CsaV3_3G040700.1 (mRNA) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G040700.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	heat stress transcription factor B-3-like
Location	chr3 : 33371076 .. 33373029 (-)
Sequence length	759

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATGCAACCATTTCTATTTTTCCTTTCTTCCCTTGTAAAGAGAGAGAGAAAAAGGGGCTTTGCATTTCTCATGAACTGTGGAGTTGTGTTGGGTTTCTATTGTTGGGGTTGGGTGTTCTTAACTGCCCTTCTTCTCTTCTCCTCCTAAAACTCCTAAATTATTTATATATATCCTTCATATATATATTTATATATATTCTTCATTGCTTTTCTGTTTCTATTGGTGTTTTTCTTGTGGGAGAGGCAATGGTAAGCCTGGGTAATGTGTGTGATCAGCTGGACTCTATTGGCGCCGTCCGCGAGTTGGCTCCATCGCCGTTCTTGACCAAAACCTACATGCTTGTTGAGGATCCGATGACAGACGACGTCATATCGTGGAACTCCGATGGGACGACCTTCATCGTATGGCAGCCACCGGAGTTTGCAATAGATCTCCTACCCACCCTCTTCAAACACAACAACTTCTCAAGCTTTGTTCGCCAACTTAACACCTATGTAAGTTGAATATTGTTGTGTTTATACATGTAATTCATTCTTTTCTCAAAATTATTGTCTTCAATTACTTGAGGAGTGAATCTATTTATCTACTTGTTTCGATTTCGATTTTGGTAGGTTTGATTTAGAGTTCGTTTGATTACGATTTTGTTATAATAATATTGCAAATTGGTAGGTTTGATTTAGAACTCTTTCATTACGATTTTGTTATAATAATATAACAAATTTTTTATATAGTTTTAAGTTTTGAAATTATAGGGAAAAAAAATAAAAACGAAGAGAAATCACAAGAGGATTTAAATTTAGAAAGTGAGAAACCAATAGAGATATTGGTAGATATTGCAAAGTTTGACTTGAAATAAAAAATTTGCATATTTTAGCTATGAAGAAAAATATTATTCTTTAATGGTTACAAGTGCTATCCTATTTTAAATATTTATTCTTGACTATAAGTTATTTTACCATAGTAATAAAATATTTTTCAACATTTAATGACGTTACATTACATCTCTTGCACAGTTTGAAATGTTTCTGAATTTCTACCCATCTAATTGTAAAACTATATACTAAAAATAATAAAAAGAAAAGGTCAAGATATATTAAAAAAATAATAATGATAATTAAACATGATGACTGTTTTTACTGCTGACAGAAAAGTTTGTATCATGCTTACATGGATTTTTTTTTTTCTATTTGGATAATCTAGAAGTTTTTCAAAGATACTTAAATTAATATAGAACTTTGAAATCGTAATCTTTTATTTTTTTAAAATAGACAACGTGGCTTCAAACAATAATCTTGTGTTAAAAGTATGAACTTTTGAGTTTGGTAGAAATTTCAAATTATATGAAAATAGAGGTCTAATAATCAAGAGTAATTTCTCCACTATTTATATTGATCAAAATTATACGTAACCAAACTTTGATGTAGGGATTTCGCAAGATTGCAACAAGCAGGTGGGAGTTTTACAATGAGAAGTTTAAAAAGGGATGTAAAGAAAGACTATGCGAAATACACCGAAGAAAAGCATGGACCAACAAGCGAAAACACAATAGTAATGCAAAAGCAATCCAAGTCACACATCAAGATAATCACGATGAAGATCAAAGGTCGTTGTCGACTTCATCGTCTGATGATCAATACACAATGCTTGCTTATGAAAACAAGAAGTTGAAAAAGGAGAATGGAGTATTGAGCTTTGAACTAACAAACATGAAGAAGAAATGCAGAGAGCTTCTTGATTTGGTGGCCAAGTACAAATTCGTGGTTGTTAATGGCAACAAAAAGAAGGCAGATGAGATAATGATGAAGCCAAACTTGAAACTCTTTGGAGTGAAGTTGGAGGTTGAGGAAGAAGATGAAATGGAAATCAAGCAAAACAAGAGGAAGAGATCAAATTATCCAGATAAACCTTTTCTGCTCTCACAAACATGCAAATGAATTTGCTTCCATCGAACA

mRNA sequence

ATGGTAAGCCTGGGTAATGTGTGTGATCAGCTGGACTCTATTGGCGCCGTCCGCGAGTTGGCTCCATCGCCGTTCTTGACCAAAACCTACATGCTTGTTGAGGATCCGATGACAGACGACGTCATATCGTGGAACTCCGATGGGACGACCTTCATCGTATGGCAGCCACCGGAGTTTGCAATAGATCTCCTACCCACCCTCTTCAAACACAACAACTTCTCAAGCTTTGTTCGCCAACTTAACACCTATGGATTTCGCAAGATTGCAACAAGCAGGTGGGAGTTTTACAATGAGAAGTTTAAAAAGGGATGTAAAGAAAGACTATGCGAAATACACCGAAGAAAAGCATGGACCAACAAGCGAAAACACAATAGTAATGCAAAAGCAATCCAAGTCACACATCAAGATAATCACGATGAAGATCAAAGGTCGTTGTCGACTTCATCGTCTGATGATCAATACACAATGCTTGCTTATGAAAACAAGAAGTTGAAAAAGGAGAATGGAGTATTGAGCTTTGAACTAACAAACATGAAGAAGAAATGCAGAGAGCTTCTTGATTTGGTGGCCAAGTACAAATTCGTGGTTGTTAATGGCAACAAAAAGAAGGCAGATGAGATAATGATGAAGCCAAACTTGAAACTCTTTGGAGTGAAGTTGGAGGTTGAGGAAGAAGATGAAATGGAAATCAAGCAAAACAAGAGGAAGAGATCAAATTATCCAGATAAACCTTTTCTGCTCTCACAAACATGCAAATGA

Coding sequence (CDS)

ATGGTAAGCCTGGGTAATGTGTGTGATCAGCTGGACTCTATTGGCGCCGTCCGCGAGTTGGCTCCATCGCCGTTCTTGACCAAAACCTACATGCTTGTTGAGGATCCGATGACAGACGACGTCATATCGTGGAACTCCGATGGGACGACCTTCATCGTATGGCAGCCACCGGAGTTTGCAATAGATCTCCTACCCACCCTCTTCAAACACAACAACTTCTCAAGCTTTGTTCGCCAACTTAACACCTATGGATTTCGCAAGATTGCAACAAGCAGGTGGGAGTTTTACAATGAGAAGTTTAAAAAGGGATGTAAAGAAAGACTATGCGAAATACACCGAAGAAAAGCATGGACCAACAAGCGAAAACACAATAGTAATGCAAAAGCAATCCAAGTCACACATCAAGATAATCACGATGAAGATCAAAGGTCGTTGTCGACTTCATCGTCTGATGATCAATACACAATGCTTGCTTATGAAAACAAGAAGTTGAAAAAGGAGAATGGAGTATTGAGCTTTGAACTAACAAACATGAAGAAGAAATGCAGAGAGCTTCTTGATTTGGTGGCCAAGTACAAATTCGTGGTTGTTAATGGCAACAAAAAGAAGGCAGATGAGATAATGATGAAGCCAAACTTGAAACTCTTTGGAGTGAAGTTGGAGGTTGAGGAAGAAGATGAAATGGAAATCAAGCAAAACAAGAGGAAGAGATCAAATTATCCAGATAAACCTTTTCTGCTCTCACAAACATGCAAATGA

Protein sequence

MVSLGNVCDQLDSIGAVRELAPSPFLTKTYMLVEDPMTDDVISWNSDGTTFIVWQPPEFAIDLLPTLFKHNNFSSFVRQLNTYGFRKIATSRWEFYNEKFKKGCKERLCEIHRRKAWTNKRKHNSNAKAIQVTHQDNHDEDQRSLSTSSSDDQYTMLAYENKKLKKENGVLSFELTNMKKKCRELLDLVAKYKFVVVNGNKKKADEIMMKPNLKLFGVKLEVEEEDEMEIKQNKRKRSNYPDKPFLLSQTCK

Homology

[Close]

BLAST of CsaV3_3G040700.1 vs. NCBI nr
Match: XP_004136787.1 (PREDICTED: heat stress transcription factor B-3-like [Cucumis sativus] >KGN59494.1 hypothetical protein Csa_3G822450 [Cucumis sativus])

HSP 1 Score: 507.7 bits (1306), Expect = 2.3e-140
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0


Query: 1   MVSLGNVCDQLDSIGAVRELAPSPFLTKTYMLVEDPMTDDVISWNSDGTTFIVWQPPEFA 60
           MVSLGNVCDQLDSIGAVRELAPSPFLTKTYMLVEDPMTDDVISWNSDGTTFIVWQPPEFA
Sbjct: 1   MVSLGNVCDQLDSIGAVRELAPSPFLTKTYMLVEDPMTDDVISWNSDGTTFIVWQPPEFA 60

Query: 61  IDLLPTLFKHNNFSSFVRQLNTYGFRKIATSRWEFYNEKFKKGCKERLCEIHRRKAWTNK 120
           IDLLPTLFKHNNFSSFVRQLNTYGFRKIATSRWEFYNEKFKKGCKERLCEIHRRKAWTNK
Sbjct: 61  IDLLPTLFKHNNFSSFVRQLNTYGFRKIATSRWEFYNEKFKKGCKERLCEIHRRKAWTNK 120

Query: 121 RKHNSNAKAIQVTHQDNHDEDQRSLSTSSSDDQYTMLAYENKKLKKENGVLSFELTNMKK 180
           RKHNSNAKAIQVTHQDNHDEDQRSLSTSSSDDQYTMLAYENKKLKKENGVLSFELTNMKK
Sbjct: 121 RKHNSNAKAIQVTHQDNHDEDQRSLSTSSSDDQYTMLAYENKKLKKENGVLSFELTNMKK 180

Query: 181 KCRELLDLVAKYKFVVVNGNKKKADEIMMKPNLKLFGVKLEVEEEDEMEIKQNKRKRSNY 240
           KCRELLDLVAKYKFVVVNGNKKKADEIMMKPNLKLFGVKLEVEEEDEMEIKQNKRKRSNY
Sbjct: 181 KCRELLDLVAKYKFVVVNGNKKKADEIMMKPNLKLFGVKLEVEEEDEMEIKQNKRKRSNY 240

Query: 241 PDKPFLLSQTCK 253
           PDKPFLLSQTCK
Sbjct: 241 PDKPFLLSQTCK 252

[Close]

BLAST of CsaV3_3G040700.1 vs. NCBI nr
Match: XP_008443318.1 (PREDICTED: heat stress transcription factor B-3-like [Cucumis melo])

HSP 1 Score: 449.1 bits (1154), Expect = 9.7e-123
Identity = 224/252 (88.89%), Postives = 236/252 (93.65%), Query Frame = 0


Query: 1   MVSLGNVCDQLDSIGAVRELAPSPFLTKTYMLVEDPMTDDVISWNSDGTTFIVWQPPEFA 60
           MVSLGNVC+  +SI  V E  PSPFLTKTYMLVEDPMTD+VISWNSDGTTFIVWQPPEFA
Sbjct: 5   MVSLGNVCE--ESIAVVSEPTPSPFLTKTYMLVEDPMTDNVISWNSDGTTFIVWQPPEFA 64

Query: 61  IDLLPTLFKHNNFSSFVRQLNTYGFRKIATSRWEFYNEKFKKGCKERLCEIHRRKAWTNK 120
           IDLLPTLFKHNNFSSFVRQLNTYGFRKIATSRWEFYN+KFKKGCKERLCEI RRKAWTNK
Sbjct: 65  IDLLPTLFKHNNFSSFVRQLNTYGFRKIATSRWEFYNDKFKKGCKERLCEIRRRKAWTNK 124

Query: 121 RKHNSNAKAIQVTHQDNHDEDQRSLSTSSSDDQYTMLAYENKKLKKENGVLSFELTNMKK 180
           RKHNSNAKAIQVTHQDNHDEDQRSLSTSSSDDQYTMLAYENKKLKKENGVLSFELTNMKK
Sbjct: 125 RKHNSNAKAIQVTHQDNHDEDQRSLSTSSSDDQYTMLAYENKKLKKENGVLSFELTNMKK 184

Query: 181 KCRELLDLVAKYKFVVVNGNKKKADEIMMKPNLKLFGVKLEVEEEDEMEIKQNKRKRSNY 240
           KCRELLDLVAKY+F+V+NGN+KK DEIM+KPNLKLFGV+LEVEE      KQNKRKRS +
Sbjct: 185 KCRELLDLVAKYEFMVINGNEKKEDEIMLKPNLKLFGVQLEVEEXXXXXXKQNKRKRSIH 244

Query: 241 PDKPFLLSQTCK 253
           P+KPFLLSQTCK
Sbjct: 245 PNKPFLLSQTCK 254

[Close]

BLAST of CsaV3_3G040700.1 vs. NCBI nr
Match: XP_022973345.1 (heat stress transcription factor B-3-like [Cucurbita maxima])

HSP 1 Score: 303.9 bits (777), Expect = 5.1e-79
Identity = 162/237 (68.35%), Postives = 184/237 (77.64%), Query Frame = 0


Query: 2   VSLGNVCDQLDSIGAVRELAPSPFLTKTYMLVEDPMTDDVISWNSDGTTFIVWQPPEFAI 61
           + LG+VC + +        +P PFL KTY+LVEDP TDDVISWN DGT  +VW P EFA 
Sbjct: 7   IGLGDVCQKPNP-------SPPPFLAKTYLLVEDPTTDDVISWNDDGTALVVWHPLEFAR 66

Query: 62  DLLPTLFKHNNFSSFVRQLNTYGFRKIATSRWEFYNEKFKKGCKERLCEIHRRKAWTNKR 121
           DLLPTLFKH+NFSSFVRQLNTYGFRKI TSRWEFYN+KF+KG KERL EI RRKAW+NK 
Sbjct: 67  DLLPTLFKHSNFSSFVRQLNTYGFRKIVTSRWEFYNDKFQKGGKERLYEICRRKAWSNKP 126

Query: 122 KHNSNAKAIQVTHQDNHDEDQRSLSTSSSDDQYTMLAYENKKLKKENGVLSFELTNMKKK 181
           +H SNAKAIQ THQD  DED+ S    SS D Y  L  ENK+LKKE GVL FEL NMKKK
Sbjct: 127 QHKSNAKAIQATHQDELDEDEWSWLNPSSTDHYVTLVDENKRLKKEKGVLRFELKNMKKK 186

Query: 182 CRELLDLVAKYKFVVVNGNKKKADEIM-MKPNLKLFGVKLEVEEEDEMEIKQNKRKR 238
           CREL+ L+ KY+ + +NG  KK DE+M MKPNLKLFGVKLEV EEDEM ++QNKRKR
Sbjct: 187 CRELIGLIGKYE-LGINGYDKKEDEMMVMKPNLKLFGVKLEVGEEDEM-VRQNKRKR 234

[Close]

BLAST of CsaV3_3G040700.1 vs. NCBI nr
Match: XP_022156836.1 (heat stress transcription factor B-3-like [Momordica charantia])

HSP 1 Score: 282.7 bits (722), Expect = 1.2e-72
Identity = 150/233 (64.38%), Postives = 171/233 (73.39%), Query Frame = 0


Query: 18  RELAPSPFLTKTYMLVEDPMTDDVISWNSDGTTFIVWQPPEFAIDLLPTLFKHNNFSSFV 77
           R+  P PFL KTYMLVEDP TDDVISWN DGT F+VWQPPEFA DLLPTLFKH+NFSSFV
Sbjct: 12  RKSTPPPFLVKTYMLVEDPATDDVISWNDDGTAFVVWQPPEFARDLLPTLFKHSNFSSFV 71

Query: 78  RQLNTYGFRKIATSRWEFYNEKFKKGCKERLCEIHRRKAWTNKRKHNSNAKAIQVTHQDN 137
           RQLNTYGFRK+ATSRWEFYN+KF+KG KE+LCEI RRKAW N R    N   I+ THQ  
Sbjct: 72  RQLNTYGFRKVATSRWEFYNDKFRKGAKEQLCEIRRRKAW-NNRPRRQNTSTIKATHQXX 131

Query: 138 HDEDQRSLSTSSSDDQYTMLAYENKKLKKENGVLSFELTNMKKKCRELLDLVAKYKFVVV 197
                              L  EN +LKKENGVLS ELTNMKKKCRELLDLVAKYK+ + 
Sbjct: 132 XXXXXXXXXXXXXXXXXATLVDENTRLKKENGVLSSELTNMKKKCRELLDLVAKYKYAIN 191

Query: 198 N-GNKKKADEIMMKPNLKLFGVKLEVEEEDEMEIKQNKRKRSNYPDKPFLLSQ 250
           +  ++ + D+ +MKPNLKLFGVKLEV   DEM +++ KRKRS   + P LLSQ
Sbjct: 192 DEDDEHERDQTIMKPNLKLFGVKLEV--GDEMMMREXKRKRSVDQNTPILLSQ 241

[Close]

BLAST of CsaV3_3G040700.1 vs. NCBI nr
Match: XP_023521033.1 (heat stress transcription factor B-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 278.5 bits (711), Expect = 2.3e-71
Identity = 150/237 (63.29%), Postives = 176/237 (74.26%), Query Frame = 0


Query: 2   VSLGNVCDQLDSIGAVRELAPSPFLTKTYMLVEDPMTDDVISWNSDGTTFIVWQPPEFAI 61
           + LG+VC +        + +P PFL KTY+LVEDP TDDVISWN+DGT  +VW PPEFA 
Sbjct: 7   IGLGDVCQK-------PKPSPPPFLAKTYLLVEDPTTDDVISWNNDGTALVVWHPPEFAR 66

Query: 62  DLLPTLFKHNNFSSFVRQLNTYGFRKIATSRWEFYNEKFKKGCKERLCEIHRRKAWTNKR 121
           DLLPTLFKH+NFSSFVRQLNTYGFRKIATSRWEFYN+KF+KG KERL EI R       R
Sbjct: 67  DLLPTLFKHSNFSSFVRQLNTYGFRKIATSRWEFYNDKFQKGGKERLYEIRR-------R 126

Query: 122 KHNSNAKAIQVTHQDNHDEDQRSLSTSSSDDQYTMLAYENKKLKKENGVLSFELTNMKKK 181
           KH SNAKAI+ TH+D+ D            D Y  L  ENK+LKKE G L FE+ NMK+K
Sbjct: 127 KHKSNAKAIEATHRDDLDXXXXXXXXXXXTDHYATLVDENKRLKKEKGALRFEVKNMKRK 186

Query: 182 CRELLDLVAKYKFVVVNGNKKKADEIM-MKPNLKLFGVKLEVEEEDEMEIKQNKRKR 238
           CREL+DL+ KY+ + +NG  KK DE+M MKPNLKLFGVKLEV EEDEM ++Q+KRKR
Sbjct: 187 CRELIDLIGKYE-LGINGYDKKEDEMMVMKPNLKLFGVKLEVGEEDEM-VRQSKRKR 227

[Close]

BLAST of CsaV3_3G040700.1 vs. TAIR10
Match: AT2G41690.1 (heat shock transcription factor B3)

HSP 1 Score: 181.4 bits (459), Expect = 6.9e-46
Identity = 104/209 (49.76%), Postives = 128/209 (61.24%), Query Frame = 0


Query: 22  PSPFLTKTYMLVEDPMTDDVISWNSDGTTFIVWQPPEFAIDLLPTLFKHNNFSSFVRQLN 81
           P PFL KTY +VEDP TD VISWN  GT F+VWQP EFA DLLPTLFKH NFSSFVRQLN
Sbjct: 38  PPPFLVKTYKVVEDPTTDGVISWNEYGTGFVVWQPAEFARDLLPTLFKHCNFSSFVRQLN 97

Query: 82  TYGFRKIATSRWEFYNEKFKKGCKERLCEIHRRKA--WTNKRKHNSNAKAIQVTHQDNHD 141
           TYGFRK+ T RWEF NE F+KG +E +  I RRK+  W++ + ++       + +Q+ H 
Sbjct: 98  TYGFRKVTTIRWEFSNEMFRKGQRELMSNIRRRKSQHWSHNKSNHQVVPTTTMVNQEGHQ 157

Query: 142 E-------DQRSLSTSSSDDQYTMLAYENKKLKKENGVLSFELTNMKKKCRELLDLVAKY 201
                                YT L  ENK LK EN +LS EL   KKKC++L++LV +Y
Sbjct: 158 RIGIDXXXXXXXXXXXXXXFVYTALLDENKCLKNENELLSCELGKTKKKCKQLMELVERY 217

Query: 202 KFVVVNGNKKKADEIMMKPNLKLFGVKLE 222
           +    +   +  DE      LKLFGVKLE
Sbjct: 218 RGEDEDATDESDDE--EDEGLKLFGVKLE 244

[Close]

BLAST of CsaV3_3G040700.1 vs. TAIR10
Match: AT1G46264.1 (heat shock transcription factor B4)

HSP 1 Score: 156.4 bits (394), Expect = 2.4e-38
Identity = 71/94 (75.53%), Postives = 77/94 (81.91%), Query Frame = 0


Query: 22  PSPFLTKTYMLVEDPMTDDVISWNSDGTTFIVWQPPEFAIDLLPTLFKHNNFSSFVRQLN 81
           P+PFLTKTY LV+DP TD V+SW  D TTF+VW+PPEFA DLLP  FKHNNFSSFVRQLN
Sbjct: 32  PAPFLTKTYQLVDDPATDHVVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLN 91

Query: 82  TYGFRKIATSRWEFYNEKFKKGCKERLCEIHRRK 116
           TYGFRKI   RWEF NE FK+G K  LCEIHRRK
Sbjct: 92  TYGFRKIVPDRWEFANEFFKRGEKHLLCEIHRRK 125

[Close]

BLAST of CsaV3_3G040700.1 vs. TAIR10
Match: AT4G11660.1 (winged-helix DNA-binding transcription factor family protein)

HSP 1 Score: 146.4 bits (368), Expect = 2.5e-35
Identity = 68/94 (72.34%), Postives = 77/94 (81.91%), Query Frame = 0


Query: 22  PSPFLTKTYMLVEDPMTDDVISWNSDGTTFIVWQPPEFAIDLLPTLFKHNNFSSFVRQLN 81
           P+PFLTKTY LVEDP+ D++ISWN DGTTFIVW+P EFA DLLP  FKHNNFSSFVRQLN
Sbjct: 57  PTPFLTKTYQLVEDPVYDELISWNEDGTTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLN 116

Query: 82  TYGFRKIATSRWEFYNEKFKKGCKERLCEIHRRK 116
           TYGFRK+   RWEF N+ FK+G K  L +I RRK
Sbjct: 117 TYGFRKVVPDRWEFSNDCFKRGEKILLRDIQRRK 150

[Close]

BLAST of CsaV3_3G040700.1 vs. TAIR10
Match: AT4G17750.1 (heat shock factor 1)

HSP 1 Score: 136.7 bits (343), Expect = 1.9e-32
Identity = 75/162 (46.30%), Postives = 103/162 (63.58%), Query Frame = 0


Query: 22  PSPFLTKTYMLVEDPMTDDVISWNSDGTTFIVWQPPEFAIDLLPTLFKHNNFSSFVRQLN 81
           P PFL+KTY +VEDP TD ++SW+    +FIVW PPEF+ DLLP  FKHNNFSSFVRQLN
Sbjct: 50  PPPFLSKTYDMVEDPATDAIVSWSPTNNSFIVWDPPEFSRDLLPKYFKHNNFSSFVRQLN 109

Query: 82  TYGFRKIATSRWEFYNEKFKKGCKERLCEIHRRKAWTNKRKHNSNAKAIQVTHQDNHDED 141
           TYGFRK+   RWEF NE F +G K  L +I RRK+       +SN ++ Q++      + 
Sbjct: 110 TYGFRKVDPDRWEFANEGFLRGQKHLLKKISRRKSVQGHGSSSSNPQSQQLS------QG 169

Query: 142 QRSLSTSSSDDQYTMLAYEN--KKLKKENGVLSFELTNMKKK 182
           Q S++  SS  +      E   ++LK++  VL  EL  ++++
Sbjct: 170 QGSMAALSSCVEVGKFGLEEEVEQLKRDKNVLMQELVKLRQQ 205

[Close]

BLAST of CsaV3_3G040700.1 vs. TAIR10
Match: AT4G36990.1 (heat shock factor 4)

HSP 1 Score: 133.3 bits (334), Expect = 2.1e-31
Identity = 57/101 (56.44%), Postives = 76/101 (75.25%), Query Frame = 0


Query: 11  LDSIGAVRELAPSPFLTKTYMLVEDPMTDDVISWNSDGTTFIVWQPPEFAIDLLPTLFKH 70
           + ++ A +   P+PFL+KTY LV+D  TDDV+SWN +GT F+VW+  EFA DLLP  FKH
Sbjct: 1   MTAVTAAQRSVPAPFLSKTYQLVDDHSTDDVVSWNEEGTAFVVWKTAEFAKDLLPQYFKH 60

Query: 71  NNFSSFVRQLNTYGFRKIATSRWEFYNEKFKKGCKERLCEI 112
           NNFSSF+RQLNTYGFRK    +WEF N+ F++G ++ L +I
Sbjct: 61  NNFSSFIRQLNTYGFRKTVPDKWEFANDYFRRGGEDLLTDI 101

[Close]

BLAST of CsaV3_3G040700.1 vs. Swiss-Prot
Match: sp|O22230|HSFB3_ARATH (Heat stress transcription factor B-3 OS=Arabidopsis thaliana OX=3702 GN=HSFB3 PE=1 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.2e-44
Identity = 104/209 (49.76%), Postives = 128/209 (61.24%), Query Frame = 0


Query: 22  PSPFLTKTYMLVEDPMTDDVISWNSDGTTFIVWQPPEFAIDLLPTLFKHNNFSSFVRQLN 81
           P PFL KTY +VEDP TD VISWN  GT F+VWQP EFA DLLPTLFKH NFSSFVRQLN
Sbjct: 38  PPPFLVKTYKVVEDPTTDGVISWNEYGTGFVVWQPAEFARDLLPTLFKHCNFSSFVRQLN 97

Query: 82  TYGFRKIATSRWEFYNEKFKKGCKERLCEIHRRKA--WTNKRKHNSNAKAIQVTHQDNHD 141
           TYGFRK+ T RWEF NE F+KG +E +  I RRK+  W++ + ++       + +Q+ H 
Sbjct: 98  TYGFRKVTTIRWEFSNEMFRKGQRELMSNIRRRKSQHWSHNKSNHQVVPTTTMVNQEGHQ 157

Query: 142 E-------DQRSLSTSSSDDQYTMLAYENKKLKKENGVLSFELTNMKKKCRELLDLVAKY 201
                                YT L  ENK LK EN +LS EL   KKKC++L++LV +Y
Sbjct: 158 RIGIDXXXXXXXXXXXXXXFVYTALLDENKCLKNENELLSCELGKTKKKCKQLMELVERY 217

Query: 202 KFVVVNGNKKKADEIMMKPNLKLFGVKLE 222
           +    +   +  DE      LKLFGVKLE
Sbjct: 218 RGEDEDATDESDDE--EDEGLKLFGVKLE 244

[Close]

BLAST of CsaV3_3G040700.1 vs. Swiss-Prot
Match: sp|P22335|HSF24_SOLPE (Heat shock factor protein HSF24 OS=Solanum peruvianum OX=4082 GN=HSF24 PE=2 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 8.3e-41
Identity = 94/185 (50.81%), Postives = 115/185 (62.16%), Query Frame = 0


Query: 21  APSPFLTKTYMLVEDPMTDDVISWNSDGTTFIVWQPPEFAIDLLPTLFKHNNFSSFVRQL 80
           AP+PFL KTY LV+D  TDDVISWN  GTTF+VW+  EFA DLLP  FKHNNFSSFVRQL
Sbjct: 6   APAPFLLKTYQLVDDAATDDVISWNEIGTTFVVWKTAEFAKDLLPKYFKHNNFSSFVRQL 65

Query: 81  NTYGFRKIATSRWEFYNEKFKKGCKERLCEIHRRKAWTNKRKHNSNAKAIQVTHQDN--- 140
           NTYGFRKI   +WEF NE FK+G KE L  I RRK  T+      +  A      DN   
Sbjct: 66  NTYGFRKIVPDKWEFANENFKRGQKELLTAIRRRKTVTSTPAGGKSVAAGASASPDNSXX 125

Query: 141 ----------HDEDQRSLSTSSSDDQYTMLAYENKKLKKENGVLSFELTNMKKKCRELLD 193
                       ++  S+ T     Q+T L+ EN+KLKK+N +LS EL   KK+C EL+ 
Sbjct: 126 XXXXXXXXXPDSKNPGSVDTPGKLSQFTDLSDENEKLKKDNQMLSSELVQAKKQCNELVA 185

[Close]

BLAST of CsaV3_3G040700.1 vs. Swiss-Prot
Match: sp|Q9C635|HSFB4_ARATH (Heat stress transcription factor B-4 OS=Arabidopsis thaliana OX=3702 GN=HSFB4 PE=2 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 4.3e-37
Identity = 71/94 (75.53%), Postives = 77/94 (81.91%), Query Frame = 0


Query: 22  PSPFLTKTYMLVEDPMTDDVISWNSDGTTFIVWQPPEFAIDLLPTLFKHNNFSSFVRQLN 81
           P+PFLTKTY LV+DP TD V+SW  D TTF+VW+PPEFA DLLP  FKHNNFSSFVRQLN
Sbjct: 32  PAPFLTKTYQLVDDPATDHVVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLN 91

Query: 82  TYGFRKIATSRWEFYNEKFKKGCKERLCEIHRRK 116
           TYGFRKI   RWEF NE FK+G K  LCEIHRRK
Sbjct: 92  TYGFRKIVPDRWEFANEFFKRGEKHLLCEIHRRK 125

[Close]

BLAST of CsaV3_3G040700.1 vs. Swiss-Prot
Match: sp|Q652B0|HFB2C_ORYSJ (Heat stress transcription factor B-2c OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB2C PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 9.5e-37
Identity = 70/94 (74.47%), Postives = 78/94 (82.98%), Query Frame = 0


Query: 22  PSPFLTKTYMLVEDPMTDDVISWNSDGTTFIVWQPPEFAIDLLPTLFKHNNFSSFVRQLN 81
           P+PFLTKTY LVEDP  DDVISWN DG+TF+VW+P EFA DLLP  FKHNNFSSFVRQLN
Sbjct: 36  PTPFLTKTYQLVEDPAVDDVISWNEDGSTFVVWRPAEFARDLLPKYFKHNNFSSFVRQLN 95

Query: 82  TYGFRKIATSRWEFYNEKFKKGCKERLCEIHRRK 116
           TYGFRKI   RWEF N+ F++G K  LC+IHRRK
Sbjct: 96  TYGFRKIVPDRWEFANDCFRRGEKRLLCDIHRRK 129

[Close]

BLAST of CsaV3_3G040700.1 vs. Swiss-Prot
Match: sp|Q10KX8|HFB4D_ORYSJ (Heat stress transcription factor B-4d OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB4D PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 9.5e-37
Identity = 70/95 (73.68%), Postives = 77/95 (81.05%), Query Frame = 0


Query: 21  APSPFLTKTYMLVEDPMTDDVISWNSDGTTFIVWQPPEFAIDLLPTLFKHNNFSSFVRQL 80
           AP+PFL+KTY LV+DP TDDV+SW  D  TF+VW+PPEFA DLLP  FKHNNFSSFVRQL
Sbjct: 33  APAPFLSKTYQLVDDPSTDDVVSWGEDEATFVVWRPPEFARDLLPNYFKHNNFSSFVRQL 92

Query: 81  NTYGFRKIATSRWEFYNEKFKKGCKERLCEIHRRK 116
           NTYGFRKI   RWEF NE F+KG K  L EIHRRK
Sbjct: 93  NTYGFRKIVADRWEFANEFFRKGAKHLLSEIHRRK 127

[Close]

BLAST of CsaV3_3G040700.1 vs. TrEMBL
Match: tr|A0A0A0LF37|A0A0A0LF37_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G822450 PE=3 SV=1)

HSP 1 Score: 507.7 bits (1306), Expect = 1.5e-140
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0


Query: 1   MVSLGNVCDQLDSIGAVRELAPSPFLTKTYMLVEDPMTDDVISWNSDGTTFIVWQPPEFA 60
           MVSLGNVCDQLDSIGAVRELAPSPFLTKTYMLVEDPMTDDVISWNSDGTTFIVWQPPEFA
Sbjct: 1   MVSLGNVCDQLDSIGAVRELAPSPFLTKTYMLVEDPMTDDVISWNSDGTTFIVWQPPEFA 60

Query: 61  IDLLPTLFKHNNFSSFVRQLNTYGFRKIATSRWEFYNEKFKKGCKERLCEIHRRKAWTNK 120
           IDLLPTLFKHNNFSSFVRQLNTYGFRKIATSRWEFYNEKFKKGCKERLCEIHRRKAWTNK
Sbjct: 61  IDLLPTLFKHNNFSSFVRQLNTYGFRKIATSRWEFYNEKFKKGCKERLCEIHRRKAWTNK 120

Query: 121 RKHNSNAKAIQVTHQDNHDEDQRSLSTSSSDDQYTMLAYENKKLKKENGVLSFELTNMKK 180
           RKHNSNAKAIQVTHQDNHDEDQRSLSTSSSDDQYTMLAYENKKLKKENGVLSFELTNMKK
Sbjct: 121 RKHNSNAKAIQVTHQDNHDEDQRSLSTSSSDDQYTMLAYENKKLKKENGVLSFELTNMKK 180

Query: 181 KCRELLDLVAKYKFVVVNGNKKKADEIMMKPNLKLFGVKLEVEEEDEMEIKQNKRKRSNY 240
           KCRELLDLVAKYKFVVVNGNKKKADEIMMKPNLKLFGVKLEVEEEDEMEIKQNKRKRSNY
Sbjct: 181 KCRELLDLVAKYKFVVVNGNKKKADEIMMKPNLKLFGVKLEVEEEDEMEIKQNKRKRSNY 240

Query: 241 PDKPFLLSQTCK 253
           PDKPFLLSQTCK
Sbjct: 241 PDKPFLLSQTCK 252

[Close]

BLAST of CsaV3_3G040700.1 vs. TrEMBL
Match: tr|A0A1S3B7P7|A0A1S3B7P7_CUCME (heat stress transcription factor B-3-like OS=Cucumis melo OX=3656 GN=LOC103486932 PE=3 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 6.4e-123
Identity = 224/252 (88.89%), Postives = 236/252 (93.65%), Query Frame = 0


Query: 1   MVSLGNVCDQLDSIGAVRELAPSPFLTKTYMLVEDPMTDDVISWNSDGTTFIVWQPPEFA 60
           MVSLGNVC+  +SI  V E  PSPFLTKTYMLVEDPMTD+VISWNSDGTTFIVWQPPEFA
Sbjct: 5   MVSLGNVCE--ESIAVVSEPTPSPFLTKTYMLVEDPMTDNVISWNSDGTTFIVWQPPEFA 64

Query: 61  IDLLPTLFKHNNFSSFVRQLNTYGFRKIATSRWEFYNEKFKKGCKERLCEIHRRKAWTNK 120
           IDLLPTLFKHNNFSSFVRQLNTYGFRKIATSRWEFYN+KFKKGCKERLCEI RRKAWTNK
Sbjct: 65  IDLLPTLFKHNNFSSFVRQLNTYGFRKIATSRWEFYNDKFKKGCKERLCEIRRRKAWTNK 124

Query: 121 RKHNSNAKAIQVTHQDNHDEDQRSLSTSSSDDQYTMLAYENKKLKKENGVLSFELTNMKK 180
           RKHNSNAKAIQVTHQDNHDEDQRSLSTSSSDDQYTMLAYENKKLKKENGVLSFELTNMKK
Sbjct: 125 RKHNSNAKAIQVTHQDNHDEDQRSLSTSSSDDQYTMLAYENKKLKKENGVLSFELTNMKK 184

Query: 181 KCRELLDLVAKYKFVVVNGNKKKADEIMMKPNLKLFGVKLEVEEEDEMEIKQNKRKRSNY 240
           KCRELLDLVAKY+F+V+NGN+KK DEIM+KPNLKLFGV+LEVEE      KQNKRKRS +
Sbjct: 185 KCRELLDLVAKYEFMVINGNEKKEDEIMLKPNLKLFGVQLEVEEXXXXXXKQNKRKRSIH 244

Query: 241 PDKPFLLSQTCK 253
           P+KPFLLSQTCK
Sbjct: 245 PNKPFLLSQTCK 254

[Close]

BLAST of CsaV3_3G040700.1 vs. TrEMBL
Match: tr|A0A0L9U7H4|A0A0L9U7H4_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan03g213700 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 4.7e-65
Identity = 146/235 (62.13%), Postives = 177/235 (75.32%), Query Frame = 0


Query: 18  RELAPSPFLTKTYMLVEDPMTDDVISWNSDGTTFIVWQPPEFAIDLLPTLFKHNNFSSFV 77
           R+  P PFL KTYMLVEDP TD+V+SWN DGT F+VWQP EFA DLLPT FKH+NFSSFV
Sbjct: 15  RKSTPPPFLLKTYMLVEDPATDNVVSWNVDGTAFVVWQPAEFARDLLPTFFKHSNFSSFV 74

Query: 78  RQLNTYGFRKIATSRWEFYNEKFKKGCKERLCEIHRRKAWTNKRKHNSNAKAIQVTHQDN 137
           RQLNTYGFRK+ATSRWEF+NE+FKKG +E+L EI RRKAW+NK++ N    A QVT  D+
Sbjct: 75  RQLNTYGFRKVATSRWEFFNERFKKGEREQLNEIQRRKAWSNKQQGNG---ANQVTAHDS 134

Query: 138 HDEDQRSLSTSSSDDQYTMLAYENKKLKKENGVLSFELTNMKKKCRELLDLVAKYKFVVV 197
            DEDQRS STSSS   Y+ L  ENK+LKKENGVL++ELT+MK+KC+EL+DLVAKY     
Sbjct: 135 -DEDQRSSSTSSSCG-YSTLVDENKRLKKENGVLNYELTSMKRKCKELVDLVAKYS---S 194

Query: 198 NGNKKKADEIMMKPNLKLFGVKLEVEEEDEMEIKQNKRKRSNYPDKPFLLSQTCK 253
           +  +K+ DE  M     LFGV+LEV  E   EIK+N+ + S       +LSQ+CK
Sbjct: 195 HAQEKEEDERPM-----LFGVRLEV--EGGREIKRNRAEMSE--SASIMLSQSCK 232

[Close]

BLAST of CsaV3_3G040700.1 vs. TrEMBL
Match: tr|A0A0S3RXR4|A0A0S3RXR4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G277300 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 4.7e-65
Identity = 146/235 (62.13%), Postives = 177/235 (75.32%), Query Frame = 0


Query: 18  RELAPSPFLTKTYMLVEDPMTDDVISWNSDGTTFIVWQPPEFAIDLLPTLFKHNNFSSFV 77
           R+  P PFL KTYMLVEDP TD+V+SWN DGT F+VWQP EFA DLLPT FKH+NFSSFV
Sbjct: 15  RKSTPPPFLLKTYMLVEDPATDNVVSWNVDGTAFVVWQPAEFARDLLPTFFKHSNFSSFV 74

Query: 78  RQLNTYGFRKIATSRWEFYNEKFKKGCKERLCEIHRRKAWTNKRKHNSNAKAIQVTHQDN 137
           RQLNTYGFRK+ATSRWEF+NE+FKKG +E+L EI RRKAW+NK++ N    A QVT  D+
Sbjct: 75  RQLNTYGFRKVATSRWEFFNERFKKGEREQLNEIQRRKAWSNKQQGNG---ANQVTAHDS 134

Query: 138 HDEDQRSLSTSSSDDQYTMLAYENKKLKKENGVLSFELTNMKKKCRELLDLVAKYKFVVV 197
            DEDQRS STSSS   Y+ L  ENK+LKKENGVL++ELT+MK+KC+EL+DLVAKY     
Sbjct: 135 -DEDQRSSSTSSSCG-YSTLVDENKRLKKENGVLNYELTSMKRKCKELVDLVAKYS---S 194

Query: 198 NGNKKKADEIMMKPNLKLFGVKLEVEEEDEMEIKQNKRKRSNYPDKPFLLSQTCK 253
           +  +K+ DE  M     LFGV+LEV  E   EIK+N+ + S       +LSQ+CK
Sbjct: 195 HAQEKEEDERPM-----LFGVRLEV--EGGREIKRNRAEMSE--SASIMLSQSCK 232

[Close]

BLAST of CsaV3_3G040700.1 vs. TrEMBL
Match: tr|I1N8Z6|I1N8Z6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100786140 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.0e-64
Identity = 147/235 (62.55%), Postives = 176/235 (74.89%), Query Frame = 0


Query: 18  RELAPSPFLTKTYMLVEDPMTDDVISWNSDGTTFIVWQPPEFAIDLLPTLFKHNNFSSFV 77
           R+  P PFL KTYMLVEDP TDDVISWN+ GT F+VWQPPEFA DLLPTLFKH+NFSSFV
Sbjct: 14  RKCTPPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFV 73

Query: 78  RQLNTYGFRKIATSRWEFYNEKFKKGCKERLCEIHRRKAWTNKRKHNSNAKAIQVTHQDN 137
           RQLNTYGFRK+ATSRWEF+N+KFKKG +E L EI RRKAW++K++ N+     Q T QD+
Sbjct: 74  RQLNTYGFRKVATSRWEFFNDKFKKGERELLHEIRRRKAWSSKQQPNA---PNQGTPQDS 133

Query: 138 HDEDQRSLSTSSSDDQYTMLAYENKKLKKENGVLSFELTNMKKKCRELLDLVAKYKFVVV 197
            DEDQRS STSSS   YT L  ENK+LKKENGVL+ ELT+MK+KC+ELLDLVA Y     
Sbjct: 134 -DEDQRSSSTSSSFG-YTTLVDENKRLKKENGVLNSELTSMKRKCKELLDLVATYS---S 193

Query: 198 NGNKKKADEIMMKPNLKLFGVKLEVEEEDEMEIKQNKRKRSNYPDKPFLLSQTCK 253
           +  ++K DE  M     LFGV+LEV+   EM  K+N+ + S       +LSQ+CK
Sbjct: 194 HAKEEKKDERPM-----LFGVRLEVQGGREM--KRNRAEMSE--STSIMLSQSCK 231

The following BLAST results are available for this feature:

BLAST of CsaV3_3G040700.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136787.1	2.3e-140	100.00	PREDICTED: heat stress transcription factor B-3-like [Cucumis sativus] >KGN59494...	[more]
XP_008443318.1	9.7e-123	88.89	PREDICTED: heat stress transcription factor B-3-like [Cucumis melo]	[more]
XP_022973345.1	5.1e-79	68.35	heat stress transcription factor B-3-like [Cucurbita maxima]	[more]
XP_022156836.1	1.2e-72	64.38	heat stress transcription factor B-3-like [Momordica charantia]	[more]
XP_023521033.1	2.3e-71	63.29	heat stress transcription factor B-3-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_3G040700.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G41690.1	6.9e-46	49.76	heat shock transcription factor B3	[more]
AT1G46264.1	2.4e-38	75.53	heat shock transcription factor B4	[more]
AT4G11660.1	2.5e-35	72.34	winged-helix DNA-binding transcription factor family protein	[more]
AT4G17750.1	1.9e-32	46.30	heat shock factor 1	[more]
AT4G36990.1	2.1e-31	56.44	heat shock factor 4	[more]

BLAST of CsaV3_3G040700.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O22230\|HSFB3_ARATH	1.2e-44	49.76	Heat stress transcription factor B-3 OS=Arabidopsis thaliana OX=3702 GN=HSFB3 PE...	[more]
sp\|P22335\|HSF24_SOLPE	8.3e-41	50.81	Heat shock factor protein HSF24 OS=Solanum peruvianum OX=4082 GN=HSF24 PE=2 SV=1	[more]
sp\|Q9C635\|HSFB4_ARATH	4.3e-37	75.53	Heat stress transcription factor B-4 OS=Arabidopsis thaliana OX=3702 GN=HSFB4 PE...	[more]
sp\|Q652B0\|HFB2C_ORYSJ	9.5e-37	74.47	Heat stress transcription factor B-2c OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
sp\|Q10KX8\|HFB4D_ORYSJ	9.5e-37	73.68	Heat stress transcription factor B-4d OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of CsaV3_3G040700.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LF37\|A0A0A0LF37_CUCSA	1.5e-140	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G822450 PE=3 SV=1	[more]
tr\|A0A1S3B7P7\|A0A1S3B7P7_CUCME	6.4e-123	88.89	heat stress transcription factor B-3-like OS=Cucumis melo OX=3656 GN=LOC10348693...	[more]
tr\|A0A0L9U7H4\|A0A0L9U7H4_PHAAN	4.7e-65	62.13	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan03g213700 PE...	[more]
tr\|A0A0S3RXR4\|A0A0S3RXR4_PHAAN	4.7e-65	62.13	Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G...	[more]
tr\|I1N8Z6\|I1N8Z6_SOYBN	4.0e-64	62.55	Uncharacterized protein OS=Glycine max OX=3847 GN=100786140 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0043565	sequence-specific DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR036390	WH_DNA-bd_sf
IPR027725	HSF_fam
IPR036388	WH-like_DNA-bd_sf
IPR000232	HSF_DNA-bd

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_3G040700	CsaV3_3G040700	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G040700.1.cds2	CsaV3_3G040700.1.cds2	CDS
CsaV3_3G040700.1.cds1	CsaV3_3G040700.1.cds1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G040700.1.exon2	CsaV3_3G040700.1.exon2	exon
CsaV3_3G040700.1.exon1	CsaV3_3G040700.1.exon1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G040700.1	CsaV3_3G040700.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PRINTS	PR00056	HSFDOMAIN	coord: 25..48 score: 49.05 coord: 76..88 score: 84.62 coord: 63..75 score: 72.75
IPR000232	Heat shock factor (HSF)-type, DNA-binding	SMART	SM00415	hsfneu3	coord: 21..114 e-value: 1.9E-50 score: 183.6
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PFAM	PF00447	HSF_DNA-bind	coord: 25..114 e-value: 1.0E-28 score: 99.6
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PROSITE	PS00434	HSF_DOMAIN	coord: 64..88
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	G3DSA:1.10.10.10		coord: 18..116 e-value: 2.0E-35 score: 123.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..252
None	No IPR available	PANTHER	PTHR10015:SF168	HEAT STRESS TRANSCRIPTION FACTOR B-2A	coord: 20..202
IPR027725	Heat shock transcription factor family	PANTHER	PTHR10015	HEAT SHOCK TRANSCRIPTION FACTOR	coord: 20..202
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	SSF46785	"Winged helix" DNA-binding domain	coord: 22..114