CsaV3_6G010150 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_6G010150
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	GDSL esterase/lipase
Location	chr6 : 8262202 .. 8263502 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCTTCCTCTCTTTTCTTTCAATGCCCAACGGAGTTCTACTACTACTAATTCCCGTCGGAAGCCTACTAAATTCATCAAAACAACCACCCTCAATAATGCTTCCGCCACACCCCACAACATCACTCCCCCGTGTTCCGAATGCGGCAAGAAATTCTGTTCATGGAAGGCTCTTTTCGGCCACATGCGCTGCCATCCCGAGCGTCAATGGCGAGGAATCAACCCACCCCCTATTTTCCTCCATCCTCCCTCCGCCGCTCAACTAGATCATGAAATCGCTACCTCTTTGATCATGCTCTCAAATGCCCCACCGGACCCCGGACGTGGAACTTCAGAGGGCAGAGAAGCAGTGGTAGTTTGTGAGCACAAACCAAGGGCACATTCTGGATTATTGGACTTGAATTTGCCTCCTCCAATGGAGGAGATTGAACAGGAATCTTCATCTCCCTATTCATCAGGGATTGTTTTGGATCTCAGATTGGGGCTTAATTAATTCAACCATTTTTACATTTCTTTTCTTCTTATTTCCTCCAAATAGGGAAAAACAAGAGTTTGTGGTAAGTATTACACTAATTAATTAACTAGGAAGGACAAACGTGTGAAGTCAATTCAGCAATCTATAACTCAAACAATTATTATACATTCTGATTCTTTTCAATAAATTTTATGTATACTAATATCATTTCCATTCCTTATATAACTGGGGTTGGACACTAACATATATAATATAACATAAAGTGTATAGATTTTCTGTGGTTTATGTTTTCAGTTTTGTTTTTGTTTGTGGATTTCATAACAACGTAACCTCCTTTTGCCTACTATTTAGAAACTGTACGACCATGGGGCTAGGAATTTTTGGATACACAACACAGGTCCTCTAGGATGTTTGGCTCAGAATGTTGTTAAATTTGGACCTGACCCATCAAAGCTTGATGAGTTTGGATTCGTCAGTTCACACAACCAAGCAGCCAAGCTCTTCAATCTACAACTCCGTTGCTCATTGTTAAAATGTGATGGCAACGTACGTCACATACATTGATATGATCTACTCGATCAAATCAAATCTTATTGCCAATCATTCACGATTGGATCGACGCTAATCTTCTGTATAGATTTTGTCTCATTTTCTATTAATCTTGTCTAATCTGATGACTTGTTACATTTTGTGTGTATATATGGCAGGGTTTAAACAACCTATATCATGGCTTGCTGTGTCTATGGATGGAGGTCCACCTCTTAATTACTACAGTGGAATCATATGTGGAGAAACAAATACCTTGGACGGGACGTTTACACTAA

mRNA sequence

ATGGATCTTCCTCTCTTTTCTTTCAATGCCCAACGGAGTTCTACTACTACTAATTCCCGTCGGAAGCCTACTAAATTCATCAAAACAACCACCCTCAATAATGCTTCCGCCACACCCCACAACATCACTCCCCCGTGTTCCGAATGCGGCAAGAAATTCTGTTCATGGAAGGCTCTTTTCGGCCACATGCGCTGCCATCCCGAGCGTCAATGGCGAGGAATCAACCCACCCCCTATTTTCCTCCATCCTCCCTCCGCCGCTCAACTAGATCATGAAATCGCTACCTCTTTGATCATGCTCTCAAATGCCCCACCGGACCCCGGACGTGGAACTTCAGAGGGCAGAGAAGCAGTGGTAGTTTGTGAGCACAAACCAAGGGCACATTCTGGATTATTGGACTTGAATTTGCCTCCTCCAATGGAGGAGATTGAACAGGAATCTTCATCTCCCTATTCATCAGGGATTAAACTGTACGACCATGGGGCTAGGAATTTTTGGATACACAACACAGGTCCTCTAGGATGTTTGGCTCAGAATGTTGTTAAATTTGGACCTGACCCATCAAAGCTTGATGAGTTTGGATTCGTCAGTTCACACAACCAAGCAGCCAAGCTCTTCAATCTACAACTCCGTTGCTCATTGTTAAAATGTGATGGCAACGGTTTAAACAACCTATATCATGGCTTGCTGTGTCTATGGATGGAGGTCCACCTCTTAATTACTACAGTGGAATCATATGTGGAGAAACAAATACCTTGGACGGGACGTTTACACTAA

Coding sequence (CDS)

ATGGATCTTCCTCTCTTTTCTTTCAATGCCCAACGGAGTTCTACTACTACTAATTCCCGTCGGAAGCCTACTAAATTCATCAAAACAACCACCCTCAATAATGCTTCCGCCACACCCCACAACATCACTCCCCCGTGTTCCGAATGCGGCAAGAAATTCTGTTCATGGAAGGCTCTTTTCGGCCACATGCGCTGCCATCCCGAGCGTCAATGGCGAGGAATCAACCCACCCCCTATTTTCCTCCATCCTCCCTCCGCCGCTCAACTAGATCATGAAATCGCTACCTCTTTGATCATGCTCTCAAATGCCCCACCGGACCCCGGACGTGGAACTTCAGAGGGCAGAGAAGCAGTGGTAGTTTGTGAGCACAAACCAAGGGCACATTCTGGATTATTGGACTTGAATTTGCCTCCTCCAATGGAGGAGATTGAACAGGAATCTTCATCTCCCTATTCATCAGGGATTAAACTGTACGACCATGGGGCTAGGAATTTTTGGATACACAACACAGGTCCTCTAGGATGTTTGGCTCAGAATGTTGTTAAATTTGGACCTGACCCATCAAAGCTTGATGAGTTTGGATTCGTCAGTTCACACAACCAAGCAGCCAAGCTCTTCAATCTACAACTCCGTTGCTCATTGTTAAAATGTGATGGCAACGGTTTAAACAACCTATATCATGGCTTGCTGTGTCTATGGATGGAGGTCCACCTCTTAATTACTACAGTGGAATCATATGTGGAGAAACAAATACCTTGGACGGGACGTTTACACTAA

Protein sequence

MDLPLFSFNAQRSSTTTNSRRKPTKFIKTTTLNNASATPHNITPPCSECGKKFCSWKALFGHMRCHPERQWRGINPPPIFLHPPSAAQLDHEIATSLIMLSNAPPDPGRGTSEGREAVVVCEHKPRAHSGLLDLNLPPPMEEIEQESSSPYSSGIKLYDHGARNFWIHNTGPLGCLAQNVVKFGPDPSKLDEFGFVSSHNQAAKLFNLQLRCSLLKCDGNGLNNLYHGLLCLWMEVHLLITTVESYVEKQIPWTGRLH

Homology

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BLAST of CsaV3_6G010150 vs. NCBI nr
Match: XP_004140060.1 (PREDICTED: zinc finger protein ZAT3 [Cucumis sativus] >KGN46658.1 hypothetical protein Csa_6G118360 [Cucumis sativus])

HSP 1 Score: 329.3 bits (843), Expect = 1.2e-86
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MDLPLFSFNAQRSSTTTNSRRKPTKFIKTTTLNNASATPHNITPPCSECGKKFCSWKALF 60
           MDLPLFSFNAQRSSTTTNSRRKPTKFIKTTTLNNASATPHNITPPCSECGKKFCSWKALF
Sbjct: 1   MDLPLFSFNAQRSSTTTNSRRKPTKFIKTTTLNNASATPHNITPPCSECGKKFCSWKALF 60

Query: 61  GHMRCHPERQWRGINPPPIFLHPPSAAQLDHEIATSLIMLSNAPPDPGRGTSEGREAVVV 120
           GHMRCHPERQWRGINPPPIFLHPPSAAQLDHEIATSLIMLSNAPPDPGRGTSEGREAVVV
Sbjct: 61  GHMRCHPERQWRGINPPPIFLHPPSAAQLDHEIATSLIMLSNAPPDPGRGTSEGREAVVV 120

Query: 121 CEHKPRAHSGLLDLNLPPPMEEIEQESSSPYSSGIKL 158
           CEHKPRAHSGLLDLNLPPPMEEIEQESSSPYSSGI L
Sbjct: 121 CEHKPRAHSGLLDLNLPPPMEEIEQESSSPYSSGIVL 157

[Close]

BLAST of CsaV3_6G010150 vs. NCBI nr
Match: XP_022944064.1 (zinc finger protein ZAT3-like [Cucurbita moschata])

HSP 1 Score: 135.2 bits (339), Expect = 3.2e-28
Identity = 88/165 (53.33%), Postives = 97/165 (58.79%), Query Frame = 0


Query: 18  NSRRKPTKFIKTTT--LNNASA-----------TPHNITPPCSECGKKFCSWKALFGHMR 77
           NSRRK TKFIK T   L++ S            T   IT PC+ECGK F SWKALFGHMR
Sbjct: 49  NSRRKRTKFIKPTAAPLHSPSTPKSKHAKKPDPTAPKITRPCTECGKTFWSWKALFGHMR 108

Query: 78  CHPERQWRGINPPPIFLHPPSAAQLDHEIATSLIMLSNAPP--DPGRGTSEG----RE-- 137
           CHPERQWRGINPPP F    +A   DHEIA  LIML+N P   DP    +E     RE  
Sbjct: 109 CHPERQWRGINPPPNF-RRSTATDEDHEIAACLIMLANGPNAIDPTEAVTETDGDCRENQ 168

Query: 138 --AVVVCEH--KPRAHSGLLDLNLPPPMEEIEQESSSPYSSGIKL 158
               +V E         G LDLNLPPPME+IE+ SSS Y SGI L
Sbjct: 169 ELTALVFEQIDDDDDDHGYLDLNLPPPMEDIEERSSS-YCSGIVL 211

[Close]

BLAST of CsaV3_6G010150 vs. NCBI nr
Match: XP_023512246.1 (zinc finger protein ZAT2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 131.3 bits (329), Expect = 4.6e-27
Identity = 82/179 (45.81%), Postives = 89/179 (49.72%), Query Frame = 0


Query: 18  NSRRKPTKFIKTTTLNNA-----------------SATPHNITPPCSECGKKFCSWKALF 77
           NSRRK TKFI+ TT   A                   T   IT PC+ECGK F SWKALF
Sbjct: 49  NSRRKRTKFIRPTTAAAAPPLHSPSTPKSKHAKKPDPTAPKITRPCTECGKTFWSWKALF 108

Query: 78  GHMRCHPERQWRGINPPPIFLHPPSAAQLDHEIATSLIMLSNAPP--DPGRGTSE----- 137
           GHMRCHPERQWRGINPPP F    +A   DHEIA  LIML+N P   DP    +E     
Sbjct: 109 GHMRCHPERQWRGINPPPNF-RRSTATDEDHEIAACLIMLANGPNAIDPTEAVTETDGDC 168

Query: 138 ---------------GREAVVVCEHKPRAHSGLLDLNLPPPMEEIEQESSSPYSSGIKL 158
                                            LDLNLPPPME+IE+ SSS Y SGI L
Sbjct: 169 RENQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLNLPPPMEDIEEHSSSSYCSGIVL 226

[Close]

BLAST of CsaV3_6G010150 vs. NCBI nr
Match: XP_022986192.1 (zinc finger protein ZAT3-like [Cucurbita maxima])

HSP 1 Score: 129.0 bits (323), Expect = 2.3e-26
Identity = 92/208 (44.23%), Postives = 101/208 (48.56%), Query Frame = 0


Query: 1   MDLP---LFSFN-------AQRSSTTTNSRRKPTKFIKTTT-----LNNASA-------- 60
           MD P   LF FN       +  S    NSRRK TKFIK T      L++ S         
Sbjct: 25  MDSPSRSLFPFNVFPPPSPSHSSLPAPNSRRKRTKFIKPTAAAAVPLHSPSTPKSKHAKK 84

Query: 61  ---TPHNITPPCSECGKKFCSWKALFGHMRCHPERQWRGINPPPIFLHPPSAAQLDHEIA 120
              T   IT PC+ECGK F SWKALFGHMRCHPERQWRGINPPP F    +A   DHEIA
Sbjct: 85  PDPTAPKITRPCTECGKTFWSWKALFGHMRCHPERQWRGINPPPNF-RRSTATDEDHEIA 144

Query: 121 TSLIMLSNAPP--DPGRGTSE-----------------------GREAVVVCEHKPRAHS 158
             LIML+N P   DP    +E                                       
Sbjct: 145 ACLIMLANGPNAIDPTEAVTETDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 204

[Close]

BLAST of CsaV3_6G010150 vs. NCBI nr
Match: XP_022937633.1 (GDSL esterase/lipase At1g54790-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 118.2 bits (295), Expect = 4.0e-23
Identity = 56/72 (77.78%), Postives = 58/72 (80.56%), Query Frame = 0


Query: 149 SPYSSGI-KLYDHGARNFWIHNTGPLGCLAQNVVKFGPDPSKLDEFGFVSSHNQAAKLFN 208
           S + SG+ KLYD GARNFWIHNTGPLGCLAQNV KFG DPSKLDEFG VSSHNQAAKLFN
Sbjct: 206 SEFESGVQKLYDEGARNFWIHNTGPLGCLAQNVAKFGTDPSKLDEFGCVSSHNQAAKLFN 265

Query: 209 LQLRCSLLKCDG 220
           LQL     K  G
Sbjct: 266 LQLHALCKKLQG 277

[Close]

BLAST of CsaV3_6G010150 vs. TAIR10
Match: AT1G54790.2 (GDSL-like Lipase/Acylhydrolase superfamily protein)

HSP 1 Score: 103.2 bits (256), Expect = 2.4e-22
Identity = 46/61 (75.41%), Postives = 52/61 (85.25%), Query Frame = 0


Query: 151 YSSGIK-LYDHGARNFWIHNTGPLGCLAQNVVKFGPDPSKLDEFGFVSSHNQAAKLFNLQ 210
           + +G+K LY+ G RN WIHNTGPLGCLAQN+ KFG D +KLDEFG VSSHNQAAKLFNLQ
Sbjct: 198 FEAGLKRLYEEGGRNIWIHNTGPLGCLAQNIAKFGTDSTKLDEFGCVSSHNQAAKLFNLQ 257

[Close]

BLAST of CsaV3_6G010150 vs. TAIR10
Match: AT4G35280.1 (C2H2-like zinc finger protein)

HSP 1 Score: 98.6 bits (244), Expect = 6.0e-21
Identity = 45/80 (56.25%), Postives = 54/80 (67.50%), Query Frame = 0


Query: 42  ITPPCSECGKKFCSWKALFGHMRCHPERQWRGINPPPIFLHPPSA--------------- 101
           IT PC+ECG+KF SWKALFGHMRCHPERQWRGINPPP +  P +A               
Sbjct: 75  ITRPCTECGRKFWSWKALFGHMRCHPERQWRGINPPPNYRVPTAASSKQLNQILPNWVSF 134

Query: 102 -AQLDHEIATSLIMLSNAPP 106
            ++ DHE+A+ L+MLSN  P
Sbjct: 135 MSEEDHEVASCLLMLSNGTP 154

[Close]

BLAST of CsaV3_6G010150 vs. TAIR10
Match: AT3G05180.1 (GDSL-like Lipase/Acylhydrolase superfamily protein)

HSP 1 Score: 97.4 bits (241), Expect = 1.3e-20
Identity = 47/61 (77.05%), Postives = 49/61 (80.33%), Query Frame = 0


Query: 151 YSSGIK-LYDHGARNFWIHNTGPLGCLAQNVVKFGPDPSKLDEFGFVSSHNQAAKLFNLQ 210
           +  GIK LY  GARN+WIHNTGPLGCLAQ V  FG D SKLDEFG VS HNQAAKLFNLQ
Sbjct: 203 FQDGIKRLYAEGARNYWIHNTGPLGCLAQVVSIFGEDKSKLDEFGCVSDHNQAAKLFNLQ 262

[Close]

BLAST of CsaV3_6G010150 vs. TAIR10
Match: AT2G17180.1 (C2H2-like zinc finger protein)

HSP 1 Score: 81.6 bits (200), Expect = 7.6e-16
Identity = 48/123 (39.02%), Postives = 60/123 (48.78%), Query Frame = 0


Query: 2   DLPLFSFNAQRSSTTTNSRRKPTKFIKTTT-----------LNNASATPHNITPPCSECG 61
           D+P  S N    S   N RRK TK                           I  PC+ECG
Sbjct: 12  DIPFASSNVTLPSYNQNPRRKRTKLTNNEVGSXXXXXXXXXXXXXXXXASQIARPCTECG 71

Query: 62  KKFCSWKALFGHMRCHPERQWRGINPPPIFLHPPSA-----------AQLDHEIATSLIM 103
           K+F S KALFGHMRCHPERQWRGINPP  F    ++           ++ +H IA+ L+M
Sbjct: 72  KQFGSLKALFGHMRCHPERQWRGINPPSNFKRRINSNAASXXXXWDPSEEEHNIASCLLM 131

[Close]

BLAST of CsaV3_6G010150 vs. TAIR10
Match: AT1G09390.1 (GDSL-like Lipase/Acylhydrolase superfamily protein)

HSP 1 Score: 62.0 bits (149), Expect = 6.2e-10
Identity = 38/82 (46.34%), Postives = 47/82 (57.32%), Query Frame = 0


Query: 149 SPYSSGIK-LYDHGARNFWIHNTGPLGCLAQNVVKFGPDPSK-LDEFGFVSSHNQAAKLF 208
           S   S IK LYD G R FW+HNTGPLGCL Q   K     SK  D+ G ++++N AAKLF
Sbjct: 198 SEIKSAIKILYDEGGRKFWVHNTGPLGCLPQ---KLSMVHSKGFDKHGCLATYNAAAKLF 257

Query: 209 N--LQLRCSLLKCDGNGLNNLY 227
           N  L   C  L+ +    N +Y
Sbjct: 258 NEGLDHMCRDLRTELKEANIVY 276

[Close]

BLAST of CsaV3_6G010150 vs. Swiss-Prot
Match: sp|Q3ECP6|GDL22_ARATH (GDSL esterase/lipase At1g54790 OS=Arabidopsis thaliana OX=3702 GN=At1g54790 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.4e-21
Identity = 46/61 (75.41%), Postives = 52/61 (85.25%), Query Frame = 0


Query: 151 YSSGIK-LYDHGARNFWIHNTGPLGCLAQNVVKFGPDPSKLDEFGFVSSHNQAAKLFNLQ 210
           + +G+K LY+ G RN WIHNTGPLGCLAQN+ KFG D +KLDEFG VSSHNQAAKLFNLQ
Sbjct: 198 FEAGLKRLYEEGGRNIWIHNTGPLGCLAQNIAKFGTDSTKLDEFGCVSSHNQAAKLFNLQ 257

[Close]

BLAST of CsaV3_6G010150 vs. Swiss-Prot
Match: sp|O65499|ZAT3_ARATH (Zinc finger protein ZAT3 OS=Arabidopsis thaliana OX=3702 GN=ZAT3 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.1e-19
Identity = 45/80 (56.25%), Postives = 54/80 (67.50%), Query Frame = 0


Query: 42  ITPPCSECGKKFCSWKALFGHMRCHPERQWRGINPPPIFLHPPSA--------------- 101
           IT PC+ECG+KF SWKALFGHMRCHPERQWRGINPPP +  P +A               
Sbjct: 75  ITRPCTECGRKFWSWKALFGHMRCHPERQWRGINPPPNYRVPTAASSKQLNQILPNWVSF 134

Query: 102 -AQLDHEIATSLIMLSNAPP 106
            ++ DHE+A+ L+MLSN  P
Sbjct: 135 MSEEDHEVASCLLMLSNGTP 154

[Close]

BLAST of CsaV3_6G010150 vs. Swiss-Prot
Match: sp|Q9MAA1|GDL49_ARATH (GDSL esterase/lipase At3g05180 OS=Arabidopsis thaliana OX=3702 GN=At3g05180 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.4e-19
Identity = 47/61 (77.05%), Postives = 49/61 (80.33%), Query Frame = 0


Query: 151 YSSGIK-LYDHGARNFWIHNTGPLGCLAQNVVKFGPDPSKLDEFGFVSSHNQAAKLFNLQ 210
           +  GIK LY  GARN+WIHNTGPLGCLAQ V  FG D SKLDEFG VS HNQAAKLFNLQ
Sbjct: 203 FQDGIKRLYAEGARNYWIHNTGPLGCLAQVVSIFGEDKSKLDEFGCVSDHNQAAKLFNLQ 262

[Close]

BLAST of CsaV3_6G010150 vs. Swiss-Prot
Match: sp|Q9SIJ0|ZAT2_ARATH (Zinc finger protein ZAT2 OS=Arabidopsis thaliana OX=3702 GN=ZAT2 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.4e-14
Identity = 48/123 (39.02%), Postives = 60/123 (48.78%), Query Frame = 0


Query: 2   DLPLFSFNAQRSSTTTNSRRKPTKFIKTTT-----------LNNASATPHNITPPCSECG 61
           D+P  S N    S   N RRK TK                           I  PC+ECG
Sbjct: 12  DIPFASSNVTLPSYNQNPRRKRTKLTNNEVGSXXXXXXXXXXXXXXXXASQIARPCTECG 71

Query: 62  KKFCSWKALFGHMRCHPERQWRGINPPPIFLHPPSA-----------AQLDHEIATSLIM 103
           K+F S KALFGHMRCHPERQWRGINPP  F    ++           ++ +H IA+ L+M
Sbjct: 72  KQFGSLKALFGHMRCHPERQWRGINPPSNFKRRINSNAASXXXXWDPSEEEHNIASCLLM 131

[Close]

BLAST of CsaV3_6G010150 vs. Swiss-Prot
Match: sp|O80522|GDL2_ARATH (GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana OX=3702 GN=At1g09390 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.1e-08
Identity = 38/82 (46.34%), Postives = 47/82 (57.32%), Query Frame = 0


Query: 149 SPYSSGIK-LYDHGARNFWIHNTGPLGCLAQNVVKFGPDPSK-LDEFGFVSSHNQAAKLF 208
           S   S IK LYD G R FW+HNTGPLGCL Q   K     SK  D+ G ++++N AAKLF
Sbjct: 198 SEIKSAIKILYDEGGRKFWVHNTGPLGCLPQ---KLSMVHSKGFDKHGCLATYNAAAKLF 257

Query: 209 N--LQLRCSLLKCDGNGLNNLY 227
           N  L   C  L+ +    N +Y
Sbjct: 258 NEGLDHMCRDLRTELKEANIVY 276

[Close]

BLAST of CsaV3_6G010150 vs. TrEMBL
Match: tr|A0A0A0KAW8|A0A0A0KAW8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G118360 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 7.6e-87
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MDLPLFSFNAQRSSTTTNSRRKPTKFIKTTTLNNASATPHNITPPCSECGKKFCSWKALF 60
           MDLPLFSFNAQRSSTTTNSRRKPTKFIKTTTLNNASATPHNITPPCSECGKKFCSWKALF
Sbjct: 1   MDLPLFSFNAQRSSTTTNSRRKPTKFIKTTTLNNASATPHNITPPCSECGKKFCSWKALF 60

Query: 61  GHMRCHPERQWRGINPPPIFLHPPSAAQLDHEIATSLIMLSNAPPDPGRGTSEGREAVVV 120
           GHMRCHPERQWRGINPPPIFLHPPSAAQLDHEIATSLIMLSNAPPDPGRGTSEGREAVVV
Sbjct: 61  GHMRCHPERQWRGINPPPIFLHPPSAAQLDHEIATSLIMLSNAPPDPGRGTSEGREAVVV 120

Query: 121 CEHKPRAHSGLLDLNLPPPMEEIEQESSSPYSSGIKL 158
           CEHKPRAHSGLLDLNLPPPMEEIEQESSSPYSSGI L
Sbjct: 121 CEHKPRAHSGLLDLNLPPPMEEIEQESSSPYSSGIVL 157

[Close]

BLAST of CsaV3_6G010150 vs. TrEMBL
Match: tr|A0A1S3BZK6|A0A1S3BZK6_CUCME (GDSL esterase/lipase At1g54790-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495321 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.3e-22
Identity = 54/70 (77.14%), Postives = 57/70 (81.43%), Query Frame = 0


Query: 151 YSSGI-KLYDHGARNFWIHNTGPLGCLAQNVVKFGPDPSKLDEFGFVSSHNQAAKLFNLQ 210
           + SG+ +LYD GARNFWIHNTGPLGCLAQNV KFG DPSKLDEFG VSSHNQAAKLFNLQ
Sbjct: 201 FESGVQRLYDQGARNFWIHNTGPLGCLAQNVAKFGTDPSKLDEFGCVSSHNQAAKLFNLQ 260

Query: 211 LRCSLLKCDG 220
           L     K  G
Sbjct: 261 LHALCKKLQG 270

[Close]

BLAST of CsaV3_6G010150 vs. TrEMBL
Match: tr|A0A1S3C007|A0A1S3C007_CUCME (GDSL esterase/lipase At1g54790-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495321 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.3e-22
Identity = 54/70 (77.14%), Postives = 57/70 (81.43%), Query Frame = 0


Query: 151 YSSGI-KLYDHGARNFWIHNTGPLGCLAQNVVKFGPDPSKLDEFGFVSSHNQAAKLFNLQ 210
           + SG+ +LYD GARNFWIHNTGPLGCLAQNV KFG DPSKLDEFG VSSHNQAAKLFNLQ
Sbjct: 195 FESGVQRLYDQGARNFWIHNTGPLGCLAQNVAKFGTDPSKLDEFGCVSSHNQAAKLFNLQ 254

Query: 211 LRCSLLKCDG 220
           L     K  G
Sbjct: 255 LHALCKKLQG 264

[Close]

BLAST of CsaV3_6G010150 vs. TrEMBL
Match: tr|A0A0A0LGA7|A0A0A0LGA7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G020960 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.7e-22
Identity = 54/70 (77.14%), Postives = 57/70 (81.43%), Query Frame = 0


Query: 151 YSSGI-KLYDHGARNFWIHNTGPLGCLAQNVVKFGPDPSKLDEFGFVSSHNQAAKLFNLQ 210
           + SG+ KL+D GARNFWIHNTGPLGCLAQNV KFG DPSKLDEFG VSSHNQAAKLFNLQ
Sbjct: 195 FESGVQKLFDQGARNFWIHNTGPLGCLAQNVAKFGTDPSKLDEFGCVSSHNQAAKLFNLQ 254

Query: 211 LRCSLLKCDG 220
           L     K  G
Sbjct: 255 LHALCKKLQG 264

[Close]

BLAST of CsaV3_6G010150 vs. TrEMBL
Match: tr|A0A2P5EIX3|A0A2P5EIX3_9ROSA (Lipase OS=Trema orientalis OX=63057 GN=TorRG33x02_186500 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 3.3e-21
Identity = 53/72 (73.61%), Postives = 56/72 (77.78%), Query Frame = 0


Query: 149 SPYSSGI-KLYDHGARNFWIHNTGPLGCLAQNVVKFGPDPSKLDEFGFVSSHNQAAKLFN 208
           S + +GI KLYD GARNFWIHNTGPLGCL QNV+KFG DPSKLDE G VS HNQAAKLFN
Sbjct: 296 SEFETGIKKLYDQGARNFWIHNTGPLGCLTQNVLKFGTDPSKLDEQGCVSGHNQAAKLFN 355

Query: 209 LQLRCSLLKCDG 220
           LQL     K  G
Sbjct: 356 LQLHALAKKLQG 367

The following BLAST results are available for this feature:

BLAST of CsaV3_6G010150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140060.1	1.2e-86	99.36	PREDICTED: zinc finger protein ZAT3 [Cucumis sativus] >KGN46658.1 hypothetical p...	[more]
XP_022944064.1	3.2e-28	53.33	zinc finger protein ZAT3-like [Cucurbita moschata]	[more]
XP_023512246.1	4.6e-27	45.81	zinc finger protein ZAT2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022986192.1	2.3e-26	44.23	zinc finger protein ZAT3-like [Cucurbita maxima]	[more]
XP_022937633.1	4.0e-23	77.78	GDSL esterase/lipase At1g54790-like isoform X2 [Cucurbita moschata]	[more]

BLAST of CsaV3_6G010150 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G54790.2	2.4e-22	75.41	GDSL-like Lipase/Acylhydrolase superfamily protein	[more]
AT4G35280.1	6.0e-21	56.25	C2H2-like zinc finger protein	[more]
AT3G05180.1	1.3e-20	77.05	GDSL-like Lipase/Acylhydrolase superfamily protein	[more]
AT2G17180.1	7.6e-16	39.02	C2H2-like zinc finger protein	[more]
AT1G09390.1	6.2e-10	46.34	GDSL-like Lipase/Acylhydrolase superfamily protein	[more]

BLAST of CsaV3_6G010150 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q3ECP6\|GDL22_ARATH	4.4e-21	75.41	GDSL esterase/lipase At1g54790 OS=Arabidopsis thaliana OX=3702 GN=At1g54790 PE=2...	[more]
sp\|O65499\|ZAT3_ARATH	1.1e-19	56.25	Zinc finger protein ZAT3 OS=Arabidopsis thaliana OX=3702 GN=ZAT3 PE=1 SV=1	[more]
sp\|Q9MAA1\|GDL49_ARATH	2.4e-19	77.05	GDSL esterase/lipase At3g05180 OS=Arabidopsis thaliana OX=3702 GN=At3g05180 PE=2...	[more]
sp\|Q9SIJ0\|ZAT2_ARATH	1.4e-14	39.02	Zinc finger protein ZAT2 OS=Arabidopsis thaliana OX=3702 GN=ZAT2 PE=1 SV=1	[more]
sp\|O80522\|GDL2_ARATH	1.1e-08	46.34	GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana OX=3702 GN=At1g09390 PE=2...	[more]

BLAST of CsaV3_6G010150 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KAW8\|A0A0A0KAW8_CUCSA	7.6e-87	99.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G118360 PE=4 SV=1	[more]
tr\|A0A1S3BZK6\|A0A1S3BZK6_CUCME	1.3e-22	77.14	GDSL esterase/lipase At1g54790-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|A0A1S3C007\|A0A1S3C007_CUCME	1.3e-22	77.14	GDSL esterase/lipase At1g54790-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|A0A0A0LGA7\|A0A0A0LGA7_CUCSA	1.7e-22	77.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G020960 PE=3 SV=1	[more]
tr\|A0A2P5EIX3\|A0A2P5EIX3_9ROSA	3.3e-21	73.61	Lipase OS=Trema orientalis OX=63057 GN=TorRG33x02_186500 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036236	Znf_C2H2_sf
IPR013087	Znf_C2H2_type

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009987	cellular process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G010150.1	CsaV3_6G010150.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 46..68 e-value: 5.5E-6 score: 26.1
None	No IPR available	PANTHER	PTHR26374:SF215	SUBFAMILY NOT NAMED	coord: 31..111
None	No IPR available	PANTHER	PTHR26374	FAMILY NOT NAMED	coord: 31..111
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 46..66
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 44..71 score: 9.556
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	SSF57667	beta-beta-alpha zinc fingers	coord: 45..69

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_6G010150	CSPI06G09700	Wild cucumber (PI 183967)	cpicucB364
CsaV3_6G010150	Cucsa.119850	Cucumber (Gy14) v1	cgycucB159
CsaV3_6G010150	Cucsa.099630	Cucumber (Gy14) v1	cgycucB115
CsaV3_6G010150	CmaCh11G013360	Cucurbita maxima (Rimu)	cmacucB0164
CsaV3_6G010150	CmaCh19G007930	Cucurbita maxima (Rimu)	cmacucB0632
CsaV3_6G010150	CmoCh19G008140	Cucurbita moschata (Rifu)	cmocucB0617
CsaV3_6G010150	CmoCh20G007130	Cucurbita moschata (Rifu)	cmocucB0653
CsaV3_6G010150	Cp4.1LG15g06370	Cucurbita pepo (Zucchini)	cpecucB0316
CsaV3_6G010150	Cp4.1LG16g03520	Cucurbita pepo (Zucchini)	cpecucB0361
CsaV3_6G010150	CsGy6G009820	Cucumber (Gy14) v2	cgybcucB298
CsaV3_6G010150	CsGy7G001630	Cucumber (Gy14) v2	cgybcucB344
CsaV3_6G010150	Carg04091	Silver-seed gourd	carcucB0231
CsaV3_6G010150	Carg16136	Silver-seed gourd	carcucB0382
CsaV3_6G010150	Cla015751	Watermelon (97103) v1	cucwmB541
CsaV3_6G010150	ClCG02G003500	Watermelon (Charleston Gray)	cucwcgB464
CsaV3_6G010150	Lsi10G008280	Bottle gourd (USVL1VR-Ls)	cuclsiB432
CsaV3_6G010150	Lsi11G012800	Bottle gourd (USVL1VR-Ls)	cuclsiB455
CsaV3_6G010150	Cla97C02G030100	Watermelon (97103) v2	cucwmbB450
CsaV3_6G010150	Bhi05G001363	Wax gourd	cucwgoB579

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsaV3_6G010150	CsaV3_7G001810	Cucumber (Chinese Long) v3	cuccucB214

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_6G010150	Silver-seed gourd	carcucB0896
CsaV3_6G010150	Cucurbita maxima (Rimu)	cmacucB0667
CsaV3_6G010150	Cucurbita maxima (Rimu)	cmacucB0757
CsaV3_6G010150	Cucurbita moschata (Rifu)	cmocucB0745
CsaV3_6G010150	Cucurbita pepo (Zucchini)	cpecucB0925
CsaV3_6G010150	Melon (DHL92) v3.5.1	cucmeB431
CsaV3_6G010150	Melon (DHL92) v3.6.1	cucmedB421
CsaV3_6G010150	Watermelon (Charleston Gray)	cucwcgB478
CsaV3_6G010150	Watermelon (97103) v1	cucwmB469
CsaV3_6G010150	Watermelon (97103) v2	cucwmbB449
CsaV3_6G010150	Watermelon (97103) v2	cucwmbB465