Csa1G257890 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G257890
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Pentatricopeptide repeat-containing protein, putative; contains IPR002885 (Pentatricopeptide repeat), IPR004575 (Cdk-activating kinase assembly factor MAT1/Tfb3), IPR011990 (Tetratricopeptide-like helical)
Location	Chr1 : 12647630 .. 12650314 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCCTCAAACTTTCCTTCTCTTTACATTCTTTTGATTCCAATAAGTTCGATTTTCCTCTCAATTCACCTCTGCTCTCTGATTATTGCTCTCTTTTCTCCATCAATGCTCATCTTCATCTCAATAAGTCCTCCATAATTTACTCTCTGGCTAGGGTTCACAAGCCCTCTAAAGTTTCTCAGGTAGAACAGGACGCGTCCGACGTTTCCCAATCCAGATTTGATGAAATTGTCGCCAGGAAAAAGTATTTTACCTCTAAGAAGCCTTCAAAGAGAGCAGCAGGTTCGCATTTTAGTTTCAGTAGGAATTGTAATGACAATATTCTTTTTAATGGTGGTGAATTGGATGTCAATTACTCAACTATATCCTCTGATTTGAGCTTAGAGGATTGCAATGCTATTTTGAAAAGGCTAGAGAAGTGTAACGATTCCAAAACACTGGGTTTCTTTGAGTGGATGAGAAGTAATGGGAAATTAAAACACAATGTGAGTGCTTATAATTTGGTTCTTCGAGTGTTGGGTAGGCAAGAAGATTGGGATGCTGCCGAGAAGCTAATTGAGGAAGTTAGAGCTGAGTTGGGTTCTCAATTGGATTTTCAGGTTTTTAACACTCTTATCTATGCTTGTTATAAATCGAGGTTTGTGGAGCAGGGTACGAAATGGTTTCGAATGATGTTGGAATGCCAAGTGCAGCCCAATGTCGCAACATTTGGAATGCTTATGGGTCTCTATCAGAAGAAGTGTGATATTAAGGAATCGGAGTTTGCCTTTAATCAGATGAGAAACTTTGGTATTGTTTGTGAAACAGCATATGCATCTATGATTACTATATACATACGTATGAATTTATACGATAAAGCAGAAGAGGTGATTCAATTAATGCAAGAAGATAAAGTGATTCCTAATCTAGAGAACTGGGTAGTAATGCTTAATGCTTATTGTCAGCAAGGCAAAATGGAGGAAGCTGAACTTGTATTTGCCTCAATGGAAGAAGCTGGGTTTTCATCCAATATCATTGCATATAATACCTTGATTACTGGGTATGGGAAGGCATCAAATATGGATACTGCTCAACGCCTGTTCTTGGGCATCAAGAACTCTGGAGTAGAACCTGATGAAACGACTTACCGCTCCATGATTGAAGGTTGGGGTCGAGCTGGTAATTATAAAATGGCAGAATGGTATTATAAGGAGCTCAAACGGAGAGGATATATGCCGAATTCCTCTAACTTGTTCACCCTCATAAATCTACAAGCCAAACATGAGGATGAAGCAGGTACACTTAAAACTCTAAATGATATGCTAAAGATTGGATGCCGGCCTTCTTCCATTGTTGGAAATGTTTTGCAAGCATATGAAAAGGCTAGAAGAATGAAAAGTGTGCCTGTCCTCTTGACAGGGTCGTTCTATCGGAAAGTTCTGAGCAGCCAGACATCTTGCTCAATTCTGGTAATGGCTTATGTGAAGCACTGTTTAGTGGATGACGCTTTAAAAGTGTTGAGGGAAAAGGAGTGGAAAGATCATCATTTTGAGGAGAATTTGTATCATTTGCTAATTTGTTCATGTAAAGAGTTGGGCCATCTCGAGAATGCAATTAAGATATACACACAACTGCCTAAACGTGAAAACAAACCGAACTTGCATATCACATGCACAATGATTGATATCTACAGCATCATGGGTAGGTTCTCTGACGGGGAGAAGCTTTATCTAAGCCTGAGATCATCAGGCATTCCTTTGGATTTGATTGCTTATAATGTTGTTGTGAGAATGTATGTTAAAGCTGGATCATTGGAAGATGCATGCTCAGTTCTTGACTTGATGGCTGAGCAGCAGGACATTGTTCCGGACATATATCTGTTACGGGACATGCTTCGTATTTACCAACGATGTGGCATGGTGCATAAGCTAGCAGATCTGTACTATAGGATATTGAAGAGTGGAGTGTCTTGGGATCAGGAAATGTATAATTGTGTCATAAATTGCTGTTCCCGTGCTCTGCCTGTTGATGAGCTTTCTAGGCTTTTTGATGAAATGCTTCAATGTGGTTTTGCCCCAAATACAGTGACCTTGAATGTCATGCTTGACGTTTATGGGAAATCCAAGCTTTTCACTAAGGCTAGAAATCTCTTTGGGCTTGCTCAGAAAAGAGGTTTGGTTGATGCAATCTCTTATAATACTATGATATCTGTCTATGGGAAGAATAAGGACTTCAAAAACATGTCATCTACGGTTCAGAAAATGAAATTTAACGGGTTTTCAGTTTCCCTTGAAGCCTACAATTGTATGTTGGATGCTTATGGCAAAGAATGCCAAATGGAGAATTTCAGAAGTGTCTTGCAGCGAATGCAGGAGACAAGTTCTGAATGTGACCATTATACGTACAACATCATGATCAACATCTATGGAGAACAAGGATGGATAGATGAAGTTGCGGAAGTTCTGACAGAATTGAAAGCATGTGGACTTGAACCCGATCTGTACAGCTACAACACATTGATCAAGGCATATGGAATAGCAGGGATGGTTGAAGAAGCTGCTCAGTTGGTGAAAGAAATGAGAGAAAAGAGGATAGAACCAGATAGGATAACTTATATTAACATGATTAGAGCACTGCAAAGAAACGATCAATTTTTAGAGGCAGTCAAGTGGTCATTGTGGATGAAGCAGATGAAATATTGA

mRNA sequence

ATGGCTTCCCTCAAACTTTCCTTCTCTTTACATTCTTTTGATTCCAATAAGTTCGATTTTCCTCTCAATTCACCTCTGCTCTCTGATTATTGCTCTCTTTTCTCCATCAATGCTCATCTTCATCTCAATAAGTCCTCCATAATTTACTCTCTGGCTAGGGTTCACAAGCCCTCTAAAGTTTCTCAGGTAGAACAGGACGCGTCCGACGTTTCCCAATCCAGATTTGATGAAATTGTCGCCAGGAAAAAGTATTTTACCTCTAAGAAGCCTTCAAAGAGAGCAGCAGGTTCGCATTTTAGTTTCAGTAGGAATTGTAATGACAATATTCTTTTTAATGGTGGTGAATTGGATGTCAATTACTCAACTATATCCTCTGATTTGAGCTTAGAGGATTGCAATGCTATTTTGAAAAGGCTAGAGAAGTGTAACGATTCCAAAACACTGGGTTTCTTTGAGTGGATGAGAAGTAATGGGAAATTAAAACACAATGTGAGTGCTTATAATTTGGTTCTTCGAGTGTTGGGTAGGCAAGAAGATTGGGATGCTGCCGAGAAGCTAATTGAGGAAGTTAGAGCTGAGTTGGGTTCTCAATTGGATTTTCAGGTTTTTAACACTCTTATCTATGCTTGTTATAAATCGAGGTTTGTGGAGCAGGGTACGAAATGGTTTCGAATGATGTTGGAATGCCAAGTGCAGCCCAATGTCGCAACATTTGGAATGCTTATGGGTCTCTATCAGAAGAAGTGTGATATTAAGGAATCGGAGTTTGCCTTTAATCAGATGAGAAACTTTGGTATTGTTTGTGAAACAGCATATGCATCTATGATTACTATATACATACGTATGAATTTATACGATAAAGCAGAAGAGGTGATTCAATTAATGCAAGAAGATAAAGTGATTCCTAATCTAGAGAACTGGGTAGTAATGCTTAATGCTTATTGTCAGCAAGGCAAAATGGAGGAAGCTGAACTTGTATTTGCCTCAATGGAAGAAGCTGGGTTTTCATCCAATATCATTGCATATAATACCTTGATTACTGGGTATGGGAAGGCATCAAATATGGATACTGCTCAACGCCTGTTCTTGGGCATCAAGAACTCTGGAGTAGAACCTGATGAAACGACTTACCGCTCCATGATTGAAGGTTGGGGTCGAGCTGGTAATTATAAAATGGCAGAATGGTATTATAAGGAGCTCAAACGGAGAGGATATATGCCGAATTCCTCTAACTTGTTCACCCTCATAAATCTACAAGCCAAACATGAGGATGAAGCAGGTACACTTAAAACTCTAAATGATATGCTAAAGATTGGATGCCGGCCTTCTTCCATTGTTGGAAATGTTTTGCAAGCATATGAAAAGGCTAGAAGAATGAAAAGTGTGCCTGTCCTCTTGACAGGGTCGTTCTATCGGAAAGTTCTGAGCAGCCAGACATCTTGCTCAATTCTGGTAATGGCTTATGTGAAGCACTGTTTAGTGGATGACGCTTTAAAAGTGTTGAGGGAAAAGGAGTGGAAAGATCATCATTTTGAGGAGAATTTGTATCATTTGCTAATTTGTTCATGTAAAGAGTTGGGCCATCTCGAGAATGCAATTAAGATATACACACAACTGCCTAAACGTGAAAACAAACCGAACTTGCATATCACATGCACAATGATTGATATCTACAGCATCATGGGTAGGTTCTCTGACGGGGAGAAGCTTTATCTAAGCCTGAGATCATCAGGCATTCCTTTGGATTTGATTGCTTATAATGTTGTTGTGAGAATGTATGTTAAAGCTGGATCATTGGAAGATGCATGCTCAGTTCTTGACTTGATGGCTGAGCAGCAGGACATTGTTCCGGACATATATCTGTTACGGGACATGCTTCGTATTTACCAACGATGTGGCATGGTGCATAAGCTAGCAGATCTGTACTATAGGATATTGAAGAGTGGAGTGTCTTGGGATCAGGAAATGTATAATTGTGTCATAAATTGCTGTTCCCGTGCTCTGCCTGTTGATGAGCTTTCTAGGCTTTTTGATGAAATGCTTCAATGTGGTTTTGCCCCAAATACAGTGACCTTGAATGTCATGCTTGACGTTTATGGGAAATCCAAGCTTTTCACTAAGGCTAGAAATCTCTTTGGGCTTGCTCAGAAAAGAGGTTTGGTTGATGCAATCTCTTATAATACTATGATATCTGTCTATGGGAAGAATAAGGACTTCAAAAACATGTCATCTACGGTTCAGAAAATGAAATTTAACGGGTTTTCAGTTTCCCTTGAAGCCTACAATTGTATGTTGGATGCTTATGGCAAAGAATGCCAAATGGAGAATTTCAGAAGTGTCTTGCAGCGAATGCAGGAGACAAGTTCTGAATGTGACCATTATACGTACAACATCATGATCAACATCTATGGAGAACAAGGATGGATAGATGAAGTTGCGGAAGTTCTGACAGAATTGAAAGCATGTGGACTTGAACCCGATCTGTACAGCTACAACACATTGATCAAGGCATATGGAATAGCAGGGATGGTTGAAGAAGCTGCTCAGTTGGTGAAAGAAATGAGAGAAAAGAGGATAGAACCAGATAGGATAACTTATATTAACATGATTAGAGCACTGCAAAGAAACGATCAATTTTTAGAGGCAGTCAAGTGGTCATTGTGGATGAAGCAGATGAAATATTGA

Coding sequence (CDS)

ATGGCTTCCCTCAAACTTTCCTTCTCTTTACATTCTTTTGATTCCAATAAGTTCGATTTTCCTCTCAATTCACCTCTGCTCTCTGATTATTGCTCTCTTTTCTCCATCAATGCTCATCTTCATCTCAATAAGTCCTCCATAATTTACTCTCTGGCTAGGGTTCACAAGCCCTCTAAAGTTTCTCAGGTAGAACAGGACGCGTCCGACGTTTCCCAATCCAGATTTGATGAAATTGTCGCCAGGAAAAAGTATTTTACCTCTAAGAAGCCTTCAAAGAGAGCAGCAGGTTCGCATTTTAGTTTCAGTAGGAATTGTAATGACAATATTCTTTTTAATGGTGGTGAATTGGATGTCAATTACTCAACTATATCCTCTGATTTGAGCTTAGAGGATTGCAATGCTATTTTGAAAAGGCTAGAGAAGTGTAACGATTCCAAAACACTGGGTTTCTTTGAGTGGATGAGAAGTAATGGGAAATTAAAACACAATGTGAGTGCTTATAATTTGGTTCTTCGAGTGTTGGGTAGGCAAGAAGATTGGGATGCTGCCGAGAAGCTAATTGAGGAAGTTAGAGCTGAGTTGGGTTCTCAATTGGATTTTCAGGTTTTTAACACTCTTATCTATGCTTGTTATAAATCGAGGTTTGTGGAGCAGGGTACGAAATGGTTTCGAATGATGTTGGAATGCCAAGTGCAGCCCAATGTCGCAACATTTGGAATGCTTATGGGTCTCTATCAGAAGAAGTGTGATATTAAGGAATCGGAGTTTGCCTTTAATCAGATGAGAAACTTTGGTATTGTTTGTGAAACAGCATATGCATCTATGATTACTATATACATACGTATGAATTTATACGATAAAGCAGAAGAGGTGATTCAATTAATGCAAGAAGATAAAGTGATTCCTAATCTAGAGAACTGGGTAGTAATGCTTAATGCTTATTGTCAGCAAGGCAAAATGGAGGAAGCTGAACTTGTATTTGCCTCAATGGAAGAAGCTGGGTTTTCATCCAATATCATTGCATATAATACCTTGATTACTGGGTATGGGAAGGCATCAAATATGGATACTGCTCAACGCCTGTTCTTGGGCATCAAGAACTCTGGAGTAGAACCTGATGAAACGACTTACCGCTCCATGATTGAAGGTTGGGGTCGAGCTGGTAATTATAAAATGGCAGAATGGTATTATAAGGAGCTCAAACGGAGAGGATATATGCCGAATTCCTCTAACTTGTTCACCCTCATAAATCTACAAGCCAAACATGAGGATGAAGCAGGTACACTTAAAACTCTAAATGATATGCTAAAGATTGGATGCCGGCCTTCTTCCATTGTTGGAAATGTTTTGCAAGCATATGAAAAGGCTAGAAGAATGAAAAGTGTGCCTGTCCTCTTGACAGGGTCGTTCTATCGGAAAGTTCTGAGCAGCCAGACATCTTGCTCAATTCTGGTAATGGCTTATGTGAAGCACTGTTTAGTGGATGACGCTTTAAAAGTGTTGAGGGAAAAGGAGTGGAAAGATCATCATTTTGAGGAGAATTTGTATCATTTGCTAATTTGTTCATGTAAAGAGTTGGGCCATCTCGAGAATGCAATTAAGATATACACACAACTGCCTAAACGTGAAAACAAACCGAACTTGCATATCACATGCACAATGATTGATATCTACAGCATCATGGGTAGGTTCTCTGACGGGGAGAAGCTTTATCTAAGCCTGAGATCATCAGGCATTCCTTTGGATTTGATTGCTTATAATGTTGTTGTGAGAATGTATGTTAAAGCTGGATCATTGGAAGATGCATGCTCAGTTCTTGACTTGATGGCTGAGCAGCAGGACATTGTTCCGGACATATATCTGTTACGGGACATGCTTCGTATTTACCAACGATGTGGCATGGTGCATAAGCTAGCAGATCTGTACTATAGGATATTGAAGAGTGGAGTGTCTTGGGATCAGGAAATGTATAATTGTGTCATAAATTGCTGTTCCCGTGCTCTGCCTGTTGATGAGCTTTCTAGGCTTTTTGATGAAATGCTTCAATGTGGTTTTGCCCCAAATACAGTGACCTTGAATGTCATGCTTGACGTTTATGGGAAATCCAAGCTTTTCACTAAGGCTAGAAATCTCTTTGGGCTTGCTCAGAAAAGAGGTTTGGTTGATGCAATCTCTTATAATACTATGATATCTGTCTATGGGAAGAATAAGGACTTCAAAAACATGTCATCTACGGTTCAGAAAATGAAATTTAACGGGTTTTCAGTTTCCCTTGAAGCCTACAATTGTATGTTGGATGCTTATGGCAAAGAATGCCAAATGGAGAATTTCAGAAGTGTCTTGCAGCGAATGCAGGAGACAAGTTCTGAATGTGACCATTATACGTACAACATCATGATCAACATCTATGGAGAACAAGGATGGATAGATGAAGTTGCGGAAGTTCTGACAGAATTGAAAGCATGTGGACTTGAACCCGATCTGTACAGCTACAACACATTGATCAAGGCATATGGAATAGCAGGGATGGTTGAAGAAGCTGCTCAGTTGGTGAAAGAAATGAGAGAAAAGAGGATAGAACCAGATAGGATAACTTATATTAACATGATTAGAGCACTGCAAAGAAACGATCAATTTTTAGAGGCAGTCAAGTGGTCATTGTGGATGAAGCAGATGAAATATTGA

Protein sequence

MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKVSQVEQDASDVSQSRFDEIVARKKYFTSKKPSKRAAGSHFSFSRNCNDNILFNGGELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQAKHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGLVDAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTLIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKWSLWMKQMKY*

Homology

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BLAST of Csa1G257890 vs. Swiss-Prot
Match: PP342_ARATH (Pentatricopeptide repeat-containing protein At4g30825, chloroplastic OS=Arabidopsis thaliana GN=At4g30825 PE=2 SV=2)

HSP 1 Score: 1082.8 bits (2799), Expect = 0.0e+00
Identity = 546/902 (60.53%), Postives = 675/902 (74.83%), Query Frame = 1


Query: 1   MASLKLSFSLHSFDSNK--FDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPS 60
           M SL+ S  L  FDS +  F F  N     D   +  + + +H  ++S I S  RV    
Sbjct: 1   MGSLRFSIPLDPFDSKRKRFHFSANPSQFPDQFPIHFVTSSIHATRASSIGSSTRVLDKI 60

Query: 61  KVSQVEQDASDVSQSRFDEIVARK----KYFTSKKPSKRAAGSHFSFSRNCND----NIL 120
           +VS +  +A++ + +        +    K    ++ +K+     FSF R  ND    N+ 
Sbjct: 61  RVSSLGTEANENAINSASAAPVERSRSSKLSGDQRGTKKYVARKFSFRRGSNDLELENLF 120

Query: 121 FNGGELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLV 180
            N GE+DVNYS I    SLE CN ILKRLE C+D+  + FF+WMR NGKL  N  AY+L+
Sbjct: 121 VNNGEIDVNYSAIKPGQSLEHCNGILKRLESCSDTNAIKFFDWMRCNGKLVGNFVAYSLI 180

Query: 181 LRVLGRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQ 240
           LRVLGR+E+WD AE LI+E+      Q  +QVFNT+IYAC K   V+  +KWF MMLE  
Sbjct: 181 LRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFG 240

Query: 241 VQPNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEE 300
           V+PNVAT GMLMGLYQK  +++E+EFAF+ MR FGIVCE+AY+SMITIY R+ LYDKAEE
Sbjct: 241 VRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTRLRLYDKAEE 300

Query: 301 VIQLMQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYG 360
           VI LM++D+V   LENW+VMLNAY QQGKME AE +  SME AGFS NIIAYNTLITGYG
Sbjct: 301 VIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYG 360

Query: 361 KASNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSS 420
           K   M+ AQ LF  + N G+EPDET+YRSMIEGWGRA NY+ A+ YY+ELKR GY PNS 
Sbjct: 361 KIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSF 420

Query: 421 NLFTLINLQAKHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSF 480
           NLFTLINLQAK+ D  G +KT+ DM  IGC+ SSI+G +LQAYEK  ++  VP +L GSF
Sbjct: 421 NLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSF 480

Query: 481 YRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLE 540
           +  +  +QTS S LVMAYVKH +VDD L +LREK+W+D  FE +LYHLLICSCKE G L 
Sbjct: 481 HNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLT 540

Query: 541 NAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVV 600
           +A+KIY    + + + NLHIT TMIDIY++MG FS+ EKLYL+L+SSG+ LD I +++VV
Sbjct: 541 DAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVV 600

Query: 601 RMYVKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGV 660
           RMYVKAGSLE+ACSVL++M EQ+DIVPD+YL RDMLRIYQ+C +  KL  LYYRI KSG+
Sbjct: 601 RMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGI 660

Query: 661 SWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARN 720
            W+QEMYNCVINCC+RALP+DELS  F+EM++ GF PNTVT NV+LDVYGK+KLF K   
Sbjct: 661 HWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNE 720

Query: 721 LFGLAQKRGLVDAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGK 780
           LF LA++ G+VD ISYNT+I+ YGKNKD+ NMSS ++ M+F+GFSVSLEAYN +LDAYGK
Sbjct: 721 LFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGK 780

Query: 781 ECQMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYS 840
           + QME FRS+L+RM++++S  DHYTYNIMINIYGEQGWIDEVA+VL ELK  GL PDL S
Sbjct: 781 DKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCS 840

Query: 841 YNTLIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKWSLWMK 893
           YNTLIKAYGI GMVEEA  LVKEMR + I PD++TY N++ AL+RND+FLEA+KWSLWMK
Sbjct: 841 YNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMK 900

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BLAST of Csa1G257890 vs. Swiss-Prot
Match: PP217_ARATH (Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 6.4e-48
Identity = 163/751 (21.70%), Postives = 331/751 (44.07%), Query Frame = 1


Query: 135 ILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDWDAAEKLIEEVR-AE 194
           +L+RL+  N  + + +F W     +L H   +YN +L V+ R  ++DA ++++ E+  A 
Sbjct: 71  VLRRLKDVN--RAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAG 130

Query: 195 LGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGMLMGLYQKKCDIKE 254
            G  ++  +   ++  C K+  + +G    +MM + + +P  + +  L+G +        
Sbjct: 131 FGPSVNTCI--EMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDM 190

Query: 255 SEFAFNQMRNFGIVCET-AYASMITIYIRMNLYDKAEEVIQLMQEDKVIPNLENWVVMLN 314
               F QM+  G       + ++I  + +    D A  ++  M+   +  ++  + V ++
Sbjct: 191 MLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCID 250

Query: 315 AYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQRLFLGIKNSGVEP 374
           ++ + GK++ A   F  +E  G   + + Y ++I    KA+ +D A  +F  ++ +   P
Sbjct: 251 SFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVP 310

Query: 375 DETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQAKHEDEAGTLKTL 434
               Y +MI G+G AG +  A    +  + +G +P+      ++    K       LK  
Sbjct: 311 CTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVF 370

Query: 435 NDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLSSQTSCSILVMAYVKHC 494
            +M K      S    ++    +A ++ +   L        +  +  + +I+V    K  
Sbjct: 371 EEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQ 430

Query: 495 LVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLPKRENKPNLHITC 554
            +D+A  +  E ++K    +E  +  LI    ++G +++A K+Y ++   + + N  +  
Sbjct: 431 KLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYT 490

Query: 555 TMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLEDACSVLDLMAEQ 614
           ++I  +   GR  DG K+Y  + +     DL   N  +    KAG  E   ++ + +  +
Sbjct: 491 SLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKAR 550

Query: 615 QDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCVINCCSRALPVDE 674
           +  VPD      ++    + G  ++  +L+Y + + G   D   YN VI+   +   V++
Sbjct: 551 R-FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNK 610

Query: 675 LSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQ-KRGLVDAISYNTMIS 734
             +L +EM   GF P  VT   ++D   K     +A  LF  A+ KR  ++ + Y+++I 
Sbjct: 611 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 670

Query: 735 VYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRMQETSSEC 794
            +GK          ++++   G + +L  +N +LDA  K  ++       Q M+E     
Sbjct: 671 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 730

Query: 795 DHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTLIKAYGIAGMVEEAAQLV 854
           +  TY I+IN   +    ++      E++  G++P   SY T+I     AG + EA  L 
Sbjct: 731 NQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALF 790

Query: 855 KEMREKRIEPDRITYINMIRALQRNDQFLEA 883
              +     PD   Y  MI  L   ++ ++A
Sbjct: 791 DRFKANGGVPDSACYNAMIEGLSNGNRAMDA 816

[Close]

BLAST of Csa1G257890 vs. Swiss-Prot
Match: PP344_ARATH (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.1e-47
Identity = 171/745 (22.95%), Postives = 336/745 (45.10%), Query Frame = 1


Query: 139  LEKCNDSKTLG----FFEWMRSNGKLKHNVSAYNLVLRVLGRQEDWDAAEKLIEEVRAEL 198
            L++ +D++ L     F+  M  +G +  +V  + +++  L +  ++  A   ++ +R + 
Sbjct: 335  LDRFSDNRDLDSVKQFWSEMEKDGHVP-DVVTFTILVDALCKAGNFGEAFDTLDVMRDQ- 394

Query: 199  GSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGMLMGLYQKKCDIKES 258
            G   +   +NTLI    +   ++   + F  M    V+P   T+ + +  Y K  D   +
Sbjct: 395  GILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSA 454

Query: 259  EFAFNQMRNFGIVCETAYASMITIYIRMNLYDK-AEEVIQLMQEDKVIPNLENWVVMLNA 318
               F +M+  GI       +     +     D+ A+++   +++  ++P+   + +M+  
Sbjct: 455  LETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKC 514

Query: 319  YCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQRLFLGIKNSGVEPD 378
            Y + G+++EA  + + M E G   ++I  N+LI    KA  +D A ++F+ +K   ++P 
Sbjct: 515  YSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPT 574

Query: 379  ETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQAKHEDEAGTLKTLN 438
              TY +++ G G+ G  + A   ++ + ++G  PN+    TL +   K+++    LK L 
Sbjct: 575  VVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLF 634

Query: 439  DMLKIGCRPSSIVGN-VLQAYEKARRMKSVPVLLTGSFYRKVLSSQTSCSILVMAYVKHC 498
             M+ +GC P     N ++    K  ++K   +       + V     +   L+   VK  
Sbjct: 635  KMMDMGCVPDVFTYNTIIFGLVKNGQVKEA-MCFFHQMKKLVYPDFVTLCTLLPGVVKAS 694

Query: 499  LVDDALKVLREKEWKDHHFEENLY-HLLICSCKELGHLENAIKIYTQLPKRENKPNLHIT 558
            L++DA K++    +       NL+   LI S      ++NA+    +L       +    
Sbjct: 695  LIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSI 754

Query: 559  CTMIDIYSIMGRFSDGEKLYLS--LRSSGIPLDLIAYNVVVRMYVKAGSLEDACSVLDLM 618
               I  YS       G +       +  G+   L  YN+++   ++A  +E A  V  L 
Sbjct: 755  LVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVF-LQ 814

Query: 619  AEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCVINCCSRALP 678
             +    +PD+     +L  Y + G + +L +LY  +       +   +N VI+   +A  
Sbjct: 815  VKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGN 874

Query: 679  VDE-LSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLF-GLAQKRGLVDAISYN 738
            VD+ L   +D M    F+P   T   ++D   KS    +A+ LF G+       +   YN
Sbjct: 875  VDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYN 934

Query: 739  TMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRMQET 798
             +I+ +GK  +     +  ++M   G    L+ Y+ ++D      +++      + ++E+
Sbjct: 935  ILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES 994

Query: 799  SSECDHYTYNIMINIYGEQGWIDEVAEVLTELKAC-GLEPDLYSYNTLIKAYGIAGMVEE 858
                D   YN++IN  G+   ++E   +  E+K   G+ PDLY+YN+LI   GIAGMVEE
Sbjct: 995  GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE 1054

Query: 859  AAQLVKEMREKRIEPDRITYINMIR 872
            A ++  E++   +EP+  T+  +IR
Sbjct: 1055 AGKIYNEIQRAGLEPNVFTFNALIR 1075

HSP 2 Score: 152.9 bits (385), Expect = 1.6e-35
Identity = 161/792 (20.33%), Postives = 346/792 (43.69%), Query Frame = 1


Query: 120 YSTISSDLSL----EDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLG 179
           + +++ +L+L    E CN +L+ L      + + +   +     +K + + Y  + + L 
Sbjct: 105 FKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLS 164

Query: 180 RQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNV 239
            +     A   + ++R E G  L+   +N LI+   KSRF  +  + +R M+    +P++
Sbjct: 165 VKGGLKQAPYALRKMR-EFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSL 224

Query: 240 ATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCET-AYASMITIYIRMNLYDKAEEVIQL 299
            T+  LM    K+ DI        +M   G+      +   I +  R    ++A E+++ 
Sbjct: 225 QTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKR 284

Query: 300 MQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASN 359
           M ++   P++  + V+++A C   K++ A+ VF  M+      + + Y TL+  +    +
Sbjct: 285 MDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRD 344

Query: 360 MDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFT 419
           +D+ ++ +  ++  G  PD  T+  +++   +AGN+  A      ++ +G +PN     T
Sbjct: 345 LDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNT 404

Query: 420 LIN--LQAKHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYR 479
           LI   L+    D+A  L+   +M  +G +P++    V   Y   +   SV  L T   + 
Sbjct: 405 LICGLLRVHRLDDA--LELFGNMESLGVKPTAYTYIVFIDYY-GKSGDSVSALET---FE 464

Query: 480 KVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHF---------EENLYHLLICSC 539
           K+ +   + +I+      + L     K  R++E K   +         +   Y++++   
Sbjct: 465 KMKTKGIAPNIVACNASLYSLA----KAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCY 524

Query: 540 KELGHLENAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDL 599
            ++G ++ AIK+ +++ +   +P++ +  ++I+      R  +  K+++ ++   +   +
Sbjct: 525 SKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTV 584

Query: 600 IAYNVVVRMYVKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYY 659
           + YN ++    K G +++A  + + M  Q+   P+      +     +   V     + +
Sbjct: 585 VTYNTLLAGLGKNGKIQEAIELFEGMV-QKGCPPNTITFNTLFDCLCKNDEVTLALKMLF 644

Query: 660 RILKSGVSWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSK 719
           +++  G   D   YN +I    +   V E    F +M +  + P+ VTL  +L    K+ 
Sbjct: 645 KMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY-PDFVTLCTLLPGVVKAS 704

Query: 720 LFTKA---------------RNLF------GLAQKRGLVDAISYNTMISVYGKNKDFKNM 779
           L   A                NLF       +  + G+ +A+S++  +   G  +D  ++
Sbjct: 705 LIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSI 764

Query: 780 SSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRM-QETSSECDHYTYNIMIN 839
                        V +  Y+C      K   +   R++ ++  ++   +    TYN++I 
Sbjct: 765 L------------VPIIRYSC------KHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIG 824

Query: 840 IYGEQGWIDEVAEVLTELKACGLEPDLYSYNTLIKAYGIAGMVEEAAQLVKEMREKRIEP 874
              E   I+   +V  ++K+ G  PD+ +YN L+ AYG +G ++E  +L KEM     E 
Sbjct: 825 GLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEA 865

HSP 3 Score: 141.4 bits (355), Expect = 5.0e-32
Identity = 150/760 (19.74%), Postives = 320/760 (42.11%), Query Frame = 1


Query: 128 SLEDCNAILKRLEKCND-SKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDWDAAEKL 187
           SL+  ++++  L K  D    +G  + M + G LK NV  + + +RVLGR    + A ++
Sbjct: 222 SLQTYSSLMVGLGKRRDIDSVMGLLKEMETLG-LKPNVYTFTICIRVLGRAGKINEAYEI 281

Query: 188 IEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGMLMGLYQ 247
           ++ +  E G   D   +  LI A   +R ++   + F  M   + +P+  T+  L+  + 
Sbjct: 282 LKRMDDE-GCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFS 341

Query: 248 KKCDIKESEFAFNQMRNFGIVCETA-YASMITIYIRMNLYDKAEEVIQLMQEDKVIPNLE 307
              D+   +  +++M   G V +   +  ++    +   + +A + + +M++  ++PNL 
Sbjct: 342 DNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLH 401

Query: 308 NWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQRLFLGI 367
            +  ++    +  ++++A  +F +ME  G       Y   I  YGK+ +  +A   F  +
Sbjct: 402 TYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKM 461

Query: 368 KNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQAKHEDE 427
           K  G+ P+     + +    +AG  + A+  +  LK  G +P+S     ++   +K  + 
Sbjct: 462 KTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEI 521

Query: 428 AGTLKTLNDMLKIGCRPSSIVGN-VLQAYEKARRMKSVPVLLTGSFYRKVLSSQTSCSIL 487
              +K L++M++ GC P  IV N ++    KA R+     +       K+  +  + + L
Sbjct: 522 DEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTL 581

Query: 488 VMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLI-CSCKELGHLENAIKIYTQLPKRE 547
           +    K+  + +A+++      K        ++ L  C CK    +  A+K+  ++    
Sbjct: 582 LAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKN-DEVTLALKMLFKMMDMG 641

Query: 548 NKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLEDAC 607
             P++    T+I      G+  +    +  ++    P D +    ++   VKA  +EDA 
Sbjct: 642 CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYP-DFVTLCTLLPGVVKASLIEDAY 701

Query: 608 SVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEM------- 667
            ++          P      D++        +        R++ +G+  D +        
Sbjct: 702 KIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIR 761

Query: 668 YNCVINCCSRALPVDELSRLFDEMLQ-CGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLA 727
           Y+C  N  S A        LF++  +  G  P   T N+++    ++ +   A+++F   
Sbjct: 762 YSCKHNNVSGA------RTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQV 821

Query: 728 QKRGLV-DAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQM 787
           +  G + D  +YN ++  YGK+     +    ++M  +    +   +N ++    K   +
Sbjct: 822 KSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNV 881

Query: 788 ENFRSVL-QRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNT 847
           ++   +    M +        TY  +I+   + G + E  ++   +   G  P+   YN 
Sbjct: 882 DDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNI 941

Query: 848 LIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRAL 874
           LI  +G AG  + A  L K M ++ + PD  TY  ++  L
Sbjct: 942 LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCL 971

HSP 4 Score: 75.5 bits (184), Expect = 3.3e-12
Identity = 56/264 (21.21%), Postives = 125/264 (47.35%), Query Frame = 1


Query: 156  SNGKLKHNVSAYNLVLRVLGRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRF 215
            S  + + N   +N+V+  L +  + D A  L  ++ ++         +  LI    KS  
Sbjct: 847  STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 906

Query: 216  VEQGTKWFRMMLECQVQPNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCET-AYAS 275
            + +  + F  ML+   +PN A + +L+  + K  +   +   F +M   G+  +   Y+ 
Sbjct: 907  LYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSV 966

Query: 276  MITIYIRMNLYDKAEEVIQLMQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEA- 335
            ++     +   D+     + ++E  + P++  + +++N   +  ++EEA ++F  M+ + 
Sbjct: 967  LVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSR 1026

Query: 336  GFSSNIIAYNTLITGYGKASNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMA 395
            G + ++  YN+LI   G A  ++ A +++  I+ +G+EP+  T+ ++I G+  +G  + A
Sbjct: 1027 GITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHA 1086

Query: 396  EWYYKELKRRGYMPNSSNLFTLIN 418
               Y+ +   G+ PN+     L N
Sbjct: 1087 YAVYQTMVTGGFSPNTGTYEQLPN 1110

[Close]

BLAST of Csa1G257890 vs. Swiss-Prot
Match: PP362_ARATH (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.2e-46
Identity = 138/589 (23.43%), Postives = 266/589 (45.16%), Query Frame = 1


Query: 304 LENWVV--MLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQRL 363
           L+N VV  +++   ++G++  A  +F  ++E GFS ++ +Y +LI+ +  +     A  +
Sbjct: 171 LDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNV 230

Query: 364 FLGIKNSGVEPDETTYRSMIEGWGRAGN-YKMAEWYYKELKRRGYMPNSSNLFTLINLQA 423
           F  ++  G +P   TY  ++  +G+ G  +       +++K  G  P++    TLI    
Sbjct: 231 FKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCK 290

Query: 424 KHEDEAGTLKTLNDMLKIGCRPSSIVGN-VLQAYEKARRMKSVPVLLTGSFYRKVLSSQT 483
           +        +   +M   G     +  N +L  Y K+ R K    +L          S  
Sbjct: 291 RGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIV 350

Query: 484 SCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQL 543
           + + L+ AY +  ++D+A+++  +   K    +   Y  L+   +  G +E+A+ I+ ++
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410

Query: 544 PKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSL 603
                KPN+      I +Y   G+F++  K++  +   G+  D++ +N ++ ++ + G  
Sbjct: 411 RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMD 470

Query: 604 EDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNC 663
            +   V   M ++   VP+      ++  Y RCG   +   +Y R+L +GV+ D   YN 
Sbjct: 471 SEVSGVFKEM-KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNT 530

Query: 664 VINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSK----LFTKARNLF-GL 723
           V+   +R    ++  ++  EM      PN +T   +L  Y   K    + + A  ++ G+
Sbjct: 531 VLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV 590

Query: 724 AQKRGLVDAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQM 783
            + R    A+   T++ V  K            ++K  GFS  +   N M+  YG+   +
Sbjct: 591 IEPR----AVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMV 650

Query: 784 ENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTL 843
                VL  M+E        TYN ++ ++       +  E+L E+ A G++PD+ SYNT+
Sbjct: 651 AKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTV 710

Query: 844 IKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAV 884
           I AY     + +A+++  EMR   I PD ITY   I +   +  F EA+
Sbjct: 711 IYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAI 754

HSP 2 Score: 178.3 bits (451), Expect = 3.7e-43
Identity = 144/646 (22.29%), Postives = 285/646 (44.12%), Query Frame = 1


Query: 222 WFRMMLECQVQPNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCET-AYASMITIYI 281
           WF    + Q   + +   +++ +  K+  +  +   FN ++  G   +  +Y S+I+ + 
Sbjct: 160 WFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFA 219

Query: 282 RMNLYDKAEEVIQLMQEDKVIPNLENWVVMLNAYCQQGK-MEEAELVFASMEEAGFSSNI 341
               Y +A  V + M+ED   P L  + V+LN + + G    +   +   M+  G + + 
Sbjct: 220 NSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDA 279

Query: 342 IAYNTLITGYGKASNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKE 401
             YNTLIT   + S    A ++F  +K +G   D+ TY ++++ +G++   K A     E
Sbjct: 280 YTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNE 339

Query: 402 LKRRGYMPNSSNLFTLINLQAKHE--DEAGTLKTLNDMLKIGCRPSSIV-GNVLQAYEKA 461
           +   G+ P+     +LI+  A+    DEA  LK  N M + G +P       +L  +E+A
Sbjct: 340 MVLNGFSPSIVTYNSLISAYARDGMLDEAMELK--NQMAEKGTKPDVFTYTTLLSGFERA 399

Query: 462 RRMKSVPVLLTGSFYRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLY 521
            +++S   +           +  + +  +  Y       + +K+  E        +   +
Sbjct: 400 GKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTW 459

Query: 522 HLLICSCKELGHLENAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRS 581
           + L+    + G       ++ ++ +    P      T+I  YS  G F     +Y  +  
Sbjct: 460 NTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLD 519

Query: 582 SGIPLDLIAYNVVVRMYVKAGSLEDACSVLDLMAEQQD--IVPDIYLLRDMLRIY---QR 641
           +G+  DL  YN V+    + G  E +  VL   AE +D    P+      +L  Y   + 
Sbjct: 520 AGVTPDLSTYNTVLAALARGGMWEQSEKVL---AEMEDGRCKPNELTYCSLLHAYANGKE 579

Query: 642 CGMVHKLADLYYRILKSGVSWDQE-MYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTV 701
            G++H LA+  Y    SGV   +  +   ++  CS+   + E  R F E+ + GF+P+  
Sbjct: 580 IGLMHSLAEEVY----SGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDIT 639

Query: 702 TLNVMLDVYGKSKLFTKARNLFGLAQKRGLVDAI-SYNTMISVYGKNKDFKNMSSTVQKM 761
           TLN M+ +YG+ ++  KA  +    ++RG   ++ +YN+++ ++ ++ DF      ++++
Sbjct: 640 TLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREI 699

Query: 762 KFNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWI 821
              G    + +YN ++ AY +  +M +   +   M+ +    D  TYN  I  Y      
Sbjct: 700 LAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMF 759

Query: 822 DEVAEVLTELKACGLEPDLYSYNTLIKAYGIAGMVEEAAQLVKEMR 856
           +E   V+  +   G  P+  +YN+++  Y      +EA   V+++R
Sbjct: 760 EEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796

HSP 3 Score: 144.1 bits (362), Expect = 7.6e-33
Identity = 140/715 (19.58%), Postives = 294/715 (41.12%), Query Frame = 1


Query: 116 LDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLG 175
           ++ N+ +   D  L +     K   +   S+ L F + +  + K       ++L LR   
Sbjct: 107 IEPNFDSGQLDSVLSELFEPFKDKPESTSSELLAFLKGLGFHKK-------FDLALRAF- 166

Query: 176 RQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNV 235
              DW   +K       +  S LD  V   +I    K   V      F  + E     +V
Sbjct: 167 ---DWFMKQK-------DYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDV 226

Query: 236 ATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETA---YASMITIYIRMNL-YDKAEEV 295
            ++  L+  +      +E+   F +M   G  C+     Y  ++ ++ +M   ++K   +
Sbjct: 227 YSYTSLISAFANSGRYREAVNVFKKMEEDG--CKPTLITYNVILNVFGKMGTPWNKITSL 286

Query: 296 IQLMQEDKVIPNLENWVVMLNAYCQQGKM-EEAELVFASMEEAGFSSNIIAYNTLITGYG 355
           ++ M+ D + P+   +  ++   C++G + +EA  VF  M+ AGFS + + YN L+  YG
Sbjct: 287 VEKMKSDGIAPDAYTYNTLITC-CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYG 346

Query: 356 KASNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSS 415
           K+     A ++   +  +G  P   TY S+I  + R G    A     ++  +G  P+  
Sbjct: 347 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 406

Query: 416 NLFTLINLQAKHEDEAGTLKTLNDMLKIGCRPSSIVGNV-LQAYEKARRMKSVPVLLTGS 475
              TL++   +       +    +M   GC+P+    N  ++ Y    +   +  +    
Sbjct: 407 TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 466

Query: 476 FYRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHL 535
               +     + + L+  + ++ +  +   V +E +      E   ++ LI +    G  
Sbjct: 467 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 526

Query: 536 ENAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVV 595
           E A+ +Y ++      P+L    T++   +  G +   EK+   +       + + Y  +
Sbjct: 527 EQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL 586

Query: 596 VRMYVKAGSLEDACSVLDLMAEQ---QDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRIL 655
           +  Y     +     ++  +AE+     I P   LL+ ++ +  +C ++ +    +  + 
Sbjct: 587 LHAYANGKEI----GLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELK 646

Query: 656 KSGVSWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFT 715
           + G S D    N +++   R   V + + + D M + GF P+  T N ++ ++ +S  F 
Sbjct: 647 ERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFG 706

Query: 716 KARNLFGLAQKRGL-VDAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCML 775
           K+  +      +G+  D ISYNT+I  Y +N   ++ S    +M+ +G    +  YN  +
Sbjct: 707 KSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFI 766

Query: 776 DAYGKECQMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELK 821
            +Y  +   E    V++ M +     +  TYN +++ Y +    DE    + +L+
Sbjct: 767 GSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796

[Close]

BLAST of Csa1G257890 vs. Swiss-Prot
Match: PP325_ARATH (Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2 SV=2)

HSP 1 Score: 169.9 bits (429), Expect = 1.3e-40
Identity = 137/577 (23.74%), Postives = 257/577 (44.54%), Query Frame = 1


Query: 275 MITIYIRMNLYDKAEEVIQLMQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEAG 334
           ++T  +R N + K  E   ++ +  V P++  +   +NA+C+ GK+EEA  +F+ MEEAG
Sbjct: 245 LLTSLVRANEFQKCCEAFDVVCKG-VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG 304

Query: 335 FSSNIIAYNTLITGYGKASNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAE 394
            + N++ +NT+I G G     D A      +   G+EP   TY  +++G  RA     A 
Sbjct: 305 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 364

Query: 395 WYYKELKRRGYMPNSSNLFTLIN--LQAKHEDEAGTLKTLNDMLKIGCR-PSSIVGNVLQ 454
           +  KE+ ++G+ PN      LI+  ++A   ++A  +K L  M+  G    SS    +++
Sbjct: 365 FVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDL--MVSKGLSLTSSTYNTLIK 424

Query: 455 AYEKARRMKSVPVLLTGSFYRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHF 514
            Y K  +  +   LL          +Q S + ++     H + D AL+ + E   ++   
Sbjct: 425 GYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSP 484

Query: 515 EENLYHLLICSCKELGHLENAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLY 574
              L   LI    + G    A++++ Q   +    +   +  ++      G+  +  ++ 
Sbjct: 485 GGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQ 544

Query: 575 LSLRSSGIPLDLIAYNVVVRMYVKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQR 634
             +   G  +D ++YN ++        L++A   LD M  ++ + PD Y    ++     
Sbjct: 545 KEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV-KRGLKPDNYTYSILICGLFN 604

Query: 635 CGMVHKLADLYYRILKSGVSWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVT 694
              V +    +    ++G+  D   Y+ +I+ C +A   +E    FDEM+     PNTV 
Sbjct: 605 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 664

Query: 695 LNVMLDVYGKSKLFTKARNLFGLAQKRGL-VDAISYNTMISVYGKNKDFKNMSSTVQKMK 754
            N ++  Y +S   + A  L    + +G+  ++ +Y ++I         +      ++M+
Sbjct: 665 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 724

Query: 755 FNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWID 814
             G   ++  Y  ++D YGK  QM     +L+ M   +   +  TY +MI  Y   G + 
Sbjct: 725 MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVT 784

Query: 815 EVAEVLTELKACGLEPDLYSYNTLIKAYGIAGMVEEA 848
           E + +L E++  G+ PD  +Y   I  Y   G V EA
Sbjct: 785 EASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 817

HSP 2 Score: 116.3 bits (290), Expect = 1.7e-24
Identity = 125/546 (22.89%), Postives = 225/546 (41.21%), Query Frame = 1


Query: 195 GSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGMLM-GLYQKKCDIKE 254
           G   D  +F T I A  K   VE+  K F  M E  V PNV TF  ++ GL    C   +
Sbjct: 268 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGM--CGRYD 327

Query: 255 SEFAFNQ-MRNFGIVCET-AYASMITIYIRMNLYDKAEEVIQLMQEDKVIPNLENWVVML 314
             F F + M   G+      Y+ ++    R      A  V++ M +    PN+  +  ++
Sbjct: 328 EAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI 387

Query: 315 NAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQRLFLGIKNSGVE 374
           +++ + G + +A  +   M   G S     YNTLI GY K    D A+RL   + + G  
Sbjct: 388 DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 447

Query: 375 PDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQAKHEDEAGTLKT 434
            ++ ++ S+I        +  A  +  E+  R   P    L TLI+   KH   +  L+ 
Sbjct: 448 VNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 507

Query: 435 LNDMLKIGCRPSSIVGN-VLQAYEKARRMKSVPVLLTGSFYRKVLSSQTSCSILVMAYVK 494
               L  G    +   N +L    +A ++     +      R  +  + S + L+     
Sbjct: 508 WFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG 567

Query: 495 HCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLPKRENKPNLHI 554
              +D+A   L E   +    +   Y +LIC    +  +E AI+ +    +    P+++ 
Sbjct: 568 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 627

Query: 555 TCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLEDACSVLDLMA 614
              MID      R  +G++ +  + S  +  + + YN ++R Y ++G L  A  + + M 
Sbjct: 628 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM- 687

Query: 615 EQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCVINCCSRALPV 674
           + + I P+      +++       V +   L+  +   G+  +   Y  +I+   +   +
Sbjct: 688 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQM 747

Query: 675 DELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGLV-DAISYNTM 734
            ++  L  EM      PN +T  VM+  Y +    T+A  L    +++G+V D+I+Y   
Sbjct: 748 VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEF 807

Query: 735 ISVYGK 736
           I  Y K
Sbjct: 808 IYGYLK 810

HSP 3 Score: 73.6 bits (179), Expect = 1.3e-11
Identity = 56/249 (22.49%), Postives = 109/249 (43.78%), Query Frame = 1


Query: 643 YRILKSGVSWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKS 702
           + ++  GVS D  ++   IN   +   V+E  +LF +M + G APN VT N ++D  G  
Sbjct: 262 FDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMC 321

Query: 703 KLFTKARNLFGLAQKRGLVDA-ISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAY 762
             + +A        +RG+    I+Y+ ++    + K   +    +++M   GF  ++  Y
Sbjct: 322 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 381

Query: 763 NCMLDAYGKECQMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKA 822
           N ++D++ +   +     +   M          TYN +I  Y + G  D    +L E+ +
Sbjct: 382 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 441

Query: 823 CGLEPDLYSYNTLIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLE 882
            G   +  S+ ++I       M + A + V EM  + + P       +I  L ++ +  +
Sbjct: 442 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 501

Query: 883 AVKWSLWMK 891
           A++  LW +
Sbjct: 502 ALE--LWFQ 508

HSP 4 Score: 67.8 bits (164), Expect = 7.0e-10
Identity = 69/344 (20.06%), Postives = 144/344 (41.86%), Query Frame = 1


Query: 546 PNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLEDACSV 605
           P++++  T I+ +   G+  +  KL+  +  +G+  +++ +N V+      G  ++A   
Sbjct: 271 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 330

Query: 606 LDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYY---RILKSGVSWDQEMYNCVIN 665
            + M E+  + P +     +++   R     ++ D Y+    + K G   +  +YN +I+
Sbjct: 331 KEKMVER-GMEPTLITYSILVKGLTRA---KRIGDAYFVLKEMTKKGFPPNVIVYNNLID 390

Query: 666 CCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGL-V 725
               A  +++   + D M+  G +  + T N ++  Y K+     A  L       G  V
Sbjct: 391 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 450

Query: 726 DAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSVL 785
           +  S+ ++I +   +  F +    V +M     S        ++    K  +      + 
Sbjct: 451 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 510

Query: 786 QRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTLIKAYGIA 845
            +        D  T N +++   E G +DE   +  E+   G   D  SYNTLI      
Sbjct: 511 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 570

Query: 846 GMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKW 886
             ++EA   + EM ++ ++PD  TY  +I  L   ++  EA+++
Sbjct: 571 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQF 610

HSP 5 Score: 63.5 bits (153), Expect = 1.3e-08
Identity = 84/416 (20.19%), Postives = 172/416 (41.35%), Query Frame = 1


Query: 503 EKEWKDHHFEENLYHLLIC------SCKELGHLENAIKIYTQLPKRENKPNLHITCTMID 562
           E+   D H  E L  +L         CK+L  + + ++     P+  +K N     T +D
Sbjct: 68  EETSSDRHLHERLSSVLSKRSLDYEQCKQLITVLSPLEFDRLFPEFRSKVNPK---TALD 127

Query: 563 IYSIMGRFSDGEKLYLSLRSSGIPLDLI--------AYNVVVRMY------VKAGSLEDA 622
            + +    SD      SLRS  + + L+        A  V++R+       +  G  +  
Sbjct: 128 FFRLA---SDSFSFSFSLRSYCLLIGLLLDANLLSAARVVLIRLINGNVPVLPCGLRDSR 187

Query: 623 CSVLDLMA------------EQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGV 682
            ++ D MA            +  D++ ++Y  +     ++R G    L D++  +   G+
Sbjct: 188 VAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQ-----FKRDGCYLAL-DVFPVLANKGM 247

Query: 683 SWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARN 742
              +   N ++    RA    +    FD + + G +P+       ++ + K     +A  
Sbjct: 248 FPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEAVK 307

Query: 743 LFGLAQKRGLV-DAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYG 802
           LF   ++ G+  + +++NT+I   G    +       +KM   G   +L  Y+ ++    
Sbjct: 308 LFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLT 367

Query: 803 KECQMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLY 862
           +  ++ +   VL+ M +     +   YN +I+ + E G +++  E+   + + GL     
Sbjct: 368 RAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSS 427

Query: 863 SYNTLIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKW 886
           +YNTLIK Y   G  + A +L+KEM       ++ ++ ++I  L  +  F  A+++
Sbjct: 428 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 470

[Close]

BLAST of Csa1G257890 vs. TrEMBL
Match: B9SQY5_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1406220 PE=4 SV=1)

HSP 1 Score: 1199.1 bits (3101), Expect = 0.0e+00
Identity = 599/918 (65.25%), Postives = 738/918 (80.39%), Query Frame = 1


Query: 1   MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV 60
           MASL+L+ SL +FDS K +F  N   LS + S FSI++      + II +L     P KV
Sbjct: 37  MASLRLTISLDTFDSKKPNFSRNPLQLSTHTSPFSISSSTPSPGACIITTLT-TFSPVKV 96

Query: 61  SQVEQDA--SDVSQSRFDEIV------------------ARKKYFT-SKKPSKRAAGSHF 120
           S++E +    DV  S  +++                    RKKY   +KK  KR  G  F
Sbjct: 97  SRIETELFEDDVVLSTSNDLPHECINEGLIDRNPNSKREIRKKYRGGAKKRGKRKVGFKF 156

Query: 121 SFSRNCND----NILFNGGELDVNYSTISSDLSLEDCNAILKRLEKCN-DSKTLGFFEWM 180
           ++ RN  +    ++   GGELDVNYS I  +LSLE CN ILKRLE+C+ D K+L FFEWM
Sbjct: 157 NYKRNGIEQEIEDLFVEGGELDVNYSVIHCNLSLEHCNLILKRLERCSSDDKSLRFFEWM 216

Query: 181 RSNGKLKHNVSAYNLVLRVLGRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSR 240
           R+NGKL+ N++AYN++LRVLGR+EDW  AE++I EV    GS+LDF+VFNTLIYAC +  
Sbjct: 217 RNNGKLEKNLNAYNVILRVLGRREDWGTAERMIGEVSDSFGSELDFRVFNTLIYACSRRG 276

Query: 241 FVEQGTKWFRMMLECQVQPNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYAS 300
            +  G KWFRMMLE  VQPN+ATFGMLMGLYQK  +++E+EF F++MR+FGI+C++AY++
Sbjct: 277 NMLLGGKWFRMMLELGVQPNIATFGMLMGLYQKGWNVEEAEFVFSKMRSFGIICQSAYSA 336

Query: 301 MITIYIRMNLYDKAEEVIQLMQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEAG 360
           MITIY R++LY+KAEE+I LM EDKV  N+ENW+V+LNAY QQG++EEAE V   M+EA 
Sbjct: 337 MITIYTRLSLYNKAEEIIGLMGEDKVAMNVENWLVLLNAYSQQGRLEEAEQVLVEMQEAS 396

Query: 361 FSSNIIAYNTLITGYGKASNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAE 420
           FS NI+A+NTLITGYGK SNM  AQRLFL I+N+G+EPDETTYRSMIEGWGR GNYK AE
Sbjct: 397 FSPNIVAFNTLITGYGKLSNMAAAQRLFLDIQNAGLEPDETTYRSMIEGWGRTGNYKEAE 456

Query: 421 WYYKELKRRGYMPNSSNLFTLINLQAKHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYE 480
           WYYKELKR GYMPNSSNL+TLINLQAKH+D+ G + TL+DMLKIGC+ SSI+G +L+AYE
Sbjct: 457 WYYKELKRLGYMPNSSNLYTLINLQAKHDDDEGAIGTLDDMLKIGCQHSSILGTLLKAYE 516

Query: 481 KARRMKSVPVLLTGSFYRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEEN 540
           KA R+  VP+LL  SFY+ VL +QTSCSILVM YVK+CLVD+ALKVL +K+WKD  FE+N
Sbjct: 517 KAGRINKVPLLLKDSFYQHVLVNQTSCSILVMTYVKNCLVDEALKVLGDKKWKDQTFEDN 576

Query: 541 LYHLLICSCKELGHLENAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSL 600
           LYHLLICSCKELG+LE+A++IYTQ+PK E+KPNLHI+CT+IDIYS++G F++ EKLY  L
Sbjct: 577 LYHLLICSCKELGNLESAVRIYTQMPKSEDKPNLHISCTVIDIYSVLGCFAEAEKLYQQL 636

Query: 601 RSSGIPLDLIAYNVVVRMYVKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGM 660
           + SGI LD++A+++VVRMYVKAGSL+DACSVL  M +Q++I+PDIYL RDMLRIYQ+CGM
Sbjct: 637 KCSGIALDMVAFSIVVRMYVKAGSLKDACSVLATMEKQENIIPDIYLYRDMLRIYQQCGM 696

Query: 661 VHKLADLYYRILKSGVSWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNV 720
           + KL DLY++ILKS V WDQE+YNC+INCC+RALPV ELSRLF EMLQ GF+PNT+T NV
Sbjct: 697 MSKLKDLYHKILKSEVDWDQELYNCIINCCARALPVGELSRLFSEMLQRGFSPNTITFNV 756

Query: 721 MLDVYGKSKLFTKARNLFGLAQKRGLVDAISYNTMISVYGKNKDFKNMSSTVQKMKFNGF 780
           MLDVYGK+KLF KA+ LF +A+KRGLVD ISYNT+I+ YG NKDFKNM+S V+ M+F+GF
Sbjct: 757 MLDVYGKAKLFNKAKELFWMARKRGLVDVISYNTVIAAYGHNKDFKNMASAVRNMQFDGF 816

Query: 781 SVSLEAYNCMLDAYGKECQMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAE 840
           SVSLEAYNCMLD YGKE QME FR+VLQRM+++S   DHYTYNIMINIYGEQGWIDEVA 
Sbjct: 817 SVSLEAYNCMLDGYGKEGQMECFRNVLQRMKQSSYTSDHYTYNIMINIYGEQGWIDEVAG 876

Query: 841 VLTELKACGLEPDLYSYNTLIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQ 893
           VLTEL+ CGL PDL SYNTLIKAYG+AGMVE+A  LVKEMRE  IEPD+ITY N+I ALQ
Sbjct: 877 VLTELRECGLRPDLCSYNTLIKAYGVAGMVEDAIDLVKEMRENGIEPDKITYSNLITALQ 936

[Close]

BLAST of Csa1G257890 vs. TrEMBL
Match: M5VU43_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019391mg PE=4 SV=1)

HSP 1 Score: 1191.4 bits (3081), Expect = 0.0e+00
Identity = 571/764 (74.74%), Postives = 667/764 (87.30%), Query Frame = 1


Query: 129 LEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDWDAAEKLIE 188
           LE CN ILKRLE+C+D KTL FFEWMRSNGKL+ NVSA+NLVLRV+GR+EDWD AEKL++
Sbjct: 1   LEHCNDILKRLERCSDVKTLRFFEWMRSNGKLERNVSAFNLVLRVMGRREDWDGAEKLVQ 60

Query: 189 EVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGMLMGLYQKK 248
           EV A+LG +L++QVFNTLIYAC K   +E G KWFRMMLE +VQPN+ATFGMLM LYQK 
Sbjct: 61  EVIADLGCELNYQVFNTLIYACCKLGRLELGGKWFRMMLEHEVQPNIATFGMLMVLYQKG 120

Query: 249 CDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQEDKVIPNLENWV 308
            +++E+EF F QMRNFGI+C++AY+SMITIY R+NL++KAEE+I L++ED+V  NL+NW+
Sbjct: 121 WNVEEAEFTFFQMRNFGILCQSAYSSMITIYTRLNLFEKAEEIIGLLKEDRVRLNLDNWL 180

Query: 309 VMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQRLFLGIKNS 368
           VM+NAYCQQGK+++AELV  SM+EAGFS NIIAYNTLITGYGKAS MD A  LF GIKN+
Sbjct: 181 VMINAYCQQGKVDDAELVLVSMQEAGFSPNIIAYNTLITGYGKASKMDAADHLFQGIKNA 240

Query: 369 GVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQAKHEDEAGT 428
           G+EPDETTYRSMIEGWGRA NY  AEWYYKELKR GY PNSSNL+TLINLQAKHEDE G 
Sbjct: 241 GLEPDETTYRSMIEGWGRADNYMEAEWYYKELKRLGYKPNSSNLYTLINLQAKHEDEEGA 300

Query: 429 LKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLSSQTSCSILVMAY 488
           ++TL+DML +GC+ SSI+G +LQAYEKA R+  VP LL GSFY+ +L SQTSCSILVMAY
Sbjct: 301 IRTLDDMLTMGCQYSSILGTLLQAYEKAGRVDKVPRLLRGSFYQHILVSQTSCSILVMAY 360

Query: 489 VKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLPKRENKPNL 548
           VKHCLVDD +KVLREK WKD  FE+NLYHLLICSCKELGHLENA+KIY Q+P+ ++KPN+
Sbjct: 361 VKHCLVDDTMKVLREKLWKDPPFEDNLYHLLICSCKELGHLENAVKIYKQMPRYDDKPNM 420

Query: 549 HITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLEDACSVLDL 608
           HI CTMIDIY IMG F++ EK+Y+ L+SSG+ LD+IAY++ VRMYVKAG+LEDACSVLD 
Sbjct: 421 HIMCTMIDIYIIMGLFTEAEKIYVELKSSGVALDMIAYSIAVRMYVKAGALEDACSVLDT 480

Query: 609 MAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCVINCCSRAL 668
           M +Q+ IVPDIY+ RDMLRIYQRCG + KL DLYY++LKSGV+WDQEMYNCVINCCSRAL
Sbjct: 481 MDKQEGIVPDIYMFRDMLRIYQRCGRLDKLKDLYYKLLKSGVTWDQEMYNCVINCCSRAL 540

Query: 669 PVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGLVDAISYNT 728
           PVDE+S +FDEMLQCGF PNT+T NVMLDVYGK+KL  KAR LF +AQK GLVD ISYNT
Sbjct: 541 PVDEISEIFDEMLQCGFVPNTITFNVMLDVYGKAKLLKKARKLFWMAQKWGLVDMISYNT 600

Query: 729 MISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRMQETS 788
           +I+ YG+NKD +NMSST  +M+F GFSVSLEAYN MLDAYGKE QME FRSVLQRM+ETS
Sbjct: 601 IIAAYGRNKDLRNMSSTFGEMQFKGFSVSLEAYNTMLDAYGKESQMERFRSVLQRMKETS 660

Query: 789 SECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTLIKAYGIAGMVEEAA 848
              DHYTYNIMINIYGEQGWIDEVA+VLTELK CGL PDL SYNTLIKAYGIAGMVE+A 
Sbjct: 661 CASDHYTYNIMINIYGEQGWIDEVADVLTELKECGLGPDLCSYNTLIKAYGIAGMVEDAV 720

Query: 849 QLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKWSLWMKQM 893
            LVKEMRE  I+PD+ITYIN+I AL++ND++LEAVKWSLWMKQM
Sbjct: 721 HLVKEMRENGIQPDKITYINLINALRKNDEYLEAVKWSLWMKQM 764

[Close]

BLAST of Csa1G257890 vs. TrEMBL
Match: A0A067L3T5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04067 PE=4 SV=1)

HSP 1 Score: 1184.5 bits (3063), Expect = 0.0e+00
Identity = 586/917 (63.90%), Postives = 728/917 (79.39%), Query Frame = 1


Query: 1   MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV 60
           MASL+L  SL  FDS K +F  N    S Y S FSI++ +   ++ II +++R   P  V
Sbjct: 1   MASLRLPISLDKFDSKKSNFSRNPHQFSTYTSTFSISSCILSTRACIIATVSRF-SPINV 60

Query: 61  SQVEQDASDVSQSRFDEIV------------------ARKKYFTSKKPSKRAAGSHFSFS 120
           S++E + S+   S   ++V                   +KKY   K+  KR  G  F + 
Sbjct: 61  SRLETELSEKVLSTTSDLVHETINEDLVEQNQDLKREIKKKYKGGKRGMKRQEGLKFRYK 120

Query: 121 RNCND----NILFNGGELDVNYSTISSDLSLEDCNAILKRLEKCN---DSKTLGFFEWMR 180
           RN ++    +   +  E DVNYS I S+LSLE CN ILKRLE C+   +SKTL FFEWMR
Sbjct: 121 RNGSEPNIEDFFVHDSEFDVNYSVIKSNLSLEQCNYILKRLEGCSSDSESKTLRFFEWMR 180

Query: 181 SNGKLKHNVSAYNLVLRVLGRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRF 240
           SN KL+ NVSAYN +LRVLGR EDWD+AE++I EV      +LDF++FN+LIY C K   
Sbjct: 181 SNRKLEKNVSAYNTILRVLGRMEDWDSAERMIREVGDRFSDELDFRIFNSLIYVCTKRGH 240

Query: 241 VEQGTKWFRMMLECQVQPNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASM 300
           ++ G KWFRMMLE  VQPN+ATFGMLMGLYQK  +++E+EF F +MR+FGIVC++AY++M
Sbjct: 241 MKFGGKWFRMMLELGVQPNIATFGMLMGLYQKGWNVEEAEFVFAKMRSFGIVCQSAYSAM 300

Query: 301 ITIYIRMNLYDKAEEVIQLMQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGF 360
           ITIY R++LYDKAE+VI LM+EDKV+ NLENW+V+LNAY QQG++EEAE VF +M+EA  
Sbjct: 301 ITIYTRLSLYDKAEQVIGLMREDKVVLNLENWLVLLNAYSQQGRLEEAEQVFVAMQEANL 360

Query: 361 SSNIIAYNTLITGYGKASNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEW 420
           S NI+AYNTLITGYGK+SNM  AQR+F+ I+N G+EPDETTYRSMIEGWGR G+YK AE 
Sbjct: 361 SPNIVAYNTLITGYGKSSNMAAAQRVFVDIQNVGLEPDETTYRSMIEGWGRIGSYKEAEL 420

Query: 421 YYKELKRRGYMPNSSNLFTLINLQAKHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEK 480
           Y+KELKR G+ PNSSNL+TLINLQAKH DE G ++TL DMLKIGC+  SI+G +L+AYEK
Sbjct: 421 YFKELKRLGFKPNSSNLYTLINLQAKHGDEEGAIRTLEDMLKIGCQYPSILGTLLKAYEK 480

Query: 481 ARRMKSVPVLLTGSFYRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENL 540
           A R+  VP+LL GSFY  VL +QTSCS LVMAYVKHCLVDDALKVL +K+W D  FE+NL
Sbjct: 481 AGRINKVPLLLKGSFYHHVLVNQTSCSTLVMAYVKHCLVDDALKVLGDKQWNDPVFEDNL 540

Query: 541 YHLLICSCKELGHLENAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLR 600
           YHLLICSCKELG+LENA+KIYTQ+PK ++K NLHI+CTMIDIY  +G F +G+KLYL ++
Sbjct: 541 YHLLICSCKELGYLENAVKIYTQMPKSDDKLNLHISCTMIDIYGALGLFFEGDKLYLKIK 600

Query: 601 SSGIPLDLIAYNVVVRMYVKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMV 660
           SSGI LD+IAY++VVRMYVKAGSL+ ACSVL+ M +Q+DI+PDIYL RDMLRIYQ+CGM+
Sbjct: 601 SSGISLDMIAYSIVVRMYVKAGSLKAACSVLETMEKQKDIIPDIYLFRDMLRIYQQCGMM 660

Query: 661 HKLADLYYRILKSGVSWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVM 720
            KL DLYY+IL+S V WDQE+YNCVINCC+RA+P+D+LS LF+EML  GF+PNT+T NVM
Sbjct: 661 SKLKDLYYKILRSEVVWDQELYNCVINCCARAVPIDDLSELFNEMLHRGFSPNTITFNVM 720

Query: 721 LDVYGKSKLFTKARNLFGLAQKRGLVDAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFS 780
           LD YGK+KLF KAR LF +A+K+G++D ISYNTMI+ YG ++DFKNM+ST+Q M+F+GFS
Sbjct: 721 LDAYGKAKLFNKARELFMMARKQGMIDVISYNTMIAAYGHDRDFKNMASTIQNMQFDGFS 780

Query: 781 VSLEAYNCMLDAYGKECQMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEV 840
           VSLEAYNCMLDAYGK  QME+F++VLQRM+++S   DHYTYNIMIN+YGEQGWIDEVAEV
Sbjct: 781 VSLEAYNCMLDAYGKRGQMESFKNVLQRMKQSSCTSDHYTYNIMINVYGEQGWIDEVAEV 840

Query: 841 LTELKACGLEPDLYSYNTLIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQR 893
           L ELK  GL P+L SYNTLIKAYGIAGM+EEA  LVKEMR+  IEP++ITY N+I ALQ+
Sbjct: 841 LAELKESGLGPNLCSYNTLIKAYGIAGMIEEAIDLVKEMRKSGIEPNKITYTNLITALQK 900

[Close]

BLAST of Csa1G257890 vs. TrEMBL
Match: V4UR41_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007430mg PE=4 SV=1)

HSP 1 Score: 1182.5 bits (3058), Expect = 0.0e+00
Identity = 575/816 (70.47%), Postives = 687/816 (84.19%), Query Frame = 1


Query: 81  RKKYFTSKKPSKRAAGSHFSFSRNCNDN----ILFNGGELDVNYSTISSDLSLEDCNAIL 140
           +K  +  KK SKR       F R+  +        N GELDVNYS I +DLSL++CNAIL
Sbjct: 32  KKGRYGVKKGSKRDVDMSLRFRRSAREQEREYFFANDGELDVNYSVIGADLSLDECNAIL 91

Query: 141 KRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDWDAAEKLIEEVRAELGS 200
           KRLEK +DSK+L FFEWMR+NGKL+ NV AYNLVLRV  R+EDWDAAEK+I EVR  LG+
Sbjct: 92  KRLEKYSDSKSLKFFEWMRTNGKLEKNVIAYNLVLRVFSRREDWDAAEKMIREVRMSLGT 151

Query: 201 QLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGMLMGLYQKKCDIKESEF 260
           +L+FQ+FNTLIYAC K   VE G KWF MMLEC VQPNVATFGMLMGLY+K   ++E+EF
Sbjct: 152 KLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWSVEEAEF 211

Query: 261 AFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQEDKVIPNLENWVVMLNAYCQ 320
           AFNQMR  G+VCE+AY++MITIY R++LY+KAEEVI+L++EDKV+PNLENW+VMLNAY Q
Sbjct: 212 AFNQMRKLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQ 271

Query: 321 QGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQRLFLGIKNSGVEPDETT 380
           QGK+EEAELV  SM EAGFS NI+AYNTLITGYGK SNMD +QRLFL IK+ G+EPDETT
Sbjct: 272 QGKLEEAELVLVSMREAGFSPNIVAYNTLITGYGKVSNMDASQRLFLSIKDVGLEPDETT 331

Query: 381 YRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQAKHEDEAGTLKTLNDML 440
           YRSMIEGWGRAGNY+ A+WYYKELK  GY PN+SNL+TLINLQAK+EDE G + TL+DML
Sbjct: 332 YRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLQAKYEDEEGAVNTLDDML 391

Query: 441 KIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLSSQTSCSILVMAYVKHCLVDD 500
           K+GC+ SSI+G +LQAYEKA R  +VP +L GS Y+ VL + TSCSILVMAYVKH L+DD
Sbjct: 392 KMGCQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDD 451

Query: 501 ALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLPKRENKPNLHITCTMID 560
           A+KV+ +K WKD  FE+NLYHLLICSCK+ GHL NA+KIY+ +   + KPNLHI CTMID
Sbjct: 452 AMKVMGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMID 511

Query: 561 IYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLEDACSVLDLMAEQQDIV 620
            YS+MG F++ EKLYL+L+SSGI LDLIA+ VVVRMYVKAGSL+DAC+VL+ M +Q+DI 
Sbjct: 512 TYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIE 571

Query: 621 PDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCVINCCSRALPVDELSRL 680
           PD YL  DMLRIYQ+CGM+ KL+ LYY+ILKSG++W+QE+Y+CVINCC+RALP+DELSR+
Sbjct: 572 PDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRV 631

Query: 681 FDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGLVDAISYNTMISVYGKN 740
           FDEMLQ GF PN +TLNVMLD+YGK+KLF + R LF +A+K GLVD ISYNT+I+ YG+N
Sbjct: 632 FDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLVDVISYNTIIAAYGQN 691

Query: 741 KDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRMQETSSECDHYTY 800
           K+ ++MSSTVQ+M+F+GFSVSLEAYN MLDAYGKE QMENF++VL+RM+ETS   DHYTY
Sbjct: 692 KNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTY 751

Query: 801 NIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTLIKAYGIAGMVEEAAQLVKEMRE 860
           NIMI+IYGEQGWI+EV  VLTELK CGL PDL SYNTLIKAYGIAGMVE+A  LVKEMRE
Sbjct: 752 NIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRE 811

Query: 861 KRIEPDRITYINMIRALQRNDQFLEAVKWSLWMKQM 893
             IEPD+ITY NMI ALQRND+FLEA+KWSLWMKQ+
Sbjct: 812 NGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQI 847

[Close]

BLAST of Csa1G257890 vs. TrEMBL
Match: A0A061GWJ7_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein OS=Theobroma cacao GN=TCM_038425 PE=4 SV=1)

HSP 1 Score: 1182.5 bits (3058), Expect = 0.0e+00
Identity = 594/915 (64.92%), Postives = 718/915 (78.47%), Query Frame = 1


Query: 1   MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKS-SIIYSLARVHKPSK 60
           MASLKL  SL + DS K +F +N   + D+CS+FS  + +H+ K+ S + SL R+ K  K
Sbjct: 1   MASLKLPISLDTVDSKKLNFYVNPSHVPDHCSIFSFTSCIHVTKAASNLTSLTRL-KHFK 60

Query: 61  VSQVEQDASDVSQ-----------SRFDEIVARKKYFTS------KKPSKRAAGSHFSFS 120
           VS+ E +  ++ +           S+ D +    K+         KK  ++  G  F F 
Sbjct: 61  VSRFETEFPNIPEPSPVDKDIHFSSKIDLVNENPKFVEGQKGQNPKKGIRKNVGFKFRFR 120

Query: 121 RNCN-----DNILFNGGELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSN 180
           RN N     D  + N   LDV+YS I  +L+L  CN ILKRLE+ NDS  L FFEWMRSN
Sbjct: 121 RNRNEIEREDLFVHNNSGLDVDYSAIKPNLNLPHCNFILKRLERSNDSNALRFFEWMRSN 180

Query: 181 GKLKHNVSAYNLVLRVLGRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVE 240
           GKLK NV+AY LVLRVLGR+EDWDAAE ++ +   + G +L+FQVFNT+IYAC K   VE
Sbjct: 181 GKLKGNVTAYRLVLRVLGRREDWDAAEMMLRQANGDSGCKLNFQVFNTIIYACSKKGLVE 240

Query: 241 QGTKWFRMMLECQVQPNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMIT 300
            G KWFRMMLE   +PNVATFGMLMGLYQK  +  E+EF F+QMRN GIVC++AY++MIT
Sbjct: 241 LGAKWFRMMLEHGFRPNVATFGMLMGLYQKGWNASEAEFTFSQMRNSGIVCQSAYSAMIT 300

Query: 301 IYIRMNLYDKAEEVIQLMQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSS 360
           IY R++LYDKAE++I  M++DKVI NLENW+VMLNAY Q+GK+EEAE V  SM+EAGFS 
Sbjct: 301 IYTRLSLYDKAEDIIGFMRKDKVILNLENWLVMLNAYSQRGKLEEAEQVLVSMQEAGFSP 360

Query: 361 NIIAYNTLITGYGKASNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYY 420
           NI+AYNTLITGYGK+SNMD AQ +FL I+  G+EPDETTYRSMIEGWGRA NYK  +WYY
Sbjct: 361 NIVAYNTLITGYGKSSNMDAAQLVFLSIQQVGLEPDETTYRSMIEGWGRADNYKEVKWYY 420

Query: 421 KELKRRGYMPNSSNLFTLINLQAKHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKAR 480
           KELK+ G+ PNSSNL+TLI LQAKH DE G  KTL+DMLK+ C+ SSI+G VLQAYE+  
Sbjct: 421 KELKQLGFKPNSSNLYTLITLQAKHGDEEGATKTLDDMLKMRCQHSSILGTVLQAYERVG 480

Query: 481 RMKSVPVLLTGSFYRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYH 540
           R+  VP++L GSFY  VL  QTSCSILVMAYVK+ LVD A+KVL  K+WKD  FE+NLYH
Sbjct: 481 RIDKVPLILIGSFYEHVLKDQTSCSILVMAYVKNGLVDYAIKVLGSKKWKDPVFEDNLYH 540

Query: 541 LLICSCKELGHLENAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSS 600
           LLICSCKELG L+NA+KI++Q+P  E KPNLHI CTMIDIYS+MG F++ E LYL L+SS
Sbjct: 541 LLICSCKELGDLDNAVKIFSQMPNAEIKPNLHIMCTMIDIYSVMGHFTEAETLYLKLKSS 600

Query: 601 GIPLDLIAYNVVVRMYVKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHK 660
           G+ LD+I +++VVRMYVKAGSL+DACSVL +M +Q++IVPDIYL RDMLRIYQ+C M  K
Sbjct: 601 GVALDMIGFSIVVRMYVKAGSLKDACSVLQIMEKQKEIVPDIYLFRDMLRIYQKCNMKDK 660

Query: 661 LADLYYRILKSGVSWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLD 720
           LA+LYY+ILKSGV+WDQEMYNCVINCC+RALPVDELS++FD ML  GFAP+T+T NVMLD
Sbjct: 661 LAELYYKILKSGVTWDQEMYNCVINCCARALPVDELSKIFDRMLLHGFAPHTITFNVMLD 720

Query: 721 VYGKSKLFTKARNLFGLAQKRGLVDAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVS 780
           VYGK+KLF K + LF +A+ RGLVD ISYNT+I+ YG+NKD KNMSSTV++M+FNGFSVS
Sbjct: 721 VYGKAKLFKKVKKLFWMAKTRGLVDVISYNTVIAAYGQNKDLKNMSSTVREMQFNGFSVS 780

Query: 781 LEAYNCMLDAYGKECQMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLT 840
           LEAYNCMLD YGK+ QME FRSVLQRM+E++   D YTYNIMINIYGEQ WIDEVA VLT
Sbjct: 781 LEAYNCMLDTYGKDGQMEKFRSVLQRMKESNCALDRYTYNIMINIYGEQRWIDEVAAVLT 840

Query: 841 ELKACGLEPDLYSYNTLIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRND 893
           ELK CGL PDL SYNTLIKAYGIAGMVE+A  L+KEMRE  +EPD ITY N+I AL++ND
Sbjct: 841 ELKECGLGPDLCSYNTLIKAYGIAGMVEDAVGLIKEMRENGVEPDNITYNNLITALRKND 900

[Close]

BLAST of Csa1G257890 vs. TAIR10
Match: AT4G30825.1 (AT4G30825.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 1082.8 bits (2799), Expect = 0.0e+00
Identity = 546/902 (60.53%), Postives = 675/902 (74.83%), Query Frame = 1


Query: 1   MASLKLSFSLHSFDSNK--FDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPS 60
           M SL+ S  L  FDS +  F F  N     D   +  + + +H  ++S I S  RV    
Sbjct: 1   MGSLRFSIPLDPFDSKRKRFHFSANPSQFPDQFPIHFVTSSIHATRASSIGSSTRVLDKI 60

Query: 61  KVSQVEQDASDVSQSRFDEIVARK----KYFTSKKPSKRAAGSHFSFSRNCND----NIL 120
           +VS +  +A++ + +        +    K    ++ +K+     FSF R  ND    N+ 
Sbjct: 61  RVSSLGTEANENAINSASAAPVERSRSSKLSGDQRGTKKYVARKFSFRRGSNDLELENLF 120

Query: 121 FNGGELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLV 180
            N GE+DVNYS I    SLE CN ILKRLE C+D+  + FF+WMR NGKL  N  AY+L+
Sbjct: 121 VNNGEIDVNYSAIKPGQSLEHCNGILKRLESCSDTNAIKFFDWMRCNGKLVGNFVAYSLI 180

Query: 181 LRVLGRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQ 240
           LRVLGR+E+WD AE LI+E+      Q  +QVFNT+IYAC K   V+  +KWF MMLE  
Sbjct: 181 LRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFG 240

Query: 241 VQPNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEE 300
           V+PNVAT GMLMGLYQK  +++E+EFAF+ MR FGIVCE+AY+SMITIY R+ LYDKAEE
Sbjct: 241 VRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTRLRLYDKAEE 300

Query: 301 VIQLMQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYG 360
           VI LM++D+V   LENW+VMLNAY QQGKME AE +  SME AGFS NIIAYNTLITGYG
Sbjct: 301 VIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYG 360

Query: 361 KASNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSS 420
           K   M+ AQ LF  + N G+EPDET+YRSMIEGWGRA NY+ A+ YY+ELKR GY PNS 
Sbjct: 361 KIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSF 420

Query: 421 NLFTLINLQAKHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSF 480
           NLFTLINLQAK+ D  G +KT+ DM  IGC+ SSI+G +LQAYEK  ++  VP +L GSF
Sbjct: 421 NLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSF 480

Query: 481 YRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLE 540
           +  +  +QTS S LVMAYVKH +VDD L +LREK+W+D  FE +LYHLLICSCKE G L 
Sbjct: 481 HNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLT 540

Query: 541 NAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVV 600
           +A+KIY    + + + NLHIT TMIDIY++MG FS+ EKLYL+L+SSG+ LD I +++VV
Sbjct: 541 DAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVV 600

Query: 601 RMYVKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGV 660
           RMYVKAGSLE+ACSVL++M EQ+DIVPD+YL RDMLRIYQ+C +  KL  LYYRI KSG+
Sbjct: 601 RMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGI 660

Query: 661 SWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARN 720
            W+QEMYNCVINCC+RALP+DELS  F+EM++ GF PNTVT NV+LDVYGK+KLF K   
Sbjct: 661 HWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNE 720

Query: 721 LFGLAQKRGLVDAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGK 780
           LF LA++ G+VD ISYNT+I+ YGKNKD+ NMSS ++ M+F+GFSVSLEAYN +LDAYGK
Sbjct: 721 LFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGK 780

Query: 781 ECQMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYS 840
           + QME FRS+L+RM++++S  DHYTYNIMINIYGEQGWIDEVA+VL ELK  GL PDL S
Sbjct: 781 DKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCS 840

Query: 841 YNTLIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKWSLWMK 893
           YNTLIKAYGI GMVEEA  LVKEMR + I PD++TY N++ AL+RND+FLEA+KWSLWMK
Sbjct: 841 YNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMK 900

[Close]

BLAST of Csa1G257890 vs. TAIR10
Match: AT3G06920.1 (AT3G06920.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 194.1 bits (492), Expect = 3.6e-49
Identity = 163/751 (21.70%), Postives = 331/751 (44.07%), Query Frame = 1


Query: 135 ILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDWDAAEKLIEEVR-AE 194
           +L+RL+  N  + + +F W     +L H   +YN +L V+ R  ++DA ++++ E+  A 
Sbjct: 71  VLRRLKDVN--RAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAG 130

Query: 195 LGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGMLMGLYQKKCDIKE 254
            G  ++  +   ++  C K+  + +G    +MM + + +P  + +  L+G +        
Sbjct: 131 FGPSVNTCI--EMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDM 190

Query: 255 SEFAFNQMRNFGIVCET-AYASMITIYIRMNLYDKAEEVIQLMQEDKVIPNLENWVVMLN 314
               F QM+  G       + ++I  + +    D A  ++  M+   +  ++  + V ++
Sbjct: 191 MLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCID 250

Query: 315 AYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQRLFLGIKNSGVEP 374
           ++ + GK++ A   F  +E  G   + + Y ++I    KA+ +D A  +F  ++ +   P
Sbjct: 251 SFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVP 310

Query: 375 DETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQAKHEDEAGTLKTL 434
               Y +MI G+G AG +  A    +  + +G +P+      ++    K       LK  
Sbjct: 311 CTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVF 370

Query: 435 NDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLSSQTSCSILVMAYVKHC 494
            +M K      S    ++    +A ++ +   L        +  +  + +I+V    K  
Sbjct: 371 EEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQ 430

Query: 495 LVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLPKRENKPNLHITC 554
            +D+A  +  E ++K    +E  +  LI    ++G +++A K+Y ++   + + N  +  
Sbjct: 431 KLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYT 490

Query: 555 TMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLEDACSVLDLMAEQ 614
           ++I  +   GR  DG K+Y  + +     DL   N  +    KAG  E   ++ + +  +
Sbjct: 491 SLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKAR 550

Query: 615 QDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCVINCCSRALPVDE 674
           +  VPD      ++    + G  ++  +L+Y + + G   D   YN VI+   +   V++
Sbjct: 551 R-FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNK 610

Query: 675 LSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQ-KRGLVDAISYNTMIS 734
             +L +EM   GF P  VT   ++D   K     +A  LF  A+ KR  ++ + Y+++I 
Sbjct: 611 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 670

Query: 735 VYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRMQETSSEC 794
            +GK          ++++   G + +L  +N +LDA  K  ++       Q M+E     
Sbjct: 671 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 730

Query: 795 DHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTLIKAYGIAGMVEEAAQLV 854
           +  TY I+IN   +    ++      E++  G++P   SY T+I     AG + EA  L 
Sbjct: 731 NQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALF 790

Query: 855 KEMREKRIEPDRITYINMIRALQRNDQFLEA 883
              +     PD   Y  MI  L   ++ ++A
Sbjct: 791 DRFKANGGVPDSACYNAMIEGLSNGNRAMDA 816

[Close]

BLAST of Csa1G257890 vs. TAIR10
Match: AT4G31850.1 (AT4G31850.1 proton gradient regulation 3)

HSP 1 Score: 193.4 bits (490), Expect = 6.2e-49
Identity = 171/745 (22.95%), Postives = 336/745 (45.10%), Query Frame = 1


Query: 139  LEKCNDSKTLG----FFEWMRSNGKLKHNVSAYNLVLRVLGRQEDWDAAEKLIEEVRAEL 198
            L++ +D++ L     F+  M  +G +  +V  + +++  L +  ++  A   ++ +R + 
Sbjct: 335  LDRFSDNRDLDSVKQFWSEMEKDGHVP-DVVTFTILVDALCKAGNFGEAFDTLDVMRDQ- 394

Query: 199  GSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGMLMGLYQKKCDIKES 258
            G   +   +NTLI    +   ++   + F  M    V+P   T+ + +  Y K  D   +
Sbjct: 395  GILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSA 454

Query: 259  EFAFNQMRNFGIVCETAYASMITIYIRMNLYDK-AEEVIQLMQEDKVIPNLENWVVMLNA 318
               F +M+  GI       +     +     D+ A+++   +++  ++P+   + +M+  
Sbjct: 455  LETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKC 514

Query: 319  YCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQRLFLGIKNSGVEPD 378
            Y + G+++EA  + + M E G   ++I  N+LI    KA  +D A ++F+ +K   ++P 
Sbjct: 515  YSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPT 574

Query: 379  ETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQAKHEDEAGTLKTLN 438
              TY +++ G G+ G  + A   ++ + ++G  PN+    TL +   K+++    LK L 
Sbjct: 575  VVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLF 634

Query: 439  DMLKIGCRPSSIVGN-VLQAYEKARRMKSVPVLLTGSFYRKVLSSQTSCSILVMAYVKHC 498
             M+ +GC P     N ++    K  ++K   +       + V     +   L+   VK  
Sbjct: 635  KMMDMGCVPDVFTYNTIIFGLVKNGQVKEA-MCFFHQMKKLVYPDFVTLCTLLPGVVKAS 694

Query: 499  LVDDALKVLREKEWKDHHFEENLY-HLLICSCKELGHLENAIKIYTQLPKRENKPNLHIT 558
            L++DA K++    +       NL+   LI S      ++NA+    +L       +    
Sbjct: 695  LIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSI 754

Query: 559  CTMIDIYSIMGRFSDGEKLYLS--LRSSGIPLDLIAYNVVVRMYVKAGSLEDACSVLDLM 618
               I  YS       G +       +  G+   L  YN+++   ++A  +E A  V  L 
Sbjct: 755  LVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVF-LQ 814

Query: 619  AEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCVINCCSRALP 678
             +    +PD+     +L  Y + G + +L +LY  +       +   +N VI+   +A  
Sbjct: 815  VKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGN 874

Query: 679  VDE-LSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLF-GLAQKRGLVDAISYN 738
            VD+ L   +D M    F+P   T   ++D   KS    +A+ LF G+       +   YN
Sbjct: 875  VDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYN 934

Query: 739  TMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRMQET 798
             +I+ +GK  +     +  ++M   G    L+ Y+ ++D      +++      + ++E+
Sbjct: 935  ILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES 994

Query: 799  SSECDHYTYNIMINIYGEQGWIDEVAEVLTELKAC-GLEPDLYSYNTLIKAYGIAGMVEE 858
                D   YN++IN  G+   ++E   +  E+K   G+ PDLY+YN+LI   GIAGMVEE
Sbjct: 995  GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE 1054

Query: 859  AAQLVKEMREKRIEPDRITYINMIR 872
            A ++  E++   +EP+  T+  +IR
Sbjct: 1055 AGKIYNEIQRAGLEPNVFTFNALIR 1075

HSP 2 Score: 152.9 bits (385), Expect = 9.3e-37
Identity = 161/792 (20.33%), Postives = 346/792 (43.69%), Query Frame = 1


Query: 120 YSTISSDLSL----EDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLG 179
           + +++ +L+L    E CN +L+ L      + + +   +     +K + + Y  + + L 
Sbjct: 105 FKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLS 164

Query: 180 RQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNV 239
            +     A   + ++R E G  L+   +N LI+   KSRF  +  + +R M+    +P++
Sbjct: 165 VKGGLKQAPYALRKMR-EFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSL 224

Query: 240 ATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCET-AYASMITIYIRMNLYDKAEEVIQL 299
            T+  LM    K+ DI        +M   G+      +   I +  R    ++A E+++ 
Sbjct: 225 QTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKR 284

Query: 300 MQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASN 359
           M ++   P++  + V+++A C   K++ A+ VF  M+      + + Y TL+  +    +
Sbjct: 285 MDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRD 344

Query: 360 MDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFT 419
           +D+ ++ +  ++  G  PD  T+  +++   +AGN+  A      ++ +G +PN     T
Sbjct: 345 LDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNT 404

Query: 420 LIN--LQAKHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYR 479
           LI   L+    D+A  L+   +M  +G +P++    V   Y   +   SV  L T   + 
Sbjct: 405 LICGLLRVHRLDDA--LELFGNMESLGVKPTAYTYIVFIDYY-GKSGDSVSALET---FE 464

Query: 480 KVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHF---------EENLYHLLICSC 539
           K+ +   + +I+      + L     K  R++E K   +         +   Y++++   
Sbjct: 465 KMKTKGIAPNIVACNASLYSLA----KAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCY 524

Query: 540 KELGHLENAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDL 599
            ++G ++ AIK+ +++ +   +P++ +  ++I+      R  +  K+++ ++   +   +
Sbjct: 525 SKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTV 584

Query: 600 IAYNVVVRMYVKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYY 659
           + YN ++    K G +++A  + + M  Q+   P+      +     +   V     + +
Sbjct: 585 VTYNTLLAGLGKNGKIQEAIELFEGMV-QKGCPPNTITFNTLFDCLCKNDEVTLALKMLF 644

Query: 660 RILKSGVSWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSK 719
           +++  G   D   YN +I    +   V E    F +M +  + P+ VTL  +L    K+ 
Sbjct: 645 KMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY-PDFVTLCTLLPGVVKAS 704

Query: 720 LFTKA---------------RNLF------GLAQKRGLVDAISYNTMISVYGKNKDFKNM 779
           L   A                NLF       +  + G+ +A+S++  +   G  +D  ++
Sbjct: 705 LIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSI 764

Query: 780 SSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRM-QETSSECDHYTYNIMIN 839
                        V +  Y+C      K   +   R++ ++  ++   +    TYN++I 
Sbjct: 765 L------------VPIIRYSC------KHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIG 824

Query: 840 IYGEQGWIDEVAEVLTELKACGLEPDLYSYNTLIKAYGIAGMVEEAAQLVKEMREKRIEP 874
              E   I+   +V  ++K+ G  PD+ +YN L+ AYG +G ++E  +L KEM     E 
Sbjct: 825 GLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEA 865

HSP 3 Score: 141.4 bits (355), Expect = 2.8e-33
Identity = 150/760 (19.74%), Postives = 320/760 (42.11%), Query Frame = 1


Query: 128 SLEDCNAILKRLEKCND-SKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDWDAAEKL 187
           SL+  ++++  L K  D    +G  + M + G LK NV  + + +RVLGR    + A ++
Sbjct: 222 SLQTYSSLMVGLGKRRDIDSVMGLLKEMETLG-LKPNVYTFTICIRVLGRAGKINEAYEI 281

Query: 188 IEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGMLMGLYQ 247
           ++ +  E G   D   +  LI A   +R ++   + F  M   + +P+  T+  L+  + 
Sbjct: 282 LKRMDDE-GCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFS 341

Query: 248 KKCDIKESEFAFNQMRNFGIVCETA-YASMITIYIRMNLYDKAEEVIQLMQEDKVIPNLE 307
              D+   +  +++M   G V +   +  ++    +   + +A + + +M++  ++PNL 
Sbjct: 342 DNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLH 401

Query: 308 NWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQRLFLGI 367
            +  ++    +  ++++A  +F +ME  G       Y   I  YGK+ +  +A   F  +
Sbjct: 402 TYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKM 461

Query: 368 KNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQAKHEDE 427
           K  G+ P+     + +    +AG  + A+  +  LK  G +P+S     ++   +K  + 
Sbjct: 462 KTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEI 521

Query: 428 AGTLKTLNDMLKIGCRPSSIVGN-VLQAYEKARRMKSVPVLLTGSFYRKVLSSQTSCSIL 487
              +K L++M++ GC P  IV N ++    KA R+     +       K+  +  + + L
Sbjct: 522 DEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTL 581

Query: 488 VMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLI-CSCKELGHLENAIKIYTQLPKRE 547
           +    K+  + +A+++      K        ++ L  C CK    +  A+K+  ++    
Sbjct: 582 LAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKN-DEVTLALKMLFKMMDMG 641

Query: 548 NKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLEDAC 607
             P++    T+I      G+  +    +  ++    P D +    ++   VKA  +EDA 
Sbjct: 642 CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYP-DFVTLCTLLPGVVKASLIEDAY 701

Query: 608 SVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEM------- 667
            ++          P      D++        +        R++ +G+  D +        
Sbjct: 702 KIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIR 761

Query: 668 YNCVINCCSRALPVDELSRLFDEMLQ-CGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLA 727
           Y+C  N  S A        LF++  +  G  P   T N+++    ++ +   A+++F   
Sbjct: 762 YSCKHNNVSGA------RTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQV 821

Query: 728 QKRGLV-DAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQM 787
           +  G + D  +YN ++  YGK+     +    ++M  +    +   +N ++    K   +
Sbjct: 822 KSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNV 881

Query: 788 ENFRSVL-QRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNT 847
           ++   +    M +        TY  +I+   + G + E  ++   +   G  P+   YN 
Sbjct: 882 DDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNI 941

Query: 848 LIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRAL 874
           LI  +G AG  + A  L K M ++ + PD  TY  ++  L
Sbjct: 942 LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCL 971

HSP 4 Score: 75.5 bits (184), Expect = 1.9e-13
Identity = 56/264 (21.21%), Postives = 125/264 (47.35%), Query Frame = 1


Query: 156  SNGKLKHNVSAYNLVLRVLGRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRF 215
            S  + + N   +N+V+  L +  + D A  L  ++ ++         +  LI    KS  
Sbjct: 847  STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 906

Query: 216  VEQGTKWFRMMLECQVQPNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCET-AYAS 275
            + +  + F  ML+   +PN A + +L+  + K  +   +   F +M   G+  +   Y+ 
Sbjct: 907  LYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSV 966

Query: 276  MITIYIRMNLYDKAEEVIQLMQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEA- 335
            ++     +   D+     + ++E  + P++  + +++N   +  ++EEA ++F  M+ + 
Sbjct: 967  LVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSR 1026

Query: 336  GFSSNIIAYNTLITGYGKASNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMA 395
            G + ++  YN+LI   G A  ++ A +++  I+ +G+EP+  T+ ++I G+  +G  + A
Sbjct: 1027 GITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHA 1086

Query: 396  EWYYKELKRRGYMPNSSNLFTLIN 418
               Y+ +   G+ PN+     L N
Sbjct: 1087 YAVYQTMVTGGFSPNTGTYEQLPN 1110

[Close]

BLAST of Csa1G257890 vs. TAIR10
Match: AT5G02860.1 (AT5G02860.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 189.9 bits (481), Expect = 6.8e-48
Identity = 138/589 (23.43%), Postives = 266/589 (45.16%), Query Frame = 1


Query: 304 LENWVV--MLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQRL 363
           L+N VV  +++   ++G++  A  +F  ++E GFS ++ +Y +LI+ +  +     A  +
Sbjct: 171 LDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNV 230

Query: 364 FLGIKNSGVEPDETTYRSMIEGWGRAGN-YKMAEWYYKELKRRGYMPNSSNLFTLINLQA 423
           F  ++  G +P   TY  ++  +G+ G  +       +++K  G  P++    TLI    
Sbjct: 231 FKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCK 290

Query: 424 KHEDEAGTLKTLNDMLKIGCRPSSIVGN-VLQAYEKARRMKSVPVLLTGSFYRKVLSSQT 483
           +        +   +M   G     +  N +L  Y K+ R K    +L          S  
Sbjct: 291 RGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIV 350

Query: 484 SCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQL 543
           + + L+ AY +  ++D+A+++  +   K    +   Y  L+   +  G +E+A+ I+ ++
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410

Query: 544 PKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSL 603
                KPN+      I +Y   G+F++  K++  +   G+  D++ +N ++ ++ + G  
Sbjct: 411 RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMD 470

Query: 604 EDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNC 663
            +   V   M ++   VP+      ++  Y RCG   +   +Y R+L +GV+ D   YN 
Sbjct: 471 SEVSGVFKEM-KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNT 530

Query: 664 VINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSK----LFTKARNLF-GL 723
           V+   +R    ++  ++  EM      PN +T   +L  Y   K    + + A  ++ G+
Sbjct: 531 VLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV 590

Query: 724 AQKRGLVDAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQM 783
            + R    A+   T++ V  K            ++K  GFS  +   N M+  YG+   +
Sbjct: 591 IEPR----AVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMV 650

Query: 784 ENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTL 843
                VL  M+E        TYN ++ ++       +  E+L E+ A G++PD+ SYNT+
Sbjct: 651 AKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTV 710

Query: 844 IKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAV 884
           I AY     + +A+++  EMR   I PD ITY   I +   +  F EA+
Sbjct: 711 IYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAI 754

HSP 2 Score: 178.3 bits (451), Expect = 2.1e-44
Identity = 144/646 (22.29%), Postives = 285/646 (44.12%), Query Frame = 1


Query: 222 WFRMMLECQVQPNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCET-AYASMITIYI 281
           WF    + Q   + +   +++ +  K+  +  +   FN ++  G   +  +Y S+I+ + 
Sbjct: 160 WFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFA 219

Query: 282 RMNLYDKAEEVIQLMQEDKVIPNLENWVVMLNAYCQQGK-MEEAELVFASMEEAGFSSNI 341
               Y +A  V + M+ED   P L  + V+LN + + G    +   +   M+  G + + 
Sbjct: 220 NSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDA 279

Query: 342 IAYNTLITGYGKASNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKE 401
             YNTLIT   + S    A ++F  +K +G   D+ TY ++++ +G++   K A     E
Sbjct: 280 YTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNE 339

Query: 402 LKRRGYMPNSSNLFTLINLQAKHE--DEAGTLKTLNDMLKIGCRPSSIV-GNVLQAYEKA 461
           +   G+ P+     +LI+  A+    DEA  LK  N M + G +P       +L  +E+A
Sbjct: 340 MVLNGFSPSIVTYNSLISAYARDGMLDEAMELK--NQMAEKGTKPDVFTYTTLLSGFERA 399

Query: 462 RRMKSVPVLLTGSFYRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLY 521
            +++S   +           +  + +  +  Y       + +K+  E        +   +
Sbjct: 400 GKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTW 459

Query: 522 HLLICSCKELGHLENAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRS 581
           + L+    + G       ++ ++ +    P      T+I  YS  G F     +Y  +  
Sbjct: 460 NTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLD 519

Query: 582 SGIPLDLIAYNVVVRMYVKAGSLEDACSVLDLMAEQQD--IVPDIYLLRDMLRIY---QR 641
           +G+  DL  YN V+    + G  E +  VL   AE +D    P+      +L  Y   + 
Sbjct: 520 AGVTPDLSTYNTVLAALARGGMWEQSEKVL---AEMEDGRCKPNELTYCSLLHAYANGKE 579

Query: 642 CGMVHKLADLYYRILKSGVSWDQE-MYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTV 701
            G++H LA+  Y    SGV   +  +   ++  CS+   + E  R F E+ + GF+P+  
Sbjct: 580 IGLMHSLAEEVY----SGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDIT 639

Query: 702 TLNVMLDVYGKSKLFTKARNLFGLAQKRGLVDAI-SYNTMISVYGKNKDFKNMSSTVQKM 761
           TLN M+ +YG+ ++  KA  +    ++RG   ++ +YN+++ ++ ++ DF      ++++
Sbjct: 640 TLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREI 699

Query: 762 KFNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWI 821
              G    + +YN ++ AY +  +M +   +   M+ +    D  TYN  I  Y      
Sbjct: 700 LAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMF 759

Query: 822 DEVAEVLTELKACGLEPDLYSYNTLIKAYGIAGMVEEAAQLVKEMR 856
           +E   V+  +   G  P+  +YN+++  Y      +EA   V+++R
Sbjct: 760 EEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796

HSP 3 Score: 144.1 bits (362), Expect = 4.3e-34
Identity = 140/715 (19.58%), Postives = 294/715 (41.12%), Query Frame = 1


Query: 116 LDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLG 175
           ++ N+ +   D  L +     K   +   S+ L F + +  + K       ++L LR   
Sbjct: 107 IEPNFDSGQLDSVLSELFEPFKDKPESTSSELLAFLKGLGFHKK-------FDLALRAF- 166

Query: 176 RQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNV 235
              DW   +K       +  S LD  V   +I    K   V      F  + E     +V
Sbjct: 167 ---DWFMKQK-------DYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDV 226

Query: 236 ATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETA---YASMITIYIRMNL-YDKAEEV 295
            ++  L+  +      +E+   F +M   G  C+     Y  ++ ++ +M   ++K   +
Sbjct: 227 YSYTSLISAFANSGRYREAVNVFKKMEEDG--CKPTLITYNVILNVFGKMGTPWNKITSL 286

Query: 296 IQLMQEDKVIPNLENWVVMLNAYCQQGKM-EEAELVFASMEEAGFSSNIIAYNTLITGYG 355
           ++ M+ D + P+   +  ++   C++G + +EA  VF  M+ AGFS + + YN L+  YG
Sbjct: 287 VEKMKSDGIAPDAYTYNTLITC-CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYG 346

Query: 356 KASNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSS 415
           K+     A ++   +  +G  P   TY S+I  + R G    A     ++  +G  P+  
Sbjct: 347 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 406

Query: 416 NLFTLINLQAKHEDEAGTLKTLNDMLKIGCRPSSIVGNV-LQAYEKARRMKSVPVLLTGS 475
              TL++   +       +    +M   GC+P+    N  ++ Y    +   +  +    
Sbjct: 407 TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 466

Query: 476 FYRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHL 535
               +     + + L+  + ++ +  +   V +E +      E   ++ LI +    G  
Sbjct: 467 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 526

Query: 536 ENAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVV 595
           E A+ +Y ++      P+L    T++   +  G +   EK+   +       + + Y  +
Sbjct: 527 EQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL 586

Query: 596 VRMYVKAGSLEDACSVLDLMAEQ---QDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRIL 655
           +  Y     +     ++  +AE+     I P   LL+ ++ +  +C ++ +    +  + 
Sbjct: 587 LHAYANGKEI----GLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELK 646

Query: 656 KSGVSWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFT 715
           + G S D    N +++   R   V + + + D M + GF P+  T N ++ ++ +S  F 
Sbjct: 647 ERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFG 706

Query: 716 KARNLFGLAQKRGL-VDAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCML 775
           K+  +      +G+  D ISYNT+I  Y +N   ++ S    +M+ +G    +  YN  +
Sbjct: 707 KSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFI 766

Query: 776 DAYGKECQMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELK 821
            +Y  +   E    V++ M +     +  TYN +++ Y +    DE    + +L+
Sbjct: 767 GSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796

[Close]

BLAST of Csa1G257890 vs. TAIR10
Match: AT4G19440.1 (AT4G19440.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 169.9 bits (429), Expect = 7.3e-42
Identity = 137/577 (23.74%), Postives = 257/577 (44.54%), Query Frame = 1


Query: 275 MITIYIRMNLYDKAEEVIQLMQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEAG 334
           ++T  +R N + K  E   ++ +  V P++  +   +NA+C+ GK+EEA  +F+ MEEAG
Sbjct: 232 LLTSLVRANEFQKCCEAFDVVCKG-VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG 291

Query: 335 FSSNIIAYNTLITGYGKASNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAE 394
            + N++ +NT+I G G     D A      +   G+EP   TY  +++G  RA     A 
Sbjct: 292 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 351

Query: 395 WYYKELKRRGYMPNSSNLFTLIN--LQAKHEDEAGTLKTLNDMLKIGCR-PSSIVGNVLQ 454
           +  KE+ ++G+ PN      LI+  ++A   ++A  +K L  M+  G    SS    +++
Sbjct: 352 FVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDL--MVSKGLSLTSSTYNTLIK 411

Query: 455 AYEKARRMKSVPVLLTGSFYRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHF 514
            Y K  +  +   LL          +Q S + ++     H + D AL+ + E   ++   
Sbjct: 412 GYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSP 471

Query: 515 EENLYHLLICSCKELGHLENAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLY 574
              L   LI    + G    A++++ Q   +    +   +  ++      G+  +  ++ 
Sbjct: 472 GGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQ 531

Query: 575 LSLRSSGIPLDLIAYNVVVRMYVKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQR 634
             +   G  +D ++YN ++        L++A   LD M  ++ + PD Y    ++     
Sbjct: 532 KEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV-KRGLKPDNYTYSILICGLFN 591

Query: 635 CGMVHKLADLYYRILKSGVSWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVT 694
              V +    +    ++G+  D   Y+ +I+ C +A   +E    FDEM+     PNTV 
Sbjct: 592 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 651

Query: 695 LNVMLDVYGKSKLFTKARNLFGLAQKRGL-VDAISYNTMISVYGKNKDFKNMSSTVQKMK 754
            N ++  Y +S   + A  L    + +G+  ++ +Y ++I         +      ++M+
Sbjct: 652 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 711

Query: 755 FNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWID 814
             G   ++  Y  ++D YGK  QM     +L+ M   +   +  TY +MI  Y   G + 
Sbjct: 712 MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVT 771

Query: 815 EVAEVLTELKACGLEPDLYSYNTLIKAYGIAGMVEEA 848
           E + +L E++  G+ PD  +Y   I  Y   G V EA
Sbjct: 772 EASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804

HSP 2 Score: 116.3 bits (290), Expect = 9.6e-26
Identity = 125/546 (22.89%), Postives = 225/546 (41.21%), Query Frame = 1


Query: 195 GSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGMLM-GLYQKKCDIKE 254
           G   D  +F T I A  K   VE+  K F  M E  V PNV TF  ++ GL    C   +
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGM--CGRYD 314

Query: 255 SEFAFNQ-MRNFGIVCET-AYASMITIYIRMNLYDKAEEVIQLMQEDKVIPNLENWVVML 314
             F F + M   G+      Y+ ++    R      A  V++ M +    PN+  +  ++
Sbjct: 315 EAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI 374

Query: 315 NAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQRLFLGIKNSGVE 374
           +++ + G + +A  +   M   G S     YNTLI GY K    D A+RL   + + G  
Sbjct: 375 DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 434

Query: 375 PDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQAKHEDEAGTLKT 434
            ++ ++ S+I        +  A  +  E+  R   P    L TLI+   KH   +  L+ 
Sbjct: 435 VNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 494

Query: 435 LNDMLKIGCRPSSIVGN-VLQAYEKARRMKSVPVLLTGSFYRKVLSSQTSCSILVMAYVK 494
               L  G    +   N +L    +A ++     +      R  +  + S + L+     
Sbjct: 495 WFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG 554

Query: 495 HCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLPKRENKPNLHI 554
              +D+A   L E   +    +   Y +LIC    +  +E AI+ +    +    P+++ 
Sbjct: 555 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 614

Query: 555 TCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLEDACSVLDLMA 614
              MID      R  +G++ +  + S  +  + + YN ++R Y ++G L  A  + + M 
Sbjct: 615 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM- 674

Query: 615 EQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCVINCCSRALPV 674
           + + I P+      +++       V +   L+  +   G+  +   Y  +I+   +   +
Sbjct: 675 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQM 734

Query: 675 DELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGLV-DAISYNTM 734
            ++  L  EM      PN +T  VM+  Y +    T+A  L    +++G+V D+I+Y   
Sbjct: 735 VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEF 794

Query: 735 ISVYGK 736
           I  Y K
Sbjct: 795 IYGYLK 797

HSP 3 Score: 73.6 bits (179), Expect = 7.1e-13
Identity = 56/249 (22.49%), Postives = 109/249 (43.78%), Query Frame = 1


Query: 643 YRILKSGVSWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKS 702
           + ++  GVS D  ++   IN   +   V+E  +LF +M + G APN VT N ++D  G  
Sbjct: 249 FDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMC 308

Query: 703 KLFTKARNLFGLAQKRGLVDA-ISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAY 762
             + +A        +RG+    I+Y+ ++    + K   +    +++M   GF  ++  Y
Sbjct: 309 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 368

Query: 763 NCMLDAYGKECQMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKA 822
           N ++D++ +   +     +   M          TYN +I  Y + G  D    +L E+ +
Sbjct: 369 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428

Query: 823 CGLEPDLYSYNTLIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLE 882
            G   +  S+ ++I       M + A + V EM  + + P       +I  L ++ +  +
Sbjct: 429 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 488

Query: 883 AVKWSLWMK 891
           A++  LW +
Sbjct: 489 ALE--LWFQ 495

HSP 4 Score: 67.8 bits (164), Expect = 3.9e-11
Identity = 69/344 (20.06%), Postives = 144/344 (41.86%), Query Frame = 1


Query: 546 PNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLEDACSV 605
           P++++  T I+ +   G+  +  KL+  +  +G+  +++ +N V+      G  ++A   
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 317

Query: 606 LDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYY---RILKSGVSWDQEMYNCVIN 665
            + M E+  + P +     +++   R     ++ D Y+    + K G   +  +YN +I+
Sbjct: 318 KEKMVER-GMEPTLITYSILVKGLTRA---KRIGDAYFVLKEMTKKGFPPNVIVYNNLID 377

Query: 666 CCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGL-V 725
               A  +++   + D M+  G +  + T N ++  Y K+     A  L       G  V
Sbjct: 378 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 437

Query: 726 DAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSVL 785
           +  S+ ++I +   +  F +    V +M     S        ++    K  +      + 
Sbjct: 438 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 497

Query: 786 QRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTLIKAYGIA 845
            +        D  T N +++   E G +DE   +  E+   G   D  SYNTLI      
Sbjct: 498 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 557

Query: 846 GMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKW 886
             ++EA   + EM ++ ++PD  TY  +I  L   ++  EA+++
Sbjct: 558 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQF 597

HSP 5 Score: 63.5 bits (153), Expect = 7.4e-10
Identity = 84/416 (20.19%), Postives = 172/416 (41.35%), Query Frame = 1


Query: 503 EKEWKDHHFEENLYHLLIC------SCKELGHLENAIKIYTQLPKRENKPNLHITCTMID 562
           E+   D H  E L  +L         CK+L  + + ++     P+  +K N     T +D
Sbjct: 55  EETSSDRHLHERLSSVLSKRSLDYEQCKQLITVLSPLEFDRLFPEFRSKVNPK---TALD 114

Query: 563 IYSIMGRFSDGEKLYLSLRSSGIPLDLI--------AYNVVVRMY------VKAGSLEDA 622
            + +    SD      SLRS  + + L+        A  V++R+       +  G  +  
Sbjct: 115 FFRLA---SDSFSFSFSLRSYCLLIGLLLDANLLSAARVVLIRLINGNVPVLPCGLRDSR 174

Query: 623 CSVLDLMA------------EQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGV 682
            ++ D MA            +  D++ ++Y  +     ++R G    L D++  +   G+
Sbjct: 175 VAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQ-----FKRDGCYLAL-DVFPVLANKGM 234

Query: 683 SWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARN 742
              +   N ++    RA    +    FD + + G +P+       ++ + K     +A  
Sbjct: 235 FPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEAVK 294

Query: 743 LFGLAQKRGLV-DAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYG 802
           LF   ++ G+  + +++NT+I   G    +       +KM   G   +L  Y+ ++    
Sbjct: 295 LFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLT 354

Query: 803 KECQMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLY 862
           +  ++ +   VL+ M +     +   YN +I+ + E G +++  E+   + + GL     
Sbjct: 355 RAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSS 414

Query: 863 SYNTLIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKW 886
           +YNTLIK Y   G  + A +L+KEM       ++ ++ ++I  L  +  F  A+++
Sbjct: 415 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 457

[Close]

BLAST of Csa1G257890 vs. NCBI nr
Match: gi|449457967|ref|XP_004146719.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Cucumis sativus])

HSP 1 Score: 1800.4 bits (4662), Expect = 0.0e+00
Identity = 894/894 (100.00%), Postives = 894/894 (100.00%), Query Frame = 1


Query: 1   MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV 60
           MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV
Sbjct: 1   MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV 60

Query: 61  SQVEQDASDVSQSRFDEIVARKKYFTSKKPSKRAAGSHFSFSRNCNDNILFNGGELDVNY 120
           SQVEQDASDVSQSRFDEIVARKKYFTSKKPSKRAAGSHFSFSRNCNDNILFNGGELDVNY
Sbjct: 61  SQVEQDASDVSQSRFDEIVARKKYFTSKKPSKRAAGSHFSFSRNCNDNILFNGGELDVNY 120

Query: 121 STISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDW 180
           STISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDW
Sbjct: 121 STISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDW 180

Query: 181 DAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGM 240
           DAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGM
Sbjct: 181 DAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGM 240

Query: 241 LMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQEDKV 300
           LMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQEDKV
Sbjct: 241 LMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQEDKV 300

Query: 301 IPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQR 360
           IPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQR
Sbjct: 301 IPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQR 360

Query: 361 LFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQA 420
           LFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQA
Sbjct: 361 LFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQA 420

Query: 421 KHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLSSQTS 480
           KHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLSSQTS
Sbjct: 421 KHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLSSQTS 480

Query: 481 CSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLP 540
           CSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLP
Sbjct: 481 CSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLP 540

Query: 541 KRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLE 600
           KRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLE
Sbjct: 541 KRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLE 600

Query: 601 DACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCV 660
           DACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCV
Sbjct: 601 DACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCV 660

Query: 661 INCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGL 720
           INCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGL
Sbjct: 661 INCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGL 720

Query: 721 VDAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSV 780
           VDAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSV
Sbjct: 721 VDAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSV 780

Query: 781 LQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTLIKAYGI 840
           LQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTLIKAYGI
Sbjct: 781 LQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTLIKAYGI 840

Query: 841 AGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKWSLWMKQMKY 895
           AGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKWSLWMKQMKY
Sbjct: 841 AGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKWSLWMKQMKY 894

[Close]

BLAST of Csa1G257890 vs. NCBI nr
Match: gi|659086251|ref|XP_008443835.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Cucumis melo])

HSP 1 Score: 1721.8 bits (4458), Expect = 0.0e+00
Identity = 851/898 (94.77%), Postives = 877/898 (97.66%), Query Frame = 1


Query: 1   MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV 60
           MASLKLSFSLHSFDSNKFDFP+NSP LSDYCSLFSIN ++HLNKS I+YSLARVHKPSKV
Sbjct: 1   MASLKLSFSLHSFDSNKFDFPVNSPPLSDYCSLFSINGYIHLNKSCILYSLARVHKPSKV 60

Query: 61  SQVEQDASDVSQSRFDEIVARKKYFTSKKPSKRAAGSHFSFSRNCND----NILFNGGEL 120
           SQVE +ASDVSQSRFD+I +RKKYFT+KKPSKRAAGSHFSFSRNC++    NILF+GGEL
Sbjct: 61  SQVEPEASDVSQSRFDDIDSRKKYFTAKKPSKRAAGSHFSFSRNCSEKIFENILFSGGEL 120

Query: 121 DVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGR 180
           DVNYSTISSDLSLE CNAILKRLEKCNDSKTL FFEWMRSNGKLKHNVSAYNLVLRVLGR
Sbjct: 121 DVNYSTISSDLSLEGCNAILKRLEKCNDSKTLDFFEWMRSNGKLKHNVSAYNLVLRVLGR 180

Query: 181 QEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVA 240
           QEDWDAAEKLI+EVRAELGSQLDFQVFNTLIYACYKS FVE GTKWFRMMLECQVQPNVA
Sbjct: 181 QEDWDAAEKLIKEVRAELGSQLDFQVFNTLIYACYKSGFVEWGTKWFRMMLECQVQPNVA 240

Query: 241 TFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQ 300
           TFGMLMGLYQK CDI+ESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQ
Sbjct: 241 TFGMLMGLYQKSCDIEESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQ 300

Query: 301 EDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMD 360
           +DKVIPNLENW+VMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMD
Sbjct: 301 KDKVIPNLENWLVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMD 360

Query: 361 TAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLI 420
           TAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKR+GYMPNSSNLFTLI
Sbjct: 361 TAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRKGYMPNSSNLFTLI 420

Query: 421 NLQAKHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLS 480
           NLQAKHEDEAG LKTLNDMLKIGCRPSSIVGNVLQAYEKARR+KSVPVLLTGSFYRKVLS
Sbjct: 421 NLQAKHEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYEKARRIKSVPVLLTGSFYRKVLS 480

Query: 481 SQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIY 540
           SQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGH E+AIKIY
Sbjct: 481 SQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHFESAIKIY 540

Query: 541 TQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKA 600
            Q PKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKA
Sbjct: 541 AQRPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKA 600

Query: 601 GSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEM 660
           GSLEDACSVLDLMAEQQDIVPD+YLLRDMLRIYQRCGMVHKL+DLYYRILKSGVSWDQEM
Sbjct: 601 GSLEDACSVLDLMAEQQDIVPDVYLLRDMLRIYQRCGMVHKLSDLYYRILKSGVSWDQEM 660

Query: 661 YNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQ 720
           YNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLF KARNLFG AQ
Sbjct: 661 YNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFAKARNLFGFAQ 720

Query: 721 KRGLVDAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMEN 780
           KRGLVDAISYNTMISVYGKNKDFKNMSSTVQ+MKFNGFSVSLEAYNCMLDAYGKECQMEN
Sbjct: 721 KRGLVDAISYNTMISVYGKNKDFKNMSSTVQQMKFNGFSVSLEAYNCMLDAYGKECQMEN 780

Query: 781 FRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTLIK 840
           FRSVLQRMQE++SECDHYTYNIMINIYGE+GWIDEVAEVLTELKACGLEPDLYSYNTLIK
Sbjct: 781 FRSVLQRMQESTSECDHYTYNIMINIYGERGWIDEVAEVLTELKACGLEPDLYSYNTLIK 840

Query: 841 AYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKWSLWMKQMKY 895
           AYGIAGMVEEAA+LVKEMREK IEPDRITYINMIRALQRNDQFLEA+KWSLWMKQMKY
Sbjct: 841 AYGIAGMVEEAARLVKEMREKGIEPDRITYINMIRALQRNDQFLEAIKWSLWMKQMKY 898

[Close]

BLAST of Csa1G257890 vs. NCBI nr
Match: gi|645275895|ref|XP_008243032.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Prunus mume])

HSP 1 Score: 1225.7 bits (3170), Expect = 0.0e+00
Identity = 609/907 (67.14%), Postives = 732/907 (80.71%), Query Frame = 1


Query: 1   MASLKLSFSLHSFDSNK-FDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSK 60
           M SL+ S SL +FDS+K F+F   + L   + S  S+  +     S   + L+ + + ++
Sbjct: 1   MTSLRFSVSLETFDSSKKFNFSAVNSLCYSHVSRASV-VNSSNRVSGFKFELSSISELNQ 60

Query: 61  VSQVEQDASDVSQSRFDEIVARKKYFTSKKPSKRAAGSHFSFSRNCN------------- 120
           +S+    +   +++R DE +A +     +   K + G      R  +             
Sbjct: 61  MSEETTLSLSSNKNRVDESLAEQNLDFRQASVKGSRGPKNEVKREKDLKSSSRKSRWVRE 120

Query: 121 -DNILFNGGELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVS 180
            +N+  N GELDV+YS I SDLSLE CN ILKRLEKC+D KTL FFEWMRSNGKL+ NVS
Sbjct: 121 LENLFVNDGELDVDYSVIGSDLSLEHCNDILKRLEKCSDVKTLRFFEWMRSNGKLERNVS 180

Query: 181 AYNLVLRVLGRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRM 240
           A+NLVLRV+GR+EDWD AEKL++EV A+LG +L++QVFNTLIYAC K   +E G KWFRM
Sbjct: 181 AFNLVLRVMGRREDWDGAEKLVQEVIADLGCELNYQVFNTLIYACCKLGRLELGGKWFRM 240

Query: 241 MLECQVQPNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLY 300
           MLE  VQPN+ATFGMLM LYQK   ++E+EF F QMRNFGI+C++AY+SMITIY R+NL+
Sbjct: 241 MLEHGVQPNIATFGMLMVLYQKGWSVEEAEFTFFQMRNFGILCQSAYSSMITIYTRLNLF 300

Query: 301 DKAEEVIQLMQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTL 360
           +KAEE+I L++ED+V  NL+NW+VM+NAYCQQGK+++AELV  SM+EAGFS NIIAYNTL
Sbjct: 301 EKAEEIIGLLKEDRVRLNLDNWLVMINAYCQQGKVDDAELVLVSMQEAGFSPNIIAYNTL 360

Query: 361 ITGYGKASNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGY 420
           ITGYGKAS MD A  LF GIKN+G+EPDETTYRSMIEGWGRA NYK AEWYYKELKR GY
Sbjct: 361 ITGYGKASKMDAADHLFQGIKNAGLEPDETTYRSMIEGWGRADNYKEAEWYYKELKRLGY 420

Query: 421 MPNSSNLFTLINLQAKHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVL 480
            PNSSNL+TLINLQAKHEDE G ++TL+DML +GC+ SSI+G +LQAYEKA R+  VP L
Sbjct: 421 KPNSSNLYTLINLQAKHEDEEGAIRTLDDMLTMGCQYSSILGTLLQAYEKAGRVDKVPRL 480

Query: 481 LTGSFYRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKE 540
           L GSFY+ +L SQTSCSILVMAYVKHCLVDD +KV+REK WKD  FE+NLYHLLICSCKE
Sbjct: 481 LRGSFYQHILVSQTSCSILVMAYVKHCLVDDTMKVVREKLWKDPPFEDNLYHLLICSCKE 540

Query: 541 LGHLENAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIA 600
           LGHLENA+KIY Q+P+ ++KPN+HI CTMIDIY IMG F++ EK+Y+ L+SSG+ LD+IA
Sbjct: 541 LGHLENAVKIYKQMPRYDDKPNMHIMCTMIDIYIIMGLFTEAEKIYVELKSSGVTLDMIA 600

Query: 601 YNVVVRMYVKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRI 660
           Y++ VRMYVKAG+L+DACSVLD M +Q+ IVPDIY+ RDMLRIYQRCG + KL DLYY++
Sbjct: 601 YSIAVRMYVKAGALKDACSVLDTMDKQEGIVPDIYMFRDMLRIYQRCGRLDKLKDLYYKL 660

Query: 661 LKSGVSWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLF 720
           LKSGV+WDQEMYNCVINCCSRALPVDE+S +FDEMLQ GF PNT+T NVMLDVYGK+KL 
Sbjct: 661 LKSGVTWDQEMYNCVINCCSRALPVDEISEIFDEMLQRGFVPNTITFNVMLDVYGKAKLL 720

Query: 721 TKARNLFGLAQKRGLVDAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCML 780
            KAR LF +AQK GLVD ISYNT+I+ YG+NKD +NMSST  +M+F GFSVSLEAYN ML
Sbjct: 721 KKARKLFWMAQKWGLVDMISYNTIIAAYGRNKDLRNMSSTFGEMQFKGFSVSLEAYNTML 780

Query: 781 DAYGKECQMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLE 840
           DAYGKE QME FRSVLQRM+ETS   DHYTYNIMINIYGEQGWIDEVA+VLTELK CGL 
Sbjct: 781 DAYGKESQMEIFRSVLQRMKETSCASDHYTYNIMINIYGEQGWIDEVADVLTELKECGLG 840

Query: 841 PDLYSYNTLIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKW 893
           PDL SYNTLIKAYGIAGMVE+A  LVKEMRE  I+PD+ITYIN+I AL++ND++LEAVKW
Sbjct: 841 PDLCSYNTLIKAYGIAGMVEDAVHLVKEMRENGIQPDKITYINLINALRKNDEYLEAVKW 900

[Close]

BLAST of Csa1G257890 vs. NCBI nr
Match: gi|694354337|ref|XP_009358409.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Pyrus x bretschneideri])

HSP 1 Score: 1219.1 bits (3153), Expect = 0.0e+00
Identity = 609/900 (67.67%), Postives = 728/900 (80.89%), Query Frame = 1


Query: 1   MASLKLSFSLHSFDS-NKFD--FPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKP 60
           M SL+ S SL +FDS NK +  F  +   +S  C + ++N    +  S + + L+   + 
Sbjct: 2   MTSLRFSISLETFDSSNKLNSSFCYSHVNVSRACVVNALNWGNRIKVSGLPFELSGTSEL 61

Query: 61  SKVSQVEQDASDVSQSRFDEIVARKKYFTSKKPSKRAAGSHFSFSRNCN-----DNILFN 120
           +++ + E + S V  +      + K     KK S+R  G   S SR        +N+  N
Sbjct: 62  NQMGE-ETNLSLVEGNPEFRHESEKGSGGPKKESRREKGLKLS-SRKSRWVRELENLYVN 121

Query: 121 GGELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLR 180
           GGE DV+YS ISS LSLE CN IL+RLE+C+D K L FFEWMRSNGKL+ NVSA+N VLR
Sbjct: 122 GGEFDVDYSVISSHLSLEHCNDILRRLERCSDVKALRFFEWMRSNGKLERNVSAFNSVLR 181

Query: 181 VLGRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQ 240
           V+GR+EDWDAAEKL++E+ A LG +L++QVFNTLIYAC K    E G KWFRMML+ ++Q
Sbjct: 182 VMGRREDWDAAEKLVQELLAGLGGELNYQVFNTLIYACCKLGRAELGAKWFRMMLDHRIQ 241

Query: 241 PNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVI 300
           PN+ATFGMLMGLYQK  +++E+EF F+QMRN GIVC++AY++MITIY R+NLYDKAEEVI
Sbjct: 242 PNIATFGMLMGLYQKGWNVEEAEFTFSQMRNCGIVCQSAYSAMITIYTRINLYDKAEEVI 301

Query: 301 QLMQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKA 360
            LM+ED+V  NL+NW+VM+NAYCQQGK+++AE+V  SM+EAGFS NIIAYNTLITGYGKA
Sbjct: 302 GLMREDRVRLNLDNWLVMINAYCQQGKVDDAEVVLVSMQEAGFSPNIIAYNTLITGYGKA 361

Query: 361 SNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNL 420
           S MD A  LFLGIKN+G+EPDETTYRSMIEGWGRA  YK A+WYYKELKR GY PNSSNL
Sbjct: 362 SKMDAAHHLFLGIKNAGLEPDETTYRSMIEGWGRADKYKEAKWYYKELKRLGYKPNSSNL 421

Query: 421 FTLINLQAKHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYR 480
           +TLINLQAKHEDE G ++TL+DML +GC+ SSI+G +LQAYEK  R+  VP LL GSFY+
Sbjct: 422 YTLINLQAKHEDEEGAIRTLDDMLTMGCQYSSILGTLLQAYEKVGRVDKVPRLLRGSFYQ 481

Query: 481 KVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENA 540
            +L SQTSCSILVMAYVKHCLVDD +KVLREK WKD  FE+NLYHLLICSCKELG LE+A
Sbjct: 482 HILVSQTSCSILVMAYVKHCLVDDTMKVLREKLWKDPPFEDNLYHLLICSCKELGRLEDA 541

Query: 541 IKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRM 600
           +KIY Q+P+  NKPN+HI CTMIDIYSIM  F++ EK Y+ L+SSG  LDLIAY++ VRM
Sbjct: 542 VKIYKQMPRHFNKPNMHIMCTMIDIYSIMSLFTEAEKTYVELKSSGNVLDLIAYSIAVRM 601

Query: 601 YVKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSW 660
           YVKAGSLEDACSVL+ M EQ+ IVPDIY+ RDMLRIYQRCG + KL DLYY++LKSGV+W
Sbjct: 602 YVKAGSLEDACSVLEAMEEQEGIVPDIYMFRDMLRIYQRCGRLDKLKDLYYKLLKSGVTW 661

Query: 661 DQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLF 720
           D+EMYNCVINCCS ALPVDE+S +FDEMLQCGF PNT+T NVMLDVYGK++L  KAR LF
Sbjct: 662 DREMYNCVINCCSHALPVDEISEIFDEMLQCGFVPNTITFNVMLDVYGKARLLKKARELF 721

Query: 721 GLAQKRGLVDAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKEC 780
            +AQK GLVD ISYNT+I+ YG+NKDF++MSST Q+M+F GFSVSLEAYN MLDAYGKE 
Sbjct: 722 RMAQKWGLVDMISYNTIIAAYGRNKDFRSMSSTFQEMQFKGFSVSLEAYNSMLDAYGKES 781

Query: 781 QMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYN 840
           QME FRS+LQRM++TS   DHYTYNIMINIYGEQGWIDEVA VLTELK CGL PDL SYN
Sbjct: 782 QMERFRSILQRMKKTSCASDHYTYNIMINIYGEQGWIDEVAGVLTELKECGLGPDLCSYN 841

Query: 841 TLIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKWSLWMKQM 893
           TLIKAYGIAGMVE+A  LVKEMRE  +EPD+ITY+N+I ALQRND++LEAVKWSLWMKQM
Sbjct: 842 TLIKAYGIAGMVEDAVHLVKEMRENGVEPDKITYVNLIAALQRNDEYLEAVKWSLWMKQM 899

[Close]

BLAST of Csa1G257890 vs. NCBI nr
Match: gi|658003538|ref|XP_008394283.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Malus domestica])

HSP 1 Score: 1219.1 bits (3153), Expect = 0.0e+00
Identity = 610/900 (67.78%), Postives = 724/900 (80.44%), Query Frame = 1


Query: 1   MASLKLSFSLHSFDS-NKFDFPL--NSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKP 60
           M SL+ S SL +FDS NKF+         +S  C + ++N    +  S   + L+   + 
Sbjct: 2   MTSLRFSISLDTFDSSNKFNSSXCYGHAXVSRACVVNALNWGNRIKVSGFPFELSGTSEL 61

Query: 61  SKVSQVEQDASDVSQSRFDEIVARKKYFTSKKPSKRAAGSHFSFSRNCN-----DNILFN 120
           S++ + E + S V  +      + K     KK  +R   S  S SR        +N+  N
Sbjct: 62  SQMGE-EXNLSLVEGNPDFRHESEKGSGGPKKEXRREKXSKLS-SRKSRWVRELENLFVN 121

Query: 121 GGELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLR 180
           GGE DV+YS ISS LS+E CN IL+RLE+CND K L FFEWMRSNGKL+ NVSA+N VLR
Sbjct: 122 GGEFDVDYSVISSHLSMEHCNDILRRLERCNDVKALRFFEWMRSNGKLERNVSAFNSVLR 181

Query: 181 VLGRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQ 240
           V GR+EDWDAAEKL++E+ A LG +L++QVFNTLIYAC K    E G KWFRMML+ ++Q
Sbjct: 182 VXGRREDWDAAEKLVQELLAGLGGELNYQVFNTLIYACCKLGRAELGAKWFRMMLDHRIQ 241

Query: 241 PNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVI 300
           PN+ATFGMLMGLYQK  +++E+EF F+QMRN GIVC++AY++MITIY R+NLYDKAEEVI
Sbjct: 242 PNIATFGMLMGLYQKGWNVEEAEFTFSQMRNCGIVCQSAYSAMITIYTRLNLYDKAEEVI 301

Query: 301 QLMQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKA 360
            LM+ED+V  NL+NW+VM+NAYCQQGK+++AE+V  SM+EAGFS NIIAYNTLITGYGKA
Sbjct: 302 GLMREDRVRLNLDNWLVMINAYCQQGKVDDAEVVLVSMQEAGFSPNIIAYNTLITGYGKA 361

Query: 361 SNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNL 420
           S MD A  LFLGIKN+G+EPDETTYRSMIEGWGRA  YK AEWYYKELKR GY PNSSNL
Sbjct: 362 SKMDAAHHLFLGIKNAGLEPDETTYRSMIEGWGRADKYKEAEWYYKELKRLGYKPNSSNL 421

Query: 421 FTLINLQAKHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYR 480
           +TL+NLQAKHEDE G ++TL+DML +GC+ SSI+G +LQAYEK  R+  VP LL GSFY+
Sbjct: 422 YTLVNLQAKHEDEEGAIRTLDDMLTMGCQYSSILGTLLQAYEKVGRVDKVPRLLRGSFYQ 481

Query: 481 KVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENA 540
            +L SQTSCSILVMAYVKHCLVDD +KVLREK WKD  FE+NLYHLLICSCKELG LE+A
Sbjct: 482 HILVSQTSCSILVMAYVKHCLVDDTMKVLREKLWKDPPFEDNLYHLLICSCKELGRLEDA 541

Query: 541 IKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRM 600
           +KIY Q+ +  NKPN+HI CTMIDIYSIMG F++ EK Y+ L+SSGI LDLIAY++ VRM
Sbjct: 542 VKIYKQMXRHFNKPNMHIMCTMIDIYSIMGLFTEAEKTYVELKSSGIVLDLIAYSIAVRM 601

Query: 601 YVKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSW 660
           YVKAGSLEDACSVL+ M EQ+ IVPDIY+ RDMLRIYQRCG + KL DLYY++LKSGV+W
Sbjct: 602 YVKAGSLEDACSVLEAMEEQEGIVPDIYMFRDMLRIYQRCGRLDKLKDLYYKLLKSGVTW 661

Query: 661 DQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLF 720
           D+EMYNCVINCCS ALPVDE+S +FDEMLQCGF PNT+T NVMLDVYGK++L  KAR LF
Sbjct: 662 DREMYNCVINCCSHALPVDEISEIFDEMLQCGFVPNTITFNVMLDVYGKARLLKKARELF 721

Query: 721 GLAQKRGLVDAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKEC 780
            +AQK GLVD ISYNT+I+ YG+NKDF++MSST Q+M+F GFSVSLEAYN MLDAYGKE 
Sbjct: 722 RMAQKWGLVDMISYNTIIAAYGRNKDFRSMSSTFQEMQFKGFSVSLEAYNSMLDAYGKES 781

Query: 781 QMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYN 840
           QME FRSVLQRM++TS   DHYTYNIMIN+YGEQGWIDEVA VLTELK C L PDL SYN
Sbjct: 782 QMERFRSVLQRMKKTSXASDHYTYNIMINVYGEQGWIDEVAGVLTELKECXLGPDLCSYN 841

Query: 841 TLIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKWSLWMKQM 893
           TLIKAYGIAGMVE+A  LVKEMRE  IEPD+ITY+N+I ALQRND++LEAVKWSLWMKQM
Sbjct: 842 TLIKAYGIAGMVEDAVHLVKEMRENGIEPDKITYVNLIAALQRNDEYLEAVKWSLWMKQM 899

The following BLAST results are available for this feature:

BLAST of Csa1G257890 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PP342_ARATH	0.0e+00	60.53	Pentatricopeptide repeat-containing protein At4g30825, chloroplastic OS=Arabidop...	[more]
PP217_ARATH	6.4e-48	21.70	Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana GN...	[more]
PP344_ARATH	1.1e-47	22.95	Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidop...	[more]
PP362_ARATH	1.2e-46	23.43	Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN...	[more]
PP325_ARATH	1.3e-40	23.74	Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidop...	[more]

BLAST of Csa1G257890 vs. TrEMBL


Match Name	E-value	Identity	Description
B9SQY5_RICCO	0.0e+00	65.25	Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO...	[more]
M5VU43_PRUPE	0.0e+00	74.74	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019391mg PE=4 S...	[more]
A0A067L3T5_JATCU	0.0e+00	63.90	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04067 PE=4 SV=1	[more]
V4UR41_9ROSI	0.0e+00	70.47	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007430mg PE=4 SV=1	[more]
A0A061GWJ7_THECC	0.0e+00	64.92	Tetratricopeptide repeat (TPR)-like superfamily protein OS=Theobroma cacao GN=TC...	[more]

BLAST of Csa1G257890 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G30825.1	0.0e+00	60.53	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G06920.1	3.6e-49	21.70	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G31850.1	6.2e-49	22.95	proton gradient regulation 3	[more]
AT5G02860.1	6.8e-48	23.43	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G19440.1	7.3e-42	23.74	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of Csa1G257890 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449457967\|ref\|XP_004146719.1\|	0.0e+00	100.00	PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic ...	[more]
gi\|659086251\|ref\|XP_008443835.1\|	0.0e+00	94.77	PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic ...	[more]
gi\|645275895\|ref\|XP_008243032.1\|	0.0e+00	67.14	PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic ...	[more]
gi\|694354337\|ref\|XP_009358409.1\|	0.0e+00	67.67	PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic ...	[more]
gi\|658003538\|ref\|XP_008394283.1\|	0.0e+00	67.78	PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat
IPR004575	MAT1/Tfb3
IPR011990	TPR-like_helical_dom_sf

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0007049	cell cycle

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007049	cell cycle
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU129399	cucumber EST collection version 3.0	transcribed_cluster
CU176593	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G257890.1	Csa1G257890.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU129399	CU129399	transcribed_cluster
CU176593	CU176593	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 271..299 score: 0.0044coord: 307..335 score: 2.5E-6coord: 585..611 score: 0.0015coord: 166..191 score: 0.34coord: 480..503 score: 0.19coord: 553..579 score: 0.39coord: 724..754 score: 2.
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 338..383 score: 3.3E-11coord: 656..699 score: 5.7E-8coord: 760..801 score: 2.3E-8coord: 826..873 score: 1.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 194..245 score: 0.
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 760..792 score: 4.1E-5coord: 585..619 score: 3.2E-7coord: 271..303 score: 3.3E-5coord: 794..827 score: 4.1E-7coord: 202..235 score: 0.0013coord: 341..374 score: 1.6E-5coord: 690..721 score: 0.0014coord: 376..408 score: 8.3E-4coord: 724..757 score: 1.1E-5coord: 656..689 score: 2.4E-6coord: 307..338 score: 4.8E-7coord: 829..862 score: 6.3
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 512..546 score: 7.958coord: 408..442 score: 6.588coord: 653..687 score: 10.819coord: 618..652 score: 6.96coord: 827..861 score: 13.197coord: 477..511 score: 6.39coord: 862..894 score: 7.333coord: 303..337 score: 11.389coord: 199..233 score: 9.262coord: 163..193 score: 8.396coord: 234..264 score: 6.369coord: 582..612 score: 9.339coord: 792..826 score: 11.575coord: 268..302 score: 9.24coord: 757..791 score: 8.177coord: 547..581 score: 7.87coord: 722..756 score: 9.734coord: 373..407 score: 11.772coord: 338..372 score: 11.378coord: 688..718 score: 7
IPR004575	Cdk-activating kinase assembly factor MAT1/Tfb3	PANTHER	PTHR12683	FAMILY NOT NAMED	coord: 83..894 score:
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 164..323 score: 5.5E-10coord: 657..885 score: 5.3E-5coord: 533..647 score: 5.5
None	No IPR available	unknown	Coil	Coil	coord: 840..860 scor
None	No IPR available	PANTHER	PTHR12683:SF10	SUBFAMILY NOT NAMED	coord: 83..894 score:
None	No IPR available	unknown	SSF81901	HCP-like	coord: 176..402 score: 2.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G257890	Cla018752	Watermelon (97103) v1	cuwmB085
Csa1G257890	MELO3C010202	Melon (DHL92) v3.5.1	cumeB060
Csa1G257890	Lsi06G010780	Bottle gourd (USVL1VR-Ls)	culsiB066
Csa1G257890	MELO3C010202.2	Melon (DHL92) v3.6.1	cumedB053
Csa1G257890	Cla97C06G121830	Watermelon (97103) v2	cuwmbB071
Csa1G257890	Bhi02G000662	Wax gourd	cuwgoB103
Csa1G257890	CSPI01G17930	Wild cucumber (PI 183967)	cpicuB004
Csa1G257890	Cucsa.170710	Cucumber (Gy14) v1	cgycuB260
Csa1G257890	CmaCh10G004500	Cucurbita maxima (Rimu)	cmacuB067
Csa1G257890	CmoCh10G004830	Cucurbita moschata (Rifu)	cmocuB056
Csa1G257890	Cp4.1LG18g05820	Cucurbita pepo (Zucchini)	cpecuB356
Csa1G257890	CsGy1G018020	Cucumber (Gy14) v2	cgybcuB006
Csa1G257890	Carg10013	Silver-seed gourd	carcuB0136

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G257890	Cucumber (Chinese Long) v2	cucuB009
Csa1G257890	Cucumber (Gy14) v1	cgycuB095
Csa1G257890	Cucurbita maxima (Rimu)	cmacuB102
Csa1G257890	Cucurbita moschata (Rifu)	cmocuB091
Csa1G257890	Watermelon (Charleston Gray)	cuwcgB072
Csa1G257890	Cucurbita pepo (Zucchini)	cpecuB641
Csa1G257890	Bottle gourd (USVL1VR-Ls)	culsiB011
Csa1G257890	Cucumber (Gy14) v2	cgybcuB008
Csa1G257890	Silver-seed gourd	carcuB0532