACCAATGTTTAATCAATGATTTTTCAGTCATTCGGAAGTAACATTGTAGTTTCGCTCTTCATTTCTTCTCAAGCAATTGGGAAACCGGTGGAAACAAGGAGAACAGCTTGAATTTTCATCCAAACAGCTTCAATTTGCATCCAAGTGTATGTTTTCTTTTATTCTTGCGTCTGTGTGTGTATTTTTTTTTTTTTCCTGGATCAGCCTGGTAAGAGTTAATACTGAGTGAGAGATTTCTGCTAAAACAATTTTGCAGGGGATGTGTTGAAGAGGAAGAGAGGGGCGTTCATGTGCGTGGCTGATTCTAACGGGAAGCCTCAGTTGGAATCATCTGGAAAGGAAAATCGTGTATTGTATGTTAGTGCATTGAATGGAGTGGAGCCTTGTCGTGGGAAATCTGGCTCTGTCTCATTTCATGGTCTCACTCACCAGCTGGTAGAAGAGGGTAAATTGATGTCAGCTCCTTTTAGAGAAGACAAGGGCTCTCTCCTCTGGGTACTAGCTCCTGCAGTGTTTATCTCATCTTTGATTTTTCCTCAAGTTTTCCTTGGCGATCTAATTGAGGCTTACTTCAAGGAGGAGATTCTCGTAGGTAGTATTGAACCGAGTTCATTTTATATTATGATTACTGGGGTTTCCTTTTGTCTGCTGTTTGTTTCATTCCATTGTGTGCGGCATATTGTTATCTAACGCAATACATTTGCATGGTTCAAGCAGAAGTTGTGACTTCATTGGTGTTTGAAGTCCTATTTTATGTCGGAGTTGCTGCGTTCCTGCTCGTGACCGATCGTGTTCAAAAACCATACTTGCAATTCAGCTCGAAGAGGTGGAGTCTCATTACAGGCCTTAGAGGATACTTGACAACAGCTTTCTTCATTTCTGGCTTCAAGGTTGTAGCTCCACTATTTGCCGTCTATGTAACTTGGCCGATGATTGGCCTGCCTGCCCTCGTTGCAGTGTTTCCATTTCTGGTTGGCTGTATCGTTCAGTTGGCATTTGAAACCCATGTTGATAGGCGTGGCTCAGCTGCTTGGCCACTCGTTCCAATCATTTTTGAGGTACTTCACGTATAGTTAGTTGTAAGTAACTCATTCCTCGTTGCTTTCAAAGAGTGAACAAGATCTTTTACAAAACGAATCAACTTGCAGGTTTATAGACTTTACCAGTTGACAAAAGCTTCCCATTGTATGGAGAGGTTGATGTTCCAAATGAGAGGGCTTCCCAACACTCCAGAATTGTTGGAAAAAAGTGGAGCTATTTTTTCTATGATGATAACCTTTCAAGTCCTGGGAGTGATATGCCTCTGGTCGCTAATGACTTTTCTTTTGAGGCTTTTTCCTTCCAGACCTGTGGCAGAGAATTACTAGTGTTGTGTAGCATTCTGTACATTCTATTTTCAGGGTTAGTTAACTCTTAATTACAATTTATTTTGTTGCAAGGACGTCTACAACATTTTATCATGATTTGTTCAATGAGCTCCATATTGTCCTACCCCATCAATTGATATTCAAATCTTCAGCTTCCTCAGAAGTTTAAGGAAAAATCAAGACTTGCCATCCAGTTTGATTTGAGTTAA

mRNA sequence

TTCCAACTTCCTCGCGAAGACGCCTATGCCCGAAGCATTTTCGCGGGCTTAGGGTTTAAGGACCGCTTGCTCTGCTCTAAAACCCTAAGAATATGCAGTCGCAATCCTTCTCTCGTGGGCTTCCCCCGGCTCTGGTCGGATTACAGGATGGCCGTTCTCGCTTTCGTCAAATGCAATTGGGAAACCGGTGGAAACAAGGAGAACAGCTTGAATTTTCATCCAAACAGCTTCAATTTGCATCCAAGTGGGATGTGTTGAAGAGGAAGAGAGGGGCGTTCATGTGCGTGGCTGATTCTAACGGGAAGCCTCAGTTGGAATCATCTGGAAAGGAAAATCGTGTATTGTATGTTAGTGCATTGAATGGAGTGGAGCCTTGTCGTGGGAAATCTGGCTCTGTCTCATTTCATGGTCTCACTCACCAGCTGGTAGAAGAGGGTAAATTGATGTCAGCTCCTTTTAGAGAAGACAAGGGCTCTCTCCTCTGGGTACTAGCTCCTGCAGTGTTTATCTCATCTTTGATTTTTCCTCAAGTTTTCCTTGGCGATCTAATTGAGGCTTACTTCAAGGAGGAGATTCTCGTAGAAGTTGTGACTTCATTGGTGTTTGAAGTCCTATTTTATGTCGGAGTTGCTGCGTTCCTGCTCGTGACCGATCGTGTTCAAAAACCATACTTGCAATTCAGCTCGAAGAGGTGGAGTCTCATTACAGGCCTTAGAGGATACTTGACAACAGCTTTCTTCATTTCTGGCTTCAAGGTTGTAGCTCCACTATTTGCCGTCTATGTAACTTGGCCGATGATTGGCCTGCCTGCCCTCGTTGCAGTGTTTCCATTTCTGGTTGGCTGTATCGTTCAGTTGGCATTTGAAACCCATGTTGATAGGCGTGGCTCAGCTGCTTGGCCACTCGTTCCAATCATTTTTGAGGTTTATAGACTTTACCAGTTGACAAAAGCTTCCCATTGTATGGAGAGGTTGATGTTCCAAATGAGAGGGCTTCCCAACACTCCAGAATTGTTGGAAAAAAGTGGAGCTATTTTTTCTATGATGATAACCTTTCAAGTCCTGGGAGTGATATGCCTCTGGTCGCTAATGACTTTTCTTTTGAGGCTTTTTCCTTCCAGACCTGTGGCAGAGAATTACTAGTGTTGTGTAGCATTCTGTACATTCTATTTTCAGGGTTAGTTAACTCTTAATTACAATTTATTTTGTTGCAAGGACGTCTACAACATTTTATCATGATTTGTTCAATGAGCTCCATATTGTCCTACCCCATCAATTGATATTCAAATCTTCAGCTTCCTCAGAAGTTTAAGGAAAAATCAAGACTTGCCATCCAGTTTGATTTGAGTTAA

Coding sequence (CDS)

ATGCAGTCGCAATCCTTCTCTCGTGGGCTTCCCCCGGCTCTGGTCGGATTACAGGATGGCCGTTCTCGCTTTCGTCAAATGCAATTGGGAAACCGGTGGAAACAAGGAGAACAGCTTGAATTTTCATCCAAACAGCTTCAATTTGCATCCAAGTGGGATGTGTTGAAGAGGAAGAGAGGGGCGTTCATGTGCGTGGCTGATTCTAACGGGAAGCCTCAGTTGGAATCATCTGGAAAGGAAAATCGTGTATTGTATGTTAGTGCATTGAATGGAGTGGAGCCTTGTCGTGGGAAATCTGGCTCTGTCTCATTTCATGGTCTCACTCACCAGCTGGTAGAAGAGGGTAAATTGATGTCAGCTCCTTTTAGAGAAGACAAGGGCTCTCTCCTCTGGGTACTAGCTCCTGCAGTGTTTATCTCATCTTTGATTTTTCCTCAAGTTTTCCTTGGCGATCTAATTGAGGCTTACTTCAAGGAGGAGATTCTCGTAGAAGTTGTGACTTCATTGGTGTTTGAAGTCCTATTTTATGTCGGAGTTGCTGCGTTCCTGCTCGTGACCGATCGTGTTCAAAAACCATACTTGCAATTCAGCTCGAAGAGGTGGAGTCTCATTACAGGCCTTAGAGGATACTTGACAACAGCTTTCTTCATTTCTGGCTTCAAGGTTGTAGCTCCACTATTTGCCGTCTATGTAACTTGGCCGATGATTGGCCTGCCTGCCCTCGTTGCAGTGTTTCCATTTCTGGTTGGCTGTATCGTTCAGTTGGCATTTGAAACCCATGTTGATAGGCGTGGCTCAGCTGCTTGGCCACTCGTTCCAATCATTTTTGAGGTTTATAGACTTTACCAGTTGACAAAAGCTTCCCATTGTATGGAGAGGTTGATGTTCCAAATGAGAGGGCTTCCCAACACTCCAGAATTGTTGGAAAAAAGTGGAGCTATTTTTTCTATGATGATAACCTTTCAAGTCCTGGGAGTGATATGCCTCTGGTCGCTAATGACTTTTCTTTTGAGGCTTTTTCCTTCCAGACCTGTGGCAGAGAATTACTAG
BLAST of CmoCh09G001750 vs. TrEMBL
Match: A0A0A0LD62_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G854210 PE=4 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 2.5e-140
Identity = 264/349 (75.64%), Postives = 288/349 (82.52%), Query Frame = 1

Query: 1   MQSQSFSRGLPPALVGLQDGRSRFRQMQLGNRWKQGEQLEFSSKQLQFASKWDVLKRKRG 60
           M SQSFS  L   L+GLQD RSRF  MQLGN              LQF+SKW VLKRKR 
Sbjct: 1   MHSQSFSPALTSPLLGLQDARSRFHPMQLGNPVSP----RTPRVHLQFSSKWAVLKRKRW 60

Query: 61  AFMCVADSNGKPQLESSGKENRVLYVSALNGVEPCRGKSGSVSFHGLTHQLVEEGKLMSA 120
           AFMCVADSN  PQLE SG+EN  +Y S LNGVEP  GK GSVSFHGLTHQLVEE KLMSA
Sbjct: 61  AFMCVADSNKSPQLELSGEENHAMYASRLNGVEPFHGKCGSVSFHGLTHQLVEESKLMSA 120

Query: 121 PFREDKGSLLWVLAPAVFISSLIFPQVFLGDLIEAYFKEEILVEVVTSLVFEVLFYVGVA 180
           PFRE+KGS+LWVLAP  FISSLI PQVFLG LIEA+FK  ILV         VLFYVGVA
Sbjct: 121 PFREEKGSILWVLAPVAFISSLILPQVFLGGLIEAFFKNRILV---------VLFYVGVA 180

Query: 181 AFLLVTDRVQKPYLQFSSKRWSLITGLRGYLTTAFFISGFKVVAPLFAVYVTWPMIGLPA 240
            FLLVT+RVQ+PYLQFSSKRWSLITGLRGYL+T FFI+GFKV+APL AV+VTWPMIGL A
Sbjct: 181 TFLLVTERVQRPYLQFSSKRWSLITGLRGYLSTTFFIAGFKVIAPLLAVFVTWPMIGLAA 240

Query: 241 LVAVFPFLVGCIVQLAFETHVDRRGSAAWPLVPIIFEVYRLYQLTKASHCMERLMFQMRG 300
           LVAVFPFLVGCIVQLAFET +DR GSA+WPLVPIIFEVYRLYQLTKASH ME LMF+++G
Sbjct: 241 LVAVFPFLVGCIVQLAFETLLDRCGSASWPLVPIIFEVYRLYQLTKASHFMESLMFELKG 300

Query: 301 LPNTPELLEKSGAIFSMMITFQVLGVICLWSLMTFLLRLFPSRPVAENY 350
           LP TP+LLEKSGA+F+MM TFQ+LGV+CLWSL+TFLLRLFPSRPVAENY
Sbjct: 301 LPMTPDLLEKSGALFAMMTTFQILGVVCLWSLLTFLLRLFPSRPVAENY 336

BLAST of CmoCh09G001750 vs. TrEMBL
Match: W9SHM6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021250 PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 3.7e-115
Identity = 213/337 (63.20%), Postives = 266/337 (78.93%), Query Frame = 1

Query: 13  ALVGLQDGRSRFRQMQLGNRWKQGEQLEFSSKQLQFASKWDVLKRKRGAFMCVADSNGKP 72
           ++V   D R R ++++ G   K  ++LE +S+         +   KR   +C + S+   
Sbjct: 23  SIVSASDVRFRTQRLRFGTAPKCLKRLEKNSQ---------LPSLKRRVIICSSHSSSDS 82

Query: 73  QLESSGKENRVLYVSALNGVEPCRGKSGSVSFHGLTHQLVEEGKLMSAPFREDKGSLLWV 132
           +L+  G+EN  + V   +GVEP RGKSGSVSF+GLTHQ VEEGKL+SAPF EDKGS+LW+
Sbjct: 83  KLKHLGRENSGVPVVRFDGVEPFRGKSGSVSFYGLTHQSVEEGKLVSAPFNEDKGSVLWI 142

Query: 133 LAPAVFISSLIFPQVFLGDLIEAYFKEEILVEVVTSLVFEVLFYVGVAAFLLVTDRVQKP 192
           LAP   ISSLI PQ F G  IEA  KEE LVE+V+SLVFEVLFY+G+A FLL+TDRVQ+P
Sbjct: 143 LAPVALISSLILPQFFFGSAIEAILKEETLVEIVSSLVFEVLFYIGLATFLLITDRVQRP 202

Query: 193 YLQFSSKRWSLITGLRGYLTTAFFISGFKVVAPLFAVYVTWPMIGLPALVAVFPFLVGCI 252
           YLQFS+KRW LITGLRGYLT++FF  GFKV+APLFAVYVTWP++GLPALVAV PFL GC 
Sbjct: 203 YLQFSTKRWGLITGLRGYLTSSFFAMGFKVIAPLFAVYVTWPVVGLPALVAVAPFLFGCA 262

Query: 253 VQLAFETHVDRRGSAAWPLVPIIFEVYRLYQLTKASHCMERLMFQMRGLPNTPELLEKSG 312
            Q +FET++D+ GS+ WPLVPI+FEVYRLYQLTKA+H +ERLMF M+GLP TP+++E+SG
Sbjct: 263 AQFSFETYLDKCGSSCWPLVPIVFEVYRLYQLTKAAHFIERLMFSMKGLPVTPKVMERSG 322

Query: 313 AIFSMMITFQVLGVICLWSLMTFLLRLFPSRPVAENY 350
           A+F+M++TFQ LGV+CLWSLMTFLLRLFPSRPVAE Y
Sbjct: 323 AMFAMIVTFQALGVVCLWSLMTFLLRLFPSRPVAEKY 350

BLAST of CmoCh09G001750 vs. TrEMBL
Match: V4SKA5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001600mg PE=4 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 2.0e-113
Identity = 212/329 (64.44%), Postives = 260/329 (79.03%), Query Frame = 1

Query: 22  SRFRQMQLGNRWK-QGEQLEFSSKQLQFASKWDVLKRKRGAFMCVADSNGKPQLESSGKE 81
           SR + ++ GN +K  G        +++  S W     KRGA +C ++S    +L     E
Sbjct: 39  SRSQSIRFGNAYKFLGNTFPNLKHKIEGYSAWS---SKRGAILCASNSGSDTKLGFPSGE 98

Query: 82  NRVLYVSALNGVEPCRGKSGSVSFHGLTHQLVEEGKLMSAPFREDKGSLLWVLAPAVFIS 141
           N  L V+  NG EP RGKSGSVSF GLTHQLVEEGKLMSAPF+EDKGS LW+LAP V IS
Sbjct: 99  NSSLPVAIFNGPEPFRGKSGSVSFCGLTHQLVEEGKLMSAPFQEDKGSFLWILAPVVLIS 158

Query: 142 SLIFPQVFLGDLIEAYFKEEILVEVVTSLVFEVLFYVGVAAFLLVTDRVQKPYLQFSSKR 201
           SLI PQ+FLG++IE + K+ +L+E+V+SL FE +FYVG+A FL +TDRVQ+PYLQFS KR
Sbjct: 159 SLILPQMFLGNVIEDFIKDNLLMEIVSSLTFESMFYVGLAIFLRITDRVQRPYLQFSPKR 218

Query: 202 WSLITGLRGYLTTAFFISGFKVVAPLFAVYVTWPMIGLPALVAVFPFLVGCIVQLAFETH 261
           W LITGLRGYLT+AFF +G KVVAPLFAVYVTWP++ LPALVAV PFLVGC  QLAFET+
Sbjct: 219 WGLITGLRGYLTSAFFTTGLKVVAPLFAVYVTWPVLRLPALVAVLPFLVGCAAQLAFETN 278

Query: 262 VDRRGSAAWPLVPIIFEVYRLYQLTKASHCMERLMFQMRGLPNTPELLEKSGAIFSMMIT 321
           +D+RGS+ WPL+PIIFEVYRLYQL+KA++ +ERLMF M+ LP +PELLE+  A+ SM++ 
Sbjct: 279 LDKRGSSCWPLIPIIFEVYRLYQLSKAANFIERLMFSMKDLPRSPELLERGSAMVSMVVI 338

Query: 322 FQVLGVICLWSLMTFLLRLFPSRPVAENY 350
           FQVLGV+CLWSL+TFLLRLFPSRPVAENY
Sbjct: 339 FQVLGVVCLWSLLTFLLRLFPSRPVAENY 364

BLAST of CmoCh09G001750 vs. TrEMBL
Match: V4TES9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001600mg PE=4 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 2.7e-113
Identity = 212/328 (64.63%), Postives = 259/328 (78.96%), Query Frame = 1

Query: 22  SRFRQMQLGNRWKQGEQLEFSSKQLQFASKWDVLKRKRGAFMCVADSNGKPQLESSGKEN 81
           SR + ++ GN +K         K ++  S W     KRGA +C ++S    +L     EN
Sbjct: 39  SRSQSIRFGNAYKWNTFPNLKHK-IEGYSAWS---SKRGAILCASNSGSDTKLGFPSGEN 98

Query: 82  RVLYVSALNGVEPCRGKSGSVSFHGLTHQLVEEGKLMSAPFREDKGSLLWVLAPAVFISS 141
             L V+  NG EP RGKSGSVSF GLTHQLVEEGKLMSAPF+EDKGS LW+LAP V ISS
Sbjct: 99  SSLPVAIFNGPEPFRGKSGSVSFCGLTHQLVEEGKLMSAPFQEDKGSFLWILAPVVLISS 158

Query: 142 LIFPQVFLGDLIEAYFKEEILVEVVTSLVFEVLFYVGVAAFLLVTDRVQKPYLQFSSKRW 201
           LI PQ+FLG++IE + K+ +L+E+V+SL FE +FYVG+A FL +TDRVQ+PYLQFS KRW
Sbjct: 159 LILPQMFLGNVIEDFIKDNLLMEIVSSLTFESMFYVGLAIFLRITDRVQRPYLQFSPKRW 218

Query: 202 SLITGLRGYLTTAFFISGFKVVAPLFAVYVTWPMIGLPALVAVFPFLVGCIVQLAFETHV 261
            LITGLRGYLT+AFF +G KVVAPLFAVYVTWP++ LPALVAV PFLVGC  QLAFET++
Sbjct: 219 GLITGLRGYLTSAFFTTGLKVVAPLFAVYVTWPVLRLPALVAVLPFLVGCAAQLAFETNL 278

Query: 262 DRRGSAAWPLVPIIFEVYRLYQLTKASHCMERLMFQMRGLPNTPELLEKSGAIFSMMITF 321
           D+RGS+ WPL+PIIFEVYRLYQL+KA++ +ERLMF M+ LP +PELLE+  A+ SM++ F
Sbjct: 279 DKRGSSCWPLIPIIFEVYRLYQLSKAANFIERLMFSMKDLPRSPELLERGSAMVSMVVIF 338

Query: 322 QVLGVICLWSLMTFLLRLFPSRPVAENY 350
           QVLGV+CLWSL+TFLLRLFPSRPVAENY
Sbjct: 339 QVLGVVCLWSLLTFLLRLFPSRPVAENY 362

BLAST of CmoCh09G001750 vs. TrEMBL
Match: A0A067GXD9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017898mg PE=4 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 2.7e-113
Identity = 211/329 (64.13%), Postives = 260/329 (79.03%), Query Frame = 1

Query: 22  SRFRQMQLGNRWK-QGEQLEFSSKQLQFASKWDVLKRKRGAFMCVADSNGKPQLESSGKE 81
           SR + ++ GN +K  G        +++  S W     KRGA +C ++S    +L     E
Sbjct: 39  SRSQSIRFGNAYKFLGNTFPNLKHKIEGYSAWS---SKRGAILCASNSGSDTKLGFPSGE 98

Query: 82  NRVLYVSALNGVEPCRGKSGSVSFHGLTHQLVEEGKLMSAPFREDKGSLLWVLAPAVFIS 141
           N  L V+  NG EP RGKSGSVSF GLTHQLVEEGKLMSAPF+EDKGS LW+LAP V IS
Sbjct: 99  NSSLPVAIFNGPEPFRGKSGSVSFCGLTHQLVEEGKLMSAPFQEDKGSFLWILAPVVLIS 158

Query: 142 SLIFPQVFLGDLIEAYFKEEILVEVVTSLVFEVLFYVGVAAFLLVTDRVQKPYLQFSSKR 201
           SLI PQ+FLG++IE + K+ +L+E+V+SL FE +FYVG+A FL +TDRVQ+PYLQFS KR
Sbjct: 159 SLILPQMFLGNVIEDFIKDNLLMEIVSSLTFESMFYVGLAIFLRITDRVQRPYLQFSPKR 218

Query: 202 WSLITGLRGYLTTAFFISGFKVVAPLFAVYVTWPMIGLPALVAVFPFLVGCIVQLAFETH 261
           W LITGLRGYLT+AFF +G KVVAPLFAVYVTWP++ LPALVAV PFLVGC  QLAFET+
Sbjct: 219 WGLITGLRGYLTSAFFTTGLKVVAPLFAVYVTWPVLRLPALVAVLPFLVGCAAQLAFETN 278

Query: 262 VDRRGSAAWPLVPIIFEVYRLYQLTKASHCMERLMFQMRGLPNTPELLEKSGAIFSMMIT 321
           +D+RGS+ WPL+PIIFEVYRLYQL+KA++ +ERLMF M+ LP +PELLE+  A+ SM++ 
Sbjct: 279 LDKRGSSCWPLIPIIFEVYRLYQLSKAANFIERLMFSMKDLPRSPELLERGSAMVSMVVI 338

Query: 322 FQVLGVICLWSLMTFLLRLFPSRPVAENY 350
           FQ+LGV+CLWSL+TFLLRLFPSRPVAENY
Sbjct: 339 FQILGVVCLWSLLTFLLRLFPSRPVAENY 364

BLAST of CmoCh09G001750 vs. TAIR10
Match: AT1G48460.1 (AT1G48460.1 unknown protein)

HSP 1 Score: 345.5 bits (885), Expect = 3.8e-95
Identity = 173/284 (60.92%), Postives = 215/284 (75.70%), Query Frame = 1

Query: 66  ADSNGKPQLESSGKENRVLYVSALNGVEPCRGKSGSVSFHGLTHQLVEEGKLMSAPFRED 125
           + S+ +P+ + S K N   Y  A    E  RGKSGSVSF+GLTHQLVEE KL+SAPF+E+
Sbjct: 64  SQSDSRPEKKQSDKSN---YARA----ELFRGKSGSVSFNGLTHQLVEESKLVSAPFQEE 123

Query: 126 KGSLLWVLAPAVFISSLIFPQVFLGDLIEAYFKEEILVEVVTSLVFEVLFYVGVAAFLLV 185
           KGS LWVLAP V ISSLI PQ FL  +IEA FK + + E+VTS  FE +FY G+A FL V
Sbjct: 124 KGSFLWVLAPVVLISSLILPQFFLSGIIEATFKNDTVAEIVTSFCFETVFYAGLAIFLSV 183

Query: 186 TDRVQKPYLQFSSKRWSLITGLRGYLTTAFFISGFKVVAPLFAVYVTWPMIGLPALVAVF 245
           TDRVQ+PYL FSSKRW LITGLRGYLT+AF   G KVV P+FAVY+TWP +G+ AL+AV 
Sbjct: 184 TDRVQRPYLDFSSKRWGLITGLRGYLTSAFLTMGLKVVVPVFAVYMTWPALGIDALIAVL 243

Query: 246 PFLVGCIVQLAFETHVDRRGSAAWPLVPIIFEVYRLYQLTKASHCMERLMFQMRGLPNTP 305
           PFLVGC VQ  FE  ++RRGS+ WP+VPI+FEVYRLYQ+T+A+  ++RLMF M+    T 
Sbjct: 244 PFLVGCAVQRVFEARLERRGSSCWPIVPIVFEVYRLYQVTRAATFVQRLMFMMKDAATTA 303

Query: 306 ELLEKSGAIFSMMITFQVLGVICLWSLMTFLLRLFPSRPVAENY 350
           E+ E+  A+  +++T Q L V+CLWS +TFL+RLFPSRPV ENY
Sbjct: 304 EITERGVALVGLVVTLQFLAVMCLWSFITFLMRLFPSRPVGENY 340

BLAST of CmoCh09G001750 vs. TAIR10
Match: AT5G63040.1 (AT5G63040.1 unknown protein)

HSP 1 Score: 132.1 bits (331), Expect = 6.6e-31
Identity = 82/243 (33.74%), Postives = 133/243 (54.73%), Query Frame = 1

Query: 97  GKSGSVSFHGLTHQLVEEGKLMSAPFREDKGSLLWVLAPAVFISSLIFPQVFLGDLIEAY 156
           GK G +SF+   ++   E  ++    +   G LLW++ PAV +SS I P V+L  ++ A 
Sbjct: 120 GKPGFISFYNPRNKT--EDIIIPPETQSPWGRLLWLIGPAVLVSSFILPPVYLRRIVSAV 179

Query: 157 FKEEILVEVVTSLVFEVLFYVGVAAFLLVTDRVQKPYLQFSSKRWSLITGLRGYLTTAFF 216
           F++ +L + +     E LFY GVAAFLL+ DR +K   +    R  +     G   ++  
Sbjct: 180 FEDSLLTDFLILFFTEALFYCGVAAFLLIIDRSRKGSGKVPQNR--INPSQLGQRISSVA 239

Query: 217 ISGFKVVAPLFAVYVTWPMIGLPALVAVFPFLVGCIVQLAFETHVDRRGSAAWPLVPIIF 276
                ++ P+  +   WP  G  A   + P+LVG +VQ AFE +   R S + P++PIIF
Sbjct: 240 TLVLSLMIPMVTMGFVWPWTGPAASATLAPYLVGIVVQFAFEQYARYRNSPSSPIIPIIF 299

Query: 277 EVYRLYQLTKASHCMERLMFQMRGLPNTPELLEKSGAIFSMMITFQVLGVICLWSLMTFL 336
           +VYRL+QL +A+  +  L F ++G   T   L    ++ +++   QVLGVI +WS+ +FL
Sbjct: 300 QVYRLHQLNRAAQLVTALSFTVKGAEATVNNLAIKKSLGTLLNVIQVLGVISIWSISSFL 358

Query: 337 LRL 340
           + L
Sbjct: 360 MWL 358

BLAST of CmoCh09G001750 vs. NCBI nr
Match: gi|659133256|ref|XP_008466634.1| (PREDICTED: uncharacterized protein LOC103503989 [Cucumis melo])

HSP 1 Score: 556.6 bits (1433), Expect = 3.1e-155
Identity = 287/349 (82.23%), Postives = 311/349 (89.11%), Query Frame = 1

Query: 1   MQSQSFSRGLPPALVGLQDGRSRFRQMQLGNRWKQGEQLEFSSKQLQFASKWDVLKRKRG 60
           M SQSFSRGL   L+GLQD  SRF QMQLGN             QL+F+SK +VLKRKR 
Sbjct: 1   MPSQSFSRGLTSPLLGLQDAHSRFHQMQLGNPVSPRRP----RVQLEFSSKCNVLKRKRW 60

Query: 61  AFMCVADSNGKPQLESSGKENRVLYVSALNGVEPCRGKSGSVSFHGLTHQLVEEGKLMSA 120
           AFMCVA+SN  PQLESSG+EN VLYVS LNGVEP  GK GSVSFHGL+HQLVEEGKLMS+
Sbjct: 61  AFMCVANSNKSPQLESSGEENHVLYVSRLNGVEPFHGKCGSVSFHGLSHQLVEEGKLMSS 120

Query: 121 PFREDKGSLLWVLAPAVFISSLIFPQVFLGDLIEAYFKEEILVEVVTSLVFEVLFYVGVA 180
           PFRE+KGS+LWVLAPA FISSLI PQVFLG LIEA+FK  ILVE+V+SLVFEVLFYVGVA
Sbjct: 121 PFREEKGSILWVLAPAAFISSLILPQVFLGGLIEAFFKNGILVEIVSSLVFEVLFYVGVA 180

Query: 181 AFLLVTDRVQKPYLQFSSKRWSLITGLRGYLTTAFFISGFKVVAPLFAVYVTWPMIGLPA 240
            FLLVTDRVQ+PYLQFSSKRWSLITGLRGYL+TAFFI+GFKVVAPLFAVYVTWPMIGLPA
Sbjct: 181 TFLLVTDRVQRPYLQFSSKRWSLITGLRGYLSTAFFIAGFKVVAPLFAVYVTWPMIGLPA 240

Query: 241 LVAVFPFLVGCIVQLAFETHVDRRGSAAWPLVPIIFEVYRLYQLTKASHCMERLMFQMRG 300
           LVAVFPFLVGCIVQLAFETH+DRRGSA+WPLVPIIFEVYRLYQLTKA+H ME LMFQMRG
Sbjct: 241 LVAVFPFLVGCIVQLAFETHLDRRGSASWPLVPIIFEVYRLYQLTKAAHFMESLMFQMRG 300

Query: 301 LPNTPELLEKSGAIFSMMITFQVLGVICLWSLMTFLLRLFPSRPVAENY 350
           LP +PELLEKSGA+F+MMITFQ+LGV+CLWSLMTFLLRLFPSRPVAENY
Sbjct: 301 LPTSPELLEKSGALFAMMITFQILGVVCLWSLMTFLLRLFPSRPVAENY 345

BLAST of CmoCh09G001750 vs. NCBI nr
Match: gi|449460131|ref|XP_004147799.1| (PREDICTED: uncharacterized protein LOC101207359 [Cucumis sativus])

HSP 1 Score: 525.8 bits (1353), Expect = 5.8e-146
Identity = 271/349 (77.65%), Postives = 296/349 (84.81%), Query Frame = 1

Query: 1   MQSQSFSRGLPPALVGLQDGRSRFRQMQLGNRWKQGEQLEFSSKQLQFASKWDVLKRKRG 60
           M SQSFS  L   L+GLQD RSRF  MQLGN              LQF+SKW VLKRKR 
Sbjct: 1   MHSQSFSPALTSPLLGLQDARSRFHPMQLGNPVSP----RTPRVHLQFSSKWAVLKRKRW 60

Query: 61  AFMCVADSNGKPQLESSGKENRVLYVSALNGVEPCRGKSGSVSFHGLTHQLVEEGKLMSA 120
           AFMCVADSN  PQLE SG+EN  +Y S LNGVEP  GK GSVSFHGLTHQLVEE KLMSA
Sbjct: 61  AFMCVADSNKSPQLELSGEENHAMYASRLNGVEPFHGKCGSVSFHGLTHQLVEESKLMSA 120

Query: 121 PFREDKGSLLWVLAPAVFISSLIFPQVFLGDLIEAYFKEEILVEVVTSLVFEVLFYVGVA 180
           PFRE+KGS+LWVLAP  FISSLI PQVFLG LIEA+FK  ILVE V+SLVFEVLFYVGVA
Sbjct: 121 PFREEKGSILWVLAPVAFISSLILPQVFLGGLIEAFFKNRILVETVSSLVFEVLFYVGVA 180

Query: 181 AFLLVTDRVQKPYLQFSSKRWSLITGLRGYLTTAFFISGFKVVAPLFAVYVTWPMIGLPA 240
            FLLVT+RVQ+PYLQFSSKRWSLITGLRGYL+T FFI+GFKV+APL AV+VTWPMIGL A
Sbjct: 181 TFLLVTERVQRPYLQFSSKRWSLITGLRGYLSTTFFIAGFKVIAPLLAVFVTWPMIGLAA 240

Query: 241 LVAVFPFLVGCIVQLAFETHVDRRGSAAWPLVPIIFEVYRLYQLTKASHCMERLMFQMRG 300
           LVAVFPFLVGCIVQLAFET +DR GSA+WPLVPIIFEVYRLYQLTKASH ME LMF+++G
Sbjct: 241 LVAVFPFLVGCIVQLAFETLLDRCGSASWPLVPIIFEVYRLYQLTKASHFMESLMFELKG 300

Query: 301 LPNTPELLEKSGAIFSMMITFQVLGVICLWSLMTFLLRLFPSRPVAENY 350
           LP TP+LLEKSGA+F+MM TFQ+LGV+CLWSL+TFLLRLFPSRPVAENY
Sbjct: 301 LPMTPDLLEKSGALFAMMTTFQILGVVCLWSLLTFLLRLFPSRPVAENY 345

BLAST of CmoCh09G001750 vs. NCBI nr
Match: gi|700204792|gb|KGN59925.1| (hypothetical protein Csa_3G854210 [Cucumis sativus])

HSP 1 Score: 506.5 bits (1303), Expect = 3.6e-140
Identity = 264/349 (75.64%), Postives = 288/349 (82.52%), Query Frame = 1

Query: 1   MQSQSFSRGLPPALVGLQDGRSRFRQMQLGNRWKQGEQLEFSSKQLQFASKWDVLKRKRG 60
           M SQSFS  L   L+GLQD RSRF  MQLGN              LQF+SKW VLKRKR 
Sbjct: 1   MHSQSFSPALTSPLLGLQDARSRFHPMQLGNPVSP----RTPRVHLQFSSKWAVLKRKRW 60

Query: 61  AFMCVADSNGKPQLESSGKENRVLYVSALNGVEPCRGKSGSVSFHGLTHQLVEEGKLMSA 120
           AFMCVADSN  PQLE SG+EN  +Y S LNGVEP  GK GSVSFHGLTHQLVEE KLMSA
Sbjct: 61  AFMCVADSNKSPQLELSGEENHAMYASRLNGVEPFHGKCGSVSFHGLTHQLVEESKLMSA 120

Query: 121 PFREDKGSLLWVLAPAVFISSLIFPQVFLGDLIEAYFKEEILVEVVTSLVFEVLFYVGVA 180
           PFRE+KGS+LWVLAP  FISSLI PQVFLG LIEA+FK  ILV         VLFYVGVA
Sbjct: 121 PFREEKGSILWVLAPVAFISSLILPQVFLGGLIEAFFKNRILV---------VLFYVGVA 180

Query: 181 AFLLVTDRVQKPYLQFSSKRWSLITGLRGYLTTAFFISGFKVVAPLFAVYVTWPMIGLPA 240
            FLLVT+RVQ+PYLQFSSKRWSLITGLRGYL+T FFI+GFKV+APL AV+VTWPMIGL A
Sbjct: 181 TFLLVTERVQRPYLQFSSKRWSLITGLRGYLSTTFFIAGFKVIAPLLAVFVTWPMIGLAA 240

Query: 241 LVAVFPFLVGCIVQLAFETHVDRRGSAAWPLVPIIFEVYRLYQLTKASHCMERLMFQMRG 300
           LVAVFPFLVGCIVQLAFET +DR GSA+WPLVPIIFEVYRLYQLTKASH ME LMF+++G
Sbjct: 241 LVAVFPFLVGCIVQLAFETLLDRCGSASWPLVPIIFEVYRLYQLTKASHFMESLMFELKG 300

Query: 301 LPNTPELLEKSGAIFSMMITFQVLGVICLWSLMTFLLRLFPSRPVAENY 350
           LP TP+LLEKSGA+F+MM TFQ+LGV+CLWSL+TFLLRLFPSRPVAENY
Sbjct: 301 LPMTPDLLEKSGALFAMMTTFQILGVVCLWSLLTFLLRLFPSRPVAENY 336

BLAST of CmoCh09G001750 vs. NCBI nr
Match: gi|645227885|ref|XP_008220733.1| (PREDICTED: uncharacterized protein LOC103320790 [Prunus mume])

HSP 1 Score: 424.9 bits (1091), Expect = 1.4e-115
Identity = 217/360 (60.28%), Postives = 276/360 (76.67%), Query Frame = 1

Query: 1   MQSQSFSRGLPPALVGLQDGRSRFRQMQLGNRWKQGEQL-----EFSSKQL------QFA 60
           M+ QS  RG P + +GL   R    Q+ L +  +  +Q        +SK         F 
Sbjct: 1   MELQSVCRGFPTSNIGLSSHRIVPHQLVLASHARLRDQRLRKHNGIASKSYLMPGLKSFV 60

Query: 61  SKWDVLKRKRGAFMCVADSNGKPQLESSGKENRVLYVSALNGVEPCRGKSGSVSFHGLTH 120
            +  +L   RGA  C ++S+   +LE SG +N  +    ++GVEP RGKSGS+SFHGLTH
Sbjct: 61  KESSILSLNRGAIKCASNSSDA-KLEFSGGDNSNVPFRRVDGVEPFRGKSGSISFHGLTH 120

Query: 121 QLVEEGKLMSAPFREDKGSLLWVLAPAVFISSLIFPQVFLGDLIEAYFKEEILVEVVTSL 180
           QLVEEGKL+SAPF E+KGS LW  APA  ISSL+ PQ F+G+ IEA+ K+EI++E+VTSL
Sbjct: 121 QLVEEGKLVSAPFDEEKGSFLWFFAPAALISSLLLPQFFIGNAIEAFLKDEIIIEIVTSL 180

Query: 181 VFEVLFYVGVAAFLLVTDRVQKPYLQFSSKRWSLITGLRGYLTTAFFISGFKVVAPLFAV 240
            +E  FYVG+A FLLVTDRVQ+PYLQFS+KRW LITGLRGYL +AFF +GFKV+APLFAV
Sbjct: 181 SYEAAFYVGLAIFLLVTDRVQRPYLQFSTKRWGLITGLRGYLASAFFTTGFKVIAPLFAV 240

Query: 241 YVTWPMIGLPALVAVFPFLVGCIVQLAFETHVDRRGSAAWPLVPIIFEVYRLYQLTKASH 300
           YVTWP++GLPALV+V PFLVGC+ QLAFET ++++GS+ WPLVPIIFEVYRLYQLTKA++
Sbjct: 241 YVTWPLLGLPALVSVVPFLVGCVAQLAFETGLEKQGSSCWPLVPIIFEVYRLYQLTKAAY 300

Query: 301 CMERLMFQMRGLPNTPELLEKSGAIFSMMITFQVLGVICLWSLMTFLLRLFPSRPVAENY 350
            +E+LM+ M+G+P +PELLE+SGA+FSM++TFQV+GV+CLWSLM FLLRLFPSRPVAE Y
Sbjct: 301 FIEKLMYAMKGMPASPELLERSGALFSMIVTFQVVGVVCLWSLMAFLLRLFPSRPVAEKY 359

BLAST of CmoCh09G001750 vs. NCBI nr
Match: gi|703136131|ref|XP_010106072.1| (hypothetical protein L484_021250 [Morus notabilis])

HSP 1 Score: 422.9 bits (1086), Expect = 5.3e-115
Identity = 213/337 (63.20%), Postives = 266/337 (78.93%), Query Frame = 1

Query: 13  ALVGLQDGRSRFRQMQLGNRWKQGEQLEFSSKQLQFASKWDVLKRKRGAFMCVADSNGKP 72
           ++V   D R R ++++ G   K  ++LE +S+         +   KR   +C + S+   
Sbjct: 23  SIVSASDVRFRTQRLRFGTAPKCLKRLEKNSQ---------LPSLKRRVIICSSHSSSDS 82

Query: 73  QLESSGKENRVLYVSALNGVEPCRGKSGSVSFHGLTHQLVEEGKLMSAPFREDKGSLLWV 132
           +L+  G+EN  + V   +GVEP RGKSGSVSF+GLTHQ VEEGKL+SAPF EDKGS+LW+
Sbjct: 83  KLKHLGRENSGVPVVRFDGVEPFRGKSGSVSFYGLTHQSVEEGKLVSAPFNEDKGSVLWI 142

Query: 133 LAPAVFISSLIFPQVFLGDLIEAYFKEEILVEVVTSLVFEVLFYVGVAAFLLVTDRVQKP 192
           LAP   ISSLI PQ F G  IEA  KEE LVE+V+SLVFEVLFY+G+A FLL+TDRVQ+P
Sbjct: 143 LAPVALISSLILPQFFFGSAIEAILKEETLVEIVSSLVFEVLFYIGLATFLLITDRVQRP 202

Query: 193 YLQFSSKRWSLITGLRGYLTTAFFISGFKVVAPLFAVYVTWPMIGLPALVAVFPFLVGCI 252
           YLQFS+KRW LITGLRGYLT++FF  GFKV+APLFAVYVTWP++GLPALVAV PFL GC 
Sbjct: 203 YLQFSTKRWGLITGLRGYLTSSFFAMGFKVIAPLFAVYVTWPVVGLPALVAVAPFLFGCA 262

Query: 253 VQLAFETHVDRRGSAAWPLVPIIFEVYRLYQLTKASHCMERLMFQMRGLPNTPELLEKSG 312
            Q +FET++D+ GS+ WPLVPI+FEVYRLYQLTKA+H +ERLMF M+GLP TP+++E+SG
Sbjct: 263 AQFSFETYLDKCGSSCWPLVPIVFEVYRLYQLTKAAHFIERLMFSMKGLPVTPKVMERSG 322

Query: 313 AIFSMMITFQVLGVICLWSLMTFLLRLFPSRPVAENY 350
           A+F+M++TFQ LGV+CLWSLMTFLLRLFPSRPVAE Y
Sbjct: 323 AMFAMIVTFQALGVVCLWSLMTFLLRLFPSRPVAEKY 350

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LD62_CUCSA2.5e-14075.64Uncharacterized protein OS=Cucumis sativus GN=Csa_3G854210 PE=4 SV=1[more]
W9SHM6_9ROSA3.7e-11563.20Uncharacterized protein OS=Morus notabilis GN=L484_021250 PE=4 SV=1[more]
V4SKA5_9ROSI2.0e-11364.44Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001600mg PE=4 SV=1[more]
V4TES9_9ROSI2.7e-11364.63Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001600mg PE=4 SV=1[more]
A0A067GXD9_CITSI2.7e-11364.13Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017898mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G48460.13.8e-9560.92 unknown protein[more]
AT5G63040.16.6e-3133.74 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659133256|ref|XP_008466634.1|3.1e-15582.23PREDICTED: uncharacterized protein LOC103503989 [Cucumis melo][more]
gi|449460131|ref|XP_004147799.1|5.8e-14677.65PREDICTED: uncharacterized protein LOC101207359 [Cucumis sativus][more]
gi|700204792|gb|KGN59925.1|3.6e-14075.64hypothetical protein Csa_3G854210 [Cucumis sativus][more]
gi|645227885|ref|XP_008220733.1|1.4e-11560.28PREDICTED: uncharacterized protein LOC103320790 [Prunus mume][more]
gi|703136131|ref|XP_010106072.1|5.3e-11563.20hypothetical protein L484_021250 [Morus notabilis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh09G001750.1CmoCh09G001750.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33918FAMILY NOT NAMEDcoord: 25..349
score: 4.2E
NoneNo IPR availablePANTHERPTHR33918:SF1SUBFAMILY NOT NAMEDcoord: 25..349
score: 4.2E

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh09G001750CmoCh01G019450Cucurbita moschata (Rifu)cmocmoB017