CsaV3_2G033240 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGACGAGTTCCACGATTGGGAGCTTCTCCATGAGTATGACCCCACTTTCCCCCAACCCTACTCTTCCAATCTTCCCTATTCGAACTCGACGTTTTCGAAGGAATTTGAAGGCGATTCGGGCACCGAAAGCACAATCTGTTTGGATTACTTCTCTCTTCGTAATCACGAATCGAGTCCAAAAACTCCCCTGAAGTTTACTGTAACTAATGGGTGTTTGGTCGAGATAGAAAACCTCAGCTCCGTTGATTCTGGTTCGGAGATTCGGAGTTGTCGTAAGAATACGAGTGAATTTGGGTCTGACTTGGGAGACGACCTTTTGGGCGAATGTGAATTGAACCAATCTCACGAGAACGGTCCTTTAGGTATTACGAAAAGCGTAGCTGGGTTCGAAGAAATTTCAATCGAGGACGAGAATTTGGATAGACGGGAGACCGATGATGGTGAATTGAAAGGCTCTCCTCTTGTTGCCAGAGATGAACTGCTTCGTGTGAAGGACACGTATGACCCGACGGAATCCGAAGAACCTAGAGAAGAAAGTGAGAGCCAAGATGAGATTTTGGACGACACTTATTCTAATTGGAGTGGAAACGAGTCATTTGCAATGAAATCTGGAGACGATGGAAAAGAGAACGATGCAGGCAGCGATCATATAGAGAGTGTAAATGATATTTCGAACAATGAAGATGAAGATTCGAGTGAGAAAATAGATGTGGCAATGGCGGTAGAAGAAGTGAAAGTTGAGGCAAAATCTGGTGAGTTAGAGGCACAGAGGACGAAAGCTGTGTGGTGGAAGGTTCCTTTTCAGGTTTTGAGGTATTGCTTTTTAAGGGCTAGCCCTGCATGGTCCTTTTCTGTGGCTGCTGCTTTCATGGGAATGATGATATTGGGACGTAAATTGTACAAGATGAAGAGGAAAGCTAAAAGCCTTCACTCGAAGATTGCGGTGAATGATAAGGTTAGTTATTGCGTCTTTCGATTACCATATTTTTGTCATCCTTGGGAGAACTTCTTTCGTTTAATACCCCTTTTGGAAGTAAGCAACGTAGTTTTGAATCAATCGGTGTTAAACATATTTGGAGATCCAGTTCAATTCCAAGCAACCTCATTTGTTTTATGGGATGTGGTTCTTGTGATTGAGATGGTGTTTTTCTAAGCTTGTGATTGTTTCAATAGAATAACTCTCCTCTCAATGCAATTTCTTTGATTGACATTGGAGCACCTGTGATCCATCATAAATCCTCTCTTTTAATTGTGCTTTTTGTGTTGAAATTGATGTGCACTATCTTCTGGATTGCACAGGCAAGTGCCACCCTTGTATCATTATGCAGCTCTTTCCATTATTCACATCAAACAAATAATTAAAATATTTTATAAAAGAAATAAGAAATTTTCAACATGGCACAATTTTATGAACAATGTGGTAAGATGCACAAAGATGATGGACTTGTAGAAACTAACCAAAATTTGTTGTTTACTTCTGGAACTACCTTATTTTCATTATTTGTGGCTAAAGAAGCCCTGTAGCCAGTGCCAAGAAACTTGATTCCTTTAGTAGTGCCATTATACGTTTTTTCCTACCTTTGTTAGAACATTTGGAAAAGGAACTTCAGATGATTTAATGCCTAAACACGAGGGGCATATAGAATCAAACCCTTCTGGTTTGTTTATATTTGTAGTTAGGGTTAGACTTATACACGTCTCGACTTAACTCACGGGAAAGCTTTATCTAACCCTATAATATTTAGGTGTAAAGAAAACTCGTTAGGTAGGTGACCAACATGGGTTTAAAGACATTCCTTCCTATACCCATGTTCTTTATCTACCATAAGCCAATTCGCGATGATTGAGATGACGAAAATAAATTTGAAAGCATAGTAGAACCCATTAAAACTTTTAAAGACTGAGATGCAGTTGGATTATCGAATGAAATCTTGTTAGTGGGTCAATTAGCCTGGGTTAGAACTAGAAGCTTTCAAGCCTACCTATAGGCTTATTGACTTTTGTGATGTATAACTTTCTCATTACGAGGGAAAAATGAGGCTTTGTCCCCCTTCCCATATGCATACAAATTCATTTCATACTCTGGAAAACTTGATTGAATGATGGCAAAAACTTAATACTGGTACACAAATTTTTGTAGAGGGTATCACACTTTGCAGATCGGGCTGCACGTTTGAATGAGGCCTTTTCGGTGGTGAGACGGGTGCCTGTGGTGAGAGGTCCATTGACAGGTGGAGGTGCAAATTCTTGGCCTGCCATGAGTATGAGATGA ATGGACGACGAGTTCCACGATTGGGAGCTTCTCCATGAGTATGACCCCACTTTCCCCCAACCCTACTCTTCCAATCTTCCCTATTCGAACTCGACGTTTTCGAAGGAATTTGAAGGCGATTCGGGCACCGAAAGCACAATCTGTTTGGATTACTTCTCTCTTCGTAATCACGAATCGAGTCCAAAAACTCCCCTGAAGTTTACTGTAACTAATGGGTGTTTGGTCGAGATAGAAAACCTCAGCTCCGTTGATTCTGGTTCGGAGATTCGGAGTTGTCGTAAGAATACGAGTGAATTTGGGTCTGACTTGGGAGACGACCTTTTGGGCGAATGTGAATTGAACCAATCTCACGAGAACGGTCCTTTAGGTATTACGAAAAGCGTAGCTGGGTTCGAAGAAATTTCAATCGAGGACGAGAATTTGGATAGACGGGAGACCGATGATGGTGAATTGAAAGGCTCTCCTCTTGTTGCCAGAGATGAACTGCTTCGTGTGAAGGACACGTATGACCCGACGGAATCCGAAGAACCTAGAGAAGAAAGTGAGAGCCAAGATGAGATTTTGGACGACACTTATTCTAATTGGAGTGGAAACGAGTCATTTGCAATGAAATCTGGAGACGATGGAAAAGAGAACGATGCAGGCAGCGATCATATAGAGAGTGTAAATGATATTTCGAACAATGAAGATGAAGATTCGAGTGAGAAAATAGATGTGGCAATGGCGGTAGAAGAAGTGAAAGTTGAGGCAAAATCTGGTGAGTTAGAGGCACAGAGGACGAAAGCTGTGTGGTGGAAGGTTCCTTTTCAGGTTTTGAGGTATTGCTTTTTAAGGGCTAGCCCTGCATGGTCCTTTTCTGTGGCTGCTGCTTTCATGGGAATGATGATATTGGGACGTAAATTGTACAAGATGAAGAGGAAAGCTAAAAGCCTTCACTCGAAGATTGCGGTGAATGATAAGAGGGTATCACACTTTGCAGATCGGGCTGCACGTTTGAATGAGGCCTTTTCGGTGGTGAGACGGGTGCCTGTGGTGAGAGGTCCATTGACAGGTGGAGGTGCAAATTCTTGGCCTGCCATGAGTATGAGATGA ATGGACGACGAGTTCCACGATTGGGAGCTTCTCCATGAGTATGACCCCACTTTCCCCCAACCCTACTCTTCCAATCTTCCCTATTCGAACTCGACGTTTTCGAAGGAATTTGAAGGCGATTCGGGCACCGAAAGCACAATCTGTTTGGATTACTTCTCTCTTCGTAATCACGAATCGAGTCCAAAAACTCCCCTGAAGTTTACTGTAACTAATGGGTGTTTGGTCGAGATAGAAAACCTCAGCTCCGTTGATTCTGGTTCGGAGATTCGGAGTTGTCGTAAGAATACGAGTGAATTTGGGTCTGACTTGGGAGACGACCTTTTGGGCGAATGTGAATTGAACCAATCTCACGAGAACGGTCCTTTAGGTATTACGAAAAGCGTAGCTGGGTTCGAAGAAATTTCAATCGAGGACGAGAATTTGGATAGACGGGAGACCGATGATGGTGAATTGAAAGGCTCTCCTCTTGTTGCCAGAGATGAACTGCTTCGTGTGAAGGACACGTATGACCCGACGGAATCCGAAGAACCTAGAGAAGAAAGTGAGAGCCAAGATGAGATTTTGGACGACACTTATTCTAATTGGAGTGGAAACGAGTCATTTGCAATGAAATCTGGAGACGATGGAAAAGAGAACGATGCAGGCAGCGATCATATAGAGAGTGTAAATGATATTTCGAACAATGAAGATGAAGATTCGAGTGAGAAAATAGATGTGGCAATGGCGGTAGAAGAAGTGAAAGTTGAGGCAAAATCTGGTGAGTTAGAGGCACAGAGGACGAAAGCTGTGTGGTGGAAGGTTCCTTTTCAGGTTTTGAGGTATTGCTTTTTAAGGGCTAGCCCTGCATGGTCCTTTTCTGTGGCTGCTGCTTTCATGGGAATGATGATATTGGGACGTAAATTGTACAAGATGAAGAGGAAAGCTAAAAGCCTTCACTCGAAGATTGCGGTGAATGATAAGAGGGTATCACACTTTGCAGATCGGGCTGCACGTTTGAATGAGGCCTTTTCGGTGGTGAGACGGGTGCCTGTGGTGAGAGGTCCATTGACAGGTGGAGGTGCAAATTCTTGGCCTGCCATGAGTATGAGATGA MDDEFHDWELLHEYDPTFPQPYSSNLPYSNSTFSKEFEGDSGTESTICLDYFSLRNHESSPKTPLKFTVTNGCLVEIENLSSVDSGSEIRSCRKNTSEFGSDLGDDLLGECELNQSHENGPLGITKSVAGFEEISIEDENLDRRETDDGELKGSPLVARDELLRVKDTYDPTESEEPREESESQDEILDDTYSNWSGNESFAMKSGDDGKENDAGSDHIESVNDISNNEDEDSSEKIDVAMAVEEVKVEAKSGELEAQRTKAVWWKVPFQVLRYCFLRASPAWSFSVAAAFMGMMILGRKLYKMKRKAKSLHSKIAVNDKRVSHFADRAARLNEAFSVVRRVPVVRGPLTGGGANSWPAMSMR
BLAST of CsaV3_2G033240 vs. NCBI nr
Match: XP_004138661.1 (PREDICTED: uncharacterized protein LOC101221371 [Cucumis sativus] >KGN63077.1 hypothetical protein Csa_2G401370 [Cucumis sativus]) HSP 1 Score: 712.2 bits (1837), Expect = 8.9e-202 Identity = 363/363 (100.00%), Postives = 363/363 (100.00%), Query Frame = 0
BLAST of CsaV3_2G033240 vs. NCBI nr
Match: XP_008441179.1 (PREDICTED: uncharacterized protein LOC103485392 isoform X1 [Cucumis melo]) HSP 1 Score: 553.5 bits (1425), Expect = 5.3e-154 Identity = 296/363 (81.54%), Postives = 308/363 (84.85%), Query Frame = 0
BLAST of CsaV3_2G033240 vs. NCBI nr
Match: XP_008441180.1 (PREDICTED: uncharacterized protein LOC103485392 isoform X2 [Cucumis melo]) HSP 1 Score: 544.7 bits (1402), Expect = 2.5e-151 Identity = 294/363 (80.99%), Postives = 306/363 (84.30%), Query Frame = 0
BLAST of CsaV3_2G033240 vs. NCBI nr
Match: XP_022990623.1 (uncharacterized protein LOC111487451 isoform X1 [Cucurbita maxima]) HSP 1 Score: 373.2 bits (957), Expect = 9.8e-100 Identity = 221/365 (60.55%), Postives = 256/365 (70.14%), Query Frame = 0
BLAST of CsaV3_2G033240 vs. NCBI nr
Match: XP_023512045.1 (uncharacterized protein LOC111776880 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023512053.1 uncharacterized protein LOC111776880 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 372.9 bits (956), Expect = 1.3e-99 Identity = 221/366 (60.38%), Postives = 255/366 (69.67%), Query Frame = 0
BLAST of CsaV3_2G033240 vs. TAIR10
Match: AT4G10080.1 (unknown protein) HSP 1 Score: 110.2 bits (274), Expect = 2.8e-24 Identity = 80/226 (35.40%), Postives = 125/226 (55.31%), Query Frame = 0
BLAST of CsaV3_2G033240 vs. TAIR10
Match: AT4G13530.1 (unknown protein) HSP 1 Score: 103.6 bits (257), Expect = 2.6e-22 Identity = 86/257 (33.46%), Postives = 134/257 (52.14%), Query Frame = 0
BLAST of CsaV3_2G033240 vs. TrEMBL
Match: tr|A0A0A0LQL9|A0A0A0LQL9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G401370 PE=4 SV=1) HSP 1 Score: 712.2 bits (1837), Expect = 5.9e-202 Identity = 363/363 (100.00%), Postives = 363/363 (100.00%), Query Frame = 0
BLAST of CsaV3_2G033240 vs. TrEMBL
Match: tr|A0A1S3B3K7|A0A1S3B3K7_CUCME (uncharacterized protein LOC103485392 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485392 PE=4 SV=1) HSP 1 Score: 553.5 bits (1425), Expect = 3.5e-154 Identity = 296/363 (81.54%), Postives = 308/363 (84.85%), Query Frame = 0
BLAST of CsaV3_2G033240 vs. TrEMBL
Match: tr|A0A1S3B2D6|A0A1S3B2D6_CUCME (uncharacterized protein LOC103485392 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485392 PE=4 SV=1) HSP 1 Score: 544.7 bits (1402), Expect = 1.6e-151 Identity = 294/363 (80.99%), Postives = 306/363 (84.30%), Query Frame = 0
BLAST of CsaV3_2G033240 vs. TrEMBL
Match: tr|A0A0A0KUS6|A0A0A0KUS6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G648750 PE=4 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 2.4e-46 Identity = 135/361 (37.40%), Postives = 190/361 (52.63%), Query Frame = 0
BLAST of CsaV3_2G033240 vs. TrEMBL
Match: tr|A0A1S3CAH9|A0A1S3CAH9_CUCME (uncharacterized protein LOC103498665 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498665 PE=4 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 2.3e-44 Identity = 138/361 (38.23%), Postives = 189/361 (52.35%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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