BLAST of CsaV3_1G029170 vs. NCBI nr
Match:
XP_004146719.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Cucumis sativus] >XP_011655645.1 PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Cucumis sativus] >KGN65183.1 hypothetical protein Csa_1G257890 [Cucumis sativus])
HSP 1 Score: 1219.5 bits (3154), Expect = 0.0e+00
Identity = 757/757 (100.00%), Postives = 757/757 (100.00%), Query Frame = 0
Query: 1 MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV 60
MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV
Sbjct: 1 MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV 60
Query: 61 SQVEQDASDVSQSRFDEIVARKKYFTSKKPSKRAAGSHFSFSRNCNDNILFNGGELDVNY 120
SQVEQDASDVSQSRFDEIVARKKYFTSKKPSKRAAGSHFSFSRNCNDNILFNGGELDVNY
Sbjct: 61 SQVEQDASDVSQSRFDEIVARKKYFTSKKPSKRAAGSHFSFSRNCNDNILFNGGELDVNY 120
Query: 121 STISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDW 180
STISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDW
Sbjct: 121 STISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDW 180
Query: 181 DAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGM 240
DAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGM
Sbjct: 181 DAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGM 240
Query: 241 LMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQEDKV 300
LMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQEDKV
Sbjct: 241 LMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQEDKV 300
Query: 301 IPNLENWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
IPNLENWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 IPNLENWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLINLQA 420
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLINLQA
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLINLQA 420
Query: 421 KHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLSSQTS 480
KHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLSSQTS
Sbjct: 421 KHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLSSQTS 480
Query: 481 CSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLP 540
CSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLP
Sbjct: 481 CSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLP 540
Query: 541 KRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLE 600
KRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLE
Sbjct: 541 KRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLE 600
Query: 601 DACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCV 660
DACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCV
Sbjct: 601 DACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCV 660
Query: 661 INCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGL 720
INCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGL
Sbjct: 661 INCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGL 720
Query: 721 VDXXXXXXXXXXXXXXXXXXNMSSTVQKMKFNGFSVS 758
VDXXXXXXXXXXXXXXXXXXNMSSTVQKMKFNGFSVS
Sbjct: 721 VDXXXXXXXXXXXXXXXXXXNMSSTVQKMKFNGFSVS 757
BLAST of CsaV3_1G029170 vs. NCBI nr
Match:
XP_016899838.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Cucumis melo])
HSP 1 Score: 1149.0 bits (2971), Expect = 0.0e+00
Identity = 719/761 (94.48%), Postives = 739/761 (97.11%), Query Frame = 0
Query: 1 MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV 60
MASLKLSFSLHSFDSNKFDFP+NSP LSDYCSLFSIN ++HLNKS I+YSLARVHKPSKV
Sbjct: 1 MASLKLSFSLHSFDSNKFDFPVNSPPLSDYCSLFSINGYIHLNKSCILYSLARVHKPSKV 60
Query: 61 SQVEQDASDVSQSRFDEIVARKKYFTSKKPSKRAAGSHFSFSRNCN----DNILFNGGEL 120
SQVE +ASDVSQSRFD+I +RKKYFT+KKPSKRAAGSHFSFSRNC+ +NILF+GGEL
Sbjct: 61 SQVEPEASDVSQSRFDDIDSRKKYFTAKKPSKRAAGSHFSFSRNCSEKIFENILFSGGEL 120
Query: 121 DVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGR 180
DVNYSTISSDLSLE CNAILKRLEKCNDSKTL FFEWMRSNGKLKHNVSAYNLVLRVLGR
Sbjct: 121 DVNYSTISSDLSLEGCNAILKRLEKCNDSKTLDFFEWMRSNGKLKHNVSAYNLVLRVLGR 180
Query: 181 QEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVA 240
QEDWDAAEKLI+EVRAELGSQLDFQVFNTLIYACYKS FVE GTKWFRMMLECQVQPNVA
Sbjct: 181 QEDWDAAEKLIKEVRAELGSQLDFQVFNTLIYACYKSGFVEWGTKWFRMMLECQVQPNVA 240
Query: 241 TFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQ 300
TFGMLMGLYQK CDI+ESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQ
Sbjct: 241 TFGMLMGLYQKSCDIEESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQ 300
Query: 301 EDKVIPNLENWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
+DKVIPNLENW+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 KDKVIPNLENWLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLI 420
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX I
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI 420
Query: 421 NLQAKHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLS 480
NLQAKHEDEAG LKTLNDMLKIGCRPSSIVGNVLQAYEKARR+KSVPVLLTGSFYRKVLS
Sbjct: 421 NLQAKHEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYEKARRIKSVPVLLTGSFYRKVLS 480
Query: 481 SQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIY 540
SQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGH E+AIKIY
Sbjct: 481 SQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHFESAIKIY 540
Query: 541 TQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKA 600
Q PKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKA
Sbjct: 541 AQRPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKA 600
Query: 601 GSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEM 660
GSLEDACSVLDLMAEQQDIVPD+YLLRDMLRIYQRCGMVHKL+DLYYRILKSGVSWDQEM
Sbjct: 601 GSLEDACSVLDLMAEQQDIVPDVYLLRDMLRIYQRCGMVHKLSDLYYRILKSGVSWDQEM 660
Query: 661 YNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQ 720
YNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLF KARNLFG AQ
Sbjct: 661 YNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFAKARNLFGFAQ 720
Query: 721 KRGLVDXXXXXXXXXXXXXXXXXXNMSSTVQKMKFNGFSVS 758
KRGLVD XXXXXXXXXXXXXXXXXNMSSTVQ+MKFNGFSVS
Sbjct: 721 KRGLVDAXXXXXXXXXXXXXXXXXNMSSTVQQMKFNGFSVS 761
BLAST of CsaV3_1G029170 vs. NCBI nr
Match:
XP_022135004.1 (pentatricopeptide repeat-containing protein At4g30825, chloroplastic isoform X1 [Momordica charantia] >XP_022135005.1 pentatricopeptide repeat-containing protein At4g30825, chloroplastic isoform X2 [Momordica charantia] >XP_022135006.1 pentatricopeptide repeat-containing protein At4g30825, chloroplastic isoform X3 [Momordica charantia])
HSP 1 Score: 1055.4 bits (2728), Expect = 1.1e-304
Identity = 665/762 (87.27%), Postives = 710/762 (93.18%), Query Frame = 0
Query: 1 MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV 60
MASLK+SF L SFDS KFDFP+ S LLSD CS+FSI ++HLNKS I+YSLARVHKPSKV
Sbjct: 1 MASLKISFPLDSFDSKKFDFPVKSALLSDICSVFSITGYIHLNKSCILYSLARVHKPSKV 60
Query: 61 SQVEQDASDVSQSRF--DEIVARKKYFTSKKPSKRAAGSHFSFSRNCN----DNILFNGG 120
SQVE +ASD+ QS+F DEI ARKKY +KKPSKRA GS+FSFSRNC+ DNI+FNGG
Sbjct: 61 SQVEPEASDIYQSKFVDDEIGARKKYVGNKKPSKRAPGSYFSFSRNCSEKVFDNIIFNGG 120
Query: 121 ELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVL 180
E+DVNYSTISSDLSLEDCNAIL++LEKCND KTL FFEWMR NGKL+HNV+AYNLVLRVL
Sbjct: 121 EMDVNYSTISSDLSLEDCNAILRKLEKCNDGKTLVFFEWMRRNGKLEHNVTAYNLVLRVL 180
Query: 181 GRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPN 240
GRQEDWDAAEKLI +VRA+LGSQLDFQ+FNTLIYACYKS V++G KWFRMMLEC+VQPN
Sbjct: 181 GRQEDWDAAEKLIRQVRADLGSQLDFQIFNTLIYACYKSGLVDRGAKWFRMMLECRVQPN 240
Query: 241 VATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQL 300
VATFGMLMGL QK C+++E+EFAF+QMR+FGIVCE YASMITIY R++LYDKAEEVIQL
Sbjct: 241 VATFGMLMGLCQKGCNVEEAEFAFSQMRSFGIVCEAMYASMITIYARLSLYDKAEEVIQL 300
Query: 301 MQEDKVIPNLENWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
MQEDKV PNLENW+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 MQEDKVTPNLENWLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT 420
Query: 421 LINLQAKHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKV 480
LINLQAKHEDEAG L+TL+DMLKIGCRPSSIVGNVLQAYEKARR+KSVP+LLTGSFY KV
Sbjct: 421 LINLQAKHEDEAGALETLDDMLKIGCRPSSIVGNVLQAYEKARRIKSVPLLLTGSFYCKV 480
Query: 481 LSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIK 540
LSSQTSCSILVMAY+KHCLVDDALK+LREKEW DH+FEENLYHLLICSCKELG LENAIK
Sbjct: 481 LSSQTSCSILVMAYMKHCLVDDALKILREKEWNDHNFEENLYHLLICSCKELGQLENAIK 540
Query: 541 IYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYV 600
IYTQLPKRENKPNLHITCTMIDIYSIMG+FS+GEKLYLSLRSS IPLDLIA+NVVVRMYV
Sbjct: 541 IYTQLPKRENKPNLHITCTMIDIYSIMGKFSEGEKLYLSLRSSDIPLDLIAFNVVVRMYV 600
Query: 601 KAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQ 660
KAGSLEDAC VLDLM +QQDIVPD+YLLRDMLRIYQRCGMV KLADLYYRILKSGVSWDQ
Sbjct: 601 KAGSLEDACLVLDLMDQQQDIVPDVYLLRDMLRIYQRCGMVDKLADLYYRILKSGVSWDQ 660
Query: 661 EMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGL 720
EMYNCVINCCSRALPVDELSRLFDEML GFAPNTVTLNVMLDVYGKSKLFTKARNLFGL
Sbjct: 661 EMYNCVINCCSRALPVDELSRLFDEMLHRGFAPNTVTLNVMLDVYGKSKLFTKARNLFGL 720
Query: 721 AQKRGLVDXXXXXXXXXXXXXXXXXXNMSSTVQKMKFNGFSV 757
AQKRGLVD XXXXXXXXXXXX NMSSTVQKMKFNGFSV
Sbjct: 721 AQKRGLVDVISXXXXXXXXXXXXDFKNMSSTVQKMKFNGFSV 762
BLAST of CsaV3_1G029170 vs. NCBI nr
Match:
XP_023516176.1 (pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 993.0 bits (2566), Expect = 6.4e-286
Identity = 646/761 (84.89%), Postives = 689/761 (90.54%), Query Frame = 0
Query: 1 MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV 60
MASLKLSFSL SF S KFDFP+NS LLSD CS+FSI ++HLNKS ++YSL R HKPSKV
Sbjct: 1 MASLKLSFSLDSFHSKKFDFPVNSSLLSDCCSVFSITGYIHLNKSCVLYSLVRAHKPSKV 60
Query: 61 SQVEQDASDVSQSRFDEIVARKKYFTSKKPSKRAAGSHFSFSRNCN----DNILFNGGEL 120
+ E S+ DEI RKKYF KKPSKRA GS+FSFS+NC+ D+I+F+GGEL
Sbjct: 61 -EPETSGGYESKCAVDEIDTRKKYFGGKKPSKRAPGSYFSFSKNCSEKVFDSIVFHGGEL 120
Query: 121 DVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGR 180
DVNYSTISSDLSLEDCNAILKRLEKCND K LGFFEWMR N KL+HNVSAYNL+LRVLGR
Sbjct: 121 DVNYSTISSDLSLEDCNAILKRLEKCNDRKALGFFEWMRINRKLEHNVSAYNLILRVLGR 180
Query: 181 QEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVA 240
Q+DWDAA+KLI EVRAEL QLDFQVFNTLIYACYKS VEQG KWF+MMLE QV PNVA
Sbjct: 181 QQDWDAADKLIREVRAELSDQLDFQVFNTLIYACYKSGLVEQGAKWFQMMLEWQVLPNVA 240
Query: 241 TFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQ 300
TFGMLMGLYQK C++KE+EFAFNQMRNFGIVCETAYASMITIY R++LYDKAEEVI+LMQ
Sbjct: 241 TFGMLMGLYQKSCNLKEAEFAFNQMRNFGIVCETAYASMITIYTRLSLYDKAEEVIRLMQ 300
Query: 301 EDKVIPNLENWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
EDKVIPN+ENW+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 EDKVIPNVENWLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLI 420
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L+
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFTLM 420
Query: 421 NLQAKHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLS 480
NLQAKHED+AG LKTLNDMLKIGCR SSIVGNVLQAYEKARR+KSVP+LLTGSFYRKVL+
Sbjct: 421 NLQAKHEDDAGALKTLNDMLKIGCRLSSIVGNVLQAYEKARRIKSVPLLLTGSFYRKVLA 480
Query: 481 SQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIY 540
SQTSCSILVMAYVKH LVDDALKVLREKEW D FEENLYHLLICSCKEL HLENAIKIY
Sbjct: 481 SQTSCSILVMAYVKHGLVDDALKVLREKEWNDLRFEENLYHLLICSCKELDHLENAIKIY 540
Query: 541 TQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKA 600
TQLPKR+NKPNLHIT TMIDIYSIMGRFSDGEKLYLSL+SSGI LDLIA++VVVRMYVKA
Sbjct: 541 TQLPKRKNKPNLHITSTMIDIYSIMGRFSDGEKLYLSLKSSGIRLDLIAFSVVVRMYVKA 600
Query: 601 GSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEM 660
GSLEDACSVLD M +QQDIVPDIYL RDMLRIYQRCGMV KL D+YYRIL S VSWDQEM
Sbjct: 601 GSLEDACSVLDFMDKQQDIVPDIYLFRDMLRIYQRCGMVDKLQDVYYRILNSDVSWDQEM 660
Query: 661 YNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQ 720
YNCVINCCSRAL VDELS LFDEMLQ GFAPNTVTLNVMLDVYGKSKLF+KAR L LAQ
Sbjct: 661 YNCVINCCSRALLVDELSSLFDEMLQRGFAPNTVTLNVMLDVYGKSKLFSKARKLLLLAQ 720
Query: 721 KRGLVDXXXXXXXXXXXXXXXXXXNMSSTVQKMKFNGFSVS 758
K+GLVD XXXXXXXXXXXXXXXXXNMSSTV+ M+FNGFS+S
Sbjct: 721 KKGLVDVXXXXXXXXXXXXXXXXXNMSSTVRTMEFNGFSLS 760
BLAST of CsaV3_1G029170 vs. NCBI nr
Match:
XP_022922044.1 (pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Cucurbita moschata])
HSP 1 Score: 984.9 bits (2545), Expect = 1.7e-283
Identity = 645/761 (84.76%), Postives = 685/761 (90.01%), Query Frame = 0
Query: 1 MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV 60
MASLKLSFSL SF S KFDFP+NS LLSD CS+FSI ++HLNKS ++YSL R HKPSKV
Sbjct: 1 MASLKLSFSLDSFHSKKFDFPVNSSLLSDCCSVFSITGYIHLNKSFVLYSLVRAHKPSKV 60
Query: 61 SQVEQDASDVSQSRFDEIVARKKYFTSKKPSKRAAGSHFSFSRNCN----DNILFNGGEL 120
+ E S+ DEI RKKYF KKPSKRA GS+FSFS+NC+ D+I+F+GGEL
Sbjct: 61 -EPETSGGYESKCAVDEIDTRKKYFGGKKPSKRAPGSYFSFSKNCSEKVFDSIVFHGGEL 120
Query: 121 DVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGR 180
DVNYSTISSDLSLEDCNAILKRLEKCND K LGFFEWMR N KL+HNVSAYNL+LRVLGR
Sbjct: 121 DVNYSTISSDLSLEDCNAILKRLEKCNDRKALGFFEWMRINRKLEHNVSAYNLILRVLGR 180
Query: 181 QEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVA 240
Q+DWDAAEKLI EVRAE QLDFQVFNTLIYACYKS VEQG KWF+MMLE QV PNVA
Sbjct: 181 QQDWDAAEKLIREVRAESSDQLDFQVFNTLIYACYKSGLVEQGAKWFQMMLEWQVLPNVA 240
Query: 241 TFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQ 300
TFGMLMGLYQK C +KE+EFAFNQMRNFGIVCETAYASMITIY R++LYDKAEEVI+LMQ
Sbjct: 241 TFGMLMGLYQKSCSLKEAEFAFNQMRNFGIVCETAYASMITIYTRLSLYDKAEEVIRLMQ 300
Query: 301 EDKVIPNLENWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
EDKV PN+ENW+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 EDKVTPNVENWLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLI 420
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L+
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFTLM 420
Query: 421 NLQAKHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLS 480
NLQAKHED+AG LKTLNDMLKIGCR SSIVGNVLQAYEKARR+KSVP+LLTGSFYRKVL+
Sbjct: 421 NLQAKHEDDAGALKTLNDMLKIGCRLSSIVGNVLQAYEKARRIKSVPLLLTGSFYRKVLA 480
Query: 481 SQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIY 540
SQTSCSILVMAYVKH LVDDALKVLREKEW D FEENLYHLLICSCKEL HLENAIKIY
Sbjct: 481 SQTSCSILVMAYVKHGLVDDALKVLREKEWNDLRFEENLYHLLICSCKELDHLENAIKIY 540
Query: 541 TQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKA 600
TQLPK ENKPNLHIT TMIDIYSIMGRFSDGEKLYLSL+SSGI LDLIA++VVVRMYVKA
Sbjct: 541 TQLPKHENKPNLHITSTMIDIYSIMGRFSDGEKLYLSLKSSGIRLDLIAFSVVVRMYVKA 600
Query: 601 GSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEM 660
GSLEDACSVLDLM +QQDIVPDIYL RDMLRIYQRCGMV KL D+YYRIL S VSWDQEM
Sbjct: 601 GSLEDACSVLDLMDKQQDIVPDIYLFRDMLRIYQRCGMVDKLQDVYYRILNSDVSWDQEM 660
Query: 661 YNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQ 720
YNCVINCCSRAL VDELS LFDEMLQ GFAPNTVTLNVMLDVYGKSK F+KAR L LAQ
Sbjct: 661 YNCVINCCSRALLVDELSSLFDEMLQRGFAPNTVTLNVMLDVYGKSKHFSKARKLLLLAQ 720
Query: 721 KRGLVDXXXXXXXXXXXXXXXXXXNMSSTVQKMKFNGFSVS 758
K+GLVDXXXXXXXXXXXXXXXXXX MSSTV+ M+FNGFS+S
Sbjct: 721 KKGLVDXXXXXXXXXXXXXXXXXXXMSSTVRTMEFNGFSLS 760
BLAST of CsaV3_1G029170 vs. TAIR10
Match:
AT4G30825.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 453.0 bits (1164), Expect = 4.3e-127
Identity = 380/766 (49.61%), Postives = 462/766 (60.31%), Query Frame = 0
Query: 1 MASLKLSFSLHSFDS--NKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPS 60
M SL+ S L FDS +F F N D + + + +H ++S I S RV
Sbjct: 1 MGSLRFSIPLDPFDSKRKRFHFSANPSQFPDQFPIHFVTSSIHATRASSIGSSTRVLDKI 60
Query: 61 KVS----QVEQDASDVSQSRFDEIVARKKYFTSKKPSKRAAGSHFSFSRNCND----NIL 120
+VS + ++A + + + E K ++ +K+ FSF R ND N+
Sbjct: 61 RVSSLGTEANENAINSASAAPVERSRSSKLSGDQRGTKKYVARKFSFRRGSNDLELENLF 120
Query: 121 FNGGELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLV 180
N GE+DVNYS I SLE CN ILKRLE C+D+ + FF+WMR NGKL N AY+L+
Sbjct: 121 VNNGEIDVNYSAIKPGQSLEHCNGILKRLESCSDTNAIKFFDWMRCNGKLVGNFVAYSLI 180
Query: 181 LRVLGRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQ 240
LRVLGR+E+WD AE LI+E+ Q +QVFNT+IYAC K V+ +KWF MMLE
Sbjct: 181 LRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFG 240
Query: 241 VQPNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEE 300
V+PNVAT GMLMGLYQK +++E+EFAF+ MR FGIVCE+AY+SMITIY R+ LYDKAEE
Sbjct: 241 VRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTRLRLYDKAEE 300
Query: 301 VIQLMQEDKVIPNLENWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
VI LM++D+V LENW+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 VIDLMKQDRVRLKLENWLVMLNAYSQQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
Query: 421 XXXXLINLQAKHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSF 480
XXXX INLQAK+ D G +KT+ DM IGC+ SSI+G +LQAYEK ++ VP +L GSF
Sbjct: 421 XXXXXINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSF 480
Query: 481 YRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLE 540
+ + +QTS S LVM
Sbjct: 481 HNHIRLNQTSFSSLVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
Query: 541 NAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVV 600
Sbjct: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
Query: 601 RMYVKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGV 660
ACSVL++M EQ+DIVPD+YL RDMLRIYQ+C + KL LYYRI KSG+
Sbjct: 601 XXXXXXXXXXXACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGI 660
Query: 661 SWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARN 720
W+QEMYNCVINCC+RALP+DELS F+EM++ GF PNTVT NV+LDVYGK+KLF K
Sbjct: 661 HWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNE 720
Query: 721 LFGLAQKRGLVDXXXXXXXXXXXXXXXXXXNMSSTVQKMKFNGFSV 757
LF LA++ G+VD NMSS ++ M+F+GFSV
Sbjct: 721 LFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSV 766
BLAST of CsaV3_1G029170 vs. TAIR10
Match:
AT3G23020.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 60.5 bits (145), Expect = 6.3e-09
Identity = 46/181 (25.41%), Postives = 84/181 (46.41%), Query Frame = 0
Query: 127 LSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDWDAAEKL 186
LS ++ ILK E+ + + + FEW +S G + NV YN++LR+LG+ W + L
Sbjct: 152 LSNKERTIILK--EQIHWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSL 211
Query: 187 IEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGMLMGLYQ 246
+E+ G + + TLI K W M + +QP+ T G+++ +Y+
Sbjct: 212 WDEM-IRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYK 271
Query: 247 KKCDIKESEFAF-------NQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQEDK 301
K + +++E F N+ + + Y +MI Y + +A E + M E+
Sbjct: 272 KAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEG 329
BLAST of CsaV3_1G029170 vs. TAIR10
Match:
AT1G50270.1 (Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 60.1 bits (144), Expect = 8.2e-09
Identity = 40/167 (23.95%), Postives = 79/167 (47.31%), Query Frame = 0
Query: 546 PNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLEDACSV 605
PN +++ + +G G +++ + + I ++ A ++ +YVK G LE+A V
Sbjct: 304 PNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILV 363
Query: 606 LDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCVINCCS 665
+ + E+ ++Y M+ + G DL+Y +L S VS ++ + V++ C+
Sbjct: 364 FERLHEK-----NVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA 423
Query: 666 RALPVDELSRLFDEML-QCGFAPNTVTLNVMLDVYGKSKLFTKARNL 712
V+E RLF M + P M+D++G+ L +A+ L
Sbjct: 424 HGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKAL 465
BLAST of CsaV3_1G029170 vs. TAIR10
Match:
AT5G39350.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 60.1 bits (144), Expect = 8.2e-09
Identity = 53/269 (19.70%), Postives = 117/269 (43.49%), Query Frame = 0
Query: 415 LINLQAKHEDEAGTLKTLNDMLKIGCRPSSI-VGNVLQAYEKARRMKSVPVLLTGSFYRK 474
+IN + D L+ M G RP+++ + +++ A ++ L + ++
Sbjct: 290 MINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQ 349
Query: 475 VLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAI 534
V S + L+ Y K VD +V + + +I C + + +A+
Sbjct: 350 VYSDIIIETSLISMYAKCKRVDLCFRVFSGAS----KYHTGPWSAIIAGCVQNELVSDAL 409
Query: 535 KIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMY 594
++ ++ + + +PN+ +++ Y+ + ++ L +G L A +V +Y
Sbjct: 410 GLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVY 469
Query: 595 VKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWD 654
K G+LE A + + + E+ D+ L ++ Y G H ++ +++SGV+ +
Sbjct: 470 SKCGTLESAHKIFNGIQEKHK-SKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPN 529
Query: 655 QEMYNCVINCCSRALPVDELSRLFDEMLQ 683
+ + +N CS + V+E LF ML+
Sbjct: 530 EITFTSALNACSHSGLVEEGLTLFRFMLE 553
BLAST of CsaV3_1G029170 vs. TAIR10
Match:
AT3G20730.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 58.5 bits (140), Expect = 2.4e-08
Identity = 56/246 (22.76%), Postives = 111/246 (45.12%), Query Frame = 0
Query: 484 LVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLE------NAIKIYT 543
LV AYVK + +A K+ + +D LL C+ G + +A I+
Sbjct: 255 LVNAYVKCGSLANAWKLHEGTKKRD---------LLSCTALITGFSQQNNCTSDAFDIFK 314
Query: 544 QLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLY-LSLRSSGIPLDLIAYNVVVRMYVKA 603
+ + + K + + +M+ I + + + G +++ +L+SS I D+ N ++ MY K+
Sbjct: 315 DMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKS 374
Query: 604 GSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEM 663
G +EDA + M E+ D+ ++ Y R G K DLY R+ + +
Sbjct: 375 GEIEDAVLAFEEMKEK-----DVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVT 434
Query: 664 YNCVINCCSRALPVDELSRLFDEML-QCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLA 722
+ +++ CS + +++D M+ + G L+ ++D+ +S +A L +
Sbjct: 435 FLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYAL--IR 484
BLAST of CsaV3_1G029170 vs. Swiss-Prot
Match:
sp|O65567|PP342_ARATH (Pentatricopeptide repeat-containing protein At4g30825, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g30825 PE=2 SV=2)
HSP 1 Score: 453.0 bits (1164), Expect = 7.8e-126
Identity = 380/766 (49.61%), Postives = 462/766 (60.31%), Query Frame = 0
Query: 1 MASLKLSFSLHSFDS--NKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPS 60
M SL+ S L FDS +F F N D + + + +H ++S I S RV
Sbjct: 1 MGSLRFSIPLDPFDSKRKRFHFSANPSQFPDQFPIHFVTSSIHATRASSIGSSTRVLDKI 60
Query: 61 KVS----QVEQDASDVSQSRFDEIVARKKYFTSKKPSKRAAGSHFSFSRNCND----NIL 120
+VS + ++A + + + E K ++ +K+ FSF R ND N+
Sbjct: 61 RVSSLGTEANENAINSASAAPVERSRSSKLSGDQRGTKKYVARKFSFRRGSNDLELENLF 120
Query: 121 FNGGELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLV 180
N GE+DVNYS I SLE CN ILKRLE C+D+ + FF+WMR NGKL N AY+L+
Sbjct: 121 VNNGEIDVNYSAIKPGQSLEHCNGILKRLESCSDTNAIKFFDWMRCNGKLVGNFVAYSLI 180
Query: 181 LRVLGRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQ 240
LRVLGR+E+WD AE LI+E+ Q +QVFNT+IYAC K V+ +KWF MMLE
Sbjct: 181 LRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFG 240
Query: 241 VQPNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEE 300
V+PNVAT GMLMGLYQK +++E+EFAF+ MR FGIVCE+AY+SMITIY R+ LYDKAEE
Sbjct: 241 VRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTRLRLYDKAEE 300
Query: 301 VIQLMQEDKVIPNLENWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
VI LM++D+V LENW+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 VIDLMKQDRVRLKLENWLVMLNAYSQQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
Query: 421 XXXXLINLQAKHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSF 480
XXXX INLQAK+ D G +KT+ DM IGC+ SSI+G +LQAYEK ++ VP +L GSF
Sbjct: 421 XXXXXINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSF 480
Query: 481 YRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLE 540
+ + +QTS S LVM
Sbjct: 481 HNHIRLNQTSFSSLVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
Query: 541 NAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVV 600
Sbjct: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
Query: 601 RMYVKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGV 660
ACSVL++M EQ+DIVPD+YL RDMLRIYQ+C + KL LYYRI KSG+
Sbjct: 601 XXXXXXXXXXXACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGI 660
Query: 661 SWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARN 720
W+QEMYNCVINCC+RALP+DELS F+EM++ GF PNTVT NV+LDVYGK+KLF K
Sbjct: 661 HWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNE 720
Query: 721 LFGLAQKRGLVDXXXXXXXXXXXXXXXXXXNMSSTVQKMKFNGFSV 757
LF LA++ G+VD NMSS ++ M+F+GFSV
Sbjct: 721 LFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSV 766
BLAST of CsaV3_1G029170 vs. Swiss-Prot
Match:
sp|Q9LS88|PP250_ARATH (Pentatricopeptide repeat-containing protein At3g23020 OS=Arabidopsis thaliana OX=3702 GN=At3g23020 PE=2 SV=1)
HSP 1 Score: 60.5 bits (145), Expect = 1.1e-07
Identity = 46/181 (25.41%), Postives = 84/181 (46.41%), Query Frame = 0
Query: 127 LSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDWDAAEKL 186
LS ++ ILK E+ + + + FEW +S G + NV YN++LR+LG+ W + L
Sbjct: 152 LSNKERTIILK--EQIHWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSL 211
Query: 187 IEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGMLMGLYQ 246
+E+ G + + TLI K W M + +QP+ T G+++ +Y+
Sbjct: 212 WDEM-IRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYK 271
Query: 247 KKCDIKESEFAF-------NQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQEDK 301
K + +++E F N+ + + Y +MI Y + +A E + M E+
Sbjct: 272 KAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEG 329
BLAST of CsaV3_1G029170 vs. Swiss-Prot
Match:
sp|Q9FLZ9|PP405_ARATH (Pentatricopeptide repeat-containing protein At5g39350 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E16 PE=2 SV=1)
HSP 1 Score: 60.1 bits (144), Expect = 1.5e-07
Identity = 53/269 (19.70%), Postives = 117/269 (43.49%), Query Frame = 0
Query: 415 LINLQAKHEDEAGTLKTLNDMLKIGCRPSSI-VGNVLQAYEKARRMKSVPVLLTGSFYRK 474
+IN + D L+ M G RP+++ + +++ A ++ L + ++
Sbjct: 290 MINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQ 349
Query: 475 VLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAI 534
V S + L+ Y K VD +V + + +I C + + +A+
Sbjct: 350 VYSDIIIETSLISMYAKCKRVDLCFRVFSGAS----KYHTGPWSAIIAGCVQNELVSDAL 409
Query: 535 KIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMY 594
++ ++ + + +PN+ +++ Y+ + ++ L +G L A +V +Y
Sbjct: 410 GLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVY 469
Query: 595 VKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWD 654
K G+LE A + + + E+ D+ L ++ Y G H ++ +++SGV+ +
Sbjct: 470 SKCGTLESAHKIFNGIQEKHK-SKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPN 529
Query: 655 QEMYNCVINCCSRALPVDELSRLFDEMLQ 683
+ + +N CS + V+E LF ML+
Sbjct: 530 EITFTSALNACSHSGLVEEGLTLFRFMLE 553
BLAST of CsaV3_1G029170 vs. Swiss-Prot
Match:
sp|Q9SX45|PPR75_ARATH (Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E42 PE=2 SV=1)
HSP 1 Score: 60.1 bits (144), Expect = 1.5e-07
Identity = 40/167 (23.95%), Postives = 79/167 (47.31%), Query Frame = 0
Query: 546 PNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLEDACSV 605
PN +++ + +G G +++ + + I ++ A ++ +YVK G LE+A V
Sbjct: 304 PNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILV 363
Query: 606 LDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCVINCCS 665
+ + E+ ++Y M+ + G DL+Y +L S VS ++ + V++ C+
Sbjct: 364 FERLHEK-----NVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA 423
Query: 666 RALPVDELSRLFDEML-QCGFAPNTVTLNVMLDVYGKSKLFTKARNL 712
V+E RLF M + P M+D++G+ L +A+ L
Sbjct: 424 HGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKAL 465
BLAST of CsaV3_1G029170 vs. Swiss-Prot
Match:
sp|Q9LT48|PP244_ARATH (Pentatricopeptide repeat-containing protein At3g20730 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E94 PE=2 SV=1)
HSP 1 Score: 58.5 bits (140), Expect = 4.3e-07
Identity = 56/246 (22.76%), Postives = 111/246 (45.12%), Query Frame = 0
Query: 484 LVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLE------NAIKIYT 543
LV AYVK + +A K+ + +D LL C+ G + +A I+
Sbjct: 256 LVNAYVKCGSLANAWKLHEGTKKRD---------LLSCTALITGFSQQNNCTSDAFDIFK 315
Query: 544 QLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLY-LSLRSSGIPLDLIAYNVVVRMYVKA 603
+ + + K + + +M+ I + + + G +++ +L+SS I D+ N ++ MY K+
Sbjct: 316 DMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKS 375
Query: 604 GSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEM 663
G +EDA + M E+ D+ ++ Y R G K DLY R+ + +
Sbjct: 376 GEIEDAVLAFEEMKEK-----DVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVT 435
Query: 664 YNCVINCCSRALPVDELSRLFDEML-QCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLA 722
+ +++ CS + +++D M+ + G L+ ++D+ +S +A L +
Sbjct: 436 FLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYAL--IR 485
BLAST of CsaV3_1G029170 vs. TrEMBL
Match:
tr|A0A0A0LTR9|A0A0A0LTR9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257890 PE=4 SV=1)
HSP 1 Score: 1219.5 bits (3154), Expect = 0.0e+00
Identity = 757/757 (100.00%), Postives = 757/757 (100.00%), Query Frame = 0
Query: 1 MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV 60
MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV
Sbjct: 1 MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV 60
Query: 61 SQVEQDASDVSQSRFDEIVARKKYFTSKKPSKRAAGSHFSFSRNCNDNILFNGGELDVNY 120
SQVEQDASDVSQSRFDEIVARKKYFTSKKPSKRAAGSHFSFSRNCNDNILFNGGELDVNY
Sbjct: 61 SQVEQDASDVSQSRFDEIVARKKYFTSKKPSKRAAGSHFSFSRNCNDNILFNGGELDVNY 120
Query: 121 STISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDW 180
STISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDW
Sbjct: 121 STISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDW 180
Query: 181 DAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGM 240
DAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGM
Sbjct: 181 DAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGM 240
Query: 241 LMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQEDKV 300
LMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQEDKV
Sbjct: 241 LMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQEDKV 300
Query: 301 IPNLENWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
IPNLENWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 IPNLENWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLINLQA 420
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLINLQA
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLINLQA 420
Query: 421 KHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLSSQTS 480
KHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLSSQTS
Sbjct: 421 KHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLSSQTS 480
Query: 481 CSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLP 540
CSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLP
Sbjct: 481 CSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLP 540
Query: 541 KRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLE 600
KRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLE
Sbjct: 541 KRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLE 600
Query: 601 DACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCV 660
DACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCV
Sbjct: 601 DACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCV 660
Query: 661 INCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGL 720
INCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGL
Sbjct: 661 INCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGL 720
Query: 721 VDXXXXXXXXXXXXXXXXXXNMSSTVQKMKFNGFSVS 758
VDXXXXXXXXXXXXXXXXXXNMSSTVQKMKFNGFSVS
Sbjct: 721 VDXXXXXXXXXXXXXXXXXXNMSSTVQKMKFNGFSVS 757
BLAST of CsaV3_1G029170 vs. TrEMBL
Match:
tr|A0A1S4DV41|A0A1S4DV41_CUCME (pentatricopeptide repeat-containing protein At4g30825, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487334 PE=4 SV=1)
HSP 1 Score: 1149.0 bits (2971), Expect = 0.0e+00
Identity = 719/761 (94.48%), Postives = 739/761 (97.11%), Query Frame = 0
Query: 1 MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV 60
MASLKLSFSLHSFDSNKFDFP+NSP LSDYCSLFSIN ++HLNKS I+YSLARVHKPSKV
Sbjct: 1 MASLKLSFSLHSFDSNKFDFPVNSPPLSDYCSLFSINGYIHLNKSCILYSLARVHKPSKV 60
Query: 61 SQVEQDASDVSQSRFDEIVARKKYFTSKKPSKRAAGSHFSFSRNCN----DNILFNGGEL 120
SQVE +ASDVSQSRFD+I +RKKYFT+KKPSKRAAGSHFSFSRNC+ +NILF+GGEL
Sbjct: 61 SQVEPEASDVSQSRFDDIDSRKKYFTAKKPSKRAAGSHFSFSRNCSEKIFENILFSGGEL 120
Query: 121 DVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGR 180
DVNYSTISSDLSLE CNAILKRLEKCNDSKTL FFEWMRSNGKLKHNVSAYNLVLRVLGR
Sbjct: 121 DVNYSTISSDLSLEGCNAILKRLEKCNDSKTLDFFEWMRSNGKLKHNVSAYNLVLRVLGR 180
Query: 181 QEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVA 240
QEDWDAAEKLI+EVRAELGSQLDFQVFNTLIYACYKS FVE GTKWFRMMLECQVQPNVA
Sbjct: 181 QEDWDAAEKLIKEVRAELGSQLDFQVFNTLIYACYKSGFVEWGTKWFRMMLECQVQPNVA 240
Query: 241 TFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQ 300
TFGMLMGLYQK CDI+ESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQ
Sbjct: 241 TFGMLMGLYQKSCDIEESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQ 300
Query: 301 EDKVIPNLENWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
+DKVIPNLENW+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 KDKVIPNLENWLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLI 420
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX I
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI 420
Query: 421 NLQAKHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLS 480
NLQAKHEDEAG LKTLNDMLKIGCRPSSIVGNVLQAYEKARR+KSVPVLLTGSFYRKVLS
Sbjct: 421 NLQAKHEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYEKARRIKSVPVLLTGSFYRKVLS 480
Query: 481 SQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIY 540
SQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGH E+AIKIY
Sbjct: 481 SQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHFESAIKIY 540
Query: 541 TQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKA 600
Q PKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKA
Sbjct: 541 AQRPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKA 600
Query: 601 GSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEM 660
GSLEDACSVLDLMAEQQDIVPD+YLLRDMLRIYQRCGMVHKL+DLYYRILKSGVSWDQEM
Sbjct: 601 GSLEDACSVLDLMAEQQDIVPDVYLLRDMLRIYQRCGMVHKLSDLYYRILKSGVSWDQEM 660
Query: 661 YNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQ 720
YNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLF KARNLFG AQ
Sbjct: 661 YNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFAKARNLFGFAQ 720
Query: 721 KRGLVDXXXXXXXXXXXXXXXXXXNMSSTVQKMKFNGFSVS 758
KRGLVD XXXXXXXXXXXXXXXXXNMSSTVQ+MKFNGFSVS
Sbjct: 721 KRGLVDAXXXXXXXXXXXXXXXXXNMSSTVQQMKFNGFSVS 761
BLAST of CsaV3_1G029170 vs. TrEMBL
Match:
tr|A0A2N9HKQ3|A0A2N9HKQ3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40694 PE=4 SV=1)
HSP 1 Score: 760.8 bits (1963), Expect = 3.5e-216
Identity = 524/783 (66.92%), Postives = 620/783 (79.18%), Query Frame = 0
Query: 1 MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV 60
MAS+KLS L S+DS K F +N P S++CS+ SI +++H+++ I SL R + KV
Sbjct: 1 MASMKLSILLDSYDSKK--FTVNPPQPSNWCSVSSIFSYIHVSRVCTINSLNR-NTRIKV 60
Query: 61 SQVEQDASDVSQSR--FDEIV----------------------ARKKYFTSKKPSKRAAG 120
S+ + D ++S+S D+IV K++ +KK KR G
Sbjct: 61 SRFDTDLPNISESNGVDDDIVLSPTKGMVNESLIEQNPDFEGRVEKRFRGTKKGIKREVG 120
Query: 121 SHFSFSRNCN----DNILFNGGELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFE 180
+ F RN + +N+ + GELDVNYS I SDLSLE CNA+LKRLEKC+DSKTL FFE
Sbjct: 121 LKYRFRRNGSEREIENLFVDDGELDVNYSGIGSDLSLEHCNAVLKRLEKCSDSKTLEFFE 180
Query: 181 WMRSNGKLKHNVSAYNLVLRVLGRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYK 240
WMRSNGKL+ NVSAYNLVLRVLGR+EDWDAAE ++ E+ +LG +LD +VFNT+IYAC K
Sbjct: 181 WMRSNGKLEQNVSAYNLVLRVLGRREDWDAAETMVRELCNKLGCELDCRVFNTVIYACCK 240
Query: 241 SRFVEQGTKWFRMMLECQVQPNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAY 300
R VE G KWFRMMLE V+PNVATFGMLMGLYQK +++E+EF F QMR+F IVC++AY
Sbjct: 241 LRRVELGAKWFRMMLENGVRPNVATFGMLMGLYQKGWNVEEAEFTFCQMRDFEIVCQSAY 300
Query: 301 ASMITIYIRMNLYDKAEEVIQLMQEDKVIPNLENWVXXXXXXXXXXXXXXXXXXXXXXXX 360
++MITIY R++LYDKAE VI LM+EDKV NLENW+XXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 SAMITIYTRLSLYDKAEGVIGLMREDKVDKNLENWLXXXXXXXXXXXXXXXXXXXXXXXX 360
Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
Query: 421 XXXXXXXXXXXXXXXXXXXXXXLINLQAKHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQA 480
XXXXXXXXXXXXXXXXXXXXXX LQA+H DE G ++TL+DMLK+ C+ SSI+G +LQA
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXLQARHGDEEGAVRTLDDMLKMECQHSSILGTLLQA 480
Query: 481 YEKARRMKSVPVLLTGSFYRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFE 540
YE+A R+ VP++L GSFY+ VL +QTSCSILVMAYVK+CLVDDA+KVL +K WKD FE
Sbjct: 481 YERAGRIDKVPLILKGSFYQHVLVNQTSCSILVMAYVKNCLVDDAIKVLGDKFWKDPLFE 540
Query: 541 ENLYHLLICSCKELGHLENAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYL 600
NLYHLLICSCKE GHLENAIK+YTQ+PK ++KPNLHI+CTMIDIYS+M F + E+LYL
Sbjct: 541 NNLYHLLICSCKEWGHLENAIKVYTQMPKHDDKPNLHISCTMIDIYSVMSLFPEAEQLYL 600
Query: 601 SLRSSGIPLDLIAYNVVVRMYVKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRC 660
L+SSGI LD+IA+++VVRMY+KAG L ACSVLD+M +Q DIVPDIYL RDML
Sbjct: 601 ELKSSGIALDMIAFSIVVRMYIKAGLLSKACSVLDMMDKQGDIVPDIYLFRDMLXXXXXX 660
Query: 661 GMVHKLADLYYRILKSGVSWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTL 720
M+ KLADLYY+ILKSGV+WDQEMYNCVINCC+RALPVDELSRLFDEMLQ GF+PNT+T
Sbjct: 661 XMLGKLADLYYKILKSGVTWDQEMYNCVINCCARALPVDELSRLFDEMLQLGFSPNTITF 720
Query: 721 NVMLDVYGKSKLFTKARNLFGLAQKRGLVDXXXXXXXXXXXXXXXXXXNMSSTVQKMKFN 756
NVMLDVYGKSKLFTKA+ LF +AQK+GLVD NMSSTV+KM+FN
Sbjct: 721 NVMLDVYGKSKLFTKAKRLFWMAQKQGLVDVISYNTIIAAYGQNKDFKNMSSTVRKMQFN 780
BLAST of CsaV3_1G029170 vs. TrEMBL
Match:
tr|A0A2I4EW02|A0A2I4EW02_9ROSI (pentatricopeptide repeat-containing protein At4g30825, chloroplastic OS=Juglans regia OX=51240 GN=LOC108993204 PE=4 SV=1)
HSP 1 Score: 743.0 bits (1917), Expect = 7.6e-211
Identity = 503/785 (64.08%), Postives = 601/785 (76.56%), Query Frame = 0
Query: 1 MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLH-----------LNKSSIIY 60
MA LKLS SL +FDS KF+ P S++CS +SI +++H LN+ I
Sbjct: 1 MALLKLSISLDTFDSKKFNVSAAQP--SNWCSEYSIFSYIHVSRACASSINPLNRKQINV 60
Query: 61 SLARVHKPSKVSQVEQDASDVSQSRFDEIV--------------ARKKYFTSKKPSKRAA 120
S + P ++S Q D+ S +V K++ SKK KR
Sbjct: 61 SRFNIELP-EISDSNQANKDIVLSSTKSLVNESVIEQKPDFKHKVGKRFLGSKKGIKREV 120
Query: 121 GSHFSFSRNCND----NILFNGGELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFF 180
G F F RN D N+ GELDV+YS I SDLSLE CNAILKRLEKC D+KT+ FF
Sbjct: 121 GLEFRFGRNDTDREIENLFVGDGELDVDYSAIGSDLSLEHCNAILKRLEKCCDTKTMVFF 180
Query: 181 EWMRSNGKLKHNVSAYNLVLRVLGRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACY 240
EWMRSNGKL+ N+SA+N+VLRVLGR+EDWDAAE ++ + +L +LD +VFNT+IY+
Sbjct: 181 EWMRSNGKLEQNMSAHNIVLRVLGRKEDWDAAEAMVRGLSIKLAGELDCRVFNTVIYSFC 240
Query: 241 KSRFVEQGTKWFRMMLECQVQPNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETA 300
K E G KWFRMMLE V+PNVATFGMLMGLYQK +++E+EF F QMRNFGIVCE+A
Sbjct: 241 KLGRAELGAKWFRMMLENGVRPNVATFGMLMGLYQKGWNVEEAEFTFRQMRNFGIVCESA 300
Query: 301 YASMITIYIRMNLYDKAEEVIQLMQEDKVIPNLENWVXXXXXXXXXXXXXXXXXXXXXXX 360
Y++MITI+ R+NLYDKAE+VI LM EDKV+ NLENW+ XXXXXXXXXXXXXXXXX
Sbjct: 301 YSAMITIFTRLNLYDKAEQVIGLMTEDKVVLNLENWLVILNTFXXXXXXXXXXXXXXXXX 360
Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
Query: 421 XXXXXXXXXXXXXXXXXXXXXXXLINLQAKHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQ 480
XXXXXXXXXXXXXXXXXXXXXXX E G ++TL+DMLK+GC+ SSI+G +LQ
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGAVRTLDDMLKMGCQCSSILGTLLQ 480
Query: 481 AYEKARRMKSVPVLLTGSFYRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHF 540
AYE+A R+ V +L G Y+ +L +QTSCSILV AYVKHCLVDDA++VL +K WKD F
Sbjct: 481 AYERAGRIDKVAQILNGPLYQHILVNQTSCSILVAAYVKHCLVDDAIRVLEDKVWKDLPF 540
Query: 541 EENLYHLLICSCKELGHLENAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLY 600
E NLYHLLICSCKELG LE A+KIYTQ+PK ++KPNLHI+CTMIDIYS+MG F + EK+Y
Sbjct: 541 ENNLYHLLICSCKELGQLEQAVKIYTQMPKHDDKPNLHISCTMIDIYSVMGLFPEAEKIY 600
Query: 601 LSLRSSGIPLDLIAYNVVVRMYVKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQR 660
L L+SSGI LD+IA+++VVRMY+KAGSL +AC+VLD++ +Q+DIVPD+YLLRDMLRIYQR
Sbjct: 601 LKLKSSGIALDMIAFSIVVRMYIKAGSLRNACAVLDILDKQRDIVPDVYLLRDMLRIYQR 660
Query: 661 CGMVHKLADLYYRILKSGVSWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVT 720
CGM+ KLADLY++I+K G++WDQEMYNCVINCCSRALPVDELSRLFDEMLQ GF+PNT+T
Sbjct: 661 CGMLDKLADLYHKIMKIGMTWDQEMYNCVINCCSRALPVDELSRLFDEMLQRGFSPNTIT 720
Query: 721 LNVMLDVYGKSKLFTKARNLFGLAQKRGLVDXXXXXXXXXXXXXXXXXXNMSSTVQKMKF 757
+NVMLDVYGKSKLFTKA+ LF +AQK+GL+D NMSS V+KM+F
Sbjct: 721 VNVMLDVYGKSKLFTKAKRLFWVAQKQGLIDVISYNTVIAAYGQNKKFKNMSSMVRKMQF 780
BLAST of CsaV3_1G029170 vs. TrEMBL
Match:
tr|A0A2C9ULY6|A0A2C9ULY6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G112800 PE=4 SV=1)
HSP 1 Score: 725.7 bits (1872), Expect = 1.3e-205
Identity = 495/780 (63.46%), Postives = 615/780 (78.85%), Query Frame = 0
Query: 1 MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV 60
MASL+LS SL++ SN PL P + SLFSI++ + +K II L+R + P KV
Sbjct: 1 MASLRLSISLNANKSNFSKNPLQFP---THVSLFSISSCIPSSKPCIITILSRFN-PVKV 60
Query: 61 SQVEQDASD-----------VSQSRFDEIV---------ARKKYFTSKKPSKRAAGSHFS 120
S+VE + S+ V +S +++ RK Y +KK K G F+
Sbjct: 61 SRVETELSESEPVLSTSRDLVQESLNQDLIERNQDLKRKIRKNYRGAKKGRKSQVGFKFN 120
Query: 121 FSRNCN---DNILFNGGELDVNYSTISSDLSLEDCNAILKRLEKC-NDSKTLGFFEWMRS 180
+ R+ + ++ + +LDV+YS I+S+LSLE CN ILK+LE C ++SKTL FFEWM+S
Sbjct: 121 YKRHGSQQREDFFVHDTDLDVDYSVINSNLSLEQCNYILKQLEGCSSESKTLRFFEWMKS 180
Query: 181 NGKLKHNVSAYNLVLRVLGRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFV 240
NGKL+ NV+AYN++LRVL R+EDWD AE++I E+ GS LDF++FNTLIY C K +
Sbjct: 181 NGKLEKNVNAYNVILRVLARREDWDCAERMIRELSDSFGSALDFRIFNTLIYICSKRGHM 240
Query: 241 EQGTKWFRMMLECQVQPNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMI 300
+ G KWF MMLE VQPNVATFGMLMGLYQK +++E+EF F+QMR+F I+C++AY++MI
Sbjct: 241 KLGGKWFLMMLELGVQPNVATFGMLMGLYQKGWNVEEAEFVFSQMRSFRIICQSAYSAMI 300
Query: 301 TIYIRMNLYDKAEEVIQLMQEDKVIPNLENWVXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
TIY R+ LYDKAEEVI +M++D V NLENW+ XXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 TIYTRLRLYDKAEEVIGIMRKDNVALNLENWLVXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
Query: 421 XXXXXXXXXXXXXXXXXXLINLQAKHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKA 480
XXXXXXXXXXXXXXXXXX NLQAKH+DE G ++T+ DMLK+GC+ SSI+G +L++YE+A
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXNLQAKHDDEEGAVRTIQDMLKMGCQYSSILGTLLKSYERA 480
Query: 481 RRMKSVPVLLTGSFYRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLY 540
++ VP+LL GSFY+ VL +QTSCSILVMAYVKHCLV DAL+VL++KEW D FE+NLY
Sbjct: 481 GKIDKVPLLLKGSFYQHVLVNQTSCSILVMAYVKHCLVHDALEVLQDKEWNDPAFEDNLY 540
Query: 541 HLLICSCKELGHLENAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRS 600
HLLICSCKELGHLENA+KIY+Q+PK KPNLHI CTMID+YS +G F++GEKLYL L+S
Sbjct: 541 HLLICSCKELGHLENAVKIYSQMPKSNGKPNLHILCTMIDVYSSLGLFTEGEKLYLQLKS 600
Query: 601 SGIPLDLIAYNVVVRMYVKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVH 660
SGI LD+IA+++VVRMYVKAG L+DAC+VL+ + +Q+DI+PDIYL RDMLRIYQRCGM+
Sbjct: 601 SGIALDMIAFSIVVRMYVKAGLLKDACTVLETIEKQKDIIPDIYLFRDMLRIYQRCGMMS 660
Query: 661 KLADLYYRILKSGVSWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVML 720
KL DLYY+IL+SGV WDQE+Y+C+INCC+RALPV E+SRLF+EML+CGF+PNT+T NVML
Sbjct: 661 KLNDLYYKILRSGVVWDQELYSCIINCCARALPVYEISRLFNEMLRCGFSPNTITFNVML 720
Query: 721 DVYGKSKLFTKARNLFGLAQKRGLVDXXXXXXXXXXXXXXXXXXNMSSTVQKMKFNGFSV 757
DVYGK+K F K + LF +A+KRGLVD NM+S +QKM+F+GFSV
Sbjct: 721 DVYGKAKNFRKVKELFWMARKRGLVDVISYNTVIAAYGHNRDFKNMASAIQKMQFDGFSV 776
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_004146719.1 | 0.0e+00 | 100.00 | PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic ... | [more] |
XP_016899838.1 | 0.0e+00 | 94.48 | PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic ... | [more] |
XP_022135004.1 | 1.1e-304 | 87.27 | pentatricopeptide repeat-containing protein At4g30825, chloroplastic isoform X1 ... | [more] |
XP_023516176.1 | 6.4e-286 | 84.89 | pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Cucurbita ... | [more] |
XP_022922044.1 | 1.7e-283 | 84.76 | pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Cucurbita ... | [more] |
Match Name | E-value | Identity | Description | |
AT4G30825.1 | 4.3e-127 | 49.61 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G23020.1 | 6.3e-09 | 25.41 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G50270.1 | 8.2e-09 | 23.95 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G39350.1 | 8.2e-09 | 19.70 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G20730.1 | 2.4e-08 | 22.76 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |