CSPI01G17930 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G17930
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Pentatricopeptide repeat-containing protein, putative
Location	Chr1 : 13443637 .. 13447922 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGGGGTTGTTGTTGTTCAATCACTTACGCCTACCTCTACTCTTCTGATATCTGATCACACAATTCTTTGATCCTTTACTTTCCTCCACTGCTTCAATCTCCGTTATCTTCTCCACCTCAAAAATCTATGGTAAATACCCTTCTCATACACCCTCATTCCTCTTTCCTTGGTTTTGCATTTCTCTCATTTCTTCTCACCTCAATGTTCACCCATGGCTTCCCTCAAACTTTCCTTCTCTTTACATTCTTTTGATTCCAATAAGTTCGATTTTCCTCTCAATTCACCTCTGCTCTCTGATTATTGCTCTCTTTTCTCCATCAATGCTCATCTTCATCTCAATAAGTCCTCCATAATTTACTCTCTGGCTAGGGTTCACAAGCCCTCTAAAGTTTCTCAGGTGGAACAGGAGGCGTCCGACGTTTCCCAATCCAGATTTGATGAAATTGTCGCCAGGAAAAAGTATTTTACCGCTAAGAAGCCTTCAAAGAGAGCAGCAGGTTCGCATTTTAGTTTCAGTAGGAATTGTAATGACAATATTCTTTTTAATGGTGGTGAATTGGATGTCAATTACTCAACTATATCCTCTGATTTGAGCTTAGAGGATTGCAATGCTATTTTGAAAAGGCTAGAGAAGTGTAACGATTCCAAAACACTGGGTTTCTTTGAGTGGATGAGAAGTAATGGGAAATTAAAACACAATGTGAGTGCTTATAATTTGGTTCTTCGAGTGTTGGGTAGGCAAGAAGATTGGGATGCTGCCGAGAAGCTAATTGAGGAAGTTAGAGCTGAGTTGGGTTCTCAATTGGATTTTCAGGTTTTTAACACTCTTATCTATGCTTGTTATAAATCGAGGTTTGTGGAGCAGGGTACGAAATGGTTTCGAATGATGTTGGAATGCCAAGTGCAGCCCAATGTCGCAACATTTGGAATGCTTATGGGTCTCTATCAGAAGAAGTGTGATATTAAGGAATCGGAGTTTGCCTTTAATCAGATGAGAAACTTTGGTATTGTTTGTGAAACAGCATATGCATCTATGATTACTATATACATACGTATGAATTTATACGATAAAGCAGAAGAGGTGATTCAATTAATGCAAGAAGATAAAGTGATTCCTAATCTAGAGAACTGGGTAGTAATGCTTAATGCTTATTGTCAGCAAGGCAAAATGGAGGAAGCTGAACTTGTATTTGCCTCAATGGAAGAAGCTGGGTTTTCATCCAATATCATTGCATATAATACCTTGATTACTGGGTATGGGAAGGCATCAAATATGGATACTGCTCAACGCCTGTTCTTGGGCATCAAGAACTCTGGAGTAGAACCTGATGAAACGACTTACCGCTCCATGATTGAAGGTTGGGGTCGAGCTGGTAATTATAAAATGGCAGAATGGTATTATAAGGAGCTCAAGCGGAGAGGATATATGCCGAATTCCTCTAACTTGTTCACCCTCATAAATCTACAAGCCAAACATGAGGATGAAGCAGGTGCACTTAAAACTCTAAATGATATGCTAAAGATTGGATGCCGGCCTTCTTCCATTGTTGGAAATGTTTTGCAAGCATATGAAAAGGCTAGAAGAATGAAAAGTGTGCCTGTCCTCTTGACAGGGTCGTTCTATCGGAAAGTTCTGAGCAGCCAGACATCTTGCTCAATTCTGGTAATGGCTTATGTGAAGCACTGTTTAGTGGATGACGCTTTAAAAGTGTTGAGGGAAAAGGAGTGGAAAGATCATCATTTTGAGGAGAATTTGTATCATTTGCTAATTTGTTCATGTAAAGAGTTGGGCCATCTCGAGAATGCAATTAAGATATACACACAACTGCCTAAACGTGAAAACAAACCGAACTTGCATATCACATGCACAATGATTGATATCTACAGCATCATGGGTAGGTTCTCTGACGGGGAGAAGCTTTATCTAAGCCTGAGATCATCAGGCATTCCTTTGGATTTGATTGCTTATAATGTTGTTGTGAGAATGTATGTTAAAGCTGGATCATTGGAAGATGCATGCTCAGTTCTTGACTTGATGGCTGAGCAGCAGGACATTGTTCCGGACATATATCTGTTACGGGACATGCTTCGTATTTACCAACGATGTGGCATGGTGCATAAGCTAGCAGATCTGTACTATAGGATATTGAAGAGTGGAGTGTCTTGGGATCAGGAAATGTATAATTGTGTCATAAATTGCTGTTCCCGTGCTCTGCCTGTTGATGAGCTTTCTAGGCTTTTTGATGAAATGCTTCAATGTGGTTTTGCCCCAAATACAGTGACCTTGAATGTCATGCTTGACGTTTATGGGAAATCCAAGCTTTTCACTAAGGCTAGAAATCTCTTTGGGCTTGCTCAGAAAAGAGGTTTGGTTGATGCAATCTCTTATAATACTATGATATCTGTCTATGGGAAGAATAAGGACTTCCAAAACATGTCATCTACGGTTCAGAAAATGAAATTTAACGGGTTTTCAGTTTCCCTTGAAGCCTACAATTGTATGTTGGATGCTTATGGCAAAGAATGCCAAATGGAGAATTTCAGAAGTGTCTTGCAGCGAATGCAGGAGACAAGTTCTGAATGTGACCATTATACGTACAACATCATGATCAACATCTATGGAGAACAAGGATGGATAGATGAAGTTGCGGAAGTTCTGACAGAATTGAAAGCATGTGGACTTGAACCCGATCTGTACAGCTACAACACATTGATCAAGGCATATGGAATAGCAGGGATGGTTGAAGAAGCTGCTCAGTTGGTGAAAGAAATGCGAGAAAAGAGGATAGAACCAGATAGGATAACTTATATTAACATGATTAGAGCACTGCAAAGAAACGATCAATTTTTAGAGGCAGTCAAGTGGTCATTGTGGATGAAGCAGATGAAATATTGAAGTTCATAAATGCCAAAACAATGAAACAGTTGTTTGTGTCCTCAAGTCTACCAGCCCCCAGATACAGCCAATGTTCACTATGTCCCGACTCTTGCTCACAATGTATATTGGTAAGCTTTCGTTGTTCCCATCCATGCCATGCTCATCTTATCAAATGTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTATTTCTGCCTCATACTGTAAATCTAGGTCACACACCCTTATTAAAAATATACGTTTAAAATTGTACATCATTTTCATACTAGAAGAAAAATTCAAAGCAAACTAGTTGATGGATTTGTATGCTTAAAAAGTTAATTTGATGTGTTTCATGCAAAATTTATTATTTTAGTCATGTATATGTTATTTTTAGTTTACTAAAACAAGTGTTCTATGCATGTCTAAGATATTTGTTGCTCTAAGAAGTGTCCAATGTATGTCCCACAAGCGTTGAAGTGTCCAAGTCTCTAACATGTACATGTAAGGCAAACTAAAGTGTCTGTTCCTCTTAGAATATGAGTGACATTTTTTAACACACTTTGCTAGGGTAGAGGCTATAATGAATAGGGTATATGTCAATGCAAACTGCATACAGTTCGTAACAGTCATAAAAATATTAACATTCAGCTAGCTGTAGCTGGAACGTCTGCTGGATCAATACGTTTGGTCCAGTGCATAGGATTTGAGAAGAAAGAATAGAAAAACACAGCAACATTGAGAACAGAGTATTGTTGTTGTTGCGCTAATAATGGCCTTGTTTTTTCTTCTTCTGTTGTCTGTAGCGTAGAGGAAACATCAGAGACTGTTTTGTTACTGAGAAAATCCATGGTTTCCTTACAATGCTGCTGCTTGTTGCAAAGTAAGATGTTTGTACGATAAAAAAGATGAATAGTCATAAACCATCATCAGCTGGAGCAGGGATTGTGAGCATTCATGCTTTAAAATGACAACAGAGAAACAATATTTTTATATTCTTTGCATCTGTCTCGATTATTGTAATTCTTTTTTTATCAATACATCAAAAAGAAAAAAAAGAATAAAATTGTATGCCATATTTTCCTCAACCTTTTTGGAAGTGAAGTTTAGGTCTCATTTGGTTACCAAAGAACAAAATGGTTACCAAACAAGACTTTGGTAATTTACTAGCCATTCACAGAACTGACTTCTCCTTTAACATTCACTAACAAAGTTACAATAAGTAATTGTTTAGCTATTATCCATGAACTTAATTGACAAAAGTTAAGCTTGCACTATATTTGAACTATGATTGAATTAAGACATTCAATATTTTCCC

mRNA sequence

ATGGCTTCCCTCAAACTTTCCTTCTCTTTACATTCTTTTGATTCCAATAAGTTCGATTTTCCTCTCAATTCACCTCTGCTCTCTGATTATTGCTCTCTTTTCTCCATCAATGCTCATCTTCATCTCAATAAGTCCTCCATAATTTACTCTCTGGCTAGGGTTCACAAGCCCTCTAAAGTTTCTCAGGTGGAACAGGAGGCGTCCGACGTTTCCCAATCCAGATTTGATGAAATTGTCGCCAGGAAAAAGTATTTTACCGCTAAGAAGCCTTCAAAGAGAGCAGCAGGTTCGCATTTTAGTTTCAGTAGGAATTGTAATGACAATATTCTTTTTAATGGTGGTGAATTGGATGTCAATTACTCAACTATATCCTCTGATTTGAGCTTAGAGGATTGCAATGCTATTTTGAAAAGGCTAGAGAAGTGTAACGATTCCAAAACACTGGGTTTCTTTGAGTGGATGAGAAGTAATGGGAAATTAAAACACAATGTGAGTGCTTATAATTTGGTTCTTCGAGTGTTGGGTAGGCAAGAAGATTGGGATGCTGCCGAGAAGCTAATTGAGGAAGTTAGAGCTGAGTTGGGTTCTCAATTGGATTTTCAGGTTTTTAACACTCTTATCTATGCTTGTTATAAATCGAGGTTTGTGGAGCAGGGTACGAAATGGTTTCGAATGATGTTGGAATGCCAAGTGCAGCCCAATGTCGCAACATTTGGAATGCTTATGGGTCTCTATCAGAAGAAGTGTGATATTAAGGAATCGGAGTTTGCCTTTAATCAGATGAGAAACTTTGGTATTGTTTGTGAAACAGCATATGCATCTATGATTACTATATACATACGTATGAATTTATACGATAAAGCAGAAGAGGTGATTCAATTAATGCAAGAAGATAAAGTGATTCCTAATCTAGAGAACTGGGTAGTAATGCTTAATGCTTATTGTCAGCAAGGCAAAATGGAGGAAGCTGAACTTGTATTTGCCTCAATGGAAGAAGCTGGGTTTTCATCCAATATCATTGCATATAATACCTTGATTACTGGGTATGGGAAGGCATCAAATATGGATACTGCTCAACGCCTGTTCTTGGGCATCAAGAACTCTGGAGTAGAACCTGATGAAACGACTTACCGCTCCATGATTGAAGGTTGGGGTCGAGCTGGTAATTATAAAATGGCAGAATGGTATTATAAGGAGCTCAAGCGGAGAGGATATATGCCGAATTCCTCTAACTTGTTCACCCTCATAAATCTACAAGCCAAACATGAGGATGAAGCAGGTGCACTTAAAACTCTAAATGATATGCTAAAGATTGGATGCCGGCCTTCTTCCATTGTTGGAAATGTTTTGCAAGCATATGAAAAGGCTAGAAGAATGAAAAGTGTGCCTGTCCTCTTGACAGGGTCGTTCTATCGGAAAGTTCTGAGCAGCCAGACATCTTGCTCAATTCTGGTAATGGCTTATGTGAAGCACTGTTTAGTGGATGACGCTTTAAAAGTGTTGAGGGAAAAGGAGTGGAAAGATCATCATTTTGAGGAGAATTTGTATCATTTGCTAATTTGTTCATGTAAAGAGTTGGGCCATCTCGAGAATGCAATTAAGATATACACACAACTGCCTAAACGTGAAAACAAACCGAACTTGCATATCACATGCACAATGATTGATATCTACAGCATCATGGGTAGGTTCTCTGACGGGGAGAAGCTTTATCTAAGCCTGAGATCATCAGGCATTCCTTTGGATTTGATTGCTTATAATGTTGTTGTGAGAATGTATGTTAAAGCTGGATCATTGGAAGATGCATGCTCAGTTCTTGACTTGATGGCTGAGCAGCAGGACATTGTTCCGGACATATATCTGTTACGGGACATGCTTCGTATTTACCAACGATGTGGCATGGTGCATAAGCTAGCAGATCTGTACTATAGGATATTGAAGAGTGGAGTGTCTTGGGATCAGGAAATGTATAATTGTGTCATAAATTGCTGTTCCCGTGCTCTGCCTGTTGATGAGCTTTCTAGGCTTTTTGATGAAATGCTTCAATGTGGTTTTGCCCCAAATACAGTGACCTTGAATGTCATGCTTGACGTTTATGGGAAATCCAAGCTTTTCACTAAGGCTAGAAATCTCTTTGGGCTTGCTCAGAAAAGAGGTTTGGTTGATGCAATCTCTTATAATACTATGATATCTGTCTATGGGAAGAATAAGGACTTCCAAAACATGTCATCTACGGTTCAGAAAATGAAATTTAACGGGTTTTCAGTTTCCCTTGAAGCCTACAATTGTATGTTGGATGCTTATGGCAAAGAATGCCAAATGGAGAATTTCAGAAGTGTCTTGCAGCGAATGCAGGAGACAAGTTCTGAATGTGACCATTATACGTACAACATCATGATCAACATCTATGGAGAACAAGGATGGATAGATGAAGTTGCGGAAGTTCTGACAGAATTGAAAGCATGTGGACTTGAACCCGATCTGTACAGCTACAACACATTGATCAAGGCATATGGAATAGCAGGGATGGTTGAAGAAGCTGCTCAGTTGGTGAAAGAAATGCGAGAAAAGAGGATAGAACCAGATAGGATAACTTATATTAACATGATTAGAGCACTGCAAAGAAACGATCAATTTTTAGAGGCAGTCAAGTGGTCATTGTGGATGAAGCAGATGAAATATTGA

Coding sequence (CDS)

ATGGCTTCCCTCAAACTTTCCTTCTCTTTACATTCTTTTGATTCCAATAAGTTCGATTTTCCTCTCAATTCACCTCTGCTCTCTGATTATTGCTCTCTTTTCTCCATCAATGCTCATCTTCATCTCAATAAGTCCTCCATAATTTACTCTCTGGCTAGGGTTCACAAGCCCTCTAAAGTTTCTCAGGTGGAACAGGAGGCGTCCGACGTTTCCCAATCCAGATTTGATGAAATTGTCGCCAGGAAAAAGTATTTTACCGCTAAGAAGCCTTCAAAGAGAGCAGCAGGTTCGCATTTTAGTTTCAGTAGGAATTGTAATGACAATATTCTTTTTAATGGTGGTGAATTGGATGTCAATTACTCAACTATATCCTCTGATTTGAGCTTAGAGGATTGCAATGCTATTTTGAAAAGGCTAGAGAAGTGTAACGATTCCAAAACACTGGGTTTCTTTGAGTGGATGAGAAGTAATGGGAAATTAAAACACAATGTGAGTGCTTATAATTTGGTTCTTCGAGTGTTGGGTAGGCAAGAAGATTGGGATGCTGCCGAGAAGCTAATTGAGGAAGTTAGAGCTGAGTTGGGTTCTCAATTGGATTTTCAGGTTTTTAACACTCTTATCTATGCTTGTTATAAATCGAGGTTTGTGGAGCAGGGTACGAAATGGTTTCGAATGATGTTGGAATGCCAAGTGCAGCCCAATGTCGCAACATTTGGAATGCTTATGGGTCTCTATCAGAAGAAGTGTGATATTAAGGAATCGGAGTTTGCCTTTAATCAGATGAGAAACTTTGGTATTGTTTGTGAAACAGCATATGCATCTATGATTACTATATACATACGTATGAATTTATACGATAAAGCAGAAGAGGTGATTCAATTAATGCAAGAAGATAAAGTGATTCCTAATCTAGAGAACTGGGTAGTAATGCTTAATGCTTATTGTCAGCAAGGCAAAATGGAGGAAGCTGAACTTGTATTTGCCTCAATGGAAGAAGCTGGGTTTTCATCCAATATCATTGCATATAATACCTTGATTACTGGGTATGGGAAGGCATCAAATATGGATACTGCTCAACGCCTGTTCTTGGGCATCAAGAACTCTGGAGTAGAACCTGATGAAACGACTTACCGCTCCATGATTGAAGGTTGGGGTCGAGCTGGTAATTATAAAATGGCAGAATGGTATTATAAGGAGCTCAAGCGGAGAGGATATATGCCGAATTCCTCTAACTTGTTCACCCTCATAAATCTACAAGCCAAACATGAGGATGAAGCAGGTGCACTTAAAACTCTAAATGATATGCTAAAGATTGGATGCCGGCCTTCTTCCATTGTTGGAAATGTTTTGCAAGCATATGAAAAGGCTAGAAGAATGAAAAGTGTGCCTGTCCTCTTGACAGGGTCGTTCTATCGGAAAGTTCTGAGCAGCCAGACATCTTGCTCAATTCTGGTAATGGCTTATGTGAAGCACTGTTTAGTGGATGACGCTTTAAAAGTGTTGAGGGAAAAGGAGTGGAAAGATCATCATTTTGAGGAGAATTTGTATCATTTGCTAATTTGTTCATGTAAAGAGTTGGGCCATCTCGAGAATGCAATTAAGATATACACACAACTGCCTAAACGTGAAAACAAACCGAACTTGCATATCACATGCACAATGATTGATATCTACAGCATCATGGGTAGGTTCTCTGACGGGGAGAAGCTTTATCTAAGCCTGAGATCATCAGGCATTCCTTTGGATTTGATTGCTTATAATGTTGTTGTGAGAATGTATGTTAAAGCTGGATCATTGGAAGATGCATGCTCAGTTCTTGACTTGATGGCTGAGCAGCAGGACATTGTTCCGGACATATATCTGTTACGGGACATGCTTCGTATTTACCAACGATGTGGCATGGTGCATAAGCTAGCAGATCTGTACTATAGGATATTGAAGAGTGGAGTGTCTTGGGATCAGGAAATGTATAATTGTGTCATAAATTGCTGTTCCCGTGCTCTGCCTGTTGATGAGCTTTCTAGGCTTTTTGATGAAATGCTTCAATGTGGTTTTGCCCCAAATACAGTGACCTTGAATGTCATGCTTGACGTTTATGGGAAATCCAAGCTTTTCACTAAGGCTAGAAATCTCTTTGGGCTTGCTCAGAAAAGAGGTTTGGTTGATGCAATCTCTTATAATACTATGATATCTGTCTATGGGAAGAATAAGGACTTCCAAAACATGTCATCTACGGTTCAGAAAATGAAATTTAACGGGTTTTCAGTTTCCCTTGAAGCCTACAATTGTATGTTGGATGCTTATGGCAAAGAATGCCAAATGGAGAATTTCAGAAGTGTCTTGCAGCGAATGCAGGAGACAAGTTCTGAATGTGACCATTATACGTACAACATCATGATCAACATCTATGGAGAACAAGGATGGATAGATGAAGTTGCGGAAGTTCTGACAGAATTGAAAGCATGTGGACTTGAACCCGATCTGTACAGCTACAACACATTGATCAAGGCATATGGAATAGCAGGGATGGTTGAAGAAGCTGCTCAGTTGGTGAAAGAAATGCGAGAAAAGAGGATAGAACCAGATAGGATAACTTATATTAACATGATTAGAGCACTGCAAAGAAACGATCAATTTTTAGAGGCAGTCAAGTGGTCATTGTGGATGAAGCAGATGAAATATTGA

Homology

[Close]

BLAST of CSPI01G17930 vs. Swiss-Prot
Match: PP342_ARATH (Pentatricopeptide repeat-containing protein At4g30825, chloroplastic OS=Arabidopsis thaliana GN=At4g30825 PE=2 SV=2)

HSP 1 Score: 1077.4 bits (2785), Expect = 0.0e+00
Identity = 548/902 (60.75%), Postives = 678/902 (75.17%), Query Frame = 1


Query: 1   MASLKLSFSLHSFDSNK--FDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPS 60
           M SL+ S  L  FDS +  F F  N     D   +  + + +H  ++S I S  RV    
Sbjct: 1   MGSLRFSIPLDPFDSKRKRFHFSANPSQFPDQFPIHFVTSSIHATRASSIGSSTRVLDKI 60

Query: 61  KVSQVEQEASDVSQSRFDEIVARK----KYFTAKKPSKRAAGSHFSFSRNCND----NIL 120
           +VS +  EA++ + +        +    K    ++ +K+     FSF R  ND    N+ 
Sbjct: 61  RVSSLGTEANENAINSASAAPVERSRSSKLSGDQRGTKKYVARKFSFRRGSNDLELENLF 120

Query: 121 FNGGELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLV 180
            N GE+DVNYS I    SLE CN ILKRLE C+D+  + FF+WMR NGKL  N  AY+L+
Sbjct: 121 VNNGEIDVNYSAIKPGQSLEHCNGILKRLESCSDTNAIKFFDWMRCNGKLVGNFVAYSLI 180

Query: 181 LRVLGRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQ 240
           LRVLGR+E+WD AE LI+E+      Q  +QVFNT+IYAC K   V+  +KWF MMLE  
Sbjct: 181 LRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFG 240

Query: 241 VQPNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEE 300
           V+PNVAT GMLMGLYQK  +++E+EFAF+ MR FGIVCE+AY+SMITIY R+ LYDKAEE
Sbjct: 241 VRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTRLRLYDKAEE 300

Query: 301 VIQLMQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYG 360
           VI LM++D+V   LENW+VMLNAY QQGKME AE +  SME AGFS NIIAYNTLITGYG
Sbjct: 301 VIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYG 360

Query: 361 KASNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSS 420
           K   M+ AQ LF  + N G+EPDET+YRSMIEGWGRA NY+ A+ YY+ELKR GY PNS 
Sbjct: 361 KIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSF 420

Query: 421 NLFTLINLQAKHEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSF 480
           NLFTLINLQAK+ D  GA+KT+ DM  IGC+ SSI+G +LQAYEK  ++  VP +L GSF
Sbjct: 421 NLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSF 480

Query: 481 YRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLE 540
           +  +  +QTS S LVMAYVKH +VDD L +LREK+W+D  FE +LYHLLICSCKE G L 
Sbjct: 481 HNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLT 540

Query: 541 NAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVV 600
           +A+KIY    + + + NLHIT TMIDIY++MG FS+ EKLYL+L+SSG+ LD I +++VV
Sbjct: 541 DAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVV 600

Query: 601 RMYVKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGV 660
           RMYVKAGSLE+ACSVL++M EQ+DIVPD+YL RDMLRIYQ+C +  KL  LYYRI KSG+
Sbjct: 601 RMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGI 660

Query: 661 SWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARN 720
            W+QEMYNCVINCC+RALP+DELS  F+EM++ GF PNTVT NV+LDVYGK+KLF K   
Sbjct: 661 HWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNE 720

Query: 721 LFGLAQKRGLVDAISYNTMISVYGKNKDFQNMSSTVQKMKFNGFSVSLEAYNCMLDAYGK 780
           LF LA++ G+VD ISYNT+I+ YGKNKD+ NMSS ++ M+F+GFSVSLEAYN +LDAYGK
Sbjct: 721 LFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGK 780

Query: 781 ECQMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYS 840
           + QME FRS+L+RM++++S  DHYTYNIMINIYGEQGWIDEVA+VL ELK  GL PDL S
Sbjct: 781 DKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCS 840

Query: 841 YNTLIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKWSLWMK 893
           YNTLIKAYGI GMVEEA  LVKEMR + I PD++TY N++ AL+RND+FLEA+KWSLWMK
Sbjct: 841 YNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMK 900

[Close]

BLAST of CSPI01G17930 vs. Swiss-Prot
Match: PP217_ARATH (Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 1.7e-48
Identity = 164/751 (21.84%), Postives = 334/751 (44.47%), Query Frame = 1


Query: 135 ILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDWDAAEKLIEEVR-AE 194
           +L+RL+  N  + + +F W     +L H   +YN +L V+ R  ++DA ++++ E+  A 
Sbjct: 71  VLRRLKDVN--RAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAG 130

Query: 195 LGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGMLMGLYQKKCDIKE 254
            G  ++  +   ++  C K+  + +G    +MM + + +P  + +  L+G +        
Sbjct: 131 FGPSVNTCI--EMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDM 190

Query: 255 SEFAFNQMRNFGIVCET-AYASMITIYIRMNLYDKAEEVIQLMQEDKVIPNLENWVVMLN 314
               F QM+  G       + ++I  + +    D A  ++  M+   +  ++  + V ++
Sbjct: 191 MLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCID 250

Query: 315 AYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQRLFLGIKNSGVEP 374
           ++ + GK++ A   F  +E  G   + + Y ++I    KA+ +D A  +F  ++ +   P
Sbjct: 251 SFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVP 310

Query: 375 DETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQAKHEDEAGALKTL 434
               Y +MI G+G AG +  A    +  + +G +P+      ++    K      ALK  
Sbjct: 311 CTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVF 370

Query: 435 NDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLSSQTSCSILVMAYVKHC 494
            +M K      S    ++    +A ++ +   L        +  +  + +I+V    K  
Sbjct: 371 EEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQ 430

Query: 495 LVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLPKRENKPNLHITC 554
            +D+A  +  E ++K    +E  +  LI    ++G +++A K+Y ++   + + N  +  
Sbjct: 431 KLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYT 490

Query: 555 TMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLEDACSVLDLMAEQ 614
           ++I  +   GR  DG K+Y  + +     DL   N  +    KAG  E   ++ + +  +
Sbjct: 491 SLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKAR 550

Query: 615 QDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCVINCCSRALPVDE 674
           +  VPD      ++    + G  ++  +L+Y + + G   D   YN VI+   +   V++
Sbjct: 551 R-FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNK 610

Query: 675 LSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQ-KRGLVDAISYNTMIS 734
             +L +EM   GF P  VT   ++D   K     +A  LF  A+ KR  ++ + Y+++I 
Sbjct: 611 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 670

Query: 735 VYGKNKDFQNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRMQETSSEC 794
            +GK          ++++   G + +L  +N +LDA  K  ++       Q M+E     
Sbjct: 671 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 730

Query: 795 DHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTLIKAYGIAGMVEEAAQLV 854
           +  TY I+IN   +    ++      E++  G++P   SY T+I     AG + EA  L 
Sbjct: 731 NQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALF 790

Query: 855 KEMREKRIEPDRITYINMIRALQRNDQFLEA 883
              +     PD   Y  MI  L   ++ ++A
Sbjct: 791 DRFKANGGVPDSACYNAMIEGLSNGNRAMDA 816

[Close]

BLAST of CSPI01G17930 vs. Swiss-Prot
Match: PP344_ARATH (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 4.9e-48
Identity = 172/745 (23.09%), Postives = 339/745 (45.50%), Query Frame = 1


Query: 139  LEKCNDSKTLG----FFEWMRSNGKLKHNVSAYNLVLRVLGRQEDWDAAEKLIEEVRAEL 198
            L++ +D++ L     F+  M  +G +  +V  + +++  L +  ++  A   ++ +R + 
Sbjct: 335  LDRFSDNRDLDSVKQFWSEMEKDGHVP-DVVTFTILVDALCKAGNFGEAFDTLDVMRDQ- 394

Query: 199  GSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGMLMGLYQKKCDIKES 258
            G   +   +NTLI    +   ++   + F  M    V+P   T+ + +  Y K  D   +
Sbjct: 395  GILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSA 454

Query: 259  EFAFNQMRNFGIVCETAYASMITIYIRMNLYDK-AEEVIQLMQEDKVIPNLENWVVMLNA 318
               F +M+  GI       +     +     D+ A+++   +++  ++P+   + +M+  
Sbjct: 455  LETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKC 514

Query: 319  YCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQRLFLGIKNSGVEPD 378
            Y + G+++EA  + + M E G   ++I  N+LI    KA  +D A ++F+ +K   ++P 
Sbjct: 515  YSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPT 574

Query: 379  ETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQAKHEDEAGALKTLN 438
              TY +++ G G+ G  + A   ++ + ++G  PN+    TL +   K+++   ALK L 
Sbjct: 575  VVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLF 634

Query: 439  DMLKIGCRPSSIVGN-VLQAYEKARRMKSVPVLLTGSFYRKVLSSQTSCSILVMAYVKHC 498
             M+ +GC P     N ++    K  ++K   +       + V     +   L+   VK  
Sbjct: 635  KMMDMGCVPDVFTYNTIIFGLVKNGQVKEA-MCFFHQMKKLVYPDFVTLCTLLPGVVKAS 694

Query: 499  LVDDALKVLREKEWKDHHFEENLY-HLLICSCKELGHLENAIKIYTQLPKRENKPNLHIT 558
            L++DA K++    +       NL+   LI S      ++NA+    +L       +    
Sbjct: 695  LIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSI 754

Query: 559  CTMIDIYSIMGRFSDGEKLYLS--LRSSGIPLDLIAYNVVVRMYVKAGSLEDACSVLDLM 618
               I  YS       G +       +  G+   L  YN+++   ++A  +E A  V  L 
Sbjct: 755  LVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVF-LQ 814

Query: 619  AEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCVINCCSRALP 678
             +    +PD+     +L  Y + G + +L +LY  +       +   +N VI+   +A  
Sbjct: 815  VKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGN 874

Query: 679  VDE-LSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLF-GLAQKRGLVDAISYN 738
            VD+ L   +D M    F+P   T   ++D   KS    +A+ LF G+       +   YN
Sbjct: 875  VDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYN 934

Query: 739  TMISVYGKNKDFQNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRMQET 798
             +I+ +GK  +     +  ++M   G    L+ Y+ ++D      +++      + ++E+
Sbjct: 935  ILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES 994

Query: 799  SSECDHYTYNIMINIYGEQGWIDEVAEVLTELKAC-GLEPDLYSYNTLIKAYGIAGMVEE 858
                D   YN++IN  G+   ++E   +  E+K   G+ PDLY+YN+LI   GIAGMVEE
Sbjct: 995  GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE 1054

Query: 859  AAQLVKEMREKRIEPDRITYINMIR 872
            A ++  E++   +EP+  T+  +IR
Sbjct: 1055 AGKIYNEIQRAGLEPNVFTFNALIR 1075

[Close]

BLAST of CSPI01G17930 vs. Swiss-Prot
Match: PP362_ARATH (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 4.2e-47
Identity = 139/589 (23.60%), Postives = 269/589 (45.67%), Query Frame = 1


Query: 304 LENWVV--MLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQRL 363
           L+N VV  +++   ++G++  A  +F  ++E GFS ++ +Y +LI+ +  +     A  +
Sbjct: 171 LDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNV 230

Query: 364 FLGIKNSGVEPDETTYRSMIEGWGRAGN-YKMAEWYYKELKRRGYMPNSSNLFTLINLQA 423
           F  ++  G +P   TY  ++  +G+ G  +       +++K  G  P++    TLI    
Sbjct: 231 FKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCK 290

Query: 424 KHEDEAGALKTLNDMLKIGCRPSSIVGN-VLQAYEKARRMKSVPVLLTGSFYRKVLSSQT 483
           +      A +   +M   G     +  N +L  Y K+ R K    +L          S  
Sbjct: 291 RGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIV 350

Query: 484 SCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQL 543
           + + L+ AY +  ++D+A+++  +   K    +   Y  L+   +  G +E+A+ I+ ++
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410

Query: 544 PKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSL 603
                KPN+      I +Y   G+F++  K++  +   G+  D++ +N ++ ++ + G  
Sbjct: 411 RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMD 470

Query: 604 EDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNC 663
            +   V   M ++   VP+      ++  Y RCG   +   +Y R+L +GV+ D   YN 
Sbjct: 471 SEVSGVFKEM-KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNT 530

Query: 664 VINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSK----LFTKARNLF-GL 723
           V+   +R    ++  ++  EM      PN +T   +L  Y   K    + + A  ++ G+
Sbjct: 531 VLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV 590

Query: 724 AQKRGLVDAISYNTMISVYGKNKDFQNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQM 783
            + R    A+   T++ V  K            ++K  GFS  +   N M+  YG+   +
Sbjct: 591 IEPR----AVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMV 650

Query: 784 ENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTL 843
                VL  M+E        TYN ++ ++       +  E+L E+ A G++PD+ SYNT+
Sbjct: 651 AKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTV 710

Query: 844 IKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAV 884
           I AY     + +A+++  EMR   I PD ITY   I +   +  F EA+
Sbjct: 711 IYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAI 754

[Close]

BLAST of CSPI01G17930 vs. Swiss-Prot
Match: PP325_ARATH (Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2 SV=2)

HSP 1 Score: 169.5 bits (428), Expect = 1.7e-40
Identity = 137/577 (23.74%), Postives = 259/577 (44.89%), Query Frame = 1


Query: 275 MITIYIRMNLYDKAEEVIQLMQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEAG 334
           ++T  +R N + K  E   ++ +  V P++  +   +NA+C+ GK+EEA  +F+ MEEAG
Sbjct: 245 LLTSLVRANEFQKCCEAFDVVCKG-VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG 304

Query: 335 FSSNIIAYNTLITGYGKASNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAE 394
            + N++ +NT+I G G     D A      +   G+EP   TY  +++G  RA     A 
Sbjct: 305 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 364

Query: 395 WYYKELKRRGYMPNSSNLFTLIN--LQAKHEDEAGALKTLNDMLKIGCR-PSSIVGNVLQ 454
           +  KE+ ++G+ PN      LI+  ++A   ++A  +K L  M+  G    SS    +++
Sbjct: 365 FVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDL--MVSKGLSLTSSTYNTLIK 424

Query: 455 AYEKARRMKSVPVLLTGSFYRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHF 514
            Y K  +  +   LL          +Q S + ++     H + D AL+ + E   ++   
Sbjct: 425 GYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSP 484

Query: 515 EENLYHLLICSCKELGHLENAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLY 574
              L   LI    + G    A++++ Q   +    +   +  ++      G+  +  ++ 
Sbjct: 485 GGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQ 544

Query: 575 LSLRSSGIPLDLIAYNVVVRMYVKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQR 634
             +   G  +D ++YN ++        L++A   LD M  ++ + PD Y    ++     
Sbjct: 545 KEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV-KRGLKPDNYTYSILICGLFN 604

Query: 635 CGMVHKLADLYYRILKSGVSWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVT 694
              V +    +    ++G+  D   Y+ +I+ C +A   +E    FDEM+     PNTV 
Sbjct: 605 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 664

Query: 695 LNVMLDVYGKSKLFTKARNLFGLAQKRGL-VDAISYNTMISVYGKNKDFQNMSSTVQKMK 754
            N ++  Y +S   + A  L    + +G+  ++ +Y ++I         +      ++M+
Sbjct: 665 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 724

Query: 755 FNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWID 814
             G   ++  Y  ++D YGK  QM     +L+ M   +   +  TY +MI  Y   G + 
Sbjct: 725 MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVT 784

Query: 815 EVAEVLTELKACGLEPDLYSYNTLIKAYGIAGMVEEA 848
           E + +L E++  G+ PD  +Y   I  Y   G V EA
Sbjct: 785 EASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 817

[Close]

BLAST of CSPI01G17930 vs. TrEMBL
Match: A0A0A0LTR9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G257890 PE=4 SV=1)

HSP 1 Score: 1786.9 bits (4627), Expect = 0.0e+00
Identity = 890/894 (99.55%), Postives = 893/894 (99.89%), Query Frame = 1


Query: 1   MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV 60
           MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV
Sbjct: 1   MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV 60

Query: 61  SQVEQEASDVSQSRFDEIVARKKYFTAKKPSKRAAGSHFSFSRNCNDNILFNGGELDVNY 120
           SQVEQ+ASDVSQSRFDEIVARKKYFT+KKPSKRAAGSHFSFSRNCNDNILFNGGELDVNY
Sbjct: 61  SQVEQDASDVSQSRFDEIVARKKYFTSKKPSKRAAGSHFSFSRNCNDNILFNGGELDVNY 120

Query: 121 STISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDW 180
           STISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDW
Sbjct: 121 STISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDW 180

Query: 181 DAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGM 240
           DAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGM
Sbjct: 181 DAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGM 240

Query: 241 LMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQEDKV 300
           LMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQEDKV
Sbjct: 241 LMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQEDKV 300

Query: 301 IPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQR 360
           IPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQR
Sbjct: 301 IPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQR 360

Query: 361 LFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQA 420
           LFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQA
Sbjct: 361 LFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQA 420

Query: 421 KHEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLSSQTS 480
           KHEDEAG LKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLSSQTS
Sbjct: 421 KHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLSSQTS 480

Query: 481 CSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLP 540
           CSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLP
Sbjct: 481 CSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLP 540

Query: 541 KRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLE 600
           KRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLE
Sbjct: 541 KRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLE 600

Query: 601 DACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCV 660
           DACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCV
Sbjct: 601 DACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCV 660

Query: 661 INCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGL 720
           INCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGL
Sbjct: 661 INCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGL 720

Query: 721 VDAISYNTMISVYGKNKDFQNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSV 780
           VDAISYNTMISVYGKNKDF+NMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSV
Sbjct: 721 VDAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSV 780

Query: 781 LQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTLIKAYGI 840
           LQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTLIKAYGI
Sbjct: 781 LQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTLIKAYGI 840

Query: 841 AGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKWSLWMKQMKY 895
           AGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKWSLWMKQMKY
Sbjct: 841 AGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKWSLWMKQMKY 894

[Close]

BLAST of CSPI01G17930 vs. TrEMBL
Match: B9SQY5_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1406220 PE=4 SV=1)

HSP 1 Score: 1194.1 bits (3088), Expect = 0.0e+00
Identity = 601/918 (65.47%), Postives = 739/918 (80.50%), Query Frame = 1


Query: 1   MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV 60
           MASL+L+ SL +FDS K +F  N   LS + S FSI++      + II +L     P KV
Sbjct: 37  MASLRLTISLDTFDSKKPNFSRNPLQLSTHTSPFSISSSTPSPGACIITTLT-TFSPVKV 96

Query: 61  SQVEQEA--SDVSQSRFDEIV------------------ARKKYFT-AKKPSKRAAGSHF 120
           S++E E    DV  S  +++                    RKKY   AKK  KR  G  F
Sbjct: 97  SRIETELFEDDVVLSTSNDLPHECINEGLIDRNPNSKREIRKKYRGGAKKRGKRKVGFKF 156

Query: 121 SFSRNCND----NILFNGGELDVNYSTISSDLSLEDCNAILKRLEKCN-DSKTLGFFEWM 180
           ++ RN  +    ++   GGELDVNYS I  +LSLE CN ILKRLE+C+ D K+L FFEWM
Sbjct: 157 NYKRNGIEQEIEDLFVEGGELDVNYSVIHCNLSLEHCNLILKRLERCSSDDKSLRFFEWM 216

Query: 181 RSNGKLKHNVSAYNLVLRVLGRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSR 240
           R+NGKL+ N++AYN++LRVLGR+EDW  AE++I EV    GS+LDF+VFNTLIYAC +  
Sbjct: 217 RNNGKLEKNLNAYNVILRVLGRREDWGTAERMIGEVSDSFGSELDFRVFNTLIYACSRRG 276

Query: 241 FVEQGTKWFRMMLECQVQPNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYAS 300
            +  G KWFRMMLE  VQPN+ATFGMLMGLYQK  +++E+EF F++MR+FGI+C++AY++
Sbjct: 277 NMLLGGKWFRMMLELGVQPNIATFGMLMGLYQKGWNVEEAEFVFSKMRSFGIICQSAYSA 336

Query: 301 MITIYIRMNLYDKAEEVIQLMQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEAG 360
           MITIY R++LY+KAEE+I LM EDKV  N+ENW+V+LNAY QQG++EEAE V   M+EA 
Sbjct: 337 MITIYTRLSLYNKAEEIIGLMGEDKVAMNVENWLVLLNAYSQQGRLEEAEQVLVEMQEAS 396

Query: 361 FSSNIIAYNTLITGYGKASNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAE 420
           FS NI+A+NTLITGYGK SNM  AQRLFL I+N+G+EPDETTYRSMIEGWGR GNYK AE
Sbjct: 397 FSPNIVAFNTLITGYGKLSNMAAAQRLFLDIQNAGLEPDETTYRSMIEGWGRTGNYKEAE 456

Query: 421 WYYKELKRRGYMPNSSNLFTLINLQAKHEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYE 480
           WYYKELKR GYMPNSSNL+TLINLQAKH+D+ GA+ TL+DMLKIGC+ SSI+G +L+AYE
Sbjct: 457 WYYKELKRLGYMPNSSNLYTLINLQAKHDDDEGAIGTLDDMLKIGCQHSSILGTLLKAYE 516

Query: 481 KARRMKSVPVLLTGSFYRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEEN 540
           KA R+  VP+LL  SFY+ VL +QTSCSILVM YVK+CLVD+ALKVL +K+WKD  FE+N
Sbjct: 517 KAGRINKVPLLLKDSFYQHVLVNQTSCSILVMTYVKNCLVDEALKVLGDKKWKDQTFEDN 576

Query: 541 LYHLLICSCKELGHLENAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSL 600
           LYHLLICSCKELG+LE+A++IYTQ+PK E+KPNLHI+CT+IDIYS++G F++ EKLY  L
Sbjct: 577 LYHLLICSCKELGNLESAVRIYTQMPKSEDKPNLHISCTVIDIYSVLGCFAEAEKLYQQL 636

Query: 601 RSSGIPLDLIAYNVVVRMYVKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGM 660
           + SGI LD++A+++VVRMYVKAGSL+DACSVL  M +Q++I+PDIYL RDMLRIYQ+CGM
Sbjct: 637 KCSGIALDMVAFSIVVRMYVKAGSLKDACSVLATMEKQENIIPDIYLYRDMLRIYQQCGM 696

Query: 661 VHKLADLYYRILKSGVSWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNV 720
           + KL DLY++ILKS V WDQE+YNC+INCC+RALPV ELSRLF EMLQ GF+PNT+T NV
Sbjct: 697 MSKLKDLYHKILKSEVDWDQELYNCIINCCARALPVGELSRLFSEMLQRGFSPNTITFNV 756

Query: 721 MLDVYGKSKLFTKARNLFGLAQKRGLVDAISYNTMISVYGKNKDFQNMSSTVQKMKFNGF 780
           MLDVYGK+KLF KA+ LF +A+KRGLVD ISYNT+I+ YG NKDF+NM+S V+ M+F+GF
Sbjct: 757 MLDVYGKAKLFNKAKELFWMARKRGLVDVISYNTVIAAYGHNKDFKNMASAVRNMQFDGF 816

Query: 781 SVSLEAYNCMLDAYGKECQMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAE 840
           SVSLEAYNCMLD YGKE QME FR+VLQRM+++S   DHYTYNIMINIYGEQGWIDEVA 
Sbjct: 817 SVSLEAYNCMLDGYGKEGQMECFRNVLQRMKQSSYTSDHYTYNIMINIYGEQGWIDEVAG 876

Query: 841 VLTELKACGLEPDLYSYNTLIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQ 893
           VLTEL+ CGL PDL SYNTLIKAYG+AGMVE+A  LVKEMRE  IEPD+ITY N+I ALQ
Sbjct: 877 VLTELRECGLRPDLCSYNTLIKAYGVAGMVEDAIDLVKEMRENGIEPDKITYSNLITALQ 936

[Close]

BLAST of CSPI01G17930 vs. TrEMBL
Match: M5VU43_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019391mg PE=4 SV=1)

HSP 1 Score: 1192.2 bits (3083), Expect = 0.0e+00
Identity = 572/764 (74.87%), Postives = 668/764 (87.43%), Query Frame = 1


Query: 129 LEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDWDAAEKLIE 188
           LE CN ILKRLE+C+D KTL FFEWMRSNGKL+ NVSA+NLVLRV+GR+EDWD AEKL++
Sbjct: 1   LEHCNDILKRLERCSDVKTLRFFEWMRSNGKLERNVSAFNLVLRVMGRREDWDGAEKLVQ 60

Query: 189 EVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGMLMGLYQKK 248
           EV A+LG +L++QVFNTLIYAC K   +E G KWFRMMLE +VQPN+ATFGMLM LYQK 
Sbjct: 61  EVIADLGCELNYQVFNTLIYACCKLGRLELGGKWFRMMLEHEVQPNIATFGMLMVLYQKG 120

Query: 249 CDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQEDKVIPNLENWV 308
            +++E+EF F QMRNFGI+C++AY+SMITIY R+NL++KAEE+I L++ED+V  NL+NW+
Sbjct: 121 WNVEEAEFTFFQMRNFGILCQSAYSSMITIYTRLNLFEKAEEIIGLLKEDRVRLNLDNWL 180

Query: 309 VMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQRLFLGIKNS 368
           VM+NAYCQQGK+++AELV  SM+EAGFS NIIAYNTLITGYGKAS MD A  LF GIKN+
Sbjct: 181 VMINAYCQQGKVDDAELVLVSMQEAGFSPNIIAYNTLITGYGKASKMDAADHLFQGIKNA 240

Query: 369 GVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQAKHEDEAGA 428
           G+EPDETTYRSMIEGWGRA NY  AEWYYKELKR GY PNSSNL+TLINLQAKHEDE GA
Sbjct: 241 GLEPDETTYRSMIEGWGRADNYMEAEWYYKELKRLGYKPNSSNLYTLINLQAKHEDEEGA 300

Query: 429 LKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLSSQTSCSILVMAY 488
           ++TL+DML +GC+ SSI+G +LQAYEKA R+  VP LL GSFY+ +L SQTSCSILVMAY
Sbjct: 301 IRTLDDMLTMGCQYSSILGTLLQAYEKAGRVDKVPRLLRGSFYQHILVSQTSCSILVMAY 360

Query: 489 VKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLPKRENKPNL 548
           VKHCLVDD +KVLREK WKD  FE+NLYHLLICSCKELGHLENA+KIY Q+P+ ++KPN+
Sbjct: 361 VKHCLVDDTMKVLREKLWKDPPFEDNLYHLLICSCKELGHLENAVKIYKQMPRYDDKPNM 420

Query: 549 HITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLEDACSVLDL 608
           HI CTMIDIY IMG F++ EK+Y+ L+SSG+ LD+IAY++ VRMYVKAG+LEDACSVLD 
Sbjct: 421 HIMCTMIDIYIIMGLFTEAEKIYVELKSSGVALDMIAYSIAVRMYVKAGALEDACSVLDT 480

Query: 609 MAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCVINCCSRAL 668
           M +Q+ IVPDIY+ RDMLRIYQRCG + KL DLYY++LKSGV+WDQEMYNCVINCCSRAL
Sbjct: 481 MDKQEGIVPDIYMFRDMLRIYQRCGRLDKLKDLYYKLLKSGVTWDQEMYNCVINCCSRAL 540

Query: 669 PVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGLVDAISYNT 728
           PVDE+S +FDEMLQCGF PNT+T NVMLDVYGK+KL  KAR LF +AQK GLVD ISYNT
Sbjct: 541 PVDEISEIFDEMLQCGFVPNTITFNVMLDVYGKAKLLKKARKLFWMAQKWGLVDMISYNT 600

Query: 729 MISVYGKNKDFQNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRMQETS 788
           +I+ YG+NKD +NMSST  +M+F GFSVSLEAYN MLDAYGKE QME FRSVLQRM+ETS
Sbjct: 601 IIAAYGRNKDLRNMSSTFGEMQFKGFSVSLEAYNTMLDAYGKESQMERFRSVLQRMKETS 660

Query: 789 SECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTLIKAYGIAGMVEEAA 848
              DHYTYNIMINIYGEQGWIDEVA+VLTELK CGL PDL SYNTLIKAYGIAGMVE+A 
Sbjct: 661 CASDHYTYNIMINIYGEQGWIDEVADVLTELKECGLGPDLCSYNTLIKAYGIAGMVEDAV 720

Query: 849 QLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKWSLWMKQM 893
            LVKEMRE  I+PD+ITYIN+I AL++ND++LEAVKWSLWMKQM
Sbjct: 721 HLVKEMRENGIQPDKITYINLINALRKNDEYLEAVKWSLWMKQM 764

[Close]

BLAST of CSPI01G17930 vs. TrEMBL
Match: V4UR41_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007430mg PE=4 SV=1)

HSP 1 Score: 1182.5 bits (3058), Expect = 0.0e+00
Identity = 580/831 (69.80%), Postives = 694/831 (83.51%), Query Frame = 1


Query: 66  EASDVSQSRFDEIVARKKYFTAKKPSKRAAGSHFSFSRNCNDN----ILFNGGELDVNYS 125
           E S+VS+        +K  +  KK SKR       F R+  +        N GELDVNYS
Sbjct: 23  ECSNVSRK------VKKGRYGVKKGSKRDVDMSLRFRRSAREQEREYFFANDGELDVNYS 82

Query: 126 TISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDWD 185
            I +DLSL++CNAILKRLEK +DSK+L FFEWMR+NGKL+ NV AYNLVLRV  R+EDWD
Sbjct: 83  VIGADLSLDECNAILKRLEKYSDSKSLKFFEWMRTNGKLEKNVIAYNLVLRVFSRREDWD 142

Query: 186 AAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGML 245
           AAEK+I EVR  LG++L+FQ+FNTLIYAC K   VE G KWF MMLEC VQPNVATFGML
Sbjct: 143 AAEKMIREVRMSLGTKLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGML 202

Query: 246 MGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQEDKVI 305
           MGLY+K   ++E+EFAFNQMR  G+VCE+AY++MITIY R++LY+KAEEVI+L++EDKV+
Sbjct: 203 MGLYKKSWSVEEAEFAFNQMRKLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVV 262

Query: 306 PNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQRL 365
           PNLENW+VMLNAY QQGK+EEAELV  SM EAGFS NI+AYNTLITGYGK SNMD +QRL
Sbjct: 263 PNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLITGYGKVSNMDASQRL 322

Query: 366 FLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQAK 425
           FL IK+ G+EPDETTYRSMIEGWGRAGNY+ A+WYYKELK  GY PN+SNL+TLINLQAK
Sbjct: 323 FLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLQAK 382

Query: 426 HEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLSSQTSC 485
           +EDE GA+ TL+DMLK+GC+ SSI+G +LQAYEKA R  +VP +L GS Y+ VL + TSC
Sbjct: 383 YEDEEGAVNTLDDMLKMGCQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSC 442

Query: 486 SILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLPK 545
           SILVMAYVKH L+DDA+KV+ +K WKD  FE+NLYHLLICSCK+ GHL NA+KIY+ +  
Sbjct: 443 SILVMAYVKHGLIDDAMKVMGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHI 502

Query: 546 RENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLED 605
            + KPNLHI CTMID YS+MG F++ EKLYL+L+SSGI LDLIA+ VVVRMYVKAGSL+D
Sbjct: 503 CDGKPNLHIMCTMIDTYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKD 562

Query: 606 ACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCVI 665
           AC+VL+ M +Q+DI PD YL  DMLRIYQ+CGM+ KL+ LYY+ILKSG++W+QE+Y+CVI
Sbjct: 563 ACAVLETMEKQKDIEPDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVI 622

Query: 666 NCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGLV 725
           NCC+RALP+DELSR+FDEMLQ GF PN +TLNVMLD+YGK+KLF + R LF +A+K GLV
Sbjct: 623 NCCARALPIDELSRVFDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLV 682

Query: 726 DAISYNTMISVYGKNKDFQNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSVL 785
           D ISYNT+I+ YG+NK+ ++MSSTVQ+M+F+GFSVSLEAYN MLDAYGKE QMENF++VL
Sbjct: 683 DVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVL 742

Query: 786 QRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTLIKAYGIA 845
           +RM+ETS   DHYTYNIMI+IYGEQGWI+EV  VLTELK CGL PDL SYNTLIKAYGIA
Sbjct: 743 RRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIA 802

Query: 846 GMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKWSLWMKQM 893
           GMVE+A  LVKEMRE  IEPD+ITY NMI ALQRND+FLEA+KWSLWMKQ+
Sbjct: 803 GMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQI 847

[Close]

BLAST of CSPI01G17930 vs. TrEMBL
Match: A0A067L3T5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04067 PE=4 SV=1)

HSP 1 Score: 1178.7 bits (3048), Expect = 0.0e+00
Identity = 587/917 (64.01%), Postives = 729/917 (79.50%), Query Frame = 1


Query: 1   MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV 60
           MASL+L  SL  FDS K +F  N    S Y S FSI++ +   ++ II +++R   P  V
Sbjct: 1   MASLRLPISLDKFDSKKSNFSRNPHQFSTYTSTFSISSCILSTRACIIATVSRF-SPINV 60

Query: 61  SQVEQEASDVSQSRFDEIV------------------ARKKYFTAKKPSKRAAGSHFSFS 120
           S++E E S+   S   ++V                   +KKY   K+  KR  G  F + 
Sbjct: 61  SRLETELSEKVLSTTSDLVHETINEDLVEQNQDLKREIKKKYKGGKRGMKRQEGLKFRYK 120

Query: 121 RNCND----NILFNGGELDVNYSTISSDLSLEDCNAILKRLEKCN---DSKTLGFFEWMR 180
           RN ++    +   +  E DVNYS I S+LSLE CN ILKRLE C+   +SKTL FFEWMR
Sbjct: 121 RNGSEPNIEDFFVHDSEFDVNYSVIKSNLSLEQCNYILKRLEGCSSDSESKTLRFFEWMR 180

Query: 181 SNGKLKHNVSAYNLVLRVLGRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRF 240
           SN KL+ NVSAYN +LRVLGR EDWD+AE++I EV      +LDF++FN+LIY C K   
Sbjct: 181 SNRKLEKNVSAYNTILRVLGRMEDWDSAERMIREVGDRFSDELDFRIFNSLIYVCTKRGH 240

Query: 241 VEQGTKWFRMMLECQVQPNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASM 300
           ++ G KWFRMMLE  VQPN+ATFGMLMGLYQK  +++E+EF F +MR+FGIVC++AY++M
Sbjct: 241 MKFGGKWFRMMLELGVQPNIATFGMLMGLYQKGWNVEEAEFVFAKMRSFGIVCQSAYSAM 300

Query: 301 ITIYIRMNLYDKAEEVIQLMQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGF 360
           ITIY R++LYDKAE+VI LM+EDKV+ NLENW+V+LNAY QQG++EEAE VF +M+EA  
Sbjct: 301 ITIYTRLSLYDKAEQVIGLMREDKVVLNLENWLVLLNAYSQQGRLEEAEQVFVAMQEANL 360

Query: 361 SSNIIAYNTLITGYGKASNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEW 420
           S NI+AYNTLITGYGK+SNM  AQR+F+ I+N G+EPDETTYRSMIEGWGR G+YK AE 
Sbjct: 361 SPNIVAYNTLITGYGKSSNMAAAQRVFVDIQNVGLEPDETTYRSMIEGWGRIGSYKEAEL 420

Query: 421 YYKELKRRGYMPNSSNLFTLINLQAKHEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYEK 480
           Y+KELKR G+ PNSSNL+TLINLQAKH DE GA++TL DMLKIGC+  SI+G +L+AYEK
Sbjct: 421 YFKELKRLGFKPNSSNLYTLINLQAKHGDEEGAIRTLEDMLKIGCQYPSILGTLLKAYEK 480

Query: 481 ARRMKSVPVLLTGSFYRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENL 540
           A R+  VP+LL GSFY  VL +QTSCS LVMAYVKHCLVDDALKVL +K+W D  FE+NL
Sbjct: 481 AGRINKVPLLLKGSFYHHVLVNQTSCSTLVMAYVKHCLVDDALKVLGDKQWNDPVFEDNL 540

Query: 541 YHLLICSCKELGHLENAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLR 600
           YHLLICSCKELG+LENA+KIYTQ+PK ++K NLHI+CTMIDIY  +G F +G+KLYL ++
Sbjct: 541 YHLLICSCKELGYLENAVKIYTQMPKSDDKLNLHISCTMIDIYGALGLFFEGDKLYLKIK 600

Query: 601 SSGIPLDLIAYNVVVRMYVKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMV 660
           SSGI LD+IAY++VVRMYVKAGSL+ ACSVL+ M +Q+DI+PDIYL RDMLRIYQ+CGM+
Sbjct: 601 SSGISLDMIAYSIVVRMYVKAGSLKAACSVLETMEKQKDIIPDIYLFRDMLRIYQQCGMM 660

Query: 661 HKLADLYYRILKSGVSWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVM 720
            KL DLYY+IL+S V WDQE+YNCVINCC+RA+P+D+LS LF+EML  GF+PNT+T NVM
Sbjct: 661 SKLKDLYYKILRSEVVWDQELYNCVINCCARAVPIDDLSELFNEMLHRGFSPNTITFNVM 720

Query: 721 LDVYGKSKLFTKARNLFGLAQKRGLVDAISYNTMISVYGKNKDFQNMSSTVQKMKFNGFS 780
           LD YGK+KLF KAR LF +A+K+G++D ISYNTMI+ YG ++DF+NM+ST+Q M+F+GFS
Sbjct: 721 LDAYGKAKLFNKARELFMMARKQGMIDVISYNTMIAAYGHDRDFKNMASTIQNMQFDGFS 780

Query: 781 VSLEAYNCMLDAYGKECQMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEV 840
           VSLEAYNCMLDAYGK  QME+F++VLQRM+++S   DHYTYNIMIN+YGEQGWIDEVAEV
Sbjct: 781 VSLEAYNCMLDAYGKRGQMESFKNVLQRMKQSSCTSDHYTYNIMINVYGEQGWIDEVAEV 840

Query: 841 LTELKACGLEPDLYSYNTLIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQR 893
           L ELK  GL P+L SYNTLIKAYGIAGM+EEA  LVKEMR+  IEP++ITY N+I ALQ+
Sbjct: 841 LAELKESGLGPNLCSYNTLIKAYGIAGMIEEAIDLVKEMRKSGIEPNKITYTNLITALQK 900

[Close]

BLAST of CSPI01G17930 vs. TAIR10
Match: AT4G30825.1 (AT4G30825.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 1077.4 bits (2785), Expect = 0.0e+00
Identity = 548/902 (60.75%), Postives = 678/902 (75.17%), Query Frame = 1


Query: 1   MASLKLSFSLHSFDSNK--FDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPS 60
           M SL+ S  L  FDS +  F F  N     D   +  + + +H  ++S I S  RV    
Sbjct: 1   MGSLRFSIPLDPFDSKRKRFHFSANPSQFPDQFPIHFVTSSIHATRASSIGSSTRVLDKI 60

Query: 61  KVSQVEQEASDVSQSRFDEIVARK----KYFTAKKPSKRAAGSHFSFSRNCND----NIL 120
           +VS +  EA++ + +        +    K    ++ +K+     FSF R  ND    N+ 
Sbjct: 61  RVSSLGTEANENAINSASAAPVERSRSSKLSGDQRGTKKYVARKFSFRRGSNDLELENLF 120

Query: 121 FNGGELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLV 180
            N GE+DVNYS I    SLE CN ILKRLE C+D+  + FF+WMR NGKL  N  AY+L+
Sbjct: 121 VNNGEIDVNYSAIKPGQSLEHCNGILKRLESCSDTNAIKFFDWMRCNGKLVGNFVAYSLI 180

Query: 181 LRVLGRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQ 240
           LRVLGR+E+WD AE LI+E+      Q  +QVFNT+IYAC K   V+  +KWF MMLE  
Sbjct: 181 LRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFG 240

Query: 241 VQPNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEE 300
           V+PNVAT GMLMGLYQK  +++E+EFAF+ MR FGIVCE+AY+SMITIY R+ LYDKAEE
Sbjct: 241 VRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTRLRLYDKAEE 300

Query: 301 VIQLMQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYG 360
           VI LM++D+V   LENW+VMLNAY QQGKME AE +  SME AGFS NIIAYNTLITGYG
Sbjct: 301 VIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYG 360

Query: 361 KASNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSS 420
           K   M+ AQ LF  + N G+EPDET+YRSMIEGWGRA NY+ A+ YY+ELKR GY PNS 
Sbjct: 361 KIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSF 420

Query: 421 NLFTLINLQAKHEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSF 480
           NLFTLINLQAK+ D  GA+KT+ DM  IGC+ SSI+G +LQAYEK  ++  VP +L GSF
Sbjct: 421 NLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSF 480

Query: 481 YRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLE 540
           +  +  +QTS S LVMAYVKH +VDD L +LREK+W+D  FE +LYHLLICSCKE G L 
Sbjct: 481 HNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLT 540

Query: 541 NAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVV 600
           +A+KIY    + + + NLHIT TMIDIY++MG FS+ EKLYL+L+SSG+ LD I +++VV
Sbjct: 541 DAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVV 600

Query: 601 RMYVKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGV 660
           RMYVKAGSLE+ACSVL++M EQ+DIVPD+YL RDMLRIYQ+C +  KL  LYYRI KSG+
Sbjct: 601 RMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGI 660

Query: 661 SWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARN 720
            W+QEMYNCVINCC+RALP+DELS  F+EM++ GF PNTVT NV+LDVYGK+KLF K   
Sbjct: 661 HWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNE 720

Query: 721 LFGLAQKRGLVDAISYNTMISVYGKNKDFQNMSSTVQKMKFNGFSVSLEAYNCMLDAYGK 780
           LF LA++ G+VD ISYNT+I+ YGKNKD+ NMSS ++ M+F+GFSVSLEAYN +LDAYGK
Sbjct: 721 LFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGK 780

Query: 781 ECQMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYS 840
           + QME FRS+L+RM++++S  DHYTYNIMINIYGEQGWIDEVA+VL ELK  GL PDL S
Sbjct: 781 DKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCS 840

Query: 841 YNTLIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKWSLWMK 893
           YNTLIKAYGI GMVEEA  LVKEMR + I PD++TY N++ AL+RND+FLEA+KWSLWMK
Sbjct: 841 YNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMK 900

[Close]

BLAST of CSPI01G17930 vs. TAIR10
Match: AT3G06920.1 (AT3G06920.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 196.1 bits (497), Expect = 9.5e-50
Identity = 164/751 (21.84%), Postives = 334/751 (44.47%), Query Frame = 1


Query: 135 ILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDWDAAEKLIEEVR-AE 194
           +L+RL+  N  + + +F W     +L H   +YN +L V+ R  ++DA ++++ E+  A 
Sbjct: 71  VLRRLKDVN--RAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAG 130

Query: 195 LGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGMLMGLYQKKCDIKE 254
            G  ++  +   ++  C K+  + +G    +MM + + +P  + +  L+G +        
Sbjct: 131 FGPSVNTCI--EMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDM 190

Query: 255 SEFAFNQMRNFGIVCET-AYASMITIYIRMNLYDKAEEVIQLMQEDKVIPNLENWVVMLN 314
               F QM+  G       + ++I  + +    D A  ++  M+   +  ++  + V ++
Sbjct: 191 MLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCID 250

Query: 315 AYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQRLFLGIKNSGVEP 374
           ++ + GK++ A   F  +E  G   + + Y ++I    KA+ +D A  +F  ++ +   P
Sbjct: 251 SFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVP 310

Query: 375 DETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQAKHEDEAGALKTL 434
               Y +MI G+G AG +  A    +  + +G +P+      ++    K      ALK  
Sbjct: 311 CTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVF 370

Query: 435 NDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLSSQTSCSILVMAYVKHC 494
            +M K      S    ++    +A ++ +   L        +  +  + +I+V    K  
Sbjct: 371 EEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQ 430

Query: 495 LVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLPKRENKPNLHITC 554
            +D+A  +  E ++K    +E  +  LI    ++G +++A K+Y ++   + + N  +  
Sbjct: 431 KLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYT 490

Query: 555 TMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLEDACSVLDLMAEQ 614
           ++I  +   GR  DG K+Y  + +     DL   N  +    KAG  E   ++ + +  +
Sbjct: 491 SLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKAR 550

Query: 615 QDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCVINCCSRALPVDE 674
           +  VPD      ++    + G  ++  +L+Y + + G   D   YN VI+   +   V++
Sbjct: 551 R-FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNK 610

Query: 675 LSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQ-KRGLVDAISYNTMIS 734
             +L +EM   GF P  VT   ++D   K     +A  LF  A+ KR  ++ + Y+++I 
Sbjct: 611 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 670

Query: 735 VYGKNKDFQNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRMQETSSEC 794
            +GK          ++++   G + +L  +N +LDA  K  ++       Q M+E     
Sbjct: 671 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 730

Query: 795 DHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTLIKAYGIAGMVEEAAQLV 854
           +  TY I+IN   +    ++      E++  G++P   SY T+I     AG + EA  L 
Sbjct: 731 NQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALF 790

Query: 855 KEMREKRIEPDRITYINMIRALQRNDQFLEA 883
              +     PD   Y  MI  L   ++ ++A
Sbjct: 791 DRFKANGGVPDSACYNAMIEGLSNGNRAMDA 816

[Close]

BLAST of CSPI01G17930 vs. TAIR10
Match: AT4G31850.1 (AT4G31850.1 proton gradient regulation 3)

HSP 1 Score: 194.5 bits (493), Expect = 2.8e-49
Identity = 172/745 (23.09%), Postives = 339/745 (45.50%), Query Frame = 1


Query: 139  LEKCNDSKTLG----FFEWMRSNGKLKHNVSAYNLVLRVLGRQEDWDAAEKLIEEVRAEL 198
            L++ +D++ L     F+  M  +G +  +V  + +++  L +  ++  A   ++ +R + 
Sbjct: 335  LDRFSDNRDLDSVKQFWSEMEKDGHVP-DVVTFTILVDALCKAGNFGEAFDTLDVMRDQ- 394

Query: 199  GSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGMLMGLYQKKCDIKES 258
            G   +   +NTLI    +   ++   + F  M    V+P   T+ + +  Y K  D   +
Sbjct: 395  GILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSA 454

Query: 259  EFAFNQMRNFGIVCETAYASMITIYIRMNLYDK-AEEVIQLMQEDKVIPNLENWVVMLNA 318
               F +M+  GI       +     +     D+ A+++   +++  ++P+   + +M+  
Sbjct: 455  LETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKC 514

Query: 319  YCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQRLFLGIKNSGVEPD 378
            Y + G+++EA  + + M E G   ++I  N+LI    KA  +D A ++F+ +K   ++P 
Sbjct: 515  YSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPT 574

Query: 379  ETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQAKHEDEAGALKTLN 438
              TY +++ G G+ G  + A   ++ + ++G  PN+    TL +   K+++   ALK L 
Sbjct: 575  VVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLF 634

Query: 439  DMLKIGCRPSSIVGN-VLQAYEKARRMKSVPVLLTGSFYRKVLSSQTSCSILVMAYVKHC 498
             M+ +GC P     N ++    K  ++K   +       + V     +   L+   VK  
Sbjct: 635  KMMDMGCVPDVFTYNTIIFGLVKNGQVKEA-MCFFHQMKKLVYPDFVTLCTLLPGVVKAS 694

Query: 499  LVDDALKVLREKEWKDHHFEENLY-HLLICSCKELGHLENAIKIYTQLPKRENKPNLHIT 558
            L++DA K++    +       NL+   LI S      ++NA+    +L       +    
Sbjct: 695  LIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSI 754

Query: 559  CTMIDIYSIMGRFSDGEKLYLS--LRSSGIPLDLIAYNVVVRMYVKAGSLEDACSVLDLM 618
               I  YS       G +       +  G+   L  YN+++   ++A  +E A  V  L 
Sbjct: 755  LVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVF-LQ 814

Query: 619  AEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCVINCCSRALP 678
             +    +PD+     +L  Y + G + +L +LY  +       +   +N VI+   +A  
Sbjct: 815  VKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGN 874

Query: 679  VDE-LSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLF-GLAQKRGLVDAISYN 738
            VD+ L   +D M    F+P   T   ++D   KS    +A+ LF G+       +   YN
Sbjct: 875  VDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYN 934

Query: 739  TMISVYGKNKDFQNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRMQET 798
             +I+ +GK  +     +  ++M   G    L+ Y+ ++D      +++      + ++E+
Sbjct: 935  ILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES 994

Query: 799  SSECDHYTYNIMINIYGEQGWIDEVAEVLTELKAC-GLEPDLYSYNTLIKAYGIAGMVEE 858
                D   YN++IN  G+   ++E   +  E+K   G+ PDLY+YN+LI   GIAGMVEE
Sbjct: 995  GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE 1054

Query: 859  AAQLVKEMREKRIEPDRITYINMIR 872
            A ++  E++   +EP+  T+  +IR
Sbjct: 1055 AGKIYNEIQRAGLEPNVFTFNALIR 1075

[Close]

BLAST of CSPI01G17930 vs. TAIR10
Match: AT5G02860.1 (AT5G02860.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 191.4 bits (485), Expect = 2.4e-48
Identity = 139/589 (23.60%), Postives = 269/589 (45.67%), Query Frame = 1


Query: 304 LENWVV--MLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQRL 363
           L+N VV  +++   ++G++  A  +F  ++E GFS ++ +Y +LI+ +  +     A  +
Sbjct: 171 LDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNV 230

Query: 364 FLGIKNSGVEPDETTYRSMIEGWGRAGN-YKMAEWYYKELKRRGYMPNSSNLFTLINLQA 423
           F  ++  G +P   TY  ++  +G+ G  +       +++K  G  P++    TLI    
Sbjct: 231 FKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCK 290

Query: 424 KHEDEAGALKTLNDMLKIGCRPSSIVGN-VLQAYEKARRMKSVPVLLTGSFYRKVLSSQT 483
           +      A +   +M   G     +  N +L  Y K+ R K    +L          S  
Sbjct: 291 RGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIV 350

Query: 484 SCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQL 543
           + + L+ AY +  ++D+A+++  +   K    +   Y  L+   +  G +E+A+ I+ ++
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410

Query: 544 PKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSL 603
                KPN+      I +Y   G+F++  K++  +   G+  D++ +N ++ ++ + G  
Sbjct: 411 RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMD 470

Query: 604 EDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNC 663
            +   V   M ++   VP+      ++  Y RCG   +   +Y R+L +GV+ D   YN 
Sbjct: 471 SEVSGVFKEM-KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNT 530

Query: 664 VINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSK----LFTKARNLF-GL 723
           V+   +R    ++  ++  EM      PN +T   +L  Y   K    + + A  ++ G+
Sbjct: 531 VLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV 590

Query: 724 AQKRGLVDAISYNTMISVYGKNKDFQNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQM 783
            + R    A+   T++ V  K            ++K  GFS  +   N M+  YG+   +
Sbjct: 591 IEPR----AVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMV 650

Query: 784 ENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTL 843
                VL  M+E        TYN ++ ++       +  E+L E+ A G++PD+ SYNT+
Sbjct: 651 AKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTV 710

Query: 844 IKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAV 884
           I AY     + +A+++  EMR   I PD ITY   I +   +  F EA+
Sbjct: 711 IYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAI 754

[Close]

BLAST of CSPI01G17930 vs. TAIR10
Match: AT4G19440.1 (AT4G19440.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 169.5 bits (428), Expect = 9.6e-42
Identity = 137/577 (23.74%), Postives = 259/577 (44.89%), Query Frame = 1


Query: 275 MITIYIRMNLYDKAEEVIQLMQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEAG 334
           ++T  +R N + K  E   ++ +  V P++  +   +NA+C+ GK+EEA  +F+ MEEAG
Sbjct: 232 LLTSLVRANEFQKCCEAFDVVCKG-VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG 291

Query: 335 FSSNIIAYNTLITGYGKASNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAE 394
            + N++ +NT+I G G     D A      +   G+EP   TY  +++G  RA     A 
Sbjct: 292 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 351

Query: 395 WYYKELKRRGYMPNSSNLFTLIN--LQAKHEDEAGALKTLNDMLKIGCR-PSSIVGNVLQ 454
           +  KE+ ++G+ PN      LI+  ++A   ++A  +K L  M+  G    SS    +++
Sbjct: 352 FVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDL--MVSKGLSLTSSTYNTLIK 411

Query: 455 AYEKARRMKSVPVLLTGSFYRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHF 514
            Y K  +  +   LL          +Q S + ++     H + D AL+ + E   ++   
Sbjct: 412 GYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSP 471

Query: 515 EENLYHLLICSCKELGHLENAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLY 574
              L   LI    + G    A++++ Q   +    +   +  ++      G+  +  ++ 
Sbjct: 472 GGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQ 531

Query: 575 LSLRSSGIPLDLIAYNVVVRMYVKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQR 634
             +   G  +D ++YN ++        L++A   LD M  ++ + PD Y    ++     
Sbjct: 532 KEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV-KRGLKPDNYTYSILICGLFN 591

Query: 635 CGMVHKLADLYYRILKSGVSWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVT 694
              V +    +    ++G+  D   Y+ +I+ C +A   +E    FDEM+     PNTV 
Sbjct: 592 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 651

Query: 695 LNVMLDVYGKSKLFTKARNLFGLAQKRGL-VDAISYNTMISVYGKNKDFQNMSSTVQKMK 754
            N ++  Y +S   + A  L    + +G+  ++ +Y ++I         +      ++M+
Sbjct: 652 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 711

Query: 755 FNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWID 814
             G   ++  Y  ++D YGK  QM     +L+ M   +   +  TY +MI  Y   G + 
Sbjct: 712 MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVT 771

Query: 815 EVAEVLTELKACGLEPDLYSYNTLIKAYGIAGMVEEA 848
           E + +L E++  G+ PD  +Y   I  Y   G V EA
Sbjct: 772 EASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804

[Close]

BLAST of CSPI01G17930 vs. NCBI nr
Match: gi|449457967|ref|XP_004146719.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Cucumis sativus])

HSP 1 Score: 1786.9 bits (4627), Expect = 0.0e+00
Identity = 890/894 (99.55%), Postives = 893/894 (99.89%), Query Frame = 1


Query: 1   MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV 60
           MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV
Sbjct: 1   MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV 60

Query: 61  SQVEQEASDVSQSRFDEIVARKKYFTAKKPSKRAAGSHFSFSRNCNDNILFNGGELDVNY 120
           SQVEQ+ASDVSQSRFDEIVARKKYFT+KKPSKRAAGSHFSFSRNCNDNILFNGGELDVNY
Sbjct: 61  SQVEQDASDVSQSRFDEIVARKKYFTSKKPSKRAAGSHFSFSRNCNDNILFNGGELDVNY 120

Query: 121 STISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDW 180
           STISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDW
Sbjct: 121 STISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDW 180

Query: 181 DAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGM 240
           DAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGM
Sbjct: 181 DAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGM 240

Query: 241 LMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQEDKV 300
           LMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQEDKV
Sbjct: 241 LMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQEDKV 300

Query: 301 IPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQR 360
           IPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQR
Sbjct: 301 IPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQR 360

Query: 361 LFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQA 420
           LFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQA
Sbjct: 361 LFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQA 420

Query: 421 KHEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLSSQTS 480
           KHEDEAG LKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLSSQTS
Sbjct: 421 KHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLSSQTS 480

Query: 481 CSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLP 540
           CSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLP
Sbjct: 481 CSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLP 540

Query: 541 KRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLE 600
           KRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLE
Sbjct: 541 KRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLE 600

Query: 601 DACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCV 660
           DACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCV
Sbjct: 601 DACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCV 660

Query: 661 INCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGL 720
           INCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGL
Sbjct: 661 INCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGL 720

Query: 721 VDAISYNTMISVYGKNKDFQNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSV 780
           VDAISYNTMISVYGKNKDF+NMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSV
Sbjct: 721 VDAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSV 780

Query: 781 LQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTLIKAYGI 840
           LQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTLIKAYGI
Sbjct: 781 LQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTLIKAYGI 840

Query: 841 AGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKWSLWMKQMKY 895
           AGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKWSLWMKQMKY
Sbjct: 841 AGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKWSLWMKQMKY 894

[Close]

BLAST of CSPI01G17930 vs. NCBI nr
Match: gi|659086251|ref|XP_008443835.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Cucumis melo])

HSP 1 Score: 1716.8 bits (4445), Expect = 0.0e+00
Identity = 853/898 (94.99%), Postives = 878/898 (97.77%), Query Frame = 1


Query: 1   MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV 60
           MASLKLSFSLHSFDSNKFDFP+NSP LSDYCSLFSIN ++HLNKS I+YSLARVHKPSKV
Sbjct: 1   MASLKLSFSLHSFDSNKFDFPVNSPPLSDYCSLFSINGYIHLNKSCILYSLARVHKPSKV 60

Query: 61  SQVEQEASDVSQSRFDEIVARKKYFTAKKPSKRAAGSHFSFSRNCND----NILFNGGEL 120
           SQVE EASDVSQSRFD+I +RKKYFTAKKPSKRAAGSHFSFSRNC++    NILF+GGEL
Sbjct: 61  SQVEPEASDVSQSRFDDIDSRKKYFTAKKPSKRAAGSHFSFSRNCSEKIFENILFSGGEL 120

Query: 121 DVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGR 180
           DVNYSTISSDLSLE CNAILKRLEKCNDSKTL FFEWMRSNGKLKHNVSAYNLVLRVLGR
Sbjct: 121 DVNYSTISSDLSLEGCNAILKRLEKCNDSKTLDFFEWMRSNGKLKHNVSAYNLVLRVLGR 180

Query: 181 QEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVA 240
           QEDWDAAEKLI+EVRAELGSQLDFQVFNTLIYACYKS FVE GTKWFRMMLECQVQPNVA
Sbjct: 181 QEDWDAAEKLIKEVRAELGSQLDFQVFNTLIYACYKSGFVEWGTKWFRMMLECQVQPNVA 240

Query: 241 TFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQ 300
           TFGMLMGLYQK CDI+ESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQ
Sbjct: 241 TFGMLMGLYQKSCDIEESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQ 300

Query: 301 EDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMD 360
           +DKVIPNLENW+VMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMD
Sbjct: 301 KDKVIPNLENWLVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMD 360

Query: 361 TAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLI 420
           TAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKR+GYMPNSSNLFTLI
Sbjct: 361 TAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRKGYMPNSSNLFTLI 420

Query: 421 NLQAKHEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLS 480
           NLQAKHEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYEKARR+KSVPVLLTGSFYRKVLS
Sbjct: 421 NLQAKHEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYEKARRIKSVPVLLTGSFYRKVLS 480

Query: 481 SQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIY 540
           SQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGH E+AIKIY
Sbjct: 481 SQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHFESAIKIY 540

Query: 541 TQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKA 600
            Q PKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKA
Sbjct: 541 AQRPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKA 600

Query: 601 GSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEM 660
           GSLEDACSVLDLMAEQQDIVPD+YLLRDMLRIYQRCGMVHKL+DLYYRILKSGVSWDQEM
Sbjct: 601 GSLEDACSVLDLMAEQQDIVPDVYLLRDMLRIYQRCGMVHKLSDLYYRILKSGVSWDQEM 660

Query: 661 YNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQ 720
           YNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLF KARNLFG AQ
Sbjct: 661 YNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFAKARNLFGFAQ 720

Query: 721 KRGLVDAISYNTMISVYGKNKDFQNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMEN 780
           KRGLVDAISYNTMISVYGKNKDF+NMSSTVQ+MKFNGFSVSLEAYNCMLDAYGKECQMEN
Sbjct: 721 KRGLVDAISYNTMISVYGKNKDFKNMSSTVQQMKFNGFSVSLEAYNCMLDAYGKECQMEN 780

Query: 781 FRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTLIK 840
           FRSVLQRMQE++SECDHYTYNIMINIYGE+GWIDEVAEVLTELKACGLEPDLYSYNTLIK
Sbjct: 781 FRSVLQRMQESTSECDHYTYNIMINIYGERGWIDEVAEVLTELKACGLEPDLYSYNTLIK 840

Query: 841 AYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKWSLWMKQMKY 895
           AYGIAGMVEEAA+LVKEMREK IEPDRITYINMIRALQRNDQFLEA+KWSLWMKQMKY
Sbjct: 841 AYGIAGMVEEAARLVKEMREKGIEPDRITYINMIRALQRNDQFLEAIKWSLWMKQMKY 898

[Close]

BLAST of CSPI01G17930 vs. NCBI nr
Match: gi|645275895|ref|XP_008243032.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Prunus mume])

HSP 1 Score: 1219.9 bits (3155), Expect = 0.0e+00
Identity = 610/907 (67.25%), Postives = 733/907 (80.82%), Query Frame = 1


Query: 1   MASLKLSFSLHSFDSNK-FDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSK 60
           M SL+ S SL +FDS+K F+F   + L   + S  S+  +     S   + L+ + + ++
Sbjct: 1   MTSLRFSVSLETFDSSKKFNFSAVNSLCYSHVSRASV-VNSSNRVSGFKFELSSISELNQ 60

Query: 61  VSQVEQEASDVSQSRFDEIVARKKYFTAKKPSKRAAGSHFSFSRNCN------------- 120
           +S+    +   +++R DE +A +     +   K + G      R  +             
Sbjct: 61  MSEETTLSLSSNKNRVDESLAEQNLDFRQASVKGSRGPKNEVKREKDLKSSSRKSRWVRE 120

Query: 121 -DNILFNGGELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVS 180
            +N+  N GELDV+YS I SDLSLE CN ILKRLEKC+D KTL FFEWMRSNGKL+ NVS
Sbjct: 121 LENLFVNDGELDVDYSVIGSDLSLEHCNDILKRLEKCSDVKTLRFFEWMRSNGKLERNVS 180

Query: 181 AYNLVLRVLGRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRM 240
           A+NLVLRV+GR+EDWD AEKL++EV A+LG +L++QVFNTLIYAC K   +E G KWFRM
Sbjct: 181 AFNLVLRVMGRREDWDGAEKLVQEVIADLGCELNYQVFNTLIYACCKLGRLELGGKWFRM 240

Query: 241 MLECQVQPNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLY 300
           MLE  VQPN+ATFGMLM LYQK   ++E+EF F QMRNFGI+C++AY+SMITIY R+NL+
Sbjct: 241 MLEHGVQPNIATFGMLMVLYQKGWSVEEAEFTFFQMRNFGILCQSAYSSMITIYTRLNLF 300

Query: 301 DKAEEVIQLMQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTL 360
           +KAEE+I L++ED+V  NL+NW+VM+NAYCQQGK+++AELV  SM+EAGFS NIIAYNTL
Sbjct: 301 EKAEEIIGLLKEDRVRLNLDNWLVMINAYCQQGKVDDAELVLVSMQEAGFSPNIIAYNTL 360

Query: 361 ITGYGKASNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGY 420
           ITGYGKAS MD A  LF GIKN+G+EPDETTYRSMIEGWGRA NYK AEWYYKELKR GY
Sbjct: 361 ITGYGKASKMDAADHLFQGIKNAGLEPDETTYRSMIEGWGRADNYKEAEWYYKELKRLGY 420

Query: 421 MPNSSNLFTLINLQAKHEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVL 480
            PNSSNL+TLINLQAKHEDE GA++TL+DML +GC+ SSI+G +LQAYEKA R+  VP L
Sbjct: 421 KPNSSNLYTLINLQAKHEDEEGAIRTLDDMLTMGCQYSSILGTLLQAYEKAGRVDKVPRL 480

Query: 481 LTGSFYRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKE 540
           L GSFY+ +L SQTSCSILVMAYVKHCLVDD +KV+REK WKD  FE+NLYHLLICSCKE
Sbjct: 481 LRGSFYQHILVSQTSCSILVMAYVKHCLVDDTMKVVREKLWKDPPFEDNLYHLLICSCKE 540

Query: 541 LGHLENAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIA 600
           LGHLENA+KIY Q+P+ ++KPN+HI CTMIDIY IMG F++ EK+Y+ L+SSG+ LD+IA
Sbjct: 541 LGHLENAVKIYKQMPRYDDKPNMHIMCTMIDIYIIMGLFTEAEKIYVELKSSGVTLDMIA 600

Query: 601 YNVVVRMYVKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRI 660
           Y++ VRMYVKAG+L+DACSVLD M +Q+ IVPDIY+ RDMLRIYQRCG + KL DLYY++
Sbjct: 601 YSIAVRMYVKAGALKDACSVLDTMDKQEGIVPDIYMFRDMLRIYQRCGRLDKLKDLYYKL 660

Query: 661 LKSGVSWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLF 720
           LKSGV+WDQEMYNCVINCCSRALPVDE+S +FDEMLQ GF PNT+T NVMLDVYGK+KL 
Sbjct: 661 LKSGVTWDQEMYNCVINCCSRALPVDEISEIFDEMLQRGFVPNTITFNVMLDVYGKAKLL 720

Query: 721 TKARNLFGLAQKRGLVDAISYNTMISVYGKNKDFQNMSSTVQKMKFNGFSVSLEAYNCML 780
            KAR LF +AQK GLVD ISYNT+I+ YG+NKD +NMSST  +M+F GFSVSLEAYN ML
Sbjct: 721 KKARKLFWMAQKWGLVDMISYNTIIAAYGRNKDLRNMSSTFGEMQFKGFSVSLEAYNTML 780

Query: 781 DAYGKECQMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLE 840
           DAYGKE QME FRSVLQRM+ETS   DHYTYNIMINIYGEQGWIDEVA+VLTELK CGL 
Sbjct: 781 DAYGKESQMEIFRSVLQRMKETSCASDHYTYNIMINIYGEQGWIDEVADVLTELKECGLG 840

Query: 841 PDLYSYNTLIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKW 893
           PDL SYNTLIKAYGIAGMVE+A  LVKEMRE  I+PD+ITYIN+I AL++ND++LEAVKW
Sbjct: 841 PDLCSYNTLIKAYGIAGMVEDAVHLVKEMRENGIQPDKITYINLINALRKNDEYLEAVKW 900

[Close]

BLAST of CSPI01G17930 vs. NCBI nr
Match: gi|694354337|ref|XP_009358409.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Pyrus x bretschneideri])

HSP 1 Score: 1212.6 bits (3136), Expect = 0.0e+00
Identity = 610/900 (67.78%), Postives = 728/900 (80.89%), Query Frame = 1


Query: 1   MASLKLSFSLHSFDS-NKFD--FPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKP 60
           M SL+ S SL +FDS NK +  F  +   +S  C + ++N    +  S + + L+   + 
Sbjct: 2   MTSLRFSISLETFDSSNKLNSSFCYSHVNVSRACVVNALNWGNRIKVSGLPFELSGTSEL 61

Query: 61  SKVSQVEQEASDVSQSRFDEIVARKKYFTAKKPSKRAAGSHFSFSRNCN-----DNILFN 120
           +++ + E   S V  +      + K     KK S+R  G   S SR        +N+  N
Sbjct: 62  NQMGE-ETNLSLVEGNPEFRHESEKGSGGPKKESRREKGLKLS-SRKSRWVRELENLYVN 121

Query: 121 GGELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLR 180
           GGE DV+YS ISS LSLE CN IL+RLE+C+D K L FFEWMRSNGKL+ NVSA+N VLR
Sbjct: 122 GGEFDVDYSVISSHLSLEHCNDILRRLERCSDVKALRFFEWMRSNGKLERNVSAFNSVLR 181

Query: 181 VLGRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQ 240
           V+GR+EDWDAAEKL++E+ A LG +L++QVFNTLIYAC K    E G KWFRMML+ ++Q
Sbjct: 182 VMGRREDWDAAEKLVQELLAGLGGELNYQVFNTLIYACCKLGRAELGAKWFRMMLDHRIQ 241

Query: 241 PNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVI 300
           PN+ATFGMLMGLYQK  +++E+EF F+QMRN GIVC++AY++MITIY R+NLYDKAEEVI
Sbjct: 242 PNIATFGMLMGLYQKGWNVEEAEFTFSQMRNCGIVCQSAYSAMITIYTRINLYDKAEEVI 301

Query: 301 QLMQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKA 360
            LM+ED+V  NL+NW+VM+NAYCQQGK+++AE+V  SM+EAGFS NIIAYNTLITGYGKA
Sbjct: 302 GLMREDRVRLNLDNWLVMINAYCQQGKVDDAEVVLVSMQEAGFSPNIIAYNTLITGYGKA 361

Query: 361 SNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNL 420
           S MD A  LFLGIKN+G+EPDETTYRSMIEGWGRA  YK A+WYYKELKR GY PNSSNL
Sbjct: 362 SKMDAAHHLFLGIKNAGLEPDETTYRSMIEGWGRADKYKEAKWYYKELKRLGYKPNSSNL 421

Query: 421 FTLINLQAKHEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYR 480
           +TLINLQAKHEDE GA++TL+DML +GC+ SSI+G +LQAYEK  R+  VP LL GSFY+
Sbjct: 422 YTLINLQAKHEDEEGAIRTLDDMLTMGCQYSSILGTLLQAYEKVGRVDKVPRLLRGSFYQ 481

Query: 481 KVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENA 540
            +L SQTSCSILVMAYVKHCLVDD +KVLREK WKD  FE+NLYHLLICSCKELG LE+A
Sbjct: 482 HILVSQTSCSILVMAYVKHCLVDDTMKVLREKLWKDPPFEDNLYHLLICSCKELGRLEDA 541

Query: 541 IKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRM 600
           +KIY Q+P+  NKPN+HI CTMIDIYSIM  F++ EK Y+ L+SSG  LDLIAY++ VRM
Sbjct: 542 VKIYKQMPRHFNKPNMHIMCTMIDIYSIMSLFTEAEKTYVELKSSGNVLDLIAYSIAVRM 601

Query: 601 YVKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSW 660
           YVKAGSLEDACSVL+ M EQ+ IVPDIY+ RDMLRIYQRCG + KL DLYY++LKSGV+W
Sbjct: 602 YVKAGSLEDACSVLEAMEEQEGIVPDIYMFRDMLRIYQRCGRLDKLKDLYYKLLKSGVTW 661

Query: 661 DQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLF 720
           D+EMYNCVINCCS ALPVDE+S +FDEMLQCGF PNT+T NVMLDVYGK++L  KAR LF
Sbjct: 662 DREMYNCVINCCSHALPVDEISEIFDEMLQCGFVPNTITFNVMLDVYGKARLLKKARELF 721

Query: 721 GLAQKRGLVDAISYNTMISVYGKNKDFQNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKEC 780
            +AQK GLVD ISYNT+I+ YG+NKDF++MSST Q+M+F GFSVSLEAYN MLDAYGKE 
Sbjct: 722 RMAQKWGLVDMISYNTIIAAYGRNKDFRSMSSTFQEMQFKGFSVSLEAYNSMLDAYGKES 781

Query: 781 QMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYN 840
           QME FRS+LQRM++TS   DHYTYNIMINIYGEQGWIDEVA VLTELK CGL PDL SYN
Sbjct: 782 QMERFRSILQRMKKTSCASDHYTYNIMINIYGEQGWIDEVAGVLTELKECGLGPDLCSYN 841

Query: 841 TLIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKWSLWMKQM 893
           TLIKAYGIAGMVE+A  LVKEMRE  +EPD+ITY+N+I ALQRND++LEAVKWSLWMKQM
Sbjct: 842 TLIKAYGIAGMVEDAVHLVKEMRENGVEPDKITYVNLIAALQRNDEYLEAVKWSLWMKQM 899

[Close]

BLAST of CSPI01G17930 vs. NCBI nr
Match: gi|658003538|ref|XP_008394283.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Malus domestica])

HSP 1 Score: 1212.6 bits (3136), Expect = 0.0e+00
Identity = 611/900 (67.89%), Postives = 724/900 (80.44%), Query Frame = 1


Query: 1   MASLKLSFSLHSFDS-NKFDFPL--NSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKP 60
           M SL+ S SL +FDS NKF+         +S  C + ++N    +  S   + L+   + 
Sbjct: 2   MTSLRFSISLDTFDSSNKFNSSXCYGHAXVSRACVVNALNWGNRIKVSGFPFELSGTSEL 61

Query: 61  SKVSQVEQEASDVSQSRFDEIVARKKYFTAKKPSKRAAGSHFSFSRNCN-----DNILFN 120
           S++ + E   S V  +      + K     KK  +R   S  S SR        +N+  N
Sbjct: 62  SQMGE-EXNLSLVEGNPDFRHESEKGSGGPKKEXRREKXSKLS-SRKSRWVRELENLFVN 121

Query: 121 GGELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLR 180
           GGE DV+YS ISS LS+E CN IL+RLE+CND K L FFEWMRSNGKL+ NVSA+N VLR
Sbjct: 122 GGEFDVDYSVISSHLSMEHCNDILRRLERCNDVKALRFFEWMRSNGKLERNVSAFNSVLR 181

Query: 181 VLGRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQ 240
           V GR+EDWDAAEKL++E+ A LG +L++QVFNTLIYAC K    E G KWFRMML+ ++Q
Sbjct: 182 VXGRREDWDAAEKLVQELLAGLGGELNYQVFNTLIYACCKLGRAELGAKWFRMMLDHRIQ 241

Query: 241 PNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVI 300
           PN+ATFGMLMGLYQK  +++E+EF F+QMRN GIVC++AY++MITIY R+NLYDKAEEVI
Sbjct: 242 PNIATFGMLMGLYQKGWNVEEAEFTFSQMRNCGIVCQSAYSAMITIYTRLNLYDKAEEVI 301

Query: 301 QLMQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKA 360
            LM+ED+V  NL+NW+VM+NAYCQQGK+++AE+V  SM+EAGFS NIIAYNTLITGYGKA
Sbjct: 302 GLMREDRVRLNLDNWLVMINAYCQQGKVDDAEVVLVSMQEAGFSPNIIAYNTLITGYGKA 361

Query: 361 SNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNL 420
           S MD A  LFLGIKN+G+EPDETTYRSMIEGWGRA  YK AEWYYKELKR GY PNSSNL
Sbjct: 362 SKMDAAHHLFLGIKNAGLEPDETTYRSMIEGWGRADKYKEAEWYYKELKRLGYKPNSSNL 421

Query: 421 FTLINLQAKHEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYR 480
           +TL+NLQAKHEDE GA++TL+DML +GC+ SSI+G +LQAYEK  R+  VP LL GSFY+
Sbjct: 422 YTLVNLQAKHEDEEGAIRTLDDMLTMGCQYSSILGTLLQAYEKVGRVDKVPRLLRGSFYQ 481

Query: 481 KVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENA 540
            +L SQTSCSILVMAYVKHCLVDD +KVLREK WKD  FE+NLYHLLICSCKELG LE+A
Sbjct: 482 HILVSQTSCSILVMAYVKHCLVDDTMKVLREKLWKDPPFEDNLYHLLICSCKELGRLEDA 541

Query: 541 IKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRM 600
           +KIY Q+ +  NKPN+HI CTMIDIYSIMG F++ EK Y+ L+SSGI LDLIAY++ VRM
Sbjct: 542 VKIYKQMXRHFNKPNMHIMCTMIDIYSIMGLFTEAEKTYVELKSSGIVLDLIAYSIAVRM 601

Query: 601 YVKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSW 660
           YVKAGSLEDACSVL+ M EQ+ IVPDIY+ RDMLRIYQRCG + KL DLYY++LKSGV+W
Sbjct: 602 YVKAGSLEDACSVLEAMEEQEGIVPDIYMFRDMLRIYQRCGRLDKLKDLYYKLLKSGVTW 661

Query: 661 DQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLF 720
           D+EMYNCVINCCS ALPVDE+S +FDEMLQCGF PNT+T NVMLDVYGK++L  KAR LF
Sbjct: 662 DREMYNCVINCCSHALPVDEISEIFDEMLQCGFVPNTITFNVMLDVYGKARLLKKARELF 721

Query: 721 GLAQKRGLVDAISYNTMISVYGKNKDFQNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKEC 780
            +AQK GLVD ISYNT+I+ YG+NKDF++MSST Q+M+F GFSVSLEAYN MLDAYGKE 
Sbjct: 722 RMAQKWGLVDMISYNTIIAAYGRNKDFRSMSSTFQEMQFKGFSVSLEAYNSMLDAYGKES 781

Query: 781 QMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYN 840
           QME FRSVLQRM++TS   DHYTYNIMIN+YGEQGWIDEVA VLTELK C L PDL SYN
Sbjct: 782 QMERFRSVLQRMKKTSXASDHYTYNIMINVYGEQGWIDEVAGVLTELKECXLGPDLCSYN 841

Query: 841 TLIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKWSLWMKQM 893
           TLIKAYGIAGMVE+A  LVKEMRE  IEPD+ITY+N+I ALQRND++LEAVKWSLWMKQM
Sbjct: 842 TLIKAYGIAGMVEDAVHLVKEMRENGIEPDKITYVNLIAALQRNDEYLEAVKWSLWMKQM 899

The following BLAST results are available for this feature:

BLAST of CSPI01G17930 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PP342_ARATH	0.0e+00	60.75	Pentatricopeptide repeat-containing protein At4g30825, chloroplastic OS=Arabidop...	[more]
PP217_ARATH	1.7e-48	21.84	Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana GN...	[more]
PP344_ARATH	4.9e-48	23.09	Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidop...	[more]
PP362_ARATH	4.2e-47	23.60	Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN...	[more]
PP325_ARATH	1.7e-40	23.74	Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidop...	[more]

BLAST of CSPI01G17930 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTR9_CUCSA	0.0e+00	99.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G257890 PE=4 SV=1	[more]
B9SQY5_RICCO	0.0e+00	65.47	Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO...	[more]
M5VU43_PRUPE	0.0e+00	74.87	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019391mg PE=4 S...	[more]
V4UR41_9ROSI	0.0e+00	69.80	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007430mg PE=4 SV=1	[more]
A0A067L3T5_JATCU	0.0e+00	64.01	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04067 PE=4 SV=1	[more]

BLAST of CSPI01G17930 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G30825.1	0.0e+00	60.75	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G06920.1	9.5e-50	21.84	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G31850.1	2.8e-49	23.09	proton gradient regulation 3	[more]
AT5G02860.1	2.4e-48	23.60	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G19440.1	9.6e-42	23.74	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of CSPI01G17930 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449457967\|ref\|XP_004146719.1\|	0.0e+00	99.55	PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic ...	[more]
gi\|659086251\|ref\|XP_008443835.1\|	0.0e+00	94.99	PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic ...	[more]
gi\|645275895\|ref\|XP_008243032.1\|	0.0e+00	67.25	PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic ...	[more]
gi\|694354337\|ref\|XP_009358409.1\|	0.0e+00	67.78	PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic ...	[more]
gi\|658003538\|ref\|XP_008394283.1\|	0.0e+00	67.89	PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat
IPR004575	MAT1/Tfb3
IPR011990	TPR-like_helical_dom_sf

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0007049	cell cycle

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007049	cell cycle
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G17930.1	CSPI01G17930.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 585..611 score: 0.0015coord: 480..503 score: 0.19coord: 724..754 score: 3.0E-4coord: 553..579 score:
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 338..383 score: 3.3E-11coord: 656..699 score: 5.7E-8coord: 760..801 score: 2.3E-8coord: 826..873 score: 1.4
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 760..792 score: 4.1E-5coord: 585..619 score: 3.2E-7coord: 724..757 score: 1.2E-5coord: 271..303 score: 3.3E-5coord: 794..827 score: 4.1E-7coord: 202..235 score: 0.0013coord: 341..374 score: 1.6E-5coord: 690..721 score: 0.0014coord: 376..408 score: 8.3E-4coord: 656..689 score: 2.4E-6coord: 307..338 score: 4.8E-7coord: 829..862 score: 6.3
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 827..861 score: 13.197coord: 547..581 score: 7.87coord: 688..718 score: 7.541coord: 653..687 score: 10.819coord: 477..511 score: 6.39coord: 792..826 score: 11.575coord: 338..372 score: 11.378coord: 408..442 score: 7.3coord: 722..756 score: 9.701coord: 618..652 score: 6.96coord: 303..337 score: 11.389coord: 373..407 score: 11.772coord: 163..193 score: 8.396coord: 199..233 score: 9.262coord: 582..612 score: 9.339coord: 234..264 score: 6.369coord: 268..302 score: 9.24coord: 862..894 score: 7.333coord: 757..791 score: 8.177coord: 512..546 score: 7
IPR004575	Cdk-activating kinase assembly factor MAT1/Tfb3	PANTHER	PTHR12683	FAMILY NOT NAMED	coord: 83..894 score:
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 689..885 score: 6.8E-5coord: 171..285 score: 8.4E-10coord: 376..409 score: 8.4E-10coord: 513..646 score: 8.4
None	No IPR available	unknown	Coil	Coil	coord: 840..860 scor
None	No IPR available	PANTHER	PTHR12683:SF10	SUBFAMILY NOT NAMED	coord: 83..894 score:
None	No IPR available	unknown	SSF81901	HCP-like	coord: 162..343 score: 3.4E-6coord: 312..440 score: 5.23E-6coord: 509..575 score: 5.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G17930	Cla018752	Watermelon (97103) v1	cpiwmB086
CSPI01G17930	Csa1G257890	Cucumber (Chinese Long) v2	cpicuB004
CSPI01G17930	MELO3C010202	Melon (DHL92) v3.5.1	cpimeB057
CSPI01G17930	Lsi06G010780	Bottle gourd (USVL1VR-Ls)	cpilsiB064
CSPI01G17930	MELO3C010202.2	Melon (DHL92) v3.6.1	cpimedB051
CSPI01G17930	CsaV3_1G029170	Cucumber (Chinese Long) v3	cpicucB000
CSPI01G17930	Cla97C05G097150	Watermelon (97103) v2	cpiwmbB067
CSPI01G17930	Cla97C06G121830	Watermelon (97103) v2	cpiwmbB068
CSPI01G17930	Bhi02G000662	Wax gourd	cpiwgoB099
CSPI01G17930	Cucsa.170710	Cucumber (Gy14) v1	cgycpiB268
CSPI01G17930	CmaCh10G004500	Cucurbita maxima (Rimu)	cmacpiB059
CSPI01G17930	CmoCh10G004830	Cucurbita moschata (Rifu)	cmocpiB051
CSPI01G17930	Cp4.1LG18g05820	Cucurbita pepo (Zucchini)	cpecpiB351
CSPI01G17930	CsGy1G018020	Cucumber (Gy14) v2	cgybcpiB002
CSPI01G17930	Carg10013	Silver-seed gourd	carcpiB0138

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G17930	Cucumber (Gy14) v2	cgybcpiB050
CSPI01G17930	Silver-seed gourd	carcpiB0539
CSPI01G17930	Silver-seed gourd	carcpiB0951
CSPI01G17930	Cucumber (Chinese Long) v3	cpicucB020
CSPI01G17930	Wax gourd	cpiwgoB006
CSPI01G17930	Wild cucumber (PI 183967)	cpicpiB006
CSPI01G17930	Cucumber (Gy14) v1	cgycpiB096
CSPI01G17930	Cucurbita maxima (Rimu)	cmacpiB097
CSPI01G17930	Cucurbita maxima (Rimu)	cmacpiB164
CSPI01G17930	Cucurbita moschata (Rifu)	cmocpiB090
CSPI01G17930	Cucurbita moschata (Rifu)	cmocpiB149
CSPI01G17930	Cucumber (Chinese Long) v2	cpicuB014
CSPI01G17930	Melon (DHL92) v3.5.1	cpimeB075
CSPI01G17930	Watermelon (Charleston Gray)	cpiwcgB071
CSPI01G17930	Cucurbita pepo (Zucchini)	cpecpiB640
CSPI01G17930	Bottle gourd (USVL1VR-Ls)	cpilsiB010
CSPI01G17930	Melon (DHL92) v3.6.1	cpimedB067