CsaV3_2G002630 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GCCGAGCCCAAATGCTGCTTCCCTTATTGGATCACTACAAAATTTTGGTATACACAAAGTTTAGACATTTTTTTTCTTTTGGAATTTGGGTTAGACGTAGATCTCCTATTTCATTTATTTACCTTTGTAGATAAACTGTGTTCAACCTACACTTACTTTTACTTTTACCTTTACCTTTATACATATGGTTCCTATAACTACATACGAAAATGTGACAACTAAGTAAAATTTATATAAAAGAAAATTCAATGACAAAGTTGGTTTAAACTTTTACTGAACCGTTGGTTCGTATGTTGGGTTTGGTTTGGTTGGGTGAACCCACGGTTTTAGAAGTGAATTAGGTTCGAGACAGAGAGGGGTCGTGAATGAAACGAAACTAATTACCACTTTTTTCCATTCCCGCGGGCTGAAGCTGAAAGTTGTTTTCCCAAAAGCCGCTGGTTCCACCTCCGCCATGGCCCCGCCGCCCGTCGATCCCAGTTCTCGGTCAGTCTTTCAATTACTCTTCTCTGTTTCTTCATAGATGTCCTCGATTCATTTTCATTCTCGTTTGTTTCCATTTTCTGAATCTCCCCATGTGAAAATTCTCTCCTTCTTTTCTTCTGAAAAGGGAGGCTTTTCCGAGGAAGCAATCGGCCCCATACAAGTTCTTGGTTCCTCTCGTTTACGCCCCTGTTCTTCCTCTCAGTAAGTTCAATTTTCTGAGGTTTTCGTTTTTTTTTTTTTTTCTTTTTTTGAGCATTTCTGGTTTTTTTTTTCATCTGAGTTTTGTTCGAACGAGATTCTAAATTTGTGGGACTATTTTGTTTTGTTTTTTCAGTTAGAATTGCGCTGCGGAAAAACCCTGTTGTGAGGGATCGGCTGTTCACGGCGGTTTTGGCTGGTGCTTTTGCCCATGGCTTTTACTTGGTGTATCCTCTTGACCCTTATATTTGCTTTTATCATTGCCCCTATCATATTGAATTCACATTCTTGAATCTTGCGATTTCCATGTTTCTCTGTTCATTTGTTGATGATATCAATATGCATCCGCTGTTCTGTAAATTTATCTTCTTATCTAAGAATTTTTATGTTTGGTCCACCATTGGTTGCTATGTATTGTAGAACCGAATTGGTCACGAAGAAAAGGGGATTTGGCTACATTTTGGTGGGGTATTTAGACTAATGTGGAGTTGGAAATTAACGTAGTCTAAGTTCAAAAGTTTTCAGAGTTTTTGATTGATCCTATTAACTACAAAAGTATTGCAGAAATTGTTGATTTTGATTTCTCTGAGAAATGTGATTTCTCATCATTCTTAGAGTCCGTGAGTATTATGGGCCCTTGGAAAAGGCACAGATGTAAATTACTACTTGATTAACGTCTAGCCGATTAGTCATACAAGTGAAAATCTGAGGAGGAATGAAATCACTATGACTTGGCCTACTCGTCAAAAAGAGCCATACAAATAATAAAGAGCTTAGAGGGAATAAGATCAAGTCACCTTAGTCACCTACCTAATATTTTATACCCGACAAGTTACCTTTTCATGGAACCAAATGTAGTTGGGTTAAACAGTTGACTTGTAAGAATAGTCCAAATAAGCGCAAGCTAGCTTGGACTCTCATGTATGTGTGTGTGTATTCATAAGGTAGGAGGTTAGAGTTTAATTTCGGGGAATTATGTGCTACTTCATAAGGGACGTTCATAGGTTGCTCTGTCAATTTGCTGGGTTTCTAAATAGGTTGCTCTGTCAATTTGCTGGGTTTCTAAATGTTGTTTAGCAATTGACCATGTGATCAAGACTTGGACACAAGTGATGTCCCTTGAGATTTGCTGCTCGTTTTAAAGATAAGCTAGCAATTTCCGAGGTTATTGCTTATTGTCAAAGAGTAACATTATGGGCTCAAGTTTGAAGTCCTCTTTACCGTAGAAAATTGAGTTGTGTTCTTAGCCAAAACTTGTCCACGTTGGTATTCTCACGTTCAATTCCTGCCTGTAACTTAGAAATCCCTCACACTTGAGATCTAGAAAAGTATTATTTGAAGCCTTGTACGTTTGGTCCTTACAAACTCATTGGCCAACAAGTTCTATGGGAATGCTCGTAAATATTCGGGCATTTGTCCTTGCTTGCAATGAAACTTTTCCCAATGACATAATGTAGAAGGTAATAGTATGTATTATGTGATTGATGTTCTCCTTGCTATTGCTTGATTGAATTCCTCTTCACTTTATCCATGTTGGAGCTTAAACTTTCCTCAAACATGAGGTGGATTTTTTTTTAATGGTTTTAAAATTTTAAAATATAATTAAATTGTTCAATTACAAAATTGAGTTGTGTTCCTTGATGAGTATGATCAGAACTGATATCTACGATGCTGAGAGCAAGTAAGCTCATTTTTCCCACCATCACCTGATGTTTGCTGAGAGATCATTATTTACTCCTTTTTCTTTTTCTTTTACTCAATAATTCATCCTATCATTTTTCTTCACTTGTTATTATCACTGGAACAATGGATTAAACTTTACCTGAGGATTTCTGACGGCTAGTTAAGACTTTAGAGTTGTGTTGGAAATAATTACTCAAACCACACATCAAGTTTTGGGGTCCCATTACAAGTTGTTA ATGGCCCCGCCGCCCGTCGATCCCAGTTCTCGGGAGGCTTTTCCGAGGAAGCAATCGGCCCCATACAAGTTCTTGGTTCCTCTCGTTTACGCCCCTGTTCTTCCTCTCATTAGAATTGCGCTGCGGAAAAACCCTGTTGTGAGGGATCGGCTGTTCACGGCGGTTTTGGCTGGTGCTTTTGCCCATGGCTTTTACTTGGTAACTGATATCTACGATGCTGAGAGCAAGTAA ATGGCCCCGCCGCCCGTCGATCCCAGTTCTCGGGAGGCTTTTCCGAGGAAGCAATCGGCCCCATACAAGTTCTTGGTTCCTCTCGTTTACGCCCCTGTTCTTCCTCTCATTAGAATTGCGCTGCGGAAAAACCCTGTTGTGAGGGATCGGCTGTTCACGGCGGTTTTGGCTGGTGCTTTTGCCCATGGCTTTTACTTGGTAACTGATATCTACGATGCTGAGAGCAAGTAA MAPPPVDPSSREAFPRKQSAPYKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK
BLAST of CsaV3_2G002630 vs. NCBI nr
Match: XP_004139325.2 (PREDICTED: uncharacterized protein LOC101204118 [Cucumis sativus] >KGN60655.1 hypothetical protein Csa_2G006000 [Cucumis sativus]) HSP 1 Score: 152.5 bits (384), Expect = 5.7e-34 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0
BLAST of CsaV3_2G002630 vs. NCBI nr
Match: XP_008457941.1 (PREDICTED: uncharacterized protein LOC103497503 [Cucumis melo]) HSP 1 Score: 147.9 bits (372), Expect = 1.4e-32 Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0
BLAST of CsaV3_2G002630 vs. NCBI nr
Match: XP_022938302.1 (uncharacterized protein LOC111444436 [Cucurbita moschata]) HSP 1 Score: 137.1 bits (344), Expect = 2.5e-29 Identity = 66/72 (91.67%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of CsaV3_2G002630 vs. NCBI nr
Match: XP_022966034.1 (uncharacterized protein LOC111465738 [Cucurbita maxima] >XP_023536899.1 uncharacterized protein LOC111798144 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 137.1 bits (344), Expect = 2.5e-29 Identity = 66/72 (91.67%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of CsaV3_2G002630 vs. NCBI nr
Match: XP_022143221.1 (uncharacterized protein LOC111013138 [Momordica charantia]) HSP 1 Score: 128.6 bits (322), Expect = 8.9e-27 Identity = 64/72 (88.89%), Postives = 67/72 (93.06%), Query Frame = 0
BLAST of CsaV3_2G002630 vs. TAIR10
Match: AT1G68680.1 (unknown protein) HSP 1 Score: 102.1 bits (253), Expect = 1.6e-22 Identity = 50/70 (71.43%), Postives = 56/70 (80.00%), Query Frame = 0
BLAST of CsaV3_2G002630 vs. TrEMBL
Match: tr|A0A0A0LF45|A0A0A0LF45_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006000 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 3.8e-34 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0
BLAST of CsaV3_2G002630 vs. TrEMBL
Match: tr|A0A1S3C7Y6|A0A1S3C7Y6_CUCME (uncharacterized protein LOC103497503 OS=Cucumis melo OX=3656 GN=LOC103497503 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 9.4e-33 Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0
BLAST of CsaV3_2G002630 vs. TrEMBL
Match: tr|A0A022QI52|A0A022QI52_ERYGU (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a017412mg PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 1.9e-25 Identity = 60/76 (78.95%), Postives = 68/76 (89.47%), Query Frame = 0
BLAST of CsaV3_2G002630 vs. TrEMBL
Match: tr|A0A2P4LDX5|A0A2P4LDX5_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_52043 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 8.8e-23 Identity = 57/72 (79.17%), Postives = 66/72 (91.67%), Query Frame = 0
BLAST of CsaV3_2G002630 vs. TrEMBL
Match: tr|A0A2C9VN89|A0A2C9VN89_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G052500 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 8.8e-23 Identity = 59/72 (81.94%), Postives = 64/72 (88.89%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |