Lsi03G015580 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCAACCATTCCTTTCTTTCCTTTTCCCTTTGTAAAGAGAAAGAGGAAAAAAGGGGCTTGCATTTCTCATGAACTGTGGAGTTGTGTTGGGTTTCTATTGTTGGGGTTGGGAGTTCTTAACTGCCCTTCTTCTCTTCTCCTCCTAATTAAACTTCTAAATCCTTCTCATTATATTCTCTTTTATTTATATATAAATATATATTCGTTCTTGTGTTTCTAGAGGCTATTTTTCTCATGGAAGAGGCAACAGTAGGCCTAGGTAATGTGTGTGAGAAGGAGTATGTCGGTGCCGCCCGAAAGCCGAGTACTCCGCCCCCGTTCTTGGCCAAAACCTACATGCTTGTTGAGGATCCAACGACGGACGACGTCATATCGTGGAATTACGATGGAACAACGTTCGTCGTGTGGCGGCCACCGGAGTTCGCAACAGATCTCCTCCCAACCCTCTTCAAACACAACAACTTCTCTAGCTTTGTTCGCCAACTTAACACATATGTAAGTTGATTATTGTCGAGTTTATACATGTAATTTCACTCTATTCCATTTCTCAACTCTCATTTTCATATTTATTTCAATTTGTTTTGATGACGATTTATTTTAATCTTTTTGCAAAATTATATGCTGGTTTATTTTTCTTAAATTTTTAGGGCTCTTTTCATATATAGAAAAATGAGTCAAACTATTTATAAATGTAGAAAAAAAAAATTGTGTATCAGCAATAAATCGCAATAAAATTCCTCACTTGAGCGATAGATTGCGATAAAAGTTTAAGCGATAGAATCTTATCCCGGTCAATCACTGATAGACAGTAAAAAATTTCTATATTTATAAATAGTTTGATATTTTTTCTATTTACAATAATTTCCCAAATTTTTATCTAGATTACAAATTACTTTTGAAATTATAAAAAATATCAAAAAGACCTTAAAAAAAATCACTCAAAATTTTTTTGCACATCAGATTTGAAAAGTGAGAAAAGAATTTAGGTATAGGCAGATATTACAAACTTTAATTTAACTTGAGGGAACAAAATTGTTAATTTTAACTATGATTAAAAAAATCTTTTTTATGGTCAAAAAGCGTTTTCCACTCCAAATAATTATGTTTGACTATAACTTTTTTAAATTATTGTCAAACATTTTTCAAAATTATGCAACATTTTTCAAAATTAGATATGAAGATAGTTCAACAATAATGACATTACAACCCATCTCCAATGTATATAAAAGATTGAAATGTTTTGAGTTTCTACCCACTACTTGTAATACTATATTCTAAAATGAATAAAGAGGAAAAGTCTAAGATATATTTAAAAAAGCTTTCTAAAAAAATAATATATATATATATATAAAAGAAAAAATAAAAAACAATAAGCAATAATCTGTGATTTTAGTGCTAGTATATTGACCAAAACAACTTTTTTTTTTTTTTAATTTTGATTTTTATTGGTCAAAATAGTTCAATGTTGATCTCTCATGAATTTTTGTTTATAATTAATTAAATCTCTCCACATACTTCTTCTCACCCACTTTTCTTTTTAACTTCTCTCTACCACATGCTTTTCACTAATTTCTAAATTCACACACTTTCATTACTTTTTTTTTTCTAGTTTGGTTGATCTAAATAAAAAGATAACCTTCAAATTAATCTAGATTTTTTAAAATATTTTTTATTAATTATTTATTTTAAAAAAAGAGAATTTTTAAAAATAGAAAAATAAGAAAAATTATTTACACAAAATAGCAAAATTTTTAGATAGATGTGATAGACGGTGATAGAAGTCTATCAGGGTCTATAAGTGATAGAAATAATAGAAGTCTATCACTGATATATGCTGATGGAAGTCTATCAATGTCTATCAATATTTTTTTACTATTTTTTGTAAATAATTTGACAATTTTTTTATCTGTGAAAATTTTCCTTTAAAAAAATACTTTTGACGATATAAATCATTCAATAAACTATACCGAACACAATAATTATGTATTGATATTATTTCAAATACATTTTTTCACAAGTTACTCTAAACATACTACTATACTACTTATTATATTATGTATTTGTGTTGATTTTTTTTTTCAATCCAAGTCAATGACGGTCAAATCATAAGATTGTGCAAAACATGATCTAAAAAATCGCTTAAAGTACACTATAATACATTTTTCAAATTTCAAATAAAATGTTGAGTCTGGAAATCTGAATTCGGTTTTATGTTTTTAGATTCACTAAGTTAAATGAATATGCATTTGGTAGGTAATATAATCTTATTTCTTAAAACAATTTTCAAATTATGTGATATTTATCAACATTAGTTTAAGAGAAAATAGAATCACATAGGTTCAAACAACATTACTTGTGCTAAATGTAAGTTTTTGAGTTTAGTGGTAAATTTCACATGGCATGAAAATTAATAACCAATCTTGCTGTGCCTAGTGTAACAAGTGTTCCATAACGATCGAACTCTCGCGCTCACTTATTGTGCATAGTGCCAATTTTTTAGAGTTCATAGACGTAGAAGATGTTGAAACATTTCGATATAAGATTAAATTTATTGTCACTTATTAGGTTAACTAAGTTTTTAAATTTTTGAGTTCAGTAGTGATTAGTTTGATGTTATACCTTGTGTGCAATGAAACTTCGATAGGGATTTCGCAAGATTGCAACAAGCAGATGGGAGTTTTACAATGACAAGTTTCAAAAGGGATGTAAAGAAAGACTATGCGAGATACGAAGGAGAAAAGCATGGAACAACAAGCGACAACGTAATAATAATACAAAAGCAATCCAAGCCACACATCAAGACGATCGCGATGAAGATCGACGGTCGTCGTCGATTACATCATCGTCCGATGATCAATACATGACGCTCGTTGATGAAAACAAGAGGTTGAAGAAGGAGAATGGAGTGTTGAGCTTTGAGCTAACAAACATGAAGAAGAAATGCAGAGAGCTTCTTGATTTGGTGGCTAAGTACGAATTCGACGTCATTAATGGCAACGAGGAGAAGGAAGATGAGATAATGATAAAGCCAAACTTGAAACTGTTTGGAGTCAAGTTGGAGGTTGAGGAAGAAGATGAAATGGTGATAAGGCAAAACAAGAGGAAGAGATCAATTTATCAAAATAAACCTTTTCTTCTTCACAATCATGCAAATGAAATTGCTTCCATCAAACTTTAAGTTGAAAGTATTGATCTATTGCGATTTTTGTTTTTAGTTTCATGTTTTTGGATTCTATTTTTAGTTTTCTGTTTGTAAAAAAGTATACTCGATCGTACACATTATAATTTCATTTCCTCATTTTGTAATGTCAAAATGCTAATTAGTGTAATTTTAT TGCAACCATTCCTTTCTTTCCTTTTCCCTTTGTAAAGAGAAAGAGGAAAAAAGGGGCTTGCATTTCTCATGAACTGTGGAGTTGTGTTGGGTTTCTATTGTTGGGAGGCTATTTTTCTCATGGAAGAGGCAACAGTAGGCCTAGGTAATGTGTGTGAGAAGGAGTATGTCGGTGCCGCCCGAAAGCCGAGTACTCCGCCCCCGTTCTTGGCCAAAACCTACATGCTTGTTGAGGATCCAACGACGGACGACGTCATATCGTGGAATTACGATGGAACAACGTTCGTCGTGTGGCGGCCACCGGAGTTCGCAACAGATCTCCTCCCAACCCTCTTCAAACACAACAACTTCTCTAGCTTTGTTCGCCAACTTAACACATATGGATTTCGCAAGATTGCAACAAGCAGATGGGAGTTTTACAATGACAAGTTTCAAAAGGGATGTAAAGAAAGACTATGCGAGATACGAAGGAGAAAAGCATGGAACAACAAGCGACAACGTAATAATAATACAAAAGCAATCCAAGCCACACATCAAGACGATCGCGATGAAGATCGACGGTCGTCGTCGATTACATCATCGTCCGATGATCAATACATGACGCTCGTTGATGAAAACAAGAGGTTGAAGAAGGAGAATGGAGTGTTGAGCTTTGAGCTAACAAACATGAAGAAGAAATGCAGAGAGCTTCTTGATTTGGTGGCTAAGTACGAATTCGACGTCATTAATGGCAACGAGGAGAAGGAAGATGAGATAATGATAAAGCCAAACTTGAAACTGTTTGGAGTCAAGTTGGAGGTTGAGGAAGAAGATGAAATGGTGATAAGGCAAAACAAGAGGAAGAGATCAATTTATCAAAATAAACCTTTTCTTCTTCACAATCATGCAAATGAAATTGCTTCCATCAAACTTTAAGTTGAAAGTATTGATCTATTGCGATTTTTGTTTTTAGTTTCATGTTTTTGGATTCTATTTTTAGTTTTCTGTTTGTAAAAAAGTATACTCGATCGTACACATTATAATTTCATTTCCTCATTTTGTAATGTCAAAATGCTAATTAGTGTAATTTTAT ATGAACTGTGGAGTTGTGTTGGGTTTCTATTGTTGGGAGGCTATTTTTCTCATGGAAGAGGCAACAGTAGGCCTAGGTAATGTGTGTGAGAAGGAGTATGTCGGTGCCGCCCGAAAGCCGAGTACTCCGCCCCCGTTCTTGGCCAAAACCTACATGCTTGTTGAGGATCCAACGACGGACGACGTCATATCGTGGAATTACGATGGAACAACGTTCGTCGTGTGGCGGCCACCGGAGTTCGCAACAGATCTCCTCCCAACCCTCTTCAAACACAACAACTTCTCTAGCTTTGTTCGCCAACTTAACACATATGGATTTCGCAAGATTGCAACAAGCAGATGGGAGTTTTACAATGACAAGTTTCAAAAGGGATGTAAAGAAAGACTATGCGAGATACGAAGGAGAAAAGCATGGAACAACAAGCGACAACGTAATAATAATACAAAAGCAATCCAAGCCACACATCAAGACGATCGCGATGAAGATCGACGGTCGTCGTCGATTACATCATCGTCCGATGATCAATACATGACGCTCGTTGATGAAAACAAGAGGTTGAAGAAGGAGAATGGAGTGTTGAGCTTTGAGCTAACAAACATGAAGAAGAAATGCAGAGAGCTTCTTGATTTGGTGGCTAAGTACGAATTCGACGTCATTAATGGCAACGAGGAGAAGGAAGATGAGATAATGATAAAGCCAAACTTGAAACTGTTTGGAGTCAAGTTGGAGGTTGAGGAAGAAGATGAAATGGTGATAAGGCAAAACAAGAGGAAGAGATCAATTTATCAAAATAAACCTTTTCTTCTTCACAATCATGCAAATGAAATTGCTTCCATCAAACTTTAA MNCGVVLGFYCWEAIFLMEEATVGLGNVCEKEYVGAARKPSTPPPFLAKTYMLVEDPTTDDVISWNYDGTTFVVWRPPEFATDLLPTLFKHNNFSSFVRQLNTYGFRKIATSRWEFYNDKFQKGCKERLCEIRRRKAWNNKRQRNNNTKAIQATHQDDRDEDRRSSSITSSSDDQYMTLVDENKRLKKENGVLSFELTNMKKKCRELLDLVAKYEFDVINGNEEKEDEIMIKPNLKLFGVKLEVEEEDEMVIRQNKRKRSIYQNKPFLLHNHANEIASIKL
BLAST of Lsi03G015580 vs. Swiss-Prot
Match: HSFB3_ARATH (Heat stress transcription factor B-3 OS=Arabidopsis thaliana GN=HSFB3 PE=2 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 1.7e-50 Identity = 116/211 (54.98%), Postives = 143/211 (67.77%), Query Frame = 1
BLAST of Lsi03G015580 vs. Swiss-Prot
Match: HSF24_SOLPE (Heat shock factor protein HSF24 OS=Solanum peruvianum GN=HSF24 PE=2 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 1.6e-40 Identity = 96/187 (51.34%), Postives = 118/187 (63.10%), Query Frame = 1
BLAST of Lsi03G015580 vs. Swiss-Prot
Match: HFB2B_ORYSJ (Heat stress transcription factor B-2b OS=Oryza sativa subsp. japonica GN=HSFB2B PE=2 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 3.2e-38 Identity = 100/210 (47.62%), Postives = 119/210 (56.67%), Query Frame = 1
BLAST of Lsi03G015580 vs. Swiss-Prot
Match: HFB4B_ORYSJ (Heat stress transcription factor B-4b OS=Oryza sativa subsp. japonica GN=HSFB4B PE=1 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.4e-36 Identity = 77/127 (60.63%), Postives = 84/127 (66.14%), Query Frame = 1
BLAST of Lsi03G015580 vs. Swiss-Prot
Match: HFB2C_ORYSJ (Heat stress transcription factor B-2c OS=Oryza sativa subsp. japonica GN=HSFB2C PE=2 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 2.3e-36 Identity = 73/100 (73.00%), Postives = 78/100 (78.00%), Query Frame = 1
BLAST of Lsi03G015580 vs. TrEMBL
Match: A0A0A0LF37_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G822450 PE=3 SV=1) HSP 1 Score: 388.7 bits (997), Expect = 6.2e-105 Identity = 198/248 (79.84%), Postives = 220/248 (88.71%), Query Frame = 1
BLAST of Lsi03G015580 vs. TrEMBL
Match: A0A061F3V0_THECC (Heat shock factor protein, putative OS=Theobroma cacao GN=TCM_024565 PE=3 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 3.9e-67 Identity = 150/223 (67.26%), Postives = 174/223 (78.03%), Query Frame = 1
BLAST of Lsi03G015580 vs. TrEMBL
Match: A0A0B2PIE3_GLYSO (Heat stress transcription factor B-3 OS=Glycine soja GN=glysoja_012661 PE=3 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 1.1e-66 Identity = 144/209 (68.90%), Postives = 166/209 (79.43%), Query Frame = 1
BLAST of Lsi03G015580 vs. TrEMBL
Match: A0A067K1D9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21103 PE=3 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 1.1e-66 Identity = 151/231 (65.37%), Postives = 174/231 (75.32%), Query Frame = 1
BLAST of Lsi03G015580 vs. TrEMBL
Match: I1JNB9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G135800 PE=3 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 1.1e-66 Identity = 144/209 (68.90%), Postives = 166/209 (79.43%), Query Frame = 1
BLAST of Lsi03G015580 vs. TAIR10
Match: AT2G41690.1 (AT2G41690.1 heat shock transcription factor B3) HSP 1 Score: 201.1 bits (510), Expect = 9.3e-52 Identity = 116/211 (54.98%), Postives = 143/211 (67.77%), Query Frame = 1
BLAST of Lsi03G015580 vs. TAIR10
Match: AT5G62020.1 (AT5G62020.1 heat shock transcription factor B2A) HSP 1 Score: 151.4 bits (381), Expect = 8.5e-37 Identity = 85/195 (43.59%), Postives = 117/195 (60.00%), Query Frame = 1
BLAST of Lsi03G015580 vs. TAIR10
Match: AT1G46264.1 (AT1G46264.1 heat shock transcription factor B4) HSP 1 Score: 149.8 bits (377), Expect = 2.5e-36 Identity = 69/96 (71.88%), Postives = 75/96 (78.12%), Query Frame = 1
BLAST of Lsi03G015580 vs. TAIR10
Match: AT4G36990.1 (AT4G36990.1 heat shock factor 4) HSP 1 Score: 148.3 bits (373), Expect = 7.2e-36 Identity = 98/243 (40.33%), Postives = 131/243 (53.91%), Query Frame = 1
BLAST of Lsi03G015580 vs. TAIR10
Match: AT4G11660.1 (AT4G11660.1 winged-helix DNA-binding transcription factor family protein) HSP 1 Score: 146.7 bits (369), Expect = 2.1e-35 Identity = 69/102 (67.65%), Postives = 78/102 (76.47%), Query Frame = 1
BLAST of Lsi03G015580 vs. NCBI nr
Match: gi|659085244|ref|XP_008443318.1| (PREDICTED: heat stress transcription factor B-3-like [Cucumis melo]) HSP 1 Score: 403.3 bits (1035), Expect = 3.5e-109 Identity = 207/252 (82.14%), Postives = 223/252 (88.49%), Query Frame = 1
BLAST of Lsi03G015580 vs. NCBI nr
Match: gi|449438018|ref|XP_004136787.1| (PREDICTED: heat stress transcription factor B-3-like [Cucumis sativus]) HSP 1 Score: 388.7 bits (997), Expect = 8.9e-105 Identity = 198/248 (79.84%), Postives = 220/248 (88.71%), Query Frame = 1
BLAST of Lsi03G015580 vs. NCBI nr
Match: gi|645278471|ref|XP_008244246.1| (PREDICTED: heat stress transcription factor B-3 [Prunus mume]) HSP 1 Score: 267.3 bits (682), Expect = 3.0e-68 Identity = 154/250 (61.60%), Postives = 186/250 (74.40%), Query Frame = 1
BLAST of Lsi03G015580 vs. NCBI nr
Match: gi|590635576|ref|XP_007028662.1| (Heat shock factor protein, putative [Theobroma cacao]) HSP 1 Score: 263.1 bits (671), Expect = 5.7e-67 Identity = 150/223 (67.26%), Postives = 174/223 (78.03%), Query Frame = 1
BLAST of Lsi03G015580 vs. NCBI nr
Match: gi|950950860|ref|XP_014495495.1| (PREDICTED: heat stress transcription factor B-3-like isoform X2 [Vigna radiata var. radiata]) HSP 1 Score: 261.9 bits (668), Expect = 1.3e-66 Identity = 150/260 (57.69%), Postives = 180/260 (69.23%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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