Lsi03G004780 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi03G004780
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Actin-binding LIM protein 1, putative
Location	chr03 : 5431516 .. 5434686 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAAATCAAGTCCACAAAAAAGAAACCTCCCTCTACAAGAATAAAAGAGAAGCTTTTATTACTATCTATTTTGAAGTTGTATGTATTTTGTACAAGAACGGGATCGTGGATTTTGGTAGCAGATCTGTTGTTGTACTTGTTTTTTAACATTGTTTGATCAGATCTTTCGTTATTCCAATTTGCTTCGATTTCTAGGTTCATTGTTTAAAGAAGTCCTTGGCAAAGGTTTTATTTATGTATTTTCTTTCTTAATCACCAGCGATAATATTATACTTTCATTGATTAAAATTTTTGAACTTTCCCATTATGAATGAGAATTTGTATTAAGATTTGAAGGAGTTTGATTTGTTCAATATTTTGATTGTATTTAATTTTACAGACTAGCGGTAGCAGTTTGTATTATAAAACGGAAAAAGCAAGAAGAATAAAGATCTTTCCTTTCTAACAAAATGGTGGAGAAAGAGTGATGTCCCGGCAACGACGAACAAGGAATAACTGCCGTGCAACTTGTGGTGGGTTACCCATAAAAACCACTTTTTTTTTCCTTCACTTTTCTGTGGCCCGATCCGTCTCTCTCATTTCAATTTTCAATCAATTTTCAATCAATTTTCGTTGTTATAGAAGATTATAGATAGCGTTTGCCTTTTCCTAGTGTGATTCTCCAGAAGCCACCGCCATGGAGAATGAAGGTTCAGGAAGCGAATTCCAGGATTGGGAGGTTCTTCATGAGTATGACGAAACTTTCCTCCAAGTTAACTCCTCCAATTTTCCCGATTCGAACTCGAGGTTTTTTCAGGAAATTGAAGGCGATTCAGCCTCTGGAAGCACAATCTGGTTGGATTACTTCTCTCTTCGTAATCACGAACCGACTGCAAACACTGCCTTGAAGTCTACTCTAAGCAATGAATGTTTGGTCGAGGCAGAAAACCTCAACTCCATTGATTCTGAATCGGAGAATCGGAATTGTCACAAGAATATAAGTGAATTAGGGTCCGAGTTGGGAGACGACCTTTTGGACGAATATGAATTGAACCAATCTCATACGAACGATCTTTCAGATATTACTAAAAGCGTAACAGGTTTCGAAGAAATTTCAACCGACGCCGAGAATTTGGATAGACAGGAGGCCGATGATGGTAAATTGAAAGGCTCTCCTCTTGTTGCTACAGATGAATCGTTTTCTAGGAAGGAAATGTCTAACCCAACGGAATCCGAAGAATCTGGTGAAGAAAGTGAGAGCCAGGACGAGGTCTTGGACGACTCTTACTCTAATTCGAGTGGAAATGAGTCAGTTGCCATGAAATCTGTAGACGATGGAAAAGAGAACGATCATATAGACAGTGTAAATGAGATTTCGAACAATGATTTGGGTGGAGGAGATGGAGATTCGAGTGAGAAAATAGATGTGGCAATGGCAACGGCAATTGAAGAAGTGAAAGTAGAGGCAAAATCTGGTGAGTTAGAAGCACAGAGGAGGAGGGCTGTGTGGTGGAAGGTTCCTTTTCAGTTGTTGAGGTACTGCTTTTTAAGGACTAGCCCTGCCTGGTCCTTTTCTGTGGCTGCTGCTTTCATGGGAATGGTGATATTGGGACGTAGATTGTACAGGATGAAGAGGAAAGCCAAGAGTCTTCATTTGAAGATTGCTGTGGTTGATAAGGTTAGTTGTTGCTTCTTTTGATTATCATATTTTTGCAATTCTTGGGTGAAGTTCTTTTGTTTAATAGCCTCTTTGGAAGTAAGTAACATAGTGATTGAACATGTTTGGAGATCTAAGTTCAACTCTGAGAAACCTAATTTGTTTTCTGGGATGTCGTTCTTGTGATTGAGATGGTGTTGTTCTAAGCTTTTTTTGATTGTTTCAATAGGATAGCTTTCCTCTCAATGAAATTTCTTTCTTGGAAGAAGAATATTTTAGGACTTTGATTGACATTGAACGCACCTGTGATCCATCATAAATGCTCTCTATTAATTGTGATTTTTGTGTTGAAATTGATATGGACTATCTTGATTATCTGGGTTACCTATATTTGTCAACATGGACAAGTTCCACCATTGTAAATTGTTTGAGAAACGTTTTGGAACCTGGTAAAAACTAACCAAATTTTGTTGTTACTTCTGAAACTACCTTATTTTAATTATTTCTTGCTAAAGAACTCCTGTAGCCAGTGCCAAGAAACTTGACTCCTTTAGCTATTTTTGCGTTTTTTCTGCTTTTGATCGAACATTTTGGGAAGGAACTCCAGATGATTTAATGCCTAAACTTAAGGGTTGTATAAAGAGTCAAAAACCCTTTTGGTTTGGATTTTTTTTTGTTCCGATGGAATGTCAGAACTTTTTGTTGTTCTTGTATTCGTAGTGTCCGAGCCAACCTATGCAAATCTCGACTAATCTCACGGGACAACCTATCTGACCTTACAACATTTTGGTGTCAAGAAAACTCATAGAATATTAATTCTAAGTTGGTGTTTATCATGGATTTAATCCAATCCCTTTAAGTCCTTTGTTATATCAATTTTCTTTATTTACCACTAGGTCAACCTGTGATGATTGAGACGACAGAACTAAGAAATCTGAAAGTATAGTAGAATCAGTTAGAACTTTTAAAGATTGGGATGCAGTTGGATTATTGAATGAAAGGTTGTTAGTGGGTCAACTAGTCTAGATTAGAATAGAAACTTGCATTGCCTTGTGCGATGTATAAGTTCCTCATTATGAGTGATTGAGTAAAATAATAAGGTTTTGTCCCCTTCCCATATAATGATCCATATCATAGTCTGCAAAAGTTGATTGAATGGTGATAAAAACTTATACTGGTTGCACAACTTTTGTAGAAGGTATCGCAATTTGCAGATCAGGCTGCACGTTTGAACGAGGCCTTCTCGGTGGTGAGACGGGTGCCTGTGGTGAGAGCTCCATTGACAGGTGCAGGTGCAAGTTCTTGGCCTGCCATGAGTATGAGATGAAGTTTCTTGTATTCATTGAAATTTCAACTATTTCCAGTGTTCGAGGTCTGCATGTTTGTCATCATAAGTTATGTAACTGTGAAGTTCATAGGAAGTTTTTTTCCCTTTTTTTTTTTTTTGCGATGAATATGATTTATGTGTAAATGAAATATCTAAGCCTCTTCCTTCAACAATTACGTTTAAATATCTAGATTTTTGGATGATAA

mRNA sequence

CAAAAAATCAAGTCCACAAAAAAGAAACCTCCCTCTACAAGAATAAAAGAGAAGCTTTTATTACTATCTATTTTGAAGTTGTATGTATTTTGTACAAGAACGGGATCGTGGATTTTGACTAGCGGTAGCAGTTTGTATTATAAAACGGAAAAAGCAAGAAGAATAAAGATCTTTCCTTTCTAACAAAATGGTGGAGAAAGAGTGATGTCCCGGCAACGACGAACAAGGAATAACTGCCGTGCAACTTGTGTGTGATTCTCCAGAAGCCACCGCCATGGAGAATGAAGGTTCAGGAAGCGAATTCCAGGATTGGGAGGTTCTTCATGAGTATGACGAAACTTTCCTCCAAGTTAACTCCTCCAATTTTCCCGATTCGAACTCGAGGTTTTTTCAGGAAATTGAAGGCGATTCAGCCTCTGGAAGCACAATCTGGTTGGATTACTTCTCTCTTCGTAATCACGAACCGACTGCAAACACTGCCTTGAAGTCTACTCTAAGCAATGAATGTTTGGTCGAGGCAGAAAACCTCAACTCCATTGATTCTGAATCGGAGAATCGGAATTGTCACAAGAATATAAGTGAATTAGGGTCCGAGTTGGGAGACGACCTTTTGGACGAATATGAATTGAACCAATCTCATACGAACGATCTTTCAGATATTACTAAAAGCGTAACAGGTTTCGAAGAAATTTCAACCGACGCCGAGAATTTGGATAGACAGGAGGCCGATGATGGTAAATTGAAAGGCTCTCCTCTTGTTGCTACAGATGAATCGTTTTCTAGGAAGGAAATGTCTAACCCAACGGAATCCGAAGAATCTGGTGAAGAAAGTGAGAGCCAGGACGAGGTCTTGGACGACTCTTACTCTAATTCGAGTGGAAATGAGTCAGTTGCCATGAAATCTGTAGACGATGGAAAAGAGAACGATCATATAGACAGTGTAAATGAGATTTCGAACAATGATTTGGGTGGAGGAGATGGAGATTCGAGTGAGAAAATAGATGTGGCAATGGCAACGGCAATTGAAGAAGTGAAAGTAGAGGCAAAATCTGGTGAGTTAGAAGCACAGAGGAGGAGGGCTGTGTGGTGGAAGGTTCCTTTTCAGTTGTTGAGGTACTGCTTTTTAAGGACTAGCCCTGCCTGGTCCTTTTCTGTGGCTGCTGCTTTCATGGGAATGGTGATATTGGGACGTAGATTGTACAGGATGAAGAGGAAAGCCAAGAGTCTTCATTTGAAGATTGCTGTGGTTGATAAGAAGGTATCGCAATTTGCAGATCAGGCTGCACGTTTGAACGAGGCCTTCTCGGTGGTGAGACGGGTGCCTGTGGTGAGAGCTCCATTGACAGGTGCAGGTGCAAGTTCTTGGCCTGCCATGAGTATGAGATGAAGTTTCTTGTATTCATTGAAATTTCAACTATTTCCAGTGTTCGAGGTCTGCATGTTTGTCATCATAAGTTATGTAACTGTGAAGTTCATAGGAAGTTTTTTTCCCTTTTTTTTTTTTTTGCGATGAATATGATTTATGTGTAAATGAAATATCTAAGCCTCTTCCTTCAACAATTACGTTTAAATATCTAGATTTTTGGATGATAA

Coding sequence (CDS)

ATGGAGAATGAAGGTTCAGGAAGCGAATTCCAGGATTGGGAGGTTCTTCATGAGTATGACGAAACTTTCCTCCAAGTTAACTCCTCCAATTTTCCCGATTCGAACTCGAGGTTTTTTCAGGAAATTGAAGGCGATTCAGCCTCTGGAAGCACAATCTGGTTGGATTACTTCTCTCTTCGTAATCACGAACCGACTGCAAACACTGCCTTGAAGTCTACTCTAAGCAATGAATGTTTGGTCGAGGCAGAAAACCTCAACTCCATTGATTCTGAATCGGAGAATCGGAATTGTCACAAGAATATAAGTGAATTAGGGTCCGAGTTGGGAGACGACCTTTTGGACGAATATGAATTGAACCAATCTCATACGAACGATCTTTCAGATATTACTAAAAGCGTAACAGGTTTCGAAGAAATTTCAACCGACGCCGAGAATTTGGATAGACAGGAGGCCGATGATGGTAAATTGAAAGGCTCTCCTCTTGTTGCTACAGATGAATCGTTTTCTAGGAAGGAAATGTCTAACCCAACGGAATCCGAAGAATCTGGTGAAGAAAGTGAGAGCCAGGACGAGGTCTTGGACGACTCTTACTCTAATTCGAGTGGAAATGAGTCAGTTGCCATGAAATCTGTAGACGATGGAAAAGAGAACGATCATATAGACAGTGTAAATGAGATTTCGAACAATGATTTGGGTGGAGGAGATGGAGATTCGAGTGAGAAAATAGATGTGGCAATGGCAACGGCAATTGAAGAAGTGAAAGTAGAGGCAAAATCTGGTGAGTTAGAAGCACAGAGGAGGAGGGCTGTGTGGTGGAAGGTTCCTTTTCAGTTGTTGAGGTACTGCTTTTTAAGGACTAGCCCTGCCTGGTCCTTTTCTGTGGCTGCTGCTTTCATGGGAATGGTGATATTGGGACGTAGATTGTACAGGATGAAGAGGAAAGCCAAGAGTCTTCATTTGAAGATTGCTGTGGTTGATAAGAAGGTATCGCAATTTGCAGATCAGGCTGCACGTTTGAACGAGGCCTTCTCGGTGGTGAGACGGGTGCCTGTGGTGAGAGCTCCATTGACAGGTGCAGGTGCAAGTTCTTGGCCTGCCATGAGTATGAGATGA

Protein sequence

MENEGSGSEFQDWEVLHEYDETFLQVNSSNFPDSNSRFFQEIEGDSASGSTIWLDYFSLRNHEPTANTALKSTLSNECLVEAENLNSIDSESENRNCHKNISELGSELGDDLLDEYELNQSHTNDLSDITKSVTGFEEISTDAENLDRQEADDGKLKGSPLVATDESFSRKEMSNPTESEESGEESESQDEVLDDSYSNSSGNESVAMKSVDDGKENDHIDSVNEISNNDLGGGDGDSSEKIDVAMATAIEEVKVEAKSGELEAQRRRAVWWKVPFQLLRYCFLRTSPAWSFSVAAAFMGMVILGRRLYRMKRKAKSLHLKIAVVDKKVSQFADQAARLNEAFSVVRRVPVVRAPLTGAGASSWPAMSMR

Homology

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BLAST of Lsi03G004780 vs. TrEMBL
Match: A0A0A0LQL9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G401370 PE=4 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 1.9e-133
Identity = 271/366 (74.04%), Postives = 300/366 (81.97%), Query Frame = 1


Query: 9   EFQDWEVLHEYDETFLQVNSSNFPDSNSRFFQEIEGDSASGSTIWLDYFSLRNHEPTANT 68
           EF DWE+LHEYD TF Q  SSN P SNS F +E EGDS + STI LDYFSLRNHE +  T
Sbjct: 4   EFHDWELLHEYDPTFPQPYSSNLPYSNSTFSKEFEGDSGTESTICLDYFSLRNHESSPKT 63

Query: 69  ALKSTLSNECLVEAENLNSIDSESENRNCHKNISELGSELGDDLLDEYELNQSHTNDLSD 128
            LK T++N CLVE ENL+S+DS SE R+C KN SE GS+LGDDLL E ELNQSH N    
Sbjct: 64  PLKFTVTNGCLVEIENLSSVDSGSEIRSCRKNTSEFGSDLGDDLLGECELNQSHENGPLG 123

Query: 129 ITKSVTGFEEISTDAENLDRQEADDGKLKGSPLVATDESFSRKEMSNPTESEESGEESES 188
           ITKSV GFEEIS + ENLDR+E DDG+LKGSPLVA DE    K+  +PTESEE  EESES
Sbjct: 124 ITKSVAGFEEISIEDENLDRRETDDGELKGSPLVARDELLRVKDTYDPTESEEPREESES 183

Query: 189 QDEVLDDSYSNSSGNESVAMKSVDDGKEN----DHIDSVNEISNNDLGGGDGDSSEKIDV 248
           QDE+LDD+YSN SGNES AMKS DDGKEN    DHI+SVN+ISNN+    D DSSEKIDV
Sbjct: 184 QDEILDDTYSNWSGNESFAMKSGDDGKENDAGSDHIESVNDISNNE----DEDSSEKIDV 243

Query: 249 AMATAIEEVKVEAKSGELEAQRRRAVWWKVPFQLLRYCFLRTSPAWSFSVAAAFMGMVIL 308
           AM  A+EEVKVEAKSGELEAQR +AVWWKVPFQ+LRYCFLR SPAWSFSVAAAFMGM+IL
Sbjct: 244 AM--AVEEVKVEAKSGELEAQRTKAVWWKVPFQVLRYCFLRASPAWSFSVAAAFMGMMIL 303

Query: 309 GRRLYRMKRKAKSLHLKIAVVDKKVSQFADQAARLNEAFSVVRRVPVVRAPLTGAGASSW 368
           GR+LY+MKRKAKSLH KIAV DK+VS FAD+AARLNEAFSVVRRVPVVR PLTG GA+SW
Sbjct: 304 GRKLYKMKRKAKSLHSKIAVNDKRVSHFADRAARLNEAFSVVRRVPVVRGPLTGGGANSW 363

Query: 369 PAMSMR 371
           PAMSMR
Sbjct: 364 PAMSMR 363

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BLAST of Lsi03G004780 vs. TrEMBL
Match: A0A0A0KUS6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G648750 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 9.8e-50
Identity = 148/369 (40.11%), Postives = 202/369 (54.74%), Query Frame = 1


Query: 7   GSEFQDWEVLHEYDETFLQVNSSNFPDSNSRFFQEIEGDSASGSTIWLDYFSLRNHEPTA 66
           G+E QDWEVL         + ++ F    S  F  IEG+S S S I  DYFSL N     
Sbjct: 6   GAEIQDWEVLLHDLNPETALTAAEFSGEKSTHFGGIEGESDSDSIIKSDYFSLDNQGRRG 65

Query: 67  NTALKSTLSNE-CLVEAENLNSIDSESENRNCHKNISELGSELGDDLLDEYELNQSHTND 126
            T  +  L+ E   VE++N + ID  SENR    N SEL S+ G D  DE + N+  +  
Sbjct: 66  RTVPERDLNEEEGSVESDNPSWIDPSSENRYGRVNSSELWSDSGSDRSDERKFNELDSKA 125

Query: 127 LSDITKSVTGFEEISTDAENLDRQEADDGKLKGS-PLVATDESFSRKEMSNPTESEESGE 186
            S I  S  G EE+S     L+  ++ + K+ GS P +                 E  G 
Sbjct: 126 ESGIAGSFQGDEELSGRILKLESLKSHENKITGSDPNIEVGLE------------EFDGI 185

Query: 187 ESESQDEVLDDSYSNSSGNESVAMKS----VDDGKENDHIDSVNEISNNDLGGGDGDSSE 246
           +S+S+D    +S+ + SG + V   S    +++GKE  H+D +  +              
Sbjct: 186 QSQSKDL---NSFWSDSGEDIVQNGSKVVKLEEGKE--HLDEIKNLQ------------- 245

Query: 247 KIDVAMATAIEEVKVEAKSGELEAQRRRAVWWKVPFQLLRYCFLRTSPAWSFSVAAAFMG 306
                    IEE KV A+SG     +R+ +WWKVPF++L+YC  + SP WSFS+AAA MG
Sbjct: 246 ---------IEETKVNAESGSEVGDKRKVIWWKVPFEVLKYCLFKASPVWSFSIAAALMG 305

Query: 307 MVILGRRLYRMKRKAKSLHLKIAVVDKKVSQFADQAARLNEAFSVVRRVPVVRAPLTGAG 366
            ++LGRRLYR+KRK++SLHLK+ + +KK SQF  +AARLNEAFSVVRRVP+VR  L  AG
Sbjct: 306 FIVLGRRLYRIKRKSQSLHLKVILDEKKGSQFLSRAARLNEAFSVVRRVPIVRPALPAAG 335

Query: 367 ASSWPAMSM 370
            + WPAMSM
Sbjct: 366 INPWPAMSM 335

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BLAST of Lsi03G004780 vs. TrEMBL
Match: B9SHN5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0741630 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.6e-44
Identity = 152/374 (40.64%), Postives = 199/374 (53.21%), Query Frame = 1


Query: 1   MENEGSGSEFQDWEVLHEYDETFLQVNSSNFPDSNSRFFQEIEGDSASGSTIWLDYFSLR 60
           ME E SG EFQDWE+L   D   +   +S    +NSR  +EIE DS     + LDYFSL 
Sbjct: 1   MEGEVSG-EFQDWELLVNSDTDMVHSPNSV---NNSRNLEEIEADSEG--VLRLDYFSLE 60

Query: 61  NHEPTANTALKSTLSNECLVEAENLNSIDSESENR-NCHKNISELGSELGDDLLDEYELN 120
           N    A TA     S+E  VE++N + ID   E R N   N  E  S+ G D  DE + +
Sbjct: 61  NDSRYAKTAAVVDASDEGSVESDNPSWIDPGPETRYNQITNSGEFWSDSGSDRSDERKAS 120

Query: 121 QSHT-NDLS--DITKSVTGFEEISTDAENLDRQEADDGKLKGSPLVATDESFSRKEMSNP 180
                N+L   D  K   GF+ I      ++ ++  +GK          ESF    +SN 
Sbjct: 121 DFDVKNELGVVDNVKMEGGFQGIG----EIECKDDTEGKF---------ESF-EGSLSNL 180

Query: 181 TESEESGEESESQDEVLDDSYSNSSGNESVAMKSVDDGKENDHIDSVNEISNNDLGGGDG 240
               E G          ++S  N  G               D +D+++   + DLG  + 
Sbjct: 181 EGKNEMG---------FEESLKNEMGT-------------GDFVDNLS--MDKDLGESNV 240

Query: 241 DSSEKIDVAMATAIEEVKVEAKSGELEAQRRRAVWWKVPFQLLRYCFLRTSPAWSFSVAA 300
           ++S K D     A+ E     K  E + ++R+ VWWKVPF+LLRYC  R SP W+FS+AA
Sbjct: 241 ENSSKEDNLSVVAVVE-----KKSEGDEEKRKVVWWKVPFELLRYCVFRISPVWTFSMAA 300

Query: 301 AFMGMVILGRRLYRMKRKAKSLHLKIAVVDKKVSQFADQAARLNEAFSVVRRVPVVRAPL 360
           A MG VILGRRLY+MKRK +SL LK+ V DKKVSQF  +AARLNEAFSVVRRVP+VR  L
Sbjct: 301 AVMGFVILGRRLYKMKRKTRSLPLKVTVDDKKVSQFMSRAARLNEAFSVVRRVPIVRPLL 325

Query: 361 TGAGASSWPAMSMR 371
              G +SWP M++R
Sbjct: 361 PAGGVNSWPVMTLR 325

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BLAST of Lsi03G004780 vs. TrEMBL
Match: V4T3Z3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020185mg PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 6.2e-44
Identity = 149/376 (39.63%), Postives = 209/376 (55.59%), Query Frame = 1


Query: 5   GSGSE-FQDWEVLHEYDETFLQVNSSNFPDSNSRFFQEIEGDSASGSTIWLDYFSLRNHE 64
           G+G E FQ+WE+L   D     VNS N P  + R F+EIEGD + G  I  DYFS+ N +
Sbjct: 82  GAGGELFQEWELLQNTDSDV--VNSEN-PVESQRSFEEIEGDYSEGM-IRADYFSIDNEK 141

Query: 65  PTANTALKSTLSNECLVEAENLNSIDSESENRNCHKNISELGSELGDDLLDEYELNQ-SH 124
               T+L   +S E  VE++N + ID  SE +   KN     S+ G D  DE +      
Sbjct: 142 RHVKTSL--VVSEEGSVESDNPSWIDPGSETQYQRKNSGGFWSDSGSDRSDERKYGAFDG 201

Query: 125 TNDLSDIT--KSVTGFEEISTDAENLDRQEADDGKLKGSPLVATDESFSRKEMSNPTESE 184
            N+L  +   K+  GFE I       +R    D  +K       +E    +      + +
Sbjct: 202 RNELGFVENLKNGVGFEGIG------ERGIGADNLMKFGDFDLRNELGFDESTKGQVDFK 261

Query: 185 ESGEESESQDEVLDDSYSNSSGNESVAM--KSVDDGKE---NDHIDSVNEISNN-DLGGG 244
             G   +   ++    +S+S G+  V+M  + V  G E    DH+D  +E     +  GG
Sbjct: 262 GIGVVQDQNKDLGSRFWSDSGGDGLVSMSFEGVGKGSEVSFGDHVDKQDESETCVEFEGG 321

Query: 245 DGDSSEKIDVAMATAIEEVKVEAKSGELEAQRRRAVWWKVPFQLLRYCFLRTSPAWSFSV 304
           +G   E  +VA    IEE +   KS   + +R+R  WWKVPF++L+YC L+ +P WSFS+
Sbjct: 322 NGSMEENSNVA----IEESRAGEKSAG-DGERKRVAWWKVPFEVLKYCVLKVNPVWSFSM 381

Query: 305 AAAFMGMVILGRRLYRMKRKAKSLHLKIAVVDKKVSQFADQAARLNEAFSVVRRVPVVRA 364
           AAA MG+VILGRRLY+MK+K+++L LK+ + DKKVSQF  +AARLNEAFSVVRRVP+VR 
Sbjct: 382 AAAVMGLVILGRRLYKMKQKSRNLQLKVTLDDKKVSQFRSRAARLNEAFSVVRRVPIVRP 440

Query: 365 PLTGAGASSWPAMSMR 371
            L   GA+ WP MS+R
Sbjct: 442 ALPVPGANPWPVMSLR 440

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BLAST of Lsi03G004780 vs. TrEMBL
Match: A0A061FIG4_THECC (Actin-binding LIM protein 1, putative OS=Theobroma cacao GN=TCM_036302 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.3e-43
Identity = 154/384 (40.10%), Postives = 208/384 (54.17%), Query Frame = 1


Query: 9   EFQDWEVLH--EYDETFLQVNSSNFPDSNSRFFQEIEGDSASGSTIWLDYFSLRNHEPTA 68
           E  DWEVL   + D   + VNS        R  +EIEGD+     I  DYFSL N    A
Sbjct: 4   ELLDWEVLQNSDSDSNSIVVNSPEL-----RNLEEIEGDT--DGMIRSDYFSLDNQSMYA 63

Query: 69  NTALKSTLSNECLVEAENLNSIDSESENRNCHKNISELGSELGDDLLDEYELNQSHT-ND 128
                   S E  VE++N + ID   E R   KN+ E  S+ G D  D+ + N S   N+
Sbjct: 64  KVG---DASEEGSVESDNPSWIDPGPETRYERKNLGEFWSDSGSDRSDDRKFNDSDVKNE 123

Query: 129 LSDITKSVTGFEEISTDAENLDRQEA---DDGKLKGSPLVATDESFSRKEMSNPTESEES 188
           L  +       E+   D E +   EA   + GKLK       D  FS  +          
Sbjct: 124 LGFVEN-----EKPPVDFEGIGEMEAKSENSGKLKPD-----DSKFSDLDGKKGL----G 183

Query: 189 GEESESQDEVLDDSYSNSSGNESVAMKSVDDGKEND-----------HIDSVNEISNN-- 248
             E + QD+ L   +S+S G + ++MK  DD KE D            +++  E+ +   
Sbjct: 184 FGEIQVQDKDLGKFWSDSGG-DGISMKFEDDEKEGDIGFGDFMKKGAEVENSGELDDGNG 243

Query: 249 ---DLGGGDGDSSEKIDVAMATAIEEVKVEAKSGELEAQRRRAVWWKVPFQLLRYCFLRT 308
              +L GG+G+   +ID   AT I+E+K+  KS + E +++R VWWKVPF+LLRYC  + 
Sbjct: 244 STVELEGGEGN---QIDTEGAT-IDEMKLCVKSVD-EGEKKRVVWWKVPFELLRYCVFKV 303

Query: 309 SPAWSFSVAAAFMGMVILGRRLYRMKRKAKSLHLKIAVVDKKVSQFADQAARLNEAFSVV 368
           SP WSFSVAAA MG  ILG RLY+MKRK+++L LK+ + DKKVSQF  +AARLNEAFSVV
Sbjct: 304 SPVWSFSVAAAVMGFAILGHRLYKMKRKSRNLPLKVTMDDKKVSQFMTRAARLNEAFSVV 357

Query: 369 RRVPVVRAPLTGAGASSWPAMSMR 371
           RRVP++R  L+ AG + WP MS+R
Sbjct: 364 RRVPIIRPSLSTAGVNPWPVMSLR 357

[Close]

BLAST of Lsi03G004780 vs. TAIR10
Match: AT4G10080.1 (AT4G10080.1 unknown protein)

HSP 1 Score: 121.7 bits (304), Expect = 9.5e-28
Identity = 98/269 (36.43%), Postives = 141/269 (52.42%), Query Frame = 1


Query: 110 DDLLDEYELNQSHTNDLSDITKSVTGFEEISTDAENLDRQEADDGKLKGSPLVATDESFS 169
           D  LD++ ++QS      D  ++  G  +  T           DG+++ S   A +E + 
Sbjct: 73  DSGLDQFSVSQSG----DDCVRNEFGVYDSETGI-------LGDGEVRLSDFEAANEKYV 132

Query: 170 RKEMSNP-TESEESGEESESQDEVLDDSYSNSSGNESVAMKSVDDGKENDHIDSVNEISN 229
             E +   T    S  E+E+ +E +D  +     NES   + ++D  +       NE+ +
Sbjct: 133 ESEAATELTGGTVSHYETENLEEFVDGRHGE---NESGVEEPIEDSSKLCSDLGGNELVS 192

Query: 230 NDLGGGDGDSSEKID--VAMATAIE-----EVKVEAKSGELEAQRRRAVWWKVPFQLLRY 289
            D G  +G+     D  VA +  IE      V+V   S   E + R  VWWK+PF LL+Y
Sbjct: 193 RDSGVVNGEKEVVSDSVVASSEVIEGSGGDTVEVGGVSSGGEGKSRETVWWKMPFVLLKY 252

Query: 290 CFLRTSPAWSFSVAAAFMGMVILGRRLYRMKRKAKSLHLKIAVVDKKVSQFADQAARLNE 349
              R  P WS S+AAA MG+V+LGRRLY MK+KA+  HLK+ + DKK S+   QAARLNE
Sbjct: 253 SVFRIGPVWSVSMAAAVMGLVLLGRRLYNMKKKAQRFHLKVTIDDKKASRVMSQAARLNE 312

Query: 350 AFSVVRRVPVVRAPLTGAGASSWPAMSMR 371
            F+ VRRVPV+R  L   GA  WP +S+R
Sbjct: 313 VFTEVRRVPVIRPALPSPGA--WPVLSLR 325

[Close]

BLAST of Lsi03G004780 vs. TAIR10
Match: AT4G13530.1 (AT4G13530.1 unknown protein)

HSP 1 Score: 106.7 bits (265), Expect = 3.1e-23
Identity = 91/262 (34.73%), Postives = 144/262 (54.96%), Query Frame = 1


Query: 119 NQSHTNDLSDITKSVTGFEEISTDAEN-LDRQEA--DDGKLK-GSP---LVATDESFSRK 178
           N     ++ D T+ +  F+  S + ++ L R EA  +DG ++ GSP     ++D  +  K
Sbjct: 22  NSRSLEEIDDGTQGMIRFDHFSLENQSGLSRLEANDEDGSVQSGSPGWIEPSSDVPYGPK 81

Query: 179 EMSNPTESEESGEESESQDEVLDDSYSNSSGNESVAMKSVDDGKENDHIDSVNEISNNDL 238
             S    S+ S +  + Q  ++DD  +N  G E   +  V+      + +S+ +  + DL
Sbjct: 82  HFSE-LWSDSSSDRLDDQ-RLVDDDVNNEMGIERNEVGIVE------YSESIAQ--DMDL 141

Query: 239 GGGDGDSSEKIDVAMATAIEEVKVE--AKSGELEAQRRRAVWWKVPFQLLRYCFLRTSPA 298
              D    E +   +      V ++   KSG    + +  VWWK+P ++L+YC L+ +P 
Sbjct: 142 ISSDERKEESLLHPVEGEGNSVSIDPGVKSGGGGGEEKGFVWWKIPIEVLKYCVLKINPI 201

Query: 299 WSFSVAAAFMGMVILGRRLYRMKRKAKSLHLKIAVVDKKVSQFADQAARLNEAFSVVRRV 358
           WS S+AAAF+G V+LGRRLY MK+K +SL LK+ + DKKV   A+ AAR NEA SVV+RV
Sbjct: 202 WSLSMAAAFVGFVMLGRRLYNMKKKTRSLQLKVLLDDKKV---ANHAARWNEAISVVKRV 261

Query: 359 PVVRAPL-TGAGASSWPAMSMR 371
           P++R  L +  G + W  MS+R
Sbjct: 262 PIIRPALPSSVGMNQWSMMSLR 270

[Close]

BLAST of Lsi03G004780 vs. NCBI nr
Match: gi|659081151|ref|XP_008441179.1| (PREDICTED: uncharacterized protein LOC103485392 isoform X1 [Cucumis melo])

HSP 1 Score: 526.6 bits (1355), Expect = 3.6e-146
Identity = 288/366 (78.69%), Postives = 318/366 (86.89%), Query Frame = 1


Query: 9   EFQDWEVLHEYDETFLQVNSSNFPDSNSRFFQEIEGDSASGSTIWLDYFSLRNHEPTANT 68
           EFQDWE+LHEYD TF Q  SSN PDSNSRFFQEIEGDS S STI LDYFSLR HEP++ T
Sbjct: 63  EFQDWELLHEYDRTFPQPYSSNLPDSNSRFFQEIEGDSGSESTICLDYFSLRKHEPSSKT 122

Query: 69  ALKSTLSNECLVEAENLNSIDSESENRNCHKNISELGSELGDDLLDEYELNQSHTNDLSD 128
            LKST+++ECLVE ENL+S+DS SENR+C KN SE+GS+LG+DLL E ELNQSH N L D
Sbjct: 123 PLKSTVTDECLVEPENLSSVDSGSENRSCRKNTSEIGSDLGNDLLGECELNQSHANGLLD 182

Query: 129 ITKSVTGFEEISTDAENLDRQEADDGKLKGSPLVATDESFSRKEMSNPTESEESGEESES 188
           ITKSV GFEEISTDAENL+R+EADDG+LKGSPLVA DE    K+  NPTESEES EESES
Sbjct: 183 ITKSVAGFEEISTDAENLNRREADDGELKGSPLVARDEPLRGKDTYNPTESEESSEESES 242

Query: 189 QDEVLDDSYSNSSGNESVAMKSVDDGKE----NDHIDSVNEISNNDLGGGDGDSSEKIDV 248
           QDE+LDD+ SN SGN S AMK+ DDGKE    NDHI+SVN+ISNN    GDGDSSEKIDV
Sbjct: 243 QDEILDDTCSNWSGNMSFAMKAGDDGKENDAGNDHIESVNDISNN----GDGDSSEKIDV 302

Query: 249 AMATAIEEVKVEAKSGELEAQRRRAVWWKVPFQLLRYCFLRTSPAWSFSVAAAFMGMVIL 308
           AM  A+EEVKVEAKSGELEAQRR+AVWWKVPFQ+LRYCFLR SPAWSFSVAAAFMG++IL
Sbjct: 303 AM--AVEEVKVEAKSGELEAQRRKAVWWKVPFQVLRYCFLRASPAWSFSVAAAFMGVMIL 362

Query: 309 GRRLYRMKRKAKSLHLKIAVVDKKVSQFADQAARLNEAFSVVRRVPVVRAPLTGAGASSW 368
           GRRLY+MKRKAKSLHLKIAV DK VSQFAD+AARLNEAFSVVRRVPVVRAPLTG GA+SW
Sbjct: 363 GRRLYKMKRKAKSLHLKIAVNDKNVSQFADRAARLNEAFSVVRRVPVVRAPLTGGGANSW 422

Query: 369 PAMSMR 371
           PA+SMR
Sbjct: 423 PALSMR 422

[Close]

BLAST of Lsi03G004780 vs. NCBI nr
Match: gi|659081153|ref|XP_008441180.1| (PREDICTED: uncharacterized protein LOC103485392 isoform X2 [Cucumis melo])

HSP 1 Score: 515.8 bits (1327), Expect = 6.4e-143
Identity = 285/366 (77.87%), Postives = 315/366 (86.07%), Query Frame = 1


Query: 9   EFQDWEVLHEYDETFLQVNSSNFPDSNSRFFQEIEGDSASGSTIWLDYFSLRNHEPTANT 68
           EFQDWE+LHEYD TF Q  SSN PDSNSRFFQEIEGDS S STI LDYFSLR HEP++ T
Sbjct: 63  EFQDWELLHEYDRTFPQPYSSNLPDSNSRFFQEIEGDSGSESTICLDYFSLRKHEPSSKT 122

Query: 69  ALKSTLSNECLVEAENLNSIDSESENRNCHKNISELGSELGDDLLDEYELNQSHTNDLSD 128
            LKST+++ECLVE ENL+S+DS SENR+C KN SE+GS+LG+DLL E ELNQSH N L D
Sbjct: 123 PLKSTVTDECLVEPENLSSVDSGSENRSCRKNTSEIGSDLGNDLLGECELNQSHANGLLD 182

Query: 129 ITKSVTGFEEISTDAENLDRQEADDGKLKGSPLVATDESFSRKEMSNPTESEESGEESES 188
           ITKSV GFEEISTDAENL+R+EADDG+LKGSPLVA DE    K+  NPTESEES EESES
Sbjct: 183 ITKSVAGFEEISTDAENLNRREADDGELKGSPLVARDEPLRGKDTYNPTESEESSEESES 242

Query: 189 QDEVLDDSYSNSSGNESVAMKSVDDGKE----NDHIDSVNEISNNDLGGGDGDSSEKIDV 248
           QDE+LDD+ SN SGN S AMK+ DDGKE    NDHI+SVN+ISNN    GDGDSSEKIDV
Sbjct: 243 QDEILDDTCSNWSGNMSFAMKAGDDGKENDAGNDHIESVNDISNN----GDGDSSEKIDV 302

Query: 249 AMATAIEEVKVEAKSGELEAQRRRAVWWKVPFQLLRYCFLRTSPAWSFSVAAAFMGMVIL 308
           AM  A+EEVKVEAKSGELEAQRR+AVWWKVPFQ+LRYCFLR SPAWSFSVAAAFMG++IL
Sbjct: 303 AM--AVEEVKVEAKSGELEAQRRKAVWWKVPFQVLRYCFLRASPAWSFSVAAAFMGVMIL 362

Query: 309 GRRLYRMKRKAKSLHLKIAVVDKKVSQFADQAARLNEAFSVVRRVPVVRAPLTGAGASSW 368
           GRRLY+MKRKAKSLHLKIAV DK    FAD+AARLNEAFSVVRRVPVVRAPLTG GA+SW
Sbjct: 363 GRRLYKMKRKAKSLHLKIAVNDK----FADRAARLNEAFSVVRRVPVVRAPLTGGGANSW 418

Query: 369 PAMSMR 371
           PA+SMR
Sbjct: 423 PALSMR 418

[Close]

BLAST of Lsi03G004780 vs. NCBI nr
Match: gi|449441782|ref|XP_004138661.1| (PREDICTED: uncharacterized protein LOC101221371 [Cucumis sativus])

HSP 1 Score: 483.8 bits (1244), Expect = 2.7e-133
Identity = 271/366 (74.04%), Postives = 300/366 (81.97%), Query Frame = 1


Query: 9   EFQDWEVLHEYDETFLQVNSSNFPDSNSRFFQEIEGDSASGSTIWLDYFSLRNHEPTANT 68
           EF DWE+LHEYD TF Q  SSN P SNS F +E EGDS + STI LDYFSLRNHE +  T
Sbjct: 4   EFHDWELLHEYDPTFPQPYSSNLPYSNSTFSKEFEGDSGTESTICLDYFSLRNHESSPKT 63

Query: 69  ALKSTLSNECLVEAENLNSIDSESENRNCHKNISELGSELGDDLLDEYELNQSHTNDLSD 128
            LK T++N CLVE ENL+S+DS SE R+C KN SE GS+LGDDLL E ELNQSH N    
Sbjct: 64  PLKFTVTNGCLVEIENLSSVDSGSEIRSCRKNTSEFGSDLGDDLLGECELNQSHENGPLG 123

Query: 129 ITKSVTGFEEISTDAENLDRQEADDGKLKGSPLVATDESFSRKEMSNPTESEESGEESES 188
           ITKSV GFEEIS + ENLDR+E DDG+LKGSPLVA DE    K+  +PTESEE  EESES
Sbjct: 124 ITKSVAGFEEISIEDENLDRRETDDGELKGSPLVARDELLRVKDTYDPTESEEPREESES 183

Query: 189 QDEVLDDSYSNSSGNESVAMKSVDDGKEN----DHIDSVNEISNNDLGGGDGDSSEKIDV 248
           QDE+LDD+YSN SGNES AMKS DDGKEN    DHI+SVN+ISNN+    D DSSEKIDV
Sbjct: 184 QDEILDDTYSNWSGNESFAMKSGDDGKENDAGSDHIESVNDISNNE----DEDSSEKIDV 243

Query: 249 AMATAIEEVKVEAKSGELEAQRRRAVWWKVPFQLLRYCFLRTSPAWSFSVAAAFMGMVIL 308
           AM  A+EEVKVEAKSGELEAQR +AVWWKVPFQ+LRYCFLR SPAWSFSVAAAFMGM+IL
Sbjct: 244 AM--AVEEVKVEAKSGELEAQRTKAVWWKVPFQVLRYCFLRASPAWSFSVAAAFMGMMIL 303

Query: 309 GRRLYRMKRKAKSLHLKIAVVDKKVSQFADQAARLNEAFSVVRRVPVVRAPLTGAGASSW 368
           GR+LY+MKRKAKSLH KIAV DK+VS FAD+AARLNEAFSVVRRVPVVR PLTG GA+SW
Sbjct: 304 GRKLYKMKRKAKSLHSKIAVNDKRVSHFADRAARLNEAFSVVRRVPVVRGPLTGGGANSW 363

Query: 369 PAMSMR 371
           PAMSMR
Sbjct: 364 PAMSMR 363

[Close]

BLAST of Lsi03G004780 vs. NCBI nr
Match: gi|449447573|ref|XP_004141542.1| (PREDICTED: uncharacterized protein LOC101203805 isoform X1 [Cucumis sativus])

HSP 1 Score: 205.7 bits (522), Expect = 1.4e-49
Identity = 148/369 (40.11%), Postives = 202/369 (54.74%), Query Frame = 1


Query: 7   GSEFQDWEVLHEYDETFLQVNSSNFPDSNSRFFQEIEGDSASGSTIWLDYFSLRNHEPTA 66
           G+E QDWEVL         + ++ F    S  F  IEG+S S S I  DYFSL N     
Sbjct: 6   GAEIQDWEVLLHDLNPETALTAAEFSGEKSTHFGGIEGESDSDSIIKSDYFSLDNQGRRG 65

Query: 67  NTALKSTLSNE-CLVEAENLNSIDSESENRNCHKNISELGSELGDDLLDEYELNQSHTND 126
            T  +  L+ E   VE++N + ID  SENR    N SEL S+ G D  DE + N+  +  
Sbjct: 66  RTVPERDLNEEEGSVESDNPSWIDPSSENRYGRVNSSELWSDSGSDRSDERKFNELDSKA 125

Query: 127 LSDITKSVTGFEEISTDAENLDRQEADDGKLKGS-PLVATDESFSRKEMSNPTESEESGE 186
            S I  S  G EE+S     L+  ++ + K+ GS P +                 E  G 
Sbjct: 126 ESGIAGSFQGDEELSGRILKLESLKSHENKITGSDPNIEVGLE------------EFDGI 185

Query: 187 ESESQDEVLDDSYSNSSGNESVAMKS----VDDGKENDHIDSVNEISNNDLGGGDGDSSE 246
           +S+S+D    +S+ + SG + V   S    +++GKE  H+D +  +              
Sbjct: 186 QSQSKDL---NSFWSDSGEDIVQNGSKVVKLEEGKE--HLDEIKNLQ------------- 245

Query: 247 KIDVAMATAIEEVKVEAKSGELEAQRRRAVWWKVPFQLLRYCFLRTSPAWSFSVAAAFMG 306
                    IEE KV A+SG     +R+ +WWKVPF++L+YC  + SP WSFS+AAA MG
Sbjct: 246 ---------IEETKVNAESGSEVGDKRKVIWWKVPFEVLKYCLFKASPVWSFSIAAALMG 305

Query: 307 MVILGRRLYRMKRKAKSLHLKIAVVDKKVSQFADQAARLNEAFSVVRRVPVVRAPLTGAG 366
            ++LGRRLYR+KRK++SLHLK+ + +KK SQF  +AARLNEAFSVVRRVP+VR  L  AG
Sbjct: 306 FIVLGRRLYRIKRKSQSLHLKVILDEKKGSQFLSRAARLNEAFSVVRRVPIVRPALPAAG 335

Query: 367 ASSWPAMSM 370
            + WPAMSM
Sbjct: 366 INPWPAMSM 335

[Close]

BLAST of Lsi03G004780 vs. NCBI nr
Match: gi|778707879|ref|XP_011656079.1| (PREDICTED: uncharacterized protein LOC101203805 isoform X2 [Cucumis sativus])

HSP 1 Score: 203.8 bits (517), Expect = 5.4e-49
Identity = 148/369 (40.11%), Postives = 203/369 (55.01%), Query Frame = 1


Query: 7   GSEFQDWEVLHEYDETFLQVNSSNFPDSNSRFFQEIEGDSASGSTIWLDYFSLRNHEPTA 66
           G+E QDWEVL         + ++ F    S  F  IEG+S S S I  DYFSL N     
Sbjct: 6   GAEIQDWEVLLHDLNPETALTAAEFSGEKSTHFGGIEGESDSDSIIKSDYFSLDNQGRRG 65

Query: 67  NTALKSTLSNE-CLVEAENLNSIDSESENRNCHKNISELGSELGDDLLDEYELNQSHTND 126
            T  +  L+ E   VE++N + ID  SENR    N SEL S+ G D  DE + N+  +  
Sbjct: 66  RTVPERDLNEEEGSVESDNPSWIDPSSENRYGRVNSSELWSDSGSDRSDERKFNELDSKA 125

Query: 127 LSDITKSVTGFEEISTDAENLDRQEADDGKLKGS-PLVATDESFSRKEMSNPTESEESGE 186
            S I  S  G EE+S     L+  ++ + K+ GS P +                 E  G 
Sbjct: 126 ESGIAGSFQGDEELSGRILKLESLKSHENKITGSDPNIEVGLE------------EFDGI 185

Query: 187 ESESQDEVLDDSYSNSSGNESVAMKS----VDDGKENDHIDSVNEISNNDLGGGDGDSSE 246
           +S+S+D    +S+ + SG + V   S    +++GKE  H+D +  +              
Sbjct: 186 QSQSKDL---NSFWSDSGEDIVQNGSKVVKLEEGKE--HLDEIKNLQ------------- 245

Query: 247 KIDVAMATAIEEVKVEAKSGELEAQRRRAVWWKVPFQLLRYCFLRTSPAWSFSVAAAFMG 306
                    IEE KV A+SG     +R+ +WWKVPF++L+YC  + SP WSFS+AAA MG
Sbjct: 246 ---------IEETKVNAESGSEVGDKRKVIWWKVPFEVLKYCLFKASPVWSFSIAAALMG 305

Query: 307 MVILGRRLYRMKRKAKSLHLKIAVVDKKVSQFADQAARLNEAFSVVRRVPVVRAPLTGAG 366
            ++LGRRLYR+KRK++SLHLK+ ++D+K SQF  +AARLNEAFSVVRRVP+VR  L  AG
Sbjct: 306 FIVLGRRLYRIKRKSQSLHLKV-ILDEKGSQFLSRAARLNEAFSVVRRVPIVRPALPAAG 334

Query: 367 ASSWPAMSM 370
            + WPAMSM
Sbjct: 366 INPWPAMSM 334

The following BLAST results are available for this feature:

BLAST of Lsi03G004780 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi03G004780 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQL9_CUCSA	1.9e-133	74.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G401370 PE=4 SV=1	[more]
A0A0A0KUS6_CUCSA	9.8e-50	40.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G648750 PE=4 SV=1	[more]
B9SHN5_RICCO	3.6e-44	40.64	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0741630 PE=4 SV=1	[more]
V4T3Z3_9ROSI	6.2e-44	39.63	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020185mg PE=4 SV=1	[more]
A0A061FIG4_THECC	2.3e-43	40.10	Actin-binding LIM protein 1, putative OS=Theobroma cacao GN=TCM_036302 PE=4 SV=1	[more]

BLAST of Lsi03G004780 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G10080.1	9.5e-28	36.43	unknown protein	[more]
AT4G13530.1	3.1e-23	34.73	unknown protein	[more]

BLAST of Lsi03G004780 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659081151\|ref\|XP_008441179.1\|	3.6e-146	78.69	PREDICTED: uncharacterized protein LOC103485392 isoform X1 [Cucumis melo]	[more]
gi\|659081153\|ref\|XP_008441180.1\|	6.4e-143	77.87	PREDICTED: uncharacterized protein LOC103485392 isoform X2 [Cucumis melo]	[more]
gi\|449441782\|ref\|XP_004138661.1\|	2.7e-133	74.04	PREDICTED: uncharacterized protein LOC101221371 [Cucumis sativus]	[more]
gi\|449447573\|ref\|XP_004141542.1\|	1.4e-49	40.11	PREDICTED: uncharacterized protein LOC101203805 isoform X1 [Cucumis sativus]	[more]
gi\|778707879\|ref\|XP_011656079.1\|	5.4e-49	40.11	PREDICTED: uncharacterized protein LOC101203805 isoform X2 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G004780.1	Lsi03G004780.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33646	FAMILY NOT NAMED	coord: 1..370 score: 5.1
None	No IPR available	PANTHER	PTHR33646:SF3	SUBFAMILY NOT NAMED	coord: 1..370 score: 5.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi03G004780	Csa2G401370	Cucumber (Chinese Long) v2	culsiB115
Lsi03G004780	CSPI02G24720	Wild cucumber (PI 183967)	cpilsiB113
Lsi03G004780	Cucsa.088540	Cucumber (Gy14) v1	cgylsiB098
Lsi03G004780	CmaCh04G030220	Cucurbita maxima (Rimu)	cmalsiB656
Lsi03G004780	Cla011938	Watermelon (97103) v1	lsiwmB275
Lsi03G004780	MELO3C008094	Melon (DHL92) v3.5.1	lsimeB259
Lsi03G004780	ClCG11G008410	Watermelon (Charleston Gray)	lsiwcgB227
Lsi03G004780	MELO3C008094.2	Melon (DHL92) v3.6.1	lsimedB272
Lsi03G004780	Cla97C11G215140	Watermelon (97103) v2	lsiwmbB224
Lsi03G004780	Bhi04G002074	Wax gourd	lsiwgoB322
Lsi03G004780	Cp4.1LG01g26300	Cucurbita pepo (Zucchini)	cpelsiB339
Lsi03G004780	CsGy2G024450	Cucumber (Gy14) v2	cgyblsiB102
Lsi03G004780	Carg06095	Silver-seed gourd	carlsiB017
Lsi03G004780	CsaV3_2G033240	Cucumber (Chinese Long) v3	cuclsiB127

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi03G004780	Cucurbita maxima (Rimu)	cmalsiB276
Lsi03G004780	Cucurbita moschata (Rifu)	cmolsiB265
Lsi03G004780	Cucurbita moschata (Rifu)	cmolsiB645
Lsi03G004780	Cucurbita pepo (Zucchini)	cpelsiB143
Lsi03G004780	Cucurbita pepo (Zucchini)	cpelsiB171
Lsi03G004780	Cucurbita pepo (Zucchini)	cpelsiB454
Lsi03G004780	Silver-seed gourd	carlsiB986