CsaV3_3G040700 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTATGCAACCATTTCTATTTTTCCTTTCTTCCCTTGTAAAGAGAGAGAGAAAAAGGGGCTTTGCATTTCTCATGAACTGTGGAGTTGTGTTGGGTTTCTATTGTTGGGGTTGGGTGTTCTTAACTGCCCTTCTTCTCTTCTCCTCCTAAAACTCCTAAATTATTTATATATATCCTTCATATATATATTTATATATATTCTTCATTGCTTTTCTGTTTCTATTGGTGTTTTTCTTGTGGGAGAGGCAATGGTAAGCCTGGGTAATGTGTGTGATCAGCTGGACTCTATTGGCGCCGTCCGCGAGTTGGCTCCATCGCCGTTCTTGACCAAAACCTACATGCTTGTTGAGGATCCGATGACAGACGACGTCATATCGTGGAACTCCGATGGGACGACCTTCATCGTATGGCAGCCACCGGAGTTTGCAATAGATCTCCTACCCACCCTCTTCAAACACAACAACTTCTCAAGCTTTGTTCGCCAACTTAACACCTATGTAAGTTGAATATTGTTGTGTTTATACATGTAATTCATTCTTTTCTCAAAATTATTGTCTTCAATTACTTGAGGAGTGAATCTATTTATCTACTTGTTTCGATTTCGATTTTGGTAGGTTTGATTTAGAGTTCGTTTGATTACGATTTTGTTATAATAATATTGCAAATTGGTAGGTTTGATTTAGAACTCTTTCATTACGATTTTGTTATAATAATATAACAAATTTTTTATATAGTTTTAAGTTTTGAAATTATAGGGAAAAAAAATAAAAACGAAGAGAAATCACAAGAGGATTTAAATTTAGAAAGTGAGAAACCAATAGAGATATTGGTAGATATTGCAAAGTTTGACTTGAAATAAAAAATTTGCATATTTTAGCTATGAAGAAAAATATTATTCTTTAATGGTTACAAGTGCTATCCTATTTTAAATATTTATTCTTGACTATAAGTTATTTTACCATAGTAATAAAATATTTTTCAACATTTAATGACGTTACATTACATCTCTTGCACAGTTTGAAATGTTTCTGAATTTCTACCCATCTAATTGTAAAACTATATACTAAAAATAATAAAAAGAAAAGGTCAAGATATATTAAAAAAATAATAATGATAATTAAACATGATGACTGTTTTTACTGCTGACAGAAAAGTTTGTATCATGCTTACATGGATTTTTTTTTTTCTATTTGGATAATCTAGAAGTTTTTCAAAGATACTTAAATTAATATAGAACTTTGAAATCGTAATCTTTTATTTTTTTAAAATAGACAACGTGGCTTCAAACAATAATCTTGTGTTAAAAGTATGAACTTTTGAGTTTGGTAGAAATTTCAAATTATATGAAAATAGAGGTCTAATAATCAAGAGTAATTTCTCCACTATTTATATTGATCAAAATTATACGTAACCAAACTTTGATGTAGGGATTTCGCAAGATTGCAACAAGCAGGTGGGAGTTTTACAATGAGAAGTTTAAAAAGGGATGTAAAGAAAGACTATGCGAAATACACCGAAGAAAAGCATGGACCAACAAGCGAAAACACAATAGTAATGCAAAAGCAATCCAAGTCACACATCAAGATAATCACGATGAAGATCAAAGGTCGTTGTCGACTTCATCGTCTGATGATCAATACACAATGCTTGCTTATGAAAACAAGAAGTTGAAAAAGGAGAATGGAGTATTGAGCTTTGAACTAACAAACATGAAGAAGAAATGCAGAGAGCTTCTTGATTTGGTGGCCAAGTACAAATTCGTGGTTGTTAATGGCAACAAAAAGAAGGCAGATGAGATAATGATGAAGCCAAACTTGAAACTCTTTGGAGTGAAGTTGGAGGTTGAGGAAGAAGATGAAATGGAAATCAAGCAAAACAAGAGGAAGAGATCAAATTATCCAGATAAACCTTTTCTGCTCTCACAAACATGCAAATGAATTTGCTTCCATCGAACA ATGGTAAGCCTGGGTAATGTGTGTGATCAGCTGGACTCTATTGGCGCCGTCCGCGAGTTGGCTCCATCGCCGTTCTTGACCAAAACCTACATGCTTGTTGAGGATCCGATGACAGACGACGTCATATCGTGGAACTCCGATGGGACGACCTTCATCGTATGGCAGCCACCGGAGTTTGCAATAGATCTCCTACCCACCCTCTTCAAACACAACAACTTCTCAAGCTTTGTTCGCCAACTTAACACCTATGGATTTCGCAAGATTGCAACAAGCAGGTGGGAGTTTTACAATGAGAAGTTTAAAAAGGGATGTAAAGAAAGACTATGCGAAATACACCGAAGAAAAGCATGGACCAACAAGCGAAAACACAATAGTAATGCAAAAGCAATCCAAGTCACACATCAAGATAATCACGATGAAGATCAAAGGTCGTTGTCGACTTCATCGTCTGATGATCAATACACAATGCTTGCTTATGAAAACAAGAAGTTGAAAAAGGAGAATGGAGTATTGAGCTTTGAACTAACAAACATGAAGAAGAAATGCAGAGAGCTTCTTGATTTGGTGGCCAAGTACAAATTCGTGGTTGTTAATGGCAACAAAAAGAAGGCAGATGAGATAATGATGAAGCCAAACTTGAAACTCTTTGGAGTGAAGTTGGAGGTTGAGGAAGAAGATGAAATGGAAATCAAGCAAAACAAGAGGAAGAGATCAAATTATCCAGATAAACCTTTTCTGCTCTCACAAACATGCAAATGA ATGGTAAGCCTGGGTAATGTGTGTGATCAGCTGGACTCTATTGGCGCCGTCCGCGAGTTGGCTCCATCGCCGTTCTTGACCAAAACCTACATGCTTGTTGAGGATCCGATGACAGACGACGTCATATCGTGGAACTCCGATGGGACGACCTTCATCGTATGGCAGCCACCGGAGTTTGCAATAGATCTCCTACCCACCCTCTTCAAACACAACAACTTCTCAAGCTTTGTTCGCCAACTTAACACCTATGGATTTCGCAAGATTGCAACAAGCAGGTGGGAGTTTTACAATGAGAAGTTTAAAAAGGGATGTAAAGAAAGACTATGCGAAATACACCGAAGAAAAGCATGGACCAACAAGCGAAAACACAATAGTAATGCAAAAGCAATCCAAGTCACACATCAAGATAATCACGATGAAGATCAAAGGTCGTTGTCGACTTCATCGTCTGATGATCAATACACAATGCTTGCTTATGAAAACAAGAAGTTGAAAAAGGAGAATGGAGTATTGAGCTTTGAACTAACAAACATGAAGAAGAAATGCAGAGAGCTTCTTGATTTGGTGGCCAAGTACAAATTCGTGGTTGTTAATGGCAACAAAAAGAAGGCAGATGAGATAATGATGAAGCCAAACTTGAAACTCTTTGGAGTGAAGTTGGAGGTTGAGGAAGAAGATGAAATGGAAATCAAGCAAAACAAGAGGAAGAGATCAAATTATCCAGATAAACCTTTTCTGCTCTCACAAACATGCAAATGA MVSLGNVCDQLDSIGAVRELAPSPFLTKTYMLVEDPMTDDVISWNSDGTTFIVWQPPEFAIDLLPTLFKHNNFSSFVRQLNTYGFRKIATSRWEFYNEKFKKGCKERLCEIHRRKAWTNKRKHNSNAKAIQVTHQDNHDEDQRSLSTSSSDDQYTMLAYENKKLKKENGVLSFELTNMKKKCRELLDLVAKYKFVVVNGNKKKADEIMMKPNLKLFGVKLEVEEEDEMEIKQNKRKRSNYPDKPFLLSQTCK
BLAST of CsaV3_3G040700 vs. NCBI nr
Match: XP_004136787.1 (PREDICTED: heat stress transcription factor B-3-like [Cucumis sativus] >KGN59494.1 hypothetical protein Csa_3G822450 [Cucumis sativus]) HSP 1 Score: 507.7 bits (1306), Expect = 2.3e-140 Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0
BLAST of CsaV3_3G040700 vs. NCBI nr
Match: XP_008443318.1 (PREDICTED: heat stress transcription factor B-3-like [Cucumis melo]) HSP 1 Score: 449.1 bits (1154), Expect = 9.7e-123 Identity = 224/252 (88.89%), Postives = 236/252 (93.65%), Query Frame = 0
BLAST of CsaV3_3G040700 vs. NCBI nr
Match: XP_022973345.1 (heat stress transcription factor B-3-like [Cucurbita maxima]) HSP 1 Score: 303.9 bits (777), Expect = 5.1e-79 Identity = 162/237 (68.35%), Postives = 184/237 (77.64%), Query Frame = 0
BLAST of CsaV3_3G040700 vs. NCBI nr
Match: XP_022156836.1 (heat stress transcription factor B-3-like [Momordica charantia]) HSP 1 Score: 282.7 bits (722), Expect = 1.2e-72 Identity = 150/233 (64.38%), Postives = 171/233 (73.39%), Query Frame = 0
BLAST of CsaV3_3G040700 vs. NCBI nr
Match: XP_023521033.1 (heat stress transcription factor B-3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 278.5 bits (711), Expect = 2.3e-71 Identity = 150/237 (63.29%), Postives = 176/237 (74.26%), Query Frame = 0
BLAST of CsaV3_3G040700 vs. TAIR10
Match: AT2G41690.1 (heat shock transcription factor B3) HSP 1 Score: 181.4 bits (459), Expect = 6.9e-46 Identity = 104/209 (49.76%), Postives = 128/209 (61.24%), Query Frame = 0
BLAST of CsaV3_3G040700 vs. TAIR10
Match: AT1G46264.1 (heat shock transcription factor B4) HSP 1 Score: 156.4 bits (394), Expect = 2.4e-38 Identity = 71/94 (75.53%), Postives = 77/94 (81.91%), Query Frame = 0
BLAST of CsaV3_3G040700 vs. TAIR10
Match: AT4G11660.1 (winged-helix DNA-binding transcription factor family protein) HSP 1 Score: 146.4 bits (368), Expect = 2.5e-35 Identity = 68/94 (72.34%), Postives = 77/94 (81.91%), Query Frame = 0
BLAST of CsaV3_3G040700 vs. TAIR10
Match: AT4G17750.1 (heat shock factor 1) HSP 1 Score: 136.7 bits (343), Expect = 1.9e-32 Identity = 75/162 (46.30%), Postives = 103/162 (63.58%), Query Frame = 0
BLAST of CsaV3_3G040700 vs. TAIR10
Match: AT4G36990.1 (heat shock factor 4) HSP 1 Score: 133.3 bits (334), Expect = 2.1e-31 Identity = 57/101 (56.44%), Postives = 76/101 (75.25%), Query Frame = 0
BLAST of CsaV3_3G040700 vs. Swiss-Prot
Match: sp|O22230|HSFB3_ARATH (Heat stress transcription factor B-3 OS=Arabidopsis thaliana OX=3702 GN=HSFB3 PE=1 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 1.2e-44 Identity = 104/209 (49.76%), Postives = 128/209 (61.24%), Query Frame = 0
BLAST of CsaV3_3G040700 vs. Swiss-Prot
Match: sp|P22335|HSF24_SOLPE (Heat shock factor protein HSF24 OS=Solanum peruvianum OX=4082 GN=HSF24 PE=2 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 8.3e-41 Identity = 94/185 (50.81%), Postives = 115/185 (62.16%), Query Frame = 0
BLAST of CsaV3_3G040700 vs. Swiss-Prot
Match: sp|Q9C635|HSFB4_ARATH (Heat stress transcription factor B-4 OS=Arabidopsis thaliana OX=3702 GN=HSFB4 PE=2 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 4.3e-37 Identity = 71/94 (75.53%), Postives = 77/94 (81.91%), Query Frame = 0
BLAST of CsaV3_3G040700 vs. Swiss-Prot
Match: sp|Q652B0|HFB2C_ORYSJ (Heat stress transcription factor B-2c OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB2C PE=2 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 9.5e-37 Identity = 70/94 (74.47%), Postives = 78/94 (82.98%), Query Frame = 0
BLAST of CsaV3_3G040700 vs. Swiss-Prot
Match: sp|Q10KX8|HFB4D_ORYSJ (Heat stress transcription factor B-4d OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB4D PE=3 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 9.5e-37 Identity = 70/95 (73.68%), Postives = 77/95 (81.05%), Query Frame = 0
BLAST of CsaV3_3G040700 vs. TrEMBL
Match: tr|A0A0A0LF37|A0A0A0LF37_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G822450 PE=3 SV=1) HSP 1 Score: 507.7 bits (1306), Expect = 1.5e-140 Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0
BLAST of CsaV3_3G040700 vs. TrEMBL
Match: tr|A0A1S3B7P7|A0A1S3B7P7_CUCME (heat stress transcription factor B-3-like OS=Cucumis melo OX=3656 GN=LOC103486932 PE=3 SV=1) HSP 1 Score: 449.1 bits (1154), Expect = 6.4e-123 Identity = 224/252 (88.89%), Postives = 236/252 (93.65%), Query Frame = 0
BLAST of CsaV3_3G040700 vs. TrEMBL
Match: tr|A0A0L9U7H4|A0A0L9U7H4_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan03g213700 PE=3 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 4.7e-65 Identity = 146/235 (62.13%), Postives = 177/235 (75.32%), Query Frame = 0
BLAST of CsaV3_3G040700 vs. TrEMBL
Match: tr|A0A0S3RXR4|A0A0S3RXR4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G277300 PE=3 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 4.7e-65 Identity = 146/235 (62.13%), Postives = 177/235 (75.32%), Query Frame = 0
BLAST of CsaV3_3G040700 vs. TrEMBL
Match: tr|I1N8Z6|I1N8Z6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100786140 PE=3 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 4.0e-64 Identity = 147/235 (62.55%), Postives = 176/235 (74.89%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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