Cucsa.088540 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.088540
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Actin-binding LIM protein 1, putative
Location	scaffold00888 : 824790 .. 827380 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAAAGATTACGGATAGCGTTTTGCCCTTTTCCCACTCTGATTCTCCATAACCCACCGCCATGGACGACGAGTTCCACGATTGGGAGCTTCTCCATGAGTATGACCCCACTTTCCCCCAACCTTACTCTTCCAATCTTCCCTATTCGAACTCGACGTTTTCGAAGGAATTTGAAGGCGATTCGGGCACCGAAAGCACAATCTGTTTGGATTACTTCTCTCTTCGTAATCACGAACCGAGTCCAAAAACTCCCCTGAAGTTCACTGTAACTAATGGGTGTTTGGTCGAGATAGAAAACCTCAGCTCCGTTGATTCTGGTTCGGAGATTCGGAGTTGTCGTAAGAATACGAGTGAATTTGGGTCTGACTTGGGAGACGACCTTTTGGGCGAATGTGAATTGAACCAATCTCACGAGAACGGTCCTTTAGGTATTACGAAAAGCGTAGCTGGGTTCGAAGAAATTTCAATCGAGGACGAGAATTTGGATAGACGGGAGGCCGATGATGGTGAATTGAAAGGCTCTCCTCTTGTTGCCAGAGATGAACTGCTTCGTGTGAAGGACACGTATGACCCGACGGAATCCGAAGAACCTAGAGAAGAAAGTGAGAGCCAAGATGAGATTTTGGACGACACTTATTCTAATTGGAGTGGAAACGAGTCATTTGCAATGAAATCTGGAGACGATGGAAAAGAGAACGATGCAGGCAGCGATCATATAGAGAGTGTAAATGATATTTCGAACAATGAAGATGAAGATTCGAGTGAGAAAATAGATGTGGCAATGGCGGTAGAAGAAGTGAAAGTTGAGGCAAAATCTGGTGAGTTAGAGGCACAGAGGACGAAAGCTGTGTGGTGGAAGGTTCCTTTTCAGGTTTTGAGGTATTGCTTTTTAAGGGCTAGCCCTGCATGGTCCTTTTCTGTGGCTGCTGCTTTCATGGGAATGATGATATTGGGACGTAAATTGTACAAGATGAAGAGGAAAGCTAAAAGCCTTCACTCGAAGATTGCGGTGAATGATAAGGTTAGTTATTGCGTCTTTCGATTACCATATTTTTGTCATCCTTGAGAGAACTTCTTTCGTTTAATACCCCTTTTGGAAGTAAGCAACGTAGTTTTGAATCAATCGGTGTTAAACATATTTGGAGATCCAGTTCAATTCCAAGCAACCTCGTTTGTTTTATGGGATGTGGTTCTTGTGATTGAGATGGTGTTTTTCTAAGCTTGTGATTGTTTCAATAGAATAACTCTCCTCTCAATGCAATTTCTTTGATTGACATTGGAGCACCTGTGATCCATCATAAATCCTCTCTTTTAATTGTGCTTTTTGTGTTGAAATTGATGTGCACTATCTTCTGGATTGCACAGGCAAGTGCCACCCTTGTATCATTATGCAGCTCTTTCCATTATTCACGTCAAACAAATAATTAAAATATTTTATAAAAGAAATAAGAAATTTTCAACATGGCACAATTTTTATGAACAATGTGGTAAGATGCACAAAGATAGGTGATGGACTTGTAGAAACTAACCAAAATTTGTTGTTTACTTCTGGAACTACCTTATTTTCATTATTTGTGGCTAAAGAAGCCCTGTAGCCAGTGCCAAGAAACTTGATTCCTTTAGTAGTGCCATTATACGTTTTTTCCTACCTTTGTTAGAACATTTGGAAAAGGAACTTCAGATGATTTAATGCCTAAACATGAGGGGCATATAGAATCAAACCCTTCTGGTTTGTTTATATTTGTAGTTAGGGTTAGACTTATACACGTCTCGACTTAACTCACGGGAAAGCTTTATCTAACCCTATAATATTTAGGTGTAAAGAAAACTCGTTAGGTAGGTGACCAACATGGGTTTAAAGGCATTCCTTACTATACCCATGTTCTTTATCTACCATAAGCCAATTCGCGATGATTGAGATGACGAAAATAAATTTGAAAGCATAGTAGAACCCATTAAAACTTTTAAAGACTGAGATGCAGTTGGATTATCGAATGAAATCTTGTTAGTGGGTCAATTAGCCTGGGTTAGAACTAGAAGCTTTCAAGCCTACCTATAGGCTTATTGACTTTTGTGATGTATAACTTTCTCATTACGAGGGAAAAATGAGGCTTTGTTCCCCTTCCCATATGCATACAAATTCATTTCATACTCTGGAAAACTTGATTGAATGATGGCAAAAACTTAATACTGGTACACAAATTTTTGTAGAGGGTATCGCACTTTGCAGATCGGGCTGCACGTTTGAATGAGGCCTTTTCGGTGGTGAGACGGGTGCCTGTGGTGAGAGGTCCATTGACAGGTGGAGGTGCAAACTCTTGGCCTGCCATGAGTATGAGATGAAGTTTCTTGTATTCATGAAAATCTAAACTATTTTGAGATGTTGGAGGTCTGGTTGTGTGCAACATAGTATGTAAATGTGAAGTTCATAGGTAGTTTTTCTTTCTTTCTTTCTTTCTTTTTGCGTTGATTTGTGTGTAAATGATGAATATGTAAGCCTCTTCCACACCAACTGTACTTTTTAGAATTTTGTATGATAAGATTTTACAGATTCAATGGATAATAGACATGCGCACCCCCGAAGAAGTGTT

mRNA sequence

AACAAAGATTACGGATAGCGTTTTGCCCTTTTCCCACTCTGATTCTCCATAACCCACCGCCATGGACGACGAGTTCCACGATTGGGAGCTTCTCCATGAGTATGACCCCACTTTCCCCCAACCTTACTCTTCCAATCTTCCCTATTCGAACTCGACGTTTTCGAAGGAATTTGAAGGCGATTCGGGCACCGAAAGCACAATCTGTTTGGATTACTTCTCTCTTCGTAATCACGAACCGAGTCCAAAAACTCCCCTGAAGTTCACTGTAACTAATGGGTGTTTGGTCGAGATAGAAAACCTCAGCTCCGTTGATTCTGGTTCGGAGATTCGGAGTTGTCGTAAGAATACGAGTGAATTTGGGTCTGACTTGGGAGACGACCTTTTGGGCGAATGTGAATTGAACCAATCTCACGAGAACGGTCCTTTAGGTATTACGAAAAGCGTAGCTGGGTTCGAAGAAATTTCAATCGAGGACGAGAATTTGGATAGACGGGAGGCCGATGATGGTGAATTGAAAGGCTCTCCTCTTGTTGCCAGAGATGAACTGCTTCGTGTGAAGGACACGTATGACCCGACGGAATCCGAAGAACCTAGAGAAGAAAGTGAGAGCCAAGATGAGATTTTGGACGACACTTATTCTAATTGGAGTGGAAACGAGTCATTTGCAATGAAATCTGGAGACGATGGAAAAGAGAACGATGCAGGCAGCGATCATATAGAGAGTGTAAATGATATTTCGAACAATGAAGATGAAGATTCGAGTGAGAAAATAGATGTGGCAATGGCGGTAGAAGAAGTGAAAGTTGAGGCAAAATCTGGTGAGTTAGAGGCACAGAGGACGAAAGCTGTGTGGTGGAAGGTTCCTTTTCAGGTTTTGAGGTATTGCTTTTTAAGGGCTAGCCCTGCATGGTCCTTTTCTGTGGCTGCTGCTTTCATGGGAATGATGATATTGGGACGTAAATTGTACAAGATGAAGAGGAAAGCTAAAAGCCTTCACTCGAAGATTGCGGTGAATGATAAGAGGGTATCGCACTTTGCAGATCGGGCTGCACGTTTGAATGAGGCCTTTTCGGTGGTGAGACGGGTGCCTGTGGTGAGAGGTCCATTGACAGGTGGAGGTGCAAACTCTTGGCCTGCCATGAGTATGAGATGAAGTTTCTTGTATTCATGAAAATCTAAACTATTTTGAGATGTTGGAGGTCTGGTTGTGTGCAACATAGTATGTAAATGTGAAGTTCATAGGTAGTTtttctttctttctttctttctttTTGCGTTGATTTGTGTGTAAATGATGAATATGTAAGCCTCTTCCACACCAACTGTACTTTTTAGAATTTTGTATGATAAGATTTTACAGATTCAATGGATAATAGACATGCGCACCCCCGAAGAAGTGTT

Coding sequence (CDS)

ATGGACGACGAGTTCCACGATTGGGAGCTTCTCCATGAGTATGACCCCACTTTCCCCCAACCTTACTCTTCCAATCTTCCCTATTCGAACTCGACGTTTTCGAAGGAATTTGAAGGCGATTCGGGCACCGAAAGCACAATCTGTTTGGATTACTTCTCTCTTCGTAATCACGAACCGAGTCCAAAAACTCCCCTGAAGTTCACTGTAACTAATGGGTGTTTGGTCGAGATAGAAAACCTCAGCTCCGTTGATTCTGGTTCGGAGATTCGGAGTTGTCGTAAGAATACGAGTGAATTTGGGTCTGACTTGGGAGACGACCTTTTGGGCGAATGTGAATTGAACCAATCTCACGAGAACGGTCCTTTAGGTATTACGAAAAGCGTAGCTGGGTTCGAAGAAATTTCAATCGAGGACGAGAATTTGGATAGACGGGAGGCCGATGATGGTGAATTGAAAGGCTCTCCTCTTGTTGCCAGAGATGAACTGCTTCGTGTGAAGGACACGTATGACCCGACGGAATCCGAAGAACCTAGAGAAGAAAGTGAGAGCCAAGATGAGATTTTGGACGACACTTATTCTAATTGGAGTGGAAACGAGTCATTTGCAATGAAATCTGGAGACGATGGAAAAGAGAACGATGCAGGCAGCGATCATATAGAGAGTGTAAATGATATTTCGAACAATGAAGATGAAGATTCGAGTGAGAAAATAGATGTGGCAATGGCGGTAGAAGAAGTGAAAGTTGAGGCAAAATCTGGTGAGTTAGAGGCACAGAGGACGAAAGCTGTGTGGTGGAAGGTTCCTTTTCAGGTTTTGAGGTATTGCTTTTTAAGGGCTAGCCCTGCATGGTCCTTTTCTGTGGCTGCTGCTTTCATGGGAATGATGATATTGGGACGTAAATTGTACAAGATGAAGAGGAAAGCTAAAAGCCTTCACTCGAAGATTGCGGTGAATGATAAGAGGGTATCGCACTTTGCAGATCGGGCTGCACGTTTGAATGAGGCCTTTTCGGTGGTGAGACGGGTGCCTGTGGTGAGAGGTCCATTGACAGGTGGAGGTGCAAACTCTTGGCCTGCCATGAGTATGAGATGA

Protein sequence

MDDEFHDWELLHEYDPTFPQPYSSNLPYSNSTFSKEFEGDSGTESTICLDYFSLRNHEPSPKTPLKFTVTNGCLVEIENLSSVDSGSEIRSCRKNTSEFGSDLGDDLLGECELNQSHENGPLGITKSVAGFEEISIEDENLDRREADDGELKGSPLVARDELLRVKDTYDPTESEEPREESESQDEILDDTYSNWSGNESFAMKSGDDGKENDAGSDHIESVNDISNNEDEDSSEKIDVAMAVEEVKVEAKSGELEAQRTKAVWWKVPFQVLRYCFLRASPAWSFSVAAAFMGMMILGRKLYKMKRKAKSLHSKIAVNDKRVSHFADRAARLNEAFSVVRRVPVVRGPLTGGGANSWPAMSMR*

Homology

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BLAST of Cucsa.088540 vs. TrEMBL
Match: A0A0A0LQL9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G401370 PE=4 SV=1)

HSP 1 Score: 731.9 bits (1888), Expect = 3.9e-208
Identity = 361/363 (99.45%), Postives = 361/363 (99.45%), Query Frame = 1


Query: 1   MDDEFHDWELLHEYDPTFPQPYSSNLPYSNSTFSKEFEGDSGTESTICLDYFSLRNHEPS 60
           MDDEFHDWELLHEYDPTFPQPYSSNLPYSNSTFSKEFEGDSGTESTICLDYFSLRNHE S
Sbjct: 1   MDDEFHDWELLHEYDPTFPQPYSSNLPYSNSTFSKEFEGDSGTESTICLDYFSLRNHESS 60

Query: 61  PKTPLKFTVTNGCLVEIENLSSVDSGSEIRSCRKNTSEFGSDLGDDLLGECELNQSHENG 120
           PKTPLKFTVTNGCLVEIENLSSVDSGSEIRSCRKNTSEFGSDLGDDLLGECELNQSHENG
Sbjct: 61  PKTPLKFTVTNGCLVEIENLSSVDSGSEIRSCRKNTSEFGSDLGDDLLGECELNQSHENG 120

Query: 121 PLGITKSVAGFEEISIEDENLDRREADDGELKGSPLVARDELLRVKDTYDPTESEEPREE 180
           PLGITKSVAGFEEISIEDENLDRRE DDGELKGSPLVARDELLRVKDTYDPTESEEPREE
Sbjct: 121 PLGITKSVAGFEEISIEDENLDRRETDDGELKGSPLVARDELLRVKDTYDPTESEEPREE 180

Query: 181 SESQDEILDDTYSNWSGNESFAMKSGDDGKENDAGSDHIESVNDISNNEDEDSSEKIDVA 240
           SESQDEILDDTYSNWSGNESFAMKSGDDGKENDAGSDHIESVNDISNNEDEDSSEKIDVA
Sbjct: 181 SESQDEILDDTYSNWSGNESFAMKSGDDGKENDAGSDHIESVNDISNNEDEDSSEKIDVA 240

Query: 241 MAVEEVKVEAKSGELEAQRTKAVWWKVPFQVLRYCFLRASPAWSFSVAAAFMGMMILGRK 300
           MAVEEVKVEAKSGELEAQRTKAVWWKVPFQVLRYCFLRASPAWSFSVAAAFMGMMILGRK
Sbjct: 241 MAVEEVKVEAKSGELEAQRTKAVWWKVPFQVLRYCFLRASPAWSFSVAAAFMGMMILGRK 300

Query: 301 LYKMKRKAKSLHSKIAVNDKRVSHFADRAARLNEAFSVVRRVPVVRGPLTGGGANSWPAM 360
           LYKMKRKAKSLHSKIAVNDKRVSHFADRAARLNEAFSVVRRVPVVRGPLTGGGANSWPAM
Sbjct: 301 LYKMKRKAKSLHSKIAVNDKRVSHFADRAARLNEAFSVVRRVPVVRGPLTGGGANSWPAM 360

Query: 361 SMR 364
           SMR
Sbjct: 361 SMR 363

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BLAST of Cucsa.088540 vs. TrEMBL
Match: A0A0A0KUS6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G648750 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 2.1e-52
Identity = 135/361 (37.40%), Postives = 190/361 (52.63%), Query Frame = 1


Query: 4   EFHDWE-LLHEYDPTFPQPYSSNLPYSNSTFSKEFEGDSGTESTICLDYFSLRNHEPSPK 63
           E  DWE LLH+ +P      ++      ST     EG+S ++S I  DYFSL N     +
Sbjct: 8   EIQDWEVLLHDLNPETALT-AAEFSGEKSTHFGGIEGESDSDSIIKSDYFSLDNQGRRGR 67

Query: 64  T-PLKFTVTNGCLVEIENLSSVDSGSEIRSCRKNTSEFGSDLGDDLLGECELNQSHENGP 123
           T P +        VE +N S +D  SE R  R N+SE  SD G D   E + N+      
Sbjct: 68  TVPERDLNEEEGSVESDNPSWIDPSSENRYGRVNSSELWSDSGSDRSDERKFNELDSKAE 127

Query: 124 LGITKSVAGFEEISIEDENLDRREADDGELKGSPLVARDELLRVKDTYDPTESEEPREES 183
            GI  S  G EE+S     L+  ++ + ++ GS               DP   E   EE 
Sbjct: 128 SGIAGSFQGDEELSGRILKLESLKSHENKITGS---------------DPN-IEVGLEEF 187

Query: 184 ESQDEILDDTYSNWSGNESFAMKSGDDGKENDAGSDHIESVNDISNNEDEDSSEKIDVAM 243
           +       D  S WS +    +++G    + + G +H++ + ++                
Sbjct: 188 DGIQSQSKDLNSFWSDSGEDIVQNGSKVVKLEEGKEHLDEIKNLQ--------------- 247

Query: 244 AVEEVKVEAKSGELEAQRTKAVWWKVPFQVLRYCFLRASPAWSFSVAAAFMGMMILGRKL 303
            +EE KV A+SG     + K +WWKVPF+VL+YC  +ASP WSFS+AAA MG ++LGR+L
Sbjct: 248 -IEETKVNAESGSEVGDKRKVIWWKVPFEVLKYCLFKASPVWSFSIAAALMGFIVLGRRL 307

Query: 304 YKMKRKAKSLHSKIAVNDKRVSHFADRAARLNEAFSVVRRVPVVRGPLTGGGANSWPAMS 363
           Y++KRK++SLH K+ +++K+ S F  RAARLNEAFSVVRRVP+VR  L   G N WPAMS
Sbjct: 308 YRIKRKSQSLHLKVILDEKKGSQFLSRAARLNEAFSVVRRVPIVRPALPAAGINPWPAMS 335

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BLAST of Cucsa.088540 vs. TrEMBL
Match: A0A061FIG4_THECC (Actin-binding LIM protein 1, putative OS=Theobroma cacao GN=TCM_036302 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 4.8e-49
Identity = 144/386 (37.31%), Postives = 196/386 (50.78%), Query Frame = 1


Query: 1   MDDEFHDWELLHEYDPTFPQPYSSNLPYSNSTFSK---EFEGDSGTESTICLDYFSLRNH 60
           M+ E  DWE+L   D        SN    NS   +   E EGD  T+  I  DYFSL N 
Sbjct: 1   MEGELLDWEVLQNSDS------DSNSIVVNSPELRNLEEIEGD--TDGMIRSDYFSLDNQ 60

Query: 61  EPSPKTPLKFTVTNGCLVEIENLSSVDSGSEIRSCRKNTSEFGSDLGDDLLGECELNQSH 120
               K       +    VE +N S +D G E R  RKN  EF SD G D   + + N S 
Sbjct: 61  SMYAKVG---DASEEGSVESDNPSWIDPGPETRYERKNLGEFWSDSGSDRSDDRKFNDSD 120

Query: 121 ENGPLGITKS------VAGFEEISIEDENLDRREADDGELKGSPLVARDELLRVKDTYDP 180
               LG  ++        G  E+  + EN  + + DD   K S L  +  L         
Sbjct: 121 VKNELGFVENEKPPVDFEGIGEMEAKSENSGKLKPDDS--KFSDLDGKKGL--------- 180

Query: 181 TESEEPREESESQDEILDDTYSNWSGNESFAMKSGDDGKENDAG-SDHIESVNDISNNED 240
                   E + QD+ L   +S+ SG +  +MK  DD KE D G  D ++   ++ N+ +
Sbjct: 181 -----GFGEIQVQDKDLGKFWSD-SGGDGISMKFEDDEKEGDIGFGDFMKKGAEVENSGE 240

Query: 241 EDSSEKIDVAM-------------AVEEVKVEAKSGELEAQRTKAVWWKVPFQVLRYCFL 300
            D      V +              ++E+K+  KS + E ++ + VWWKVPF++LRYC  
Sbjct: 241 LDDGNGSTVELEGGEGNQIDTEGATIDEMKLCVKSVD-EGEKKRVVWWKVPFELLRYCVF 300

Query: 301 RASPAWSFSVAAAFMGMMILGRKLYKMKRKAKSLHSKIAVNDKRVSHFADRAARLNEAFS 360
           + SP WSFSVAAA MG  ILG +LYKMKRK+++L  K+ ++DK+VS F  RAARLNEAFS
Sbjct: 301 KVSPVWSFSVAAAVMGFAILGHRLYKMKRKSRNLPLKVTMDDKKVSQFMTRAARLNEAFS 357

Query: 361 VVRRVPVVRGPLTGGGANSWPAMSMR 364
           VVRRVP++R  L+  G N WP MS+R
Sbjct: 361 VVRRVPIIRPSLSTAGVNPWPVMSLR 357

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BLAST of Cucsa.088540 vs. TrEMBL
Match: A0A067LEC9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17210 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 6.3e-49
Identity = 144/368 (39.13%), Postives = 196/368 (53.26%), Query Frame = 1


Query: 4   EFHDWELLHEYDPTFPQPYSSNLPYSNSTFSKEFEGDSGTESTICLDYFSLRNHEPSPKT 63
           EF DWELL   D       +S    +NS   +E E +S  E  + LDYFSL N E   KT
Sbjct: 8   EFQDWELLVNSDT---DGVNSPKSVNNSRNIEEIEVES--EGVLRLDYFSLENDERYAKT 67

Query: 64  PLKFTVTNGCLVEIENLSSVDSGSEIRSCRKNTSEFGSDLGDDLLGECELNQSHENGPLG 123
            +  +      +E +N S +D G E R  R+N+ EF SD G D   E +         LG
Sbjct: 68  AIDASDEGS--IESDNPSWIDPGPETRYQRRNSGEFWSDSGSDRSDERKFTDFDVKSELG 127

Query: 124 ITKSV--------AGFEEISIEDENLDRREADDGELKGSPLVARDELLRVKDTYDPTESE 183
             ++V        AG  EI  +    +  E++   L+G   V  DE ++ +  +      
Sbjct: 128 FVENVKTEVVFGVAG--EIEGKKGKFESSESNLINLEGKNEVGSDENVKSQSGF------ 187

Query: 184 EPREESESQDEILDDTYSNWSGNESFAMKSGDDGKENDAGSDHIESVNDISNNEDEDSSE 243
           E   E+ S+D+   D    WS +    +  GD G+  + GS+ +   N I +   E++S 
Sbjct: 188 EEFGENHSKDK---DFSKFWSDSGGDNLVFGDVGRVTE-GSEILGESN-IGDASKEENSS 247

Query: 244 KIDVAMAVEEVKVEAKSGELEAQRTKAVWWKVPFQVLRYCFLRASPAWSFSVAAAFMGMM 303
            I V         E K G  E +R K VWWKVPF++L+YC  R SP W+FS+AAAFMG +
Sbjct: 248 IIAVG--------ERKPGGDEEKR-KVVWWKVPFELLKYCVFRISPVWTFSMAAAFMGFV 307

Query: 304 ILGRKLYKMKRKAKSLHSKIAVNDKRVSHFADRAARLNEAFSVVRRVPVVRGPLTGGGAN 363
           ILGR+LY+MKRK + L  K+ V+DK+VS F  RAARLNEAFSVVRRVP+VR  L   G N
Sbjct: 308 ILGRRLYRMKRKTRGLPLKVTVDDKKVSQFMSRAARLNEAFSVVRRVPIVRPLLPASGVN 346

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BLAST of Cucsa.088540 vs. TrEMBL
Match: V4T3Z3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020185mg PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.2e-47
Identity = 133/366 (36.34%), Postives = 195/366 (53.28%), Query Frame = 1


Query: 5   FHDWELLHEYDPTFPQPYSSNLPYSNSTFSKEFEGDSGTESTICLDYFSLRNHEPSPKTP 64
           F +WELL   D       +S  P  +    +E EGD  +E  I  DYFS+ N +   KT 
Sbjct: 88  FQEWELLQNTDSDV---VNSENPVESQRSFEEIEGDY-SEGMIRADYFSIDNEKRHVKTS 147

Query: 65  LKFTVTNGCLVEIENLSSVDSGSEIRSCRKNTSEFGSDLGDDLLGECELNQSHENGPLGI 124
           L   V+    VE +N S +D GSE +  RKN+  F SD G D   E +         LG 
Sbjct: 148 L--VVSEEGSVESDNPSWIDPGSETQYQRKNSGGFWSDSGSDRSDERKYGAFDGRNELGF 207

Query: 125 TKSV---AGFEEISIEDENLDRREADDGELKGSPLVARDELLRVKDTYDPTESEEPREES 184
            +++    GFE I       +R    D  +K      R+EL   + T    + +      
Sbjct: 208 VENLKNGVGFEGIG------ERGIGADNLMKFGDFDLRNELGFDESTKGQVDFKGIGVVQ 267

Query: 185 ESQDEILDDTYSNWSGNESFAMKSGDDGKENDAG-SDHIESVNDISNN---EDEDSSEKI 244
           +   ++    +S+  G+   +M     GK ++    DH++  ++       E  + S + 
Sbjct: 268 DQNKDLGSRFWSDSGGDGLVSMSFEGVGKGSEVSFGDHVDKQDESETCVEFEGGNGSMEE 327

Query: 245 DVAMAVEEVKVEAKSGELEAQRTKAVWWKVPFQVLRYCFLRASPAWSFSVAAAFMGMMIL 304
           +  +A+EE +   KS   + +R +  WWKVPF+VL+YC L+ +P WSFS+AAA MG++IL
Sbjct: 328 NSNVAIEESRAGEKSAG-DGERKRVAWWKVPFEVLKYCVLKVNPVWSFSMAAAVMGLVIL 387

Query: 305 GRKLYKMKRKAKSLHSKIAVNDKRVSHFADRAARLNEAFSVVRRVPVVRGPLTGGGANSW 364
           GR+LYKMK+K+++L  K+ ++DK+VS F  RAARLNEAFSVVRRVP+VR  L   GAN W
Sbjct: 388 GRRLYKMKQKSRNLQLKVTLDDKKVSQFRSRAARLNEAFSVVRRVPIVRPALPVPGANPW 440

[Close]

BLAST of Cucsa.088540 vs. TAIR10
Match: AT4G10080.1 (AT4G10080.1 unknown protein)

HSP 1 Score: 130.6 bits (327), Expect = 2.0e-30
Identity = 112/369 (30.35%), Postives = 169/369 (45.80%), Query Frame = 1


Query: 7   DWELLHEYDPTFPQPYSSNLPYSNSTFSKEFEGDSGTESTICLDYFSLRNHEPSPKTPLK 66
           DWELLH    T           S  + + E + +S   S++  D   L +H         
Sbjct: 3   DWELLHHGSDT----------ESTDSITSETKLES---SSVIDDGMILSDH--------- 62

Query: 67  FTVTNGCLVEIENLSS--VDSGSEIRSCRKNTSEFGSDLGDDLLGECELNQSHENGPLGI 126
           F+ T+  ++E     S  VD GSE      N  E   D G D     +          G+
Sbjct: 63  FSATDR-VIESGYFDSFRVDYGSECL----NPGEVSVDSGLDQFSVSQSGDDCVRNEFGV 122

Query: 127 TKSVAGFEEISIEDENLDRREADDGELKGSPLVARDE-LLRVKDTYDPTESEEPREESES 186
             S  G                 DGE++ S   A +E  +  +   + T       E+E+
Sbjct: 123 YDSETGI--------------LGDGEVRLSDFEAANEKYVESEAATELTGGTVSHYETEN 182

Query: 187 QDEILDDTYSNWSGNESFAMKSGDDGKE--NDAGSDHIESVND-ISNNEDEDSSEKIDVA 246
            +E +D  +     NES   +  +D  +  +D G + + S +  + N E E  S+ +  +
Sbjct: 183 LEEFVDGRHGE---NESGVEEPIEDSSKLCSDLGGNELVSRDSGVVNGEKEVVSDSVVAS 242

Query: 247 MAVEE------VKVEAKSGELEAQRTKAVWWKVPFQVLRYCFLRASPAWSFSVAAAFMGM 306
             V E      V+V   S   E +  + VWWK+PF +L+Y   R  P WS S+AAA MG+
Sbjct: 243 SEVIEGSGGDTVEVGGVSSGGEGKSRETVWWKMPFVLLKYSVFRIGPVWSVSMAAAVMGL 302

Query: 307 MILGRKLYKMKRKAKSLHSKIAVNDKRVSHFADRAARLNEAFSVVRRVPVVRGPLTGGGA 364
           ++LGR+LY MK+KA+  H K+ ++DK+ S    +AARLNE F+ VRRVPV+R  L   GA
Sbjct: 303 VLLGRRLYNMKKKAQRFHLKVTIDDKKASRVMSQAARLNEVFTEVRRVPVIRPALPSPGA 325

[Close]

BLAST of Cucsa.088540 vs. TAIR10
Match: AT4G13530.1 (AT4G13530.1 unknown protein)

HSP 1 Score: 123.2 bits (308), Expect = 3.2e-28
Identity = 89/257 (34.63%), Postives = 137/257 (53.31%), Query Frame = 1


Query: 125 TKSVAGFEEISIEDEN-LDRREADDGE---LKGSP--LVARDELLRVKDTYDPTESEEPR 184
           T+ +  F+  S+E+++ L R EA+D +     GSP  +    ++      Y P    E  
Sbjct: 33  TQGMIRFDHFSLENQSGLSRLEANDEDGSVQSGSPGWIEPSSDV-----PYGPKHFSELW 92

Query: 185 EESESQ----DEILDDTYSNWSGNESFAMKSGDDGKENDAGS-DHIESVND----ISNNE 244
            +S S       ++DD  +N  G E            N+ G  ++ ES+      IS++E
Sbjct: 93  SDSSSDRLDDQRLVDDDVNNEMGIE-----------RNEVGIVEYSESIAQDMDLISSDE 152

Query: 245 DEDSSEKIDVAMAVEEVKVE--AKSGELEAQRTKAVWWKVPFQVLRYCFLRASPAWSFSV 304
            ++ S    V      V ++   KSG    +    VWWK+P +VL+YC L+ +P WS S+
Sbjct: 153 RKEESLLHPVEGEGNSVSIDPGVKSGGGGGEEKGFVWWKIPIEVLKYCVLKINPIWSLSM 212

Query: 305 AAAFMGMMILGRKLYKMKRKAKSLHSKIAVNDKRVSHFADRAARLNEAFSVVRRVPVVRG 364
           AAAF+G ++LGR+LY MK+K +SL  K+ ++DK+V   A+ AAR NEA SVV+RVP++R 
Sbjct: 213 AAAFVGFVMLGRRLYNMKKKTRSLQLKVLLDDKKV---ANHAARWNEAISVVKRVPIIRP 270

[Close]

BLAST of Cucsa.088540 vs. NCBI nr
Match: gi|449441782|ref|XP_004138661.1| (PREDICTED: uncharacterized protein LOC101221371 [Cucumis sativus])

HSP 1 Score: 731.9 bits (1888), Expect = 5.6e-208
Identity = 361/363 (99.45%), Postives = 361/363 (99.45%), Query Frame = 1


Query: 1   MDDEFHDWELLHEYDPTFPQPYSSNLPYSNSTFSKEFEGDSGTESTICLDYFSLRNHEPS 60
           MDDEFHDWELLHEYDPTFPQPYSSNLPYSNSTFSKEFEGDSGTESTICLDYFSLRNHE S
Sbjct: 1   MDDEFHDWELLHEYDPTFPQPYSSNLPYSNSTFSKEFEGDSGTESTICLDYFSLRNHESS 60

Query: 61  PKTPLKFTVTNGCLVEIENLSSVDSGSEIRSCRKNTSEFGSDLGDDLLGECELNQSHENG 120
           PKTPLKFTVTNGCLVEIENLSSVDSGSEIRSCRKNTSEFGSDLGDDLLGECELNQSHENG
Sbjct: 61  PKTPLKFTVTNGCLVEIENLSSVDSGSEIRSCRKNTSEFGSDLGDDLLGECELNQSHENG 120

Query: 121 PLGITKSVAGFEEISIEDENLDRREADDGELKGSPLVARDELLRVKDTYDPTESEEPREE 180
           PLGITKSVAGFEEISIEDENLDRRE DDGELKGSPLVARDELLRVKDTYDPTESEEPREE
Sbjct: 121 PLGITKSVAGFEEISIEDENLDRRETDDGELKGSPLVARDELLRVKDTYDPTESEEPREE 180

Query: 181 SESQDEILDDTYSNWSGNESFAMKSGDDGKENDAGSDHIESVNDISNNEDEDSSEKIDVA 240
           SESQDEILDDTYSNWSGNESFAMKSGDDGKENDAGSDHIESVNDISNNEDEDSSEKIDVA
Sbjct: 181 SESQDEILDDTYSNWSGNESFAMKSGDDGKENDAGSDHIESVNDISNNEDEDSSEKIDVA 240

Query: 241 MAVEEVKVEAKSGELEAQRTKAVWWKVPFQVLRYCFLRASPAWSFSVAAAFMGMMILGRK 300
           MAVEEVKVEAKSGELEAQRTKAVWWKVPFQVLRYCFLRASPAWSFSVAAAFMGMMILGRK
Sbjct: 241 MAVEEVKVEAKSGELEAQRTKAVWWKVPFQVLRYCFLRASPAWSFSVAAAFMGMMILGRK 300

Query: 301 LYKMKRKAKSLHSKIAVNDKRVSHFADRAARLNEAFSVVRRVPVVRGPLTGGGANSWPAM 360
           LYKMKRKAKSLHSKIAVNDKRVSHFADRAARLNEAFSVVRRVPVVRGPLTGGGANSWPAM
Sbjct: 301 LYKMKRKAKSLHSKIAVNDKRVSHFADRAARLNEAFSVVRRVPVVRGPLTGGGANSWPAM 360

Query: 361 SMR 364
           SMR
Sbjct: 361 SMR 363

[Close]

BLAST of Cucsa.088540 vs. NCBI nr
Match: gi|659081151|ref|XP_008441179.1| (PREDICTED: uncharacterized protein LOC103485392 isoform X1 [Cucumis melo])

HSP 1 Score: 633.6 bits (1633), Expect = 2.1e-178
Identity = 320/363 (88.15%), Postives = 332/363 (91.46%), Query Frame = 1


Query: 1   MDDEFHDWELLHEYDPTFPQPYSSNLPYSNSTFSKEFEGDSGTESTICLDYFSLRNHEPS 60
           MDDEF DWELLHEYD TFPQPYSSNLP SNS F +E EGDSG+ESTICLDYFSLR HEPS
Sbjct: 60  MDDEFQDWELLHEYDRTFPQPYSSNLPDSNSRFFQEIEGDSGSESTICLDYFSLRKHEPS 119

Query: 61  PKTPLKFTVTNGCLVEIENLSSVDSGSEIRSCRKNTSEFGSDLGDDLLGECELNQSHENG 120
            KTPLK TVT+ CLVE ENLSSVDSGSE RSCRKNTSE GSDLG+DLLGECELNQSH NG
Sbjct: 120 SKTPLKSTVTDECLVEPENLSSVDSGSENRSCRKNTSEIGSDLGNDLLGECELNQSHANG 179

Query: 121 PLGITKSVAGFEEISIEDENLDRREADDGELKGSPLVARDELLRVKDTYDPTESEEPREE 180
            L ITKSVAGFEEIS + ENL+RREADDGELKGSPLVARDE LR KDTY+PTESEE  EE
Sbjct: 180 LLDITKSVAGFEEISTDAENLNRREADDGELKGSPLVARDEPLRGKDTYNPTESEESSEE 239

Query: 181 SESQDEILDDTYSNWSGNESFAMKSGDDGKENDAGSDHIESVNDISNNEDEDSSEKIDVA 240
           SESQDEILDDT SNWSGN SFAMK+GDDGKENDAG+DHIESVNDISNN D DSSEKIDVA
Sbjct: 240 SESQDEILDDTCSNWSGNMSFAMKAGDDGKENDAGNDHIESVNDISNNGDGDSSEKIDVA 299

Query: 241 MAVEEVKVEAKSGELEAQRTKAVWWKVPFQVLRYCFLRASPAWSFSVAAAFMGMMILGRK 300
           MAVEEVKVEAKSGELEAQR KAVWWKVPFQVLRYCFLRASPAWSFSVAAAFMG+MILGR+
Sbjct: 300 MAVEEVKVEAKSGELEAQRRKAVWWKVPFQVLRYCFLRASPAWSFSVAAAFMGVMILGRR 359

Query: 301 LYKMKRKAKSLHSKIAVNDKRVSHFADRAARLNEAFSVVRRVPVVRGPLTGGGANSWPAM 360
           LYKMKRKAKSLH KIAVNDK VS FADRAARLNEAFSVVRRVPVVR PLTGGGANSWPA+
Sbjct: 360 LYKMKRKAKSLHLKIAVNDKNVSQFADRAARLNEAFSVVRRVPVVRAPLTGGGANSWPAL 419

Query: 361 SMR 364
           SMR
Sbjct: 420 SMR 422

[Close]

BLAST of Cucsa.088540 vs. NCBI nr
Match: gi|659081153|ref|XP_008441180.1| (PREDICTED: uncharacterized protein LOC103485392 isoform X2 [Cucumis melo])

HSP 1 Score: 624.8 bits (1610), Expect = 9.6e-176
Identity = 318/363 (87.60%), Postives = 330/363 (90.91%), Query Frame = 1


Query: 1   MDDEFHDWELLHEYDPTFPQPYSSNLPYSNSTFSKEFEGDSGTESTICLDYFSLRNHEPS 60
           MDDEF DWELLHEYD TFPQPYSSNLP SNS F +E EGDSG+ESTICLDYFSLR HEPS
Sbjct: 60  MDDEFQDWELLHEYDRTFPQPYSSNLPDSNSRFFQEIEGDSGSESTICLDYFSLRKHEPS 119

Query: 61  PKTPLKFTVTNGCLVEIENLSSVDSGSEIRSCRKNTSEFGSDLGDDLLGECELNQSHENG 120
            KTPLK TVT+ CLVE ENLSSVDSGSE RSCRKNTSE GSDLG+DLLGECELNQSH NG
Sbjct: 120 SKTPLKSTVTDECLVEPENLSSVDSGSENRSCRKNTSEIGSDLGNDLLGECELNQSHANG 179

Query: 121 PLGITKSVAGFEEISIEDENLDRREADDGELKGSPLVARDELLRVKDTYDPTESEEPREE 180
            L ITKSVAGFEEIS + ENL+RREADDGELKGSPLVARDE LR KDTY+PTESEE  EE
Sbjct: 180 LLDITKSVAGFEEISTDAENLNRREADDGELKGSPLVARDEPLRGKDTYNPTESEESSEE 239

Query: 181 SESQDEILDDTYSNWSGNESFAMKSGDDGKENDAGSDHIESVNDISNNEDEDSSEKIDVA 240
           SESQDEILDDT SNWSGN SFAMK+GDDGKENDAG+DHIESVNDISNN D DSSEKIDVA
Sbjct: 240 SESQDEILDDTCSNWSGNMSFAMKAGDDGKENDAGNDHIESVNDISNNGDGDSSEKIDVA 299

Query: 241 MAVEEVKVEAKSGELEAQRTKAVWWKVPFQVLRYCFLRASPAWSFSVAAAFMGMMILGRK 300
           MAVEEVKVEAKSGELEAQR KAVWWKVPFQVLRYCFLRASPAWSFSVAAAFMG+MILGR+
Sbjct: 300 MAVEEVKVEAKSGELEAQRRKAVWWKVPFQVLRYCFLRASPAWSFSVAAAFMGVMILGRR 359

Query: 301 LYKMKRKAKSLHSKIAVNDKRVSHFADRAARLNEAFSVVRRVPVVRGPLTGGGANSWPAM 360
           LYKMKRKAKSLH KIAVNDK    FADRAARLNEAFSVVRRVPVVR PLTGGGANSWPA+
Sbjct: 360 LYKMKRKAKSLHLKIAVNDK----FADRAARLNEAFSVVRRVPVVRAPLTGGGANSWPAL 418

Query: 361 SMR 364
           SMR
Sbjct: 420 SMR 418

[Close]

BLAST of Cucsa.088540 vs. NCBI nr
Match: gi|743921589|ref|XP_011004860.1| (PREDICTED: uncharacterized protein LOC105111244 [Populus euphratica])

HSP 1 Score: 215.7 bits (548), Expect = 1.3e-52
Identity = 150/364 (41.21%), Postives = 198/364 (54.40%), Query Frame = 1


Query: 4   EFHDWELLHEYDPTFPQPYSSNLPYSNSTFSKEFEGD-SGTESTICLDYFSLRNHEPSPK 63
           +F DWELL   +         N P S +  S+ FE   + TE    LDYFSL N     K
Sbjct: 10  DFQDWELLANSESDLV-----NSPISVADSSRSFEEIVADTEGMFRLDYFSLENDNRYVK 69

Query: 64  TPLKFTVTNGCLVEIENLSSVDSGSEIRSCRKNTSEFGSDLGDDLLGECELNQSHENGPL 123
           T L  T      VE +N S +D GSE R  R+N+ EF  D G D   + +L        L
Sbjct: 70  TTLDATGEGS--VESDNPSWIDPGSETRFQRRNSVEFWPDSGSDRSDDRKLGDFDVKNEL 129

Query: 124 GITKSV---AGFEEISIEDENLDRREADDGELKGSPLVARDELLRVKDTYDPTESEEPRE 183
           G+ +S     GFEEI   +    + E+ +G++       R   L  ++      S E   
Sbjct: 130 GLVESERTDVGFEEIGEIEAKEGKLESLEGKVSN---FERKSELVFEENVKVHVSLEGFG 189

Query: 184 ESESQDEILDDTYSNWSGNESFAMKSGDDGKENDAGSDHIESVNDISNNEDEDSSEKIDV 243
           E++S+D+ L   +S+  G++ F   SGD GK+   GS+ +         + E  +E  DV
Sbjct: 190 ETQSKDKELVKFWSDSGGDDLF---SGDVGKDQ-VGSEIL--------GDSEGENESKDV 249

Query: 244 AMAVEEVKVEAKSGELEAQRTKAVWWKVPFQVLRYCFLRASPAWSFSVAAAFMGMMILGR 303
            ++V  V  E K G+ E ++ K V WKVPF++LRYC  R SP WS SVAAA MG +ILGR
Sbjct: 250 NLSVVAVG-ETKPGD-EVEKRKVVLWKVPFEMLRYCVFRFSPVWSVSVAAAVMGFVILGR 309

Query: 304 KLYKMKRKAKSLHSKIAVNDKRVSHFADRAARLNEAFSVVRRVPVVRGPLTGGGANSWPA 363
           +LYKMKRK KSL  K+ V+DK+VSHF  RAARLNE FSVVRRVP+VR  L   G N WP 
Sbjct: 310 RLYKMKRKTKSLQLKVTVDDKKVSHFMSRAARLNETFSVVRRVPIVRPLLPAAGVNPWPV 349

[Close]

BLAST of Cucsa.088540 vs. NCBI nr
Match: gi|449447573|ref|XP_004141542.1| (PREDICTED: uncharacterized protein LOC101203805 isoform X1 [Cucumis sativus])

HSP 1 Score: 214.5 bits (545), Expect = 3.0e-52
Identity = 135/361 (37.40%), Postives = 190/361 (52.63%), Query Frame = 1


Query: 4   EFHDWE-LLHEYDPTFPQPYSSNLPYSNSTFSKEFEGDSGTESTICLDYFSLRNHEPSPK 63
           E  DWE LLH+ +P      ++      ST     EG+S ++S I  DYFSL N     +
Sbjct: 8   EIQDWEVLLHDLNPETALT-AAEFSGEKSTHFGGIEGESDSDSIIKSDYFSLDNQGRRGR 67

Query: 64  T-PLKFTVTNGCLVEIENLSSVDSGSEIRSCRKNTSEFGSDLGDDLLGECELNQSHENGP 123
           T P +        VE +N S +D  SE R  R N+SE  SD G D   E + N+      
Sbjct: 68  TVPERDLNEEEGSVESDNPSWIDPSSENRYGRVNSSELWSDSGSDRSDERKFNELDSKAE 127

Query: 124 LGITKSVAGFEEISIEDENLDRREADDGELKGSPLVARDELLRVKDTYDPTESEEPREES 183
            GI  S  G EE+S     L+  ++ + ++ GS               DP   E   EE 
Sbjct: 128 SGIAGSFQGDEELSGRILKLESLKSHENKITGS---------------DPN-IEVGLEEF 187

Query: 184 ESQDEILDDTYSNWSGNESFAMKSGDDGKENDAGSDHIESVNDISNNEDEDSSEKIDVAM 243
           +       D  S WS +    +++G    + + G +H++ + ++                
Sbjct: 188 DGIQSQSKDLNSFWSDSGEDIVQNGSKVVKLEEGKEHLDEIKNLQ--------------- 247

Query: 244 AVEEVKVEAKSGELEAQRTKAVWWKVPFQVLRYCFLRASPAWSFSVAAAFMGMMILGRKL 303
            +EE KV A+SG     + K +WWKVPF+VL+YC  +ASP WSFS+AAA MG ++LGR+L
Sbjct: 248 -IEETKVNAESGSEVGDKRKVIWWKVPFEVLKYCLFKASPVWSFSIAAALMGFIVLGRRL 307

Query: 304 YKMKRKAKSLHSKIAVNDKRVSHFADRAARLNEAFSVVRRVPVVRGPLTGGGANSWPAMS 363
           Y++KRK++SLH K+ +++K+ S F  RAARLNEAFSVVRRVP+VR  L   G N WPAMS
Sbjct: 308 YRIKRKSQSLHLKVILDEKKGSQFLSRAARLNEAFSVVRRVPIVRPALPAAGINPWPAMS 335

The following BLAST results are available for this feature:

BLAST of Cucsa.088540 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQL9_CUCSA	3.9e-208	99.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G401370 PE=4 SV=1	[more]
A0A0A0KUS6_CUCSA	2.1e-52	37.40	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G648750 PE=4 SV=1	[more]
A0A061FIG4_THECC	4.8e-49	37.31	Actin-binding LIM protein 1, putative OS=Theobroma cacao GN=TCM_036302 PE=4 SV=1	[more]
A0A067LEC9_JATCU	6.3e-49	39.13	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17210 PE=4 SV=1	[more]
V4T3Z3_9ROSI	1.2e-47	36.34	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020185mg PE=4 SV=1	[more]

BLAST of Cucsa.088540 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G10080.1	2.0e-30	30.35	unknown protein	[more]
AT4G13530.1	3.2e-28	34.63	unknown protein	[more]

BLAST of Cucsa.088540 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449441782\|ref\|XP_004138661.1\|	5.6e-208	99.45	PREDICTED: uncharacterized protein LOC101221371 [Cucumis sativus]	[more]
gi\|659081151\|ref\|XP_008441179.1\|	2.1e-178	88.15	PREDICTED: uncharacterized protein LOC103485392 isoform X1 [Cucumis melo]	[more]
gi\|659081153\|ref\|XP_008441180.1\|	9.6e-176	87.60	PREDICTED: uncharacterized protein LOC103485392 isoform X2 [Cucumis melo]	[more]
gi\|743921589\|ref\|XP_011004860.1\|	1.3e-52	41.21	PREDICTED: uncharacterized protein LOC105111244 [Populus euphratica]	[more]
gi\|449447573\|ref\|XP_004141542.1\|	3.0e-52	37.40	PREDICTED: uncharacterized protein LOC101203805 isoform X1 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.088540.1	Cucsa.088540.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 359..363 scor
None	No IPR available	PANTHER	PTHR33646	FAMILY NOT NAMED	coord: 1..363 score: 4.3
None	No IPR available	PANTHER	PTHR33646:SF3	SUBFAMILY NOT NAMED	coord: 1..363 score: 4.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.088540	Cla011938	Watermelon (97103) v1	cgywmB101
Cucsa.088540	Csa2G401370	Cucumber (Chinese Long) v2	cgycuB090
Cucsa.088540	MELO3C008094	Melon (DHL92) v3.5.1	cgymeB100
Cucsa.088540	ClCG11G008410	Watermelon (Charleston Gray)	cgywcgB097
Cucsa.088540	CSPI02G24720	Wild cucumber (PI 183967)	cgycpiB093
Cucsa.088540	CmaCh04G030220	Cucurbita maxima (Rimu)	cgycmaB0171
Cucsa.088540	Lsi03G004780	Bottle gourd (USVL1VR-Ls)	cgylsiB098
Cucsa.088540	Cp4.1LG01g26300	Cucurbita pepo (Zucchini)	cgycpeB0164
Cucsa.088540	MELO3C008094.2	Melon (DHL92) v3.6.1	cgymedB099
Cucsa.088540	CsaV3_2G033240	Cucumber (Chinese Long) v3	cgycucB092
Cucsa.088540	Cla97C11G215140	Watermelon (97103) v2	cgywmbB097
Cucsa.088540	Bhi04G002074	Wax gourd	cgywgoB111
Cucsa.088540	Carg06095	Silver-seed gourd	carcgyB0016

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.088540	Silver-seed gourd	carcgyB1196
Cucsa.088540	Cucurbita maxima (Rimu)	cgycmaB0168
Cucsa.088540	Cucurbita moschata (Rifu)	cgycmoB0163
Cucsa.088540	Cucurbita moschata (Rifu)	cgycmoB0166
Cucsa.088540	Cucurbita pepo (Zucchini)	cgycpeB0162