Cp4.1LG07g09880 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG07g09880
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	SH3 and FCH domain-containing protein DDB_G0271676
Location	Cp4.1LG07 : 8977953 .. 8987388 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGTGTTTTTTTTTATCCTTGAGTTACCATTAACAATAGTTGAATAAGGTATGGAGAGTGACAAGTGCTCGATATCCTCTAATTTATGCTTCTTCTTGCTTATGCCTTTAGCACATGCTATCTCTGCAGAACATGTCCTGCTTCCTGTTTACAACAAATATTACAACCTTCATTCAATTGTTTTTTCTCTCATCATCATGTTTCCTTACCCTACCATTAACTTCTCTCCTTCTTTCTCTCTCTTGTTCTTTCAAATTATCTCTTTTTTGTATGCAAATAAACATGATGGTCTGTTTCCCTTGATGAGTCCCAATCTTCACAATTAGTACCCCATTCCCCACCATTCTTTTAAAAATTTGGAGTATGTGAGGGTAGATGGGTTGAAGGGAATAAAAACATTGGTAAAAAGCTTGAGAAATTTCCTCACTTGGATCGAGTCATTATGTCTTGCTTTGGAATGCTCAAAGGGCTCAACTTGGCAGCTGTTGTCTTCAAAGACATAGGCATATGGGCTATGAAAACTCATCAAAGAAAGCCACAAGGCACACATAATAACTTGAAAACAAATAGAAATCTGGTCAATGAATTGAAATTACCCTAGATTTAGGTTTTTTCTTTTTGGTTTATGTAATAGGCCGGTCCAAGCCCACTTCTAATAGATATTGTTCTTTTTGGGCTTTACTGGCCTTCACTTAAAAATTTTAAAAGTGTCTAGTATGGAGAGGGTTCTACAGGAATGATTTGTTTCTTTTTGTAATTGATGTGGGATCTCACAATACACTAGGTGGTGTGTCAGCGAAGACATTAGACCCCGAAGGGGGTGGATTATGAGATCTCACATCGATTGGAAAGAAGAATGAGTGTCAGCAAGGACGTTGGGTTCCGAAAGGGGTGGATTATGAGGCTCCCACACCCTTATAAAAAAATGTTTTGTTCCTCTCTCCAATTGATGTGGAATCTCACAATACACTAGGTGGTGTGTCAACGAAGCCGTTGGGCTCGAAGGGAGGTGGGTTGTGAGATCCCACATCGATTGGAGAGAGGAACGAGTGTCAGCAAAGACGTTGGGTTTCGAAGGGAGTGGATACTGAGGCTTCCACACGCTTATAAAAAAAATGTTTTGTTCCACTCTCCAATCGATGTGGGATCTCACAATACACTAGACGGTGTGTCAGCGAAGTTGTTGGGTCCCGAATAGGGGTGGATTGTGAGATCCCACATCGATTGGAGAGATGAACGAGTGTTAGCAAAGATGTTGGATCTCAGAGGGGGTGGATTGTGAGATCCCACATCGATTGGAGAGAAGAACGAGTGTCAGCGAGGACATTGGACCTCGAAGGGGATGAATTGTGAGATCCCACATTGATTGGAGAGAAGAACGAGTGTCAGTGAGAACGTTGGACCTTGAAGGGGGTGGATTGTGAGATCCCACATCGATTGGAGAGAAAAACAAGTGTCAACGAGGACGTTGGACCCAAAGAGGGTGGATTGTGAGATCCCACATCAATTAGAGAGAAGAACAAGTGTCAATGAGGACGTTGGACCCCAAAGGGGGTGGATTGTGAGAATCCCACATTGATTAGAAGAGTGAGTGTCAGCGAGGACATTAGACCTTCAAGGGAGTGGATTGTGAGATCCCACATCGATTGAAAAGAAGAACGAGTGTCAACGAGGACGTTGAACCCTGAAAGAGGGTGAACTGTGAGATGTCACATTGGTTGGAGAGGGGAACGAAACATTTTTTACAAGGGTGTGAAAACCTCTCCCTAACCGATGTAGTTTAAAAACTTTGAGGGAAAGTTCGAAAGTAAAATCCCAGACAGACAATATCTGCTAACGGTGGCGGGCGGTTACACTTTGACATCCATAATTCTTCTCTCACTAATTCACCATCTTATCTCATCATTTGCTTATACCAACAACCAGCAGGTAGCTAGCTACCAAATTGAAAGCAAAACAAGGCCCATTCATGATAATTAAACAAAGCATCAGAGAAAGCCAGGATATCAAAACACATATAGAAGGAGACCCTTTGAAAGACACACTTTGTGATATCAATTTTTAGGCATTGCCCAAAAAATGAGACTCAGCTGCCACTGCCACTGCCTACCGACACTGAAAACCACTCATTTTGCCCTTAAAAACCTTCAATTTCATCTACTCTCTCTTTCACTTTCGGACCATTTAATTTGATAGGGTAATGAAGCTGAATCCCCCACCTTCTAGGGTTTTTGGACACTGTCCTTTTTGGATCCGCCCCACATAATGTAAACATGATGGCAATGTTCAACATCCCCTAATTCATATATTTGAGGTTAATTCTAATTTGGAAATTATTTCTTTTATGACTCCAATGGGGTACCCTACAAATGAAAGGGAAGGTTGTCCATAGAGTTTCACAATTGTGACGATTCTGTTCTCGTTAGGTCTCTTAACGTAATGTTGCACCTATGTTGGTCATGTCTCGTACCTTAATAACATTTTAGTACACCATTTGCTAGCAAACACCTAAATCTACCAATTCCCGTTTGTAATTCTAATAGATGATCTTTGTCGGTAAATCCATTAGTTTAAATTTTGTATCTAATACATCACTGTTCTTACTTCCCTCCCCTAAACGTTTATGCTACCCTAATGGCCTAAACCTACTTAGATCCCACATGAGACCATCTTCTATCCTCTAACTAACACAATCAATTTACTATGTTGGTATTAAACAAGATCCGTCATATTATCCTTTTTCGGATTTCCCTTTCAAGCTTCCTTCAAAGTTTTTATAACGCCATTGCTAGGAAGAGGTTTTCACGCCCTTATAAATGATGTTTCGTTCTCCTCCCTAACCGATGTGAGATCCCACAATCCATCTCCCTTCAGGGCCCATCATCCTCAGTGGCACTCATTCCCTTCTCCAATCGATGTGGGACCTGGGTTTTTTGGGCTTTCTCTTTCGAACTTCCCCTCAAAGTTTTTAAGATGCGTATGTTAGAGAGAGATTTCCACATCCTTATAAAAAAAAATGTTTCATTATCCTCCTAAAACGATGTGGGATCTCACCGTTTAAATTACGAAAGTCGACTATTTGACACAATCTTCGAAGTTGAAAGACTAATTACGAGCTTTTCAAAGAAAAGGAATTGAATAAGAAGAGGTAGAAGGTTAAACACAACCAAAGATGTGTGATGATTTAGTGGGGAAAACGAAAGAGGTAGAAGGTTTGGGAGATGGGGTTGAAGCCGACACCGACAAGGACAAGGACAAGTCCTACAATAATAAAAAGAAAGAGAAAGGTGGGCCTTGTGAAGGGGTGAAGAAGATGAGATAATAAGGGTAGGGGGAGGCATTGTTGGGTGATTTGGAGGGTAAGTGAGAGACCCAAAAACAAGTGGGAATGTGTGATATTTGTACTTGTTCATTGATGATCATGTTATTCAAAACCATGTGGGTTTCACATGATTGGCACGAGCTGGCTAGGTTTTTGGTTATGTCGTGTTTCTTGTTCTTAAATGTTTTGTACTCCTAGTAGTTGCCTTTCTTTCTCTCCATTTTTAACTCTCTCTGTCCCCCATTAATGGCAGATTCAGGAACTTCACTGCCAAACCTCTGAGCCACCTTCTTCTCATCCATCGCTTTACATGTTTTTTCTTCGATATCGTTAAAAGTATCTAATAAGTTCTTGGAAATCTTGTATGAATTTAGCCTGTAATAGAACTCTAAGCTTTCTTTTTTCAACAAAAGTTGAACATGTCATGGCTCTATTAGATAAAAAAATTTAAAAACGTATATATTCAATAGTTTTTAAAGTTTCGAGACTAAATATATAAGAATTTGAAAACTTAGAGGTGAATTCTTGATGGAATTAGGGTAGTTGGCTACGGAGGCTGATCCAAGCCTTCTCCAAGCAGAATTCGTATTTTGGGTGAGTCTCGAAGACTTATTCTGACTGAAACTCTTAGCTATCGATGATTTGAGTTCCCTTGTTCAAATCAATATCTATGTCAAGCTTCCCACCTCTGAATTCAAATCCACTGGCAATGAGAATCCCAAATCGAATTTTTTGAATAACATATCGAGAGATAATTGGATTTGTACCAATTGTTTACTTACAATGGCTTGAACGAATCCGACACTCTTTCTGTTGAAAATTGTGATATCCCACATTGGTTGGAGAGGAGAACGTGAACCTTTCCGTTTTAAAGCCTTCAGGGGATGCTTGAAAGGGAAAGCTCAAAGAGGACAAGATATGTCAGCGGTAGACTTGGGCCGTTACAAATGATATAAGAGTCAGACATCGGACAATGTGCCAACGAAAAGGCTGTTTCCCAAAGGGGTAGACACGAGGCGGTGTGCCAATAAGGACGTTGGGCCCAAAAGTAGGTGGATTTGGCAGGGATCCCACATCAATTGGAGAAAGAAACGAGTGTGACACGAGGACGTTGAGCCCAAAGAGGACAATAAGGGTAAACATTGAGAAGTCACTTTTAAATTCTTTGACTTTCTCAGTAATAAAACCTTTGACTTTTGTATTTGTTTGAATTTCTTATATTTATAATTTTATAGAAATATCTATCGACGTTAATATTGACATCGATCAATTCATAATTTAATATTTTTCCATTAATGTATGGTTTTGCAAATCATATTACTTAAAAATTTTAACATTTCTTCACGGCCCAGCCCAAAGTGCTGCTTCTTGGTTTGGATCACTTCATAAATTTGGACCAACGGACCAATTTTTGGTGTAGCGCTTAACAAATAAGCAGATCTGATCAGCTGTAATCCTAGATTTTGTAGTTCCATTCCTGTGGGCTGAAGTTGATTTTCCAATAGCCGCCGCCGCCGCCCGCCGCCGCTCCTCCGCCATGGCCTCCCCCTACGATCCCACTTCTCGGTCAGTCTATGCAAATTCCTTCTCTGTTTTCTCATAGATGTTCGATTCATGTTCATTCGCATTAATATCGCTTATTGTTGAAAAAGGGAGGCGTTTCCTAAGAAGAAATCAGCCCCATTCAAGTTCTTGGTTCCTCTCATCTATGCCCCTGTTCTTCCTCTCAGTAAGTTTAATTTTCTGGGTTTCTCTTTTTTTCGATCATTTTGGATGATTTTCAATCTGGGTTTGTTCGAATTTGAGTTTAAATTATGTTTTTCAGTTAGAATTGCGCTGCGGAAGAATCCTGTTGTGAGGGATCGGCTTTTCACGGCGGTTTTAGCTGGTGCTTTTGCCCATGGCTTTTACCTGGTGTATCCTTTTATCTCTTGCATTTTCTTTGATCATTGTTCATATCATATTGCATTGCGAATTCTTGAATCTTGTGATTTCAATGTTTGTCCGTTTGGTTGTTGTTGATCTGAGAATTGTGTCTCATCATCATTTAGCTTAGAGTTTGAAATGAAATGGAGTAGTGTTACGGATTTGTTGATTTCGATTGATCTGTGCGATTACCAGTGATTTTGGCTTCATGCAAGCTAGTTGCAACCTACAATCCGGACTAGGGATGGGGTTTTGGGGTTATCTCACCCTCGTAGGTTCACGACCTTTTGTCCTAGCCATTGTAGCATTAGGGATGGGTTTTTGGAGTTAGCTCACCCTCACAGGGTCACAACCCTTTGTACCAGCCCTTCTAGCATTAGGGATGAGTTTTTGGAGTTAGCTCACCCTCGTAGGGTCATGACCCTTTGTCCCAGCCATTATAGCAATAGGGATGGGTTTTGGAGCTAGCTCACCCTTGCATGGTCACGACCCTTTGTCTTAGCCATTGTAGCATTAGGGATGAGTTTTTGGAGTTAGCTCACCTTCGTAGGGTCATGACCCTTTGTCACAGCCATTGTAGCATTAAGGATGGGTTTTTGGAGTTAGCTCACTCTTTCAGGGTCACAACCCTTTATCCCAGCCATTGTAGCATTAGGGACAGGTTTTTGGAGTTAGCTCACCGGGGACAGGTTTTTGGAGTTAGCTCACCCTTGCACGGTCACAACCCTTTGTACCAACCATTGTAGCATTAGGGATGGGTTTTTGGAGTTAGCTAACCTGTGCAAGGTCATGACCCTTTGTCCCCGCCATTGTAGCATTATGGATGGGTTTTGGAGTTAGCTCACCCTTGAAGGGTCACGACCCTTTGTCTATCCATTGTAGCATTATGGATGGGTTTTGGAGTTAGCTCATCCTTGCAGGGTTACGACCCTTTGTCCTAGCCATTATAGCATTAGGGATGGTTTTTTGGAGTTAGCTCACCCTTGCAGAGTCACGACCCTTTGTACCAGCCATTGTAGCATTAGGGACGGGTTTTTGGAGTTAGCTTACCCTTGCAGAGTCACGACCCTTTATACCAGCCATTGTAGCATTAGGGACGGGTTTTGGTGTTAGCTCACCCTTGCAGAGTCACAACCCTTTGTACCAGCCATTGTAGCATTAGAGACGGGTTTTTGGAGTTAGCTCACCCTTGCAAAGTCATGACCCTTTATCCCAACCATTCTAGCATTATGGATGGGTTTTGGAGTTAGCTCACCCTTGCAGGGTTACGACCCTTTGTCCCAGCCATTATAGCATTAGGTATGGTTTTTTGGAGTTAGCTCACCCTTGCAGAGTCACAACCCTTTGTACCAGCCATTGTAGCATTAGGGACGGGTTTTTGGAGTTAGCTTACCCTTGCAGAGTCACGACCCTTTATACCAGCCATTGTAGCATTAGGGACGGGTTTTGGTGTTAGCTCACCCTTGCAGAGTCACAACCCTTTGTACCAGCCATTGTAGCATTAGAGACGGGTTTTTGGAGTTAGCTCACCCTTGCAAAGTCATGACCCTTTATCCCAACCATTCTAGCATTATGGATGGGTTTTGGAGTTAGCTCACCCTTGCAGGGTTACGACCCTTTGTCCCAGCCATTATAGCATTAGGTATGGTTTTTTGGAGTTAGCTCACCCTTGCAGAGTCACAACCCTTTGTACCAGCCATTGTAGCATTAGGGACGGGTTTTTGGAGTTAGCTCACCCTCGCAGAATCCCGACCCTTTGTACCAGCCATTGTAGCATTAGGGACAGGTTTTTGGTGTTAGCTCACCCTTCAAGAGTCACAACCCTTTGTACCAGCCATTGTAGCATTAGGGACGGGTTTTTGGAGTTAGCTCACCCTTGCAAGGTCATGACCCTTTATCCCAACCATTCTAGCATTATGGATGGGTTTTGGAGTTAGCTCACCCTTGCAGGGTCACGACCCTTTGCCCCAGCCAGCCATTGTAGCATGTGCTTTCTCACCGATCTTTGAGTTTGTGAGTGCATAGGCTGTTGGGAAAGCCACCAATGCATATTACCATTGGATGAACATGTAGGTCAATCGTGGAGAATGTGGTTACTTTTAGGCATGATTGTCTAGTGTCTCGAGACTTAAGCGATAGCTCCCGAGACGTATCCATAGGTTTTTTAAGAGAAGCTCCATGGTTATTGCTTATTGTCGAATAGTTACATCCCGTGTGCAAGTCAGAACACTTCTCTCTACCAAAGACATTTAGTTATGTTTTATAGCCAAACGTCATCCCGAACTTAAGCTCGGGAAAAGGATTATTTGGAGCCTTGTGCATTTGGCTCTTGCAATCTCATTAAGCAACGAGTTGCGTGGAAACGCTTGTAAATACTCGAGCGTTGGTCTTTGCTTGTCGTGAAACTTCTCGGAAAGACATACGATGGTAGTTTTGAAATTTGGTTTAGAATTCAAACGCTTATAAAATAAAAGCTATTCCATTTGCATTGTCATTCATTTTATGTATAATATGCGAGTTCCTTGACGTTTGGATGTTCAGAACTGATATCTACGACGCCGAGAGCAAGTGATCCTTGGATACCCATAATTCTTTAGTATCATAGCTTACTCCAATGGTAATAAATACAGTACATTATTGATGGATGCTCTTTGTTTACTCAGTCTCTGAGCACTCTGCCTTTGAAAATTTTGTGTATTACTTGCTACACTTCATTATTGTTCAAATCAATTAATGCTTTCCTTTTTCTTCATTTTTGTATTACCTGTCTTCATGGATATAGTATATTACATATTACATCGTGCATAACTCCCATGCAAACAAGATATGTTCTTTAGAACATAACTAATAAGAGAGAACAAGAATCATTGTCTCTTCCTATATCCTACATCGGTTGGAGAGGAGAACGAAACATTCCTATGAAGATGTGGAAATCTCTCTCTAGTAGACGCGTTTTAAAACTGTGAAGCTGAAGGCGATGTGTATCGGGCTAAAACGGATAATATTTGCTAGTAGTGGGCTTGGGTTGTTACAGATGGTATTAGAGTCAGGCATCGAGCGGTGTGCTAATGAGGATGTTGGGTCCTTAAGGGGGTGGATTGTGAGATCCCACATCAGTTGGAGAGGGGAACGAAACATTCCTTATAAGGGTGTGGAAACATCTCCCTAGTAGATGCGTTTTAAAACCATGAGGCTGACGACGATACGTAACGGTTAAAGCGGATAATGTCTGCGAGCCATTTGTAACAGTCCAAACCCACTGTTAGCAGATATTGTCATCTTCGGGCTTCCTCTCAAGGTTTTTAAAATTTGTCTGCTAGGGAGAGGTTTCCACACCCTTATAATGGGTGTTTCGGTCTTCTCCCCAACCGATGTGGGACCCCAAATCCACCACTCTTCAAGGCCCAACGTTCTCGCTGGCACTCGTTCATTTCTTCAATCGAAGTGGGACCCCTCAATCCACCCCTTTGGAGCCCACCATCCTTGTTGGCACATTGTCTCATGTCCACCCACCTTCAGGGCTTAGCCTCCTAGCTGACACATCGCTCGGTGTCTAGTTCTGATATCATTTGTAATAGCCTAAGCCCATCGTTAGCTGATATTATCCTCTCTGAACTTTTCCGGTTGGTGTGCTTTTGGCAAAAGGCATCCAACCAACCCCTTTCGATCTTTAACTGCACCATCTTCCTTTGGTAGGTCCCTAAAAAGATGCTAAAAATCACTTTTTTAGCCTACTTGGTGAGCTAACGTTGGCAATGTGTCACGCACACCATGTTTGATGAGTTGTGTATGGAAAAAGTGCCATATCCTCGTGACACTTTGTGTTGGATACTCTTTGTTGCACTTTGCCCACAATCCTCCTCGTGTATTCCTTGTGCCTTCACAAGCCCTACCAGTTAACTTTTCCCTCTATTTAAACCCCCTTCTCTCATTCTTTATCAATAACTCAATAACTCAATCCAAATTGCTATCACTTATCCTCTCTCTCAACATGGCTCTCGTTTCTAAGTCCATTGATTCAACGATGAGGAATCATGTGTATGGAGATGTCGAACATAGACAATTTTTTTCTCCAACGTTTGTCTTAGGACAAGAAGGAGATGATGACGACGACGATGATGGAAGCTACGACTATGCTCCAGCAGCATGAGCCTGTAGTTGTCGAGCTTAAGAATAGACGTTGA

mRNA sequence

ATGGTTCCATTCCTGTGGGCTGAAGTTGATTTTCCAATAGCCGCCGCCGCCGCCCGCCGCCGCTCCTCCGCCATGGCCTCCCCCTACGATCCCACTTCTCGGGAGGCGTTTCCTAAGAAGAAATCAGCCCCATTCAAGTTCTTGGTTCCTCTCATCTATGCCCCTGTTCTTCCTCTCATTAGAATTGCGCTGCGGAAGAATCCTGTTGTGAGGGATCGGCTTTTCACGGCGGTTTTAGCTGGTGCTTTTGCCCATGGCTTTTACCTGGACAAGAAGGAGATGATGACGACGACGATGATGGAAGCTACGACTATGCTCCAGCAGCATGAGCCTGTAGTTGTCGAGCTTAAGAATAGACGTTGA

Coding sequence (CDS)

ATGGTTCCATTCCTGTGGGCTGAAGTTGATTTTCCAATAGCCGCCGCCGCCGCCCGCCGCCGCTCCTCCGCCATGGCCTCCCCCTACGATCCCACTTCTCGGGAGGCGTTTCCTAAGAAGAAATCAGCCCCATTCAAGTTCTTGGTTCCTCTCATCTATGCCCCTGTTCTTCCTCTCATTAGAATTGCGCTGCGGAAGAATCCTGTTGTGAGGGATCGGCTTTTCACGGCGGTTTTAGCTGGTGCTTTTGCCCATGGCTTTTACCTGGACAAGAAGGAGATGATGACGACGACGATGATGGAAGCTACGACTATGCTCCAGCAGCATGAGCCTGTAGTTGTCGAGCTTAAGAATAGACGTTGA

Protein sequence

MVPFLWAEVDFPIAAAAARRRSSAMASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLDKKEMMTTTMMEATTMLQQHEPVVVELKNRR

Homology

[Close]

BLAST of Cp4.1LG07g09880 vs. TrEMBL
Match: A0A0A0LF45_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G006000 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.3e-23
Identity = 56/62 (90.32%), Postives = 61/62 (98.39%), Query Frame = 1


Query: 28 PYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGF 87
          P DP+SREAFP+K+SAP+KFLVPL+YAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGF
Sbjct: 5  PVDPSSREAFPRKQSAPYKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGF 64

Query: 88 YL 90
          YL
Sbjct: 65 YL 66

[Close]

BLAST of Cp4.1LG07g09880 vs. TrEMBL
Match: A9PBA0_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.5e-18
Identity = 52/69 (75.36%), Postives = 55/69 (79.71%), Query Frame = 1


Query: 25 MASPYDPTSREAFP----KKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLA 84
          MASP DPT+ EA      KK   P KFLVPL+YAPVLPLIR+ LRKNPVVRDRLFTAVL 
Sbjct: 1  MASPSDPTNPEAAAAIRRKKNGPPIKFLVPLVYAPVLPLIRLTLRKNPVVRDRLFTAVLV 60

Query: 85 GAFAHGFYL 90
          GAFAHGFYL
Sbjct: 61 GAFAHGFYL 69

[Close]

BLAST of Cp4.1LG07g09880 vs. TrEMBL
Match: B9HZK4_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0011s00570g PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 9.4e-18
Identity = 58/87 (66.67%), Postives = 62/87 (71.26%), Query Frame = 1


Query: 10  DFPIAAAAARRRSSA---MASPYDPTSREAFP----KKKSAPFKFLVPLIYAPVLPLIRI 69
           D  I+A A    SS    MASP DPT+ EA      KK   P KFLVPL+YAPVLPLIR+
Sbjct: 18  DLRISAIAGIPLSSPPPLMASPSDPTNPEAAAAIRRKKNGPPIKFLVPLVYAPVLPLIRL 77

Query: 70  ALRKNPVVRDRLFTAVLAGAFAHGFYL 90
            LRKNPVVRDRLFTAVL GAFAHGFYL
Sbjct: 78  TLRKNPVVRDRLFTAVLVGAFAHGFYL 104

[Close]

BLAST of Cp4.1LG07g09880 vs. TrEMBL
Match: A0A059CP77_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C01298 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 9.4e-18
Identity = 51/67 (76.12%), Postives = 58/67 (86.57%), Query Frame = 1


Query: 25 MASPYDPTSREAFPKK--KSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGA 84
          MASP D +++EA  +K  K AP KFLVPLIYAPVLPLIR++LR+NPVVRDRLFT VLAGA
Sbjct: 1  MASPSDTSNQEAVVRKQNKGAPIKFLVPLIYAPVLPLIRLSLRRNPVVRDRLFTLVLAGA 60

Query: 85 FAHGFYL 90
          FAHGFYL
Sbjct: 61 FAHGFYL 67

[Close]

BLAST of Cp4.1LG07g09880 vs. TrEMBL
Match: A0A059CN17_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_C011091 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 9.4e-18
Identity = 51/67 (76.12%), Postives = 58/67 (86.57%), Query Frame = 1


Query: 25 MASPYDPTSREAFPKK--KSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGA 84
          MASP D +++EA  +K  K AP KFLVPLIYAPVLPLIR++LR+NPVVRDRLFT VLAGA
Sbjct: 1  MASPSDASNQEAVVRKQNKGAPIKFLVPLIYAPVLPLIRLSLRRNPVVRDRLFTLVLAGA 60

Query: 85 FAHGFYL 90
          FAHGFYL
Sbjct: 61 FAHGFYL 67

[Close]

BLAST of Cp4.1LG07g09880 vs. TAIR10
Match: AT1G68680.1 (AT1G68680.1 unknown protein)

HSP 1 Score: 86.7 bits (213), Expect = 1.1e-17
Identity = 45/65 (69.23%), Postives = 49/65 (75.38%), Query Frame = 1


Query: 25 MASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFA 84
          MAS  DP+      KKK AP KFLVPLIYAP LPLIR++LR  PV+RDRLF  VL GAFA
Sbjct: 1  MASSSDPSKPVMERKKKGAPIKFLVPLIYAPALPLIRLSLRHKPVLRDRLFGLVLVGAFA 60

Query: 85 HGFYL 90
          HGFYL
Sbjct: 61 HGFYL 65

[Close]

BLAST of Cp4.1LG07g09880 vs. NCBI nr
Match: gi|659071054|ref|XP_008457941.1| (PREDICTED: uncharacterized protein LOC103497503 [Cucumis melo])

HSP 1 Score: 117.5 bits (293), Expect = 1.6e-23
Identity = 60/66 (90.91%), Postives = 64/66 (96.97%), Query Frame = 1


Query: 25 MASP-YDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAF 84
          MASP  DP+SREAFP+K+SAPFKFLVPL+YAPVLPLIRIALRKNPVVRDRLFTAVLAGAF
Sbjct: 1  MASPPVDPSSREAFPRKQSAPFKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAF 60

Query: 85 AHGFYL 90
          AHGFYL
Sbjct: 61 AHGFYL 66

[Close]

BLAST of Cp4.1LG07g09880 vs. NCBI nr
Match: gi|778666021|ref|XP_004139325.2| (PREDICTED: uncharacterized protein LOC101204118 [Cucumis sativus])

HSP 1 Score: 115.9 bits (289), Expect = 4.8e-23
Identity = 56/62 (90.32%), Postives = 61/62 (98.39%), Query Frame = 1


Query: 28 PYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGF 87
          P DP+SREAFP+K+SAP+KFLVPL+YAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGF
Sbjct: 5  PVDPSSREAFPRKQSAPYKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGF 64

Query: 88 YL 90
          YL
Sbjct: 65 YL 66

[Close]

BLAST of Cp4.1LG07g09880 vs. NCBI nr
Match: gi|743913538|ref|XP_011000680.1| (PREDICTED: uncharacterized protein LOC105108179 [Populus euphratica])

HSP 1 Score: 98.6 bits (244), Expect = 7.9e-18
Identity = 52/69 (75.36%), Postives = 55/69 (79.71%), Query Frame = 1


Query: 25 MASPYDPTSREAFP----KKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLA 84
          MASP DPT+ EA      KK   P KFLVPL+YAPVLPLIR+ LRKNPVVRDRLFTAVL 
Sbjct: 1  MASPSDPTNPEAAAAIRRKKNGPPIKFLVPLVYAPVLPLIRLTLRKNPVVRDRLFTAVLV 60

Query: 85 GAFAHGFYL 90
          GAFAHGFYL
Sbjct: 61 GAFAHGFYL 69

[Close]

BLAST of Cp4.1LG07g09880 vs. NCBI nr
Match: gi|629115092|gb|KCW79767.1| (hypothetical protein EUGRSUZ_C011091, partial [Eucalyptus grandis])

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-17
Identity = 51/67 (76.12%), Postives = 58/67 (86.57%), Query Frame = 1


Query: 25 MASPYDPTSREAFPKK--KSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGA 84
          MASP D +++EA  +K  K AP KFLVPLIYAPVLPLIR++LR+NPVVRDRLFT VLAGA
Sbjct: 1  MASPSDASNQEAVVRKQNKGAPIKFLVPLIYAPVLPLIRLSLRRNPVVRDRLFTLVLAGA 60

Query: 85 FAHGFYL 90
          FAHGFYL
Sbjct: 61 FAHGFYL 67

[Close]

BLAST of Cp4.1LG07g09880 vs. NCBI nr
Match: gi|566192945|ref|XP_002316603.2| (hypothetical protein POPTR_0011s00570g, partial [Populus trichocarpa])

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-17
Identity = 58/87 (66.67%), Postives = 62/87 (71.26%), Query Frame = 1


Query: 10  DFPIAAAAARRRSSA---MASPYDPTSREAFP----KKKSAPFKFLVPLIYAPVLPLIRI 69
           D  I+A A    SS    MASP DPT+ EA      KK   P KFLVPL+YAPVLPLIR+
Sbjct: 18  DLRISAIAGIPLSSPPPLMASPSDPTNPEAAAAIRRKKNGPPIKFLVPLVYAPVLPLIRL 77

Query: 70  ALRKNPVVRDRLFTAVLAGAFAHGFYL 90
            LRKNPVVRDRLFTAVL GAFAHGFYL
Sbjct: 78  TLRKNPVVRDRLFTAVLVGAFAHGFYL 104

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g09880 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG07g09880 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LF45_CUCSA	3.3e-23	90.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G006000 PE=4 SV=1	[more]
A9PBA0_POPTR	5.5e-18	75.36	Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1	[more]
B9HZK4_POPTR	9.4e-18	66.67	Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0011s00570g P...	[more]
A0A059CP77_EUCGR	9.4e-18	76.12	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C01298 PE=4 SV=1	[more]
A0A059CN17_EUCGR	9.4e-18	76.12	Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_C011091 PE=4...	[more]

BLAST of Cp4.1LG07g09880 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68680.1	1.1e-17	69.23	unknown protein	[more]

BLAST of Cp4.1LG07g09880 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659071054\|ref\|XP_008457941.1\|	1.6e-23	90.91	PREDICTED: uncharacterized protein LOC103497503 [Cucumis melo]	[more]
gi\|778666021\|ref\|XP_004139325.2\|	4.8e-23	90.32	PREDICTED: uncharacterized protein LOC101204118 [Cucumis sativus]	[more]
gi\|743913538\|ref\|XP_011000680.1\|	7.9e-18	75.36	PREDICTED: uncharacterized protein LOC105108179 [Populus euphratica]	[more]
gi\|629115092\|gb\|KCW79767.1\|	1.3e-17	76.12	hypothetical protein EUGRSUZ_C011091, partial [Eucalyptus grandis]	[more]
gi\|566192945\|ref\|XP_002316603.2\|	1.3e-17	66.67	hypothetical protein POPTR_0011s00570g, partial [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009853	photorespiration
biological_process	GO:0008150	biological_process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
cellular_component	GO:0044444	cytoplasmic part
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g09880.1	Cp4.1LG07g09880.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37713	FAMILY NOT NAMED	coord: 26..116 score: 1.6
None	No IPR available	PANTHER	PTHR37713:SF1	SUBFAMILY NOT NAMED	coord: 26..116 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG07g09880	Cucsa.116100	Cucumber (Gy14) v1	cgycpeB0279
Cp4.1LG07g09880	CmaCh12G012270	Cucurbita maxima (Rimu)	cmacpeB204
Cp4.1LG07g09880	CmaCh05G013120	Cucurbita maxima (Rimu)	cmacpeB792
Cp4.1LG07g09880	CmoCh05G013280	Cucurbita moschata (Rifu)	cmocpeB745
Cp4.1LG07g09880	CmoCh12G012550	Cucurbita moschata (Rifu)	cmocpeB176
Cp4.1LG07g09880	Cla016733	Watermelon (97103) v1	cpewmB810
Cp4.1LG07g09880	Csa2G006000	Cucumber (Chinese Long) v2	cpecuB821
Cp4.1LG07g09880	MELO3C004528	Melon (DHL92) v3.5.1	cpemeB772
Cp4.1LG07g09880	ClCG11G002810	Watermelon (Charleston Gray)	cpewcgB724
Cp4.1LG07g09880	CSPI02G01490	Wild cucumber (PI 183967)	cpecpiB822
Cp4.1LG07g09880	Lsi11G002950	Bottle gourd (USVL1VR-Ls)	cpelsiB660
Cp4.1LG07g09880	MELO3C004528.2	Melon (DHL92) v3.6.1	cpemedB908
Cp4.1LG07g09880	CsaV3_2G002630	Cucumber (Chinese Long) v3	cpecucB1015
Cp4.1LG07g09880	Bhi06G001664	Wax gourd	cpewgoB1023
Cp4.1LG07g09880	CsGy2G001520	Cucumber (Gy14) v2	cgybcpeB272
Cp4.1LG07g09880	Carg10886	Silver-seed gourd	carcpeB0817

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG07g09880	Cp4.1LG11g10850	Cucurbita pepo (Zucchini)	cpecpeB140

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG07g09880	Cucurbita pepo (Zucchini)	cpecpeB373
Cp4.1LG07g09880	Silver-seed gourd	carcpeB0055
Cp4.1LG07g09880	Silver-seed gourd	carcpeB0190
Cp4.1LG07g09880	Wax gourd	cpewgoB1068