Lsi06G010780 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi06G010780
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPentatricopeptide repeat-containing protein, putative
Locationchr06 : 21038467 .. 21041169 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTCCCTTAAACTTTCCTCATCTTTACATTCTTTTGATTCTAAGAAGTTCGATTTCCCTGTTAATTCAGCTCTTTTCTCTGATTGCTGCTCTGTTTTCTCCATCACTGGTTATATTCATCTCAATAAGTCCTGCATACTTTACTCTCTGGCTAGGGTTCACAAGCCCTCTAAGCTTTCTGAGGTCGAACCAGAGGCGTCCGACGTTTCCCAATCCAAATTTTCTGTTGATGGAATTGATGCCAGGAAGAAGTCTTTTGGCAGTAAGAAGCATTCAAAGAGAGCGCCAGGTTCGTATTTTAGTTTCAGTAGGAATTGTAGTGAGAAAGTTTTCGATAATATTCTTTTTAATGGTGGCGAATTGGATGTCAATTACTCCACTATATCCTCCGATTTGAGCTTAGAGGATTGCAATGCTATTTTAAAAAGGCTAGAGAAGTGTAATGATTCCAAAACACTAGGTTTCTTTGAGTGGATGAGAAGCAACGGGAAACTAGAACACAATGTGAGTGCCTATAATTTGGTTCTTCGAGTGTTGGGCAGGCAGCAAGAATGGGATGCTGCTGAGAAGCTAATTAGAGAAGTTAGAGCTGAGTTGGGTTCTCAATTGGATTTTCAGGTTTTTAACACTCTTATTTATGCTTGTTATAAATTGGGGCTCGTGGAGCGGGGTACGAAATGGTTTCGAATGATGTTGGAATGCCAAGTGCAACCCAATGTTGCAACATTTGGAATGCTTATGGGTCTTTATCAGAAGGGTTGTGACATTAAGGAGTCTGAGTTTGCCTTTAATCAGATGAGAAACTTTGGAATTGTCTGTGAAACAGCATATGCATCTATGATTACTATATACACACGTATGAACTTGTATGATAAAGCAGAAGAGGTGATTCGATTTATGCAAGAAGATAAAGTAATACCAAATCTAGAGAATTGGTTAGTAATGCTTAACGCTTATTGTCAGCAAGGCAAAATGGAGGAAGCTGAACTTGTGTTTGCCTCAATGGAAGAAGCTGGGTTTTCTTCCAATATCATTGCATACAATACCTTGATTACTGGGTATGGAAAGGCATCGAATATGGATGCTGCTCAACGGCTGTTCTTGGGCATCAAGAACTCTGGAGTAGAACCTGATGAAACGACTTACCGCTCCATGATTGAAGGTTGGGGTCGAGCTGGTAATTATAAAATGGCAGAATGGTACTATAAGGAGCTCAAGCGGAAAGGATATATGCCGAATGCCTCTAACTTGTTCACCCTTATAAATCTACAAGCCAAACATGAGGATGAAGCAGGTGCACTTAAAACTCTTAATGATATGCTAAAGATTGGATGCCGGCCTTCTTCCATTGTTGGAAATGTTTTACAAGCATATGAAAAGGCTAGAAGAATAAAAAGTGTGCCTACCCTCTTGACAGGGTCGTTCTATCGGAAAGTTCTGAGCAGCCAAACATCTTGCTCAATTCTGGTAATGGCATATGTGAAGCACTGTTTAGTGGATGATGCTTTAAAAGTGTTGAGGGAAAAAGAGTGGAAAGATCATCACTTTGAGGAAAATTTGTATCATTTGCTAATATGTTCATGTAAAGAGTTGGGCCATCTCGAGAATGCAATTAAGATCTACACTCAACTTCCTAAACGTGAAAACAAACCAAACTTGCATATCACGTGCACAATGATTGATATCTACAGCATCATGGGTAGGTTCTCTGATGGGGAGAAGCTTTATCTAAGCCTGAGATCATCAGGCATTCCTTTGGATTTGATTGCCTTCAATGTAGTTGTGAGAATGTTTGTTAAAGCTGGATCATTGGAAGATGCATGCTCAGTTCTTGACTTGATGGATGAGCAACAGGACATTGTTCCAGACATATATCTGTTCCGGGACATGCTTCGTATTTACCAACGATGTGGCATGGTGCATAAGCTAGCAGATTTGTATTATAGGATACTGAAGAGTGGAGTGACTTGGGATCAGGAAATGTATAATTGTGTCATAAATTGCTGTTCCCGTGCTCTGCCTGTTGATGAACTTTCTAGGCTTTTTGATGAAATGCTTCAATGTGGGTTTGCCCCAAATACCGTGACCTTAAATGTCATGCTTGATGTTTATGGGAAATCCAAGCTTTTCACCAAGGCAAGAAATTTATTTGGGCTGGCTCAGAAAAGAGGTTTGGTTGATGTAATCTCTTATAATACTATGATATCTGCTTATGGTAAGAATAAGGACTTCAAAAACATGTCATCTACAGTTCAAAAAATGAAATTTAACGGCTTTTCAGTTTCCCTTGAAGCATACAATTGTATGTTGGATGCTTATGGCAAAGAATGCCAAATGGAGAATTTCAGAAGTGTCTTACAGCGAATGCAAGAGTCAAGTTCTGAACGTGATCATTACACATATAACATCATGATCAACATCTATGGAGAACAAGGATGGATCGACGAAGTTGCAGAAGTTCTGTCGGAACTGAAAGCATGTGGACTTGAACCCGATTTGTACAGCTACAACACATTGATCAAGGCATATGGAATAGCAGGGATGGTTGAAGAAGCCGCTCGGTTGGTGAAAGAAATGAGAGAAAAGAGGATAGAACCGGATAGGATAACTTATATTAACATGATTAGAGCACTGCAAAGAAACGATCAATTTTTAGAGGCAATCAAGTGGTCATTGTGGATGAAGCAAATGAAATATTGA

mRNA sequence

ATGGCCTCCCTTAAACTTTCCTCATCTTTACATTCTTTTGATTCTAAGAAGTTCGATTTCCCTGTTAATTCAGCTCTTTTCTCTGATTGCTGCTCTGTTTTCTCCATCACTGGTTATATTCATCTCAATAAGTCCTGCATACTTTACTCTCTGGCTAGGGTTCACAAGCCCTCTAAGCTTTCTGAGGTCGAACCAGAGGCGTCCGACGTTTCCCAATCCAAATTTTCTGTTGATGGAATTGATGCCAGGAAGAAGTCTTTTGGCAGTAAGAAGCATTCAAAGAGAGCGCCAGGTTCGTATTTTAGTTTCAGTAGGAATTGTAGTGAGAAAGTTTTCGATAATATTCTTTTTAATGGTGGCGAATTGGATGTCAATTACTCCACTATATCCTCCGATTTGAGCTTAGAGGATTGCAATGCTATTTTAAAAAGGCTAGAGAAGTGTAATGATTCCAAAACACTAGGTTTCTTTGAGTGGATGAGAAGCAACGGGAAACTAGAACACAATGTGAGTGCCTATAATTTGGTTCTTCGAGTGTTGGGCAGGCAGCAAGAATGGGATGCTGCTGAGAAGCTAATTAGAGAAGTTAGAGCTGAGTTGGGTTCTCAATTGGATTTTCAGGTTTTTAACACTCTTATTTATGCTTGTTATAAATTGGGGCTCGTGGAGCGGGGTACGAAATGGTTTCGAATGATGTTGGAATGCCAAGTGCAACCCAATGTTGCAACATTTGGAATGCTTATGGGTCTTTATCAGAAGGGTTGTGACATTAAGGAGTCTGAGTTTGCCTTTAATCAGATGAGAAACTTTGGAATTGTCTGTGAAACAGCATATGCATCTATGATTACTATATACACACGTATGAACTTGTATGATAAAGCAGAAGAGGTGATTCGATTTATGCAAGAAGATAAAGTAATACCAAATCTAGAGAATTGGTTAGTAATGCTTAACGCTTATTGTCAGCAAGGCAAAATGGAGGAAGCTGAACTTGTGTTTGCCTCAATGGAAGAAGCTGGGTTTTCTTCCAATATCATTGCATACAATACCTTGATTACTGGGTATGGAAAGGCATCGAATATGGATGCTGCTCAACGGCTGTTCTTGGGCATCAAGAACTCTGGAGTAGAACCTGATGAAACGACTTACCGCTCCATGATTGAAGGTTGGGGTCGAGCTGGTAATTATAAAATGGCAGAATGGTACTATAAGGAGCTCAAGCGGAAAGGATATATGCCGAATGCCTCTAACTTGTTCACCCTTATAAATCTACAAGCCAAACATGAGGATGAAGCAGGTGCACTTAAAACTCTTAATGATATGCTAAAGATTGGATGCCGGCCTTCTTCCATTGTTGGAAATGTTTTACAAGCATATGAAAAGGCTAGAAGAATAAAAAGTGTGCCTACCCTCTTGACAGGGTCGTTCTATCGGAAAGTTCTGAGCAGCCAAACATCTTGCTCAATTCTGGTAATGGCATATGTGAAGCACTGTTTAGTGGATGATGCTTTAAAAGTGTTGAGGGAAAAAGAGTGGAAAGATCATCACTTTGAGGAAAATTTGTATCATTTGCTAATATGTTCATGTAAAGAGTTGGGCCATCTCGAGAATGCAATTAAGATCTACACTCAACTTCCTAAACGTGAAAACAAACCAAACTTGCATATCACGTGCACAATGATTGATATCTACAGCATCATGGGTAGGTTCTCTGATGGGGAGAAGCTTTATCTAAGCCTGAGATCATCAGGCATTCCTTTGGATTTGATTGCCTTCAATGTAGTTGTGAGAATGTTTGTTAAAGCTGGATCATTGGAAGATGCATGCTCAGTTCTTGACTTGATGGATGAGCAACAGGACATTGTTCCAGACATATATCTGTTCCGGGACATGCTTCGTATTTACCAACGATGTGGCATGGTGCATAAGCTAGCAGATTTGTATTATAGGATACTGAAGAGTGGAGTGACTTGGGATCAGGAAATGTATAATTGTGTCATAAATTGCTGTTCCCGTGCTCTGCCTGTTGATGAACTTTCTAGGCTTTTTGATGAAATGCTTCAATGTGGGTTTGCCCCAAATACCGTGACCTTAAATGTCATGCTTGATGTTTATGGGAAATCCAAGCTTTTCACCAAGGCAAGAAATTTATTTGGGCTGGCTCAGAAAAGAGGTTTGGTTGATGTAATCTCTTATAATACTATGATATCTGCTTATGGTAAGAATAAGGACTTCAAAAACATGTCATCTACAGTTCAAAAAATGAAATTTAACGGCTTTTCAGTTTCCCTTGAAGCATACAATTGTATGTTGGATGCTTATGGCAAAGAATGCCAAATGGAGAATTTCAGAAGTGTCTTACAGCGAATGCAAGAGTCAAGTTCTGAACGTGATCATTACACATATAACATCATGATCAACATCTATGGAGAACAAGGATGGATCGACGAAGTTGCAGAAGTTCTGTCGGAACTGAAAGCATGTGGACTTGAACCCGATTTGTACAGCTACAACACATTGATCAAGGCATATGGAATAGCAGGGATGGTTGAAGAAGCCGCTCGGTTGGTGAAAGAAATGAGAGAAAAGAGGATAGAACCGGATAGGATAACTTATATTAACATGATTAGAGCACTGCAAAGAAACGATCAATTTTTAGAGGCAATCAAGTGGTCATTGTGGATGAAGCAAATGAAATATTGA

Coding sequence (CDS)

ATGGCCTCCCTTAAACTTTCCTCATCTTTACATTCTTTTGATTCTAAGAAGTTCGATTTCCCTGTTAATTCAGCTCTTTTCTCTGATTGCTGCTCTGTTTTCTCCATCACTGGTTATATTCATCTCAATAAGTCCTGCATACTTTACTCTCTGGCTAGGGTTCACAAGCCCTCTAAGCTTTCTGAGGTCGAACCAGAGGCGTCCGACGTTTCCCAATCCAAATTTTCTGTTGATGGAATTGATGCCAGGAAGAAGTCTTTTGGCAGTAAGAAGCATTCAAAGAGAGCGCCAGGTTCGTATTTTAGTTTCAGTAGGAATTGTAGTGAGAAAGTTTTCGATAATATTCTTTTTAATGGTGGCGAATTGGATGTCAATTACTCCACTATATCCTCCGATTTGAGCTTAGAGGATTGCAATGCTATTTTAAAAAGGCTAGAGAAGTGTAATGATTCCAAAACACTAGGTTTCTTTGAGTGGATGAGAAGCAACGGGAAACTAGAACACAATGTGAGTGCCTATAATTTGGTTCTTCGAGTGTTGGGCAGGCAGCAAGAATGGGATGCTGCTGAGAAGCTAATTAGAGAAGTTAGAGCTGAGTTGGGTTCTCAATTGGATTTTCAGGTTTTTAACACTCTTATTTATGCTTGTTATAAATTGGGGCTCGTGGAGCGGGGTACGAAATGGTTTCGAATGATGTTGGAATGCCAAGTGCAACCCAATGTTGCAACATTTGGAATGCTTATGGGTCTTTATCAGAAGGGTTGTGACATTAAGGAGTCTGAGTTTGCCTTTAATCAGATGAGAAACTTTGGAATTGTCTGTGAAACAGCATATGCATCTATGATTACTATATACACACGTATGAACTTGTATGATAAAGCAGAAGAGGTGATTCGATTTATGCAAGAAGATAAAGTAATACCAAATCTAGAGAATTGGTTAGTAATGCTTAACGCTTATTGTCAGCAAGGCAAAATGGAGGAAGCTGAACTTGTGTTTGCCTCAATGGAAGAAGCTGGGTTTTCTTCCAATATCATTGCATACAATACCTTGATTACTGGGTATGGAAAGGCATCGAATATGGATGCTGCTCAACGGCTGTTCTTGGGCATCAAGAACTCTGGAGTAGAACCTGATGAAACGACTTACCGCTCCATGATTGAAGGTTGGGGTCGAGCTGGTAATTATAAAATGGCAGAATGGTACTATAAGGAGCTCAAGCGGAAAGGATATATGCCGAATGCCTCTAACTTGTTCACCCTTATAAATCTACAAGCCAAACATGAGGATGAAGCAGGTGCACTTAAAACTCTTAATGATATGCTAAAGATTGGATGCCGGCCTTCTTCCATTGTTGGAAATGTTTTACAAGCATATGAAAAGGCTAGAAGAATAAAAAGTGTGCCTACCCTCTTGACAGGGTCGTTCTATCGGAAAGTTCTGAGCAGCCAAACATCTTGCTCAATTCTGGTAATGGCATATGTGAAGCACTGTTTAGTGGATGATGCTTTAAAAGTGTTGAGGGAAAAAGAGTGGAAAGATCATCACTTTGAGGAAAATTTGTATCATTTGCTAATATGTTCATGTAAAGAGTTGGGCCATCTCGAGAATGCAATTAAGATCTACACTCAACTTCCTAAACGTGAAAACAAACCAAACTTGCATATCACGTGCACAATGATTGATATCTACAGCATCATGGGTAGGTTCTCTGATGGGGAGAAGCTTTATCTAAGCCTGAGATCATCAGGCATTCCTTTGGATTTGATTGCCTTCAATGTAGTTGTGAGAATGTTTGTTAAAGCTGGATCATTGGAAGATGCATGCTCAGTTCTTGACTTGATGGATGAGCAACAGGACATTGTTCCAGACATATATCTGTTCCGGGACATGCTTCGTATTTACCAACGATGTGGCATGGTGCATAAGCTAGCAGATTTGTATTATAGGATACTGAAGAGTGGAGTGACTTGGGATCAGGAAATGTATAATTGTGTCATAAATTGCTGTTCCCGTGCTCTGCCTGTTGATGAACTTTCTAGGCTTTTTGATGAAATGCTTCAATGTGGGTTTGCCCCAAATACCGTGACCTTAAATGTCATGCTTGATGTTTATGGGAAATCCAAGCTTTTCACCAAGGCAAGAAATTTATTTGGGCTGGCTCAGAAAAGAGGTTTGGTTGATGTAATCTCTTATAATACTATGATATCTGCTTATGGTAAGAATAAGGACTTCAAAAACATGTCATCTACAGTTCAAAAAATGAAATTTAACGGCTTTTCAGTTTCCCTTGAAGCATACAATTGTATGTTGGATGCTTATGGCAAAGAATGCCAAATGGAGAATTTCAGAAGTGTCTTACAGCGAATGCAAGAGTCAAGTTCTGAACGTGATCATTACACATATAACATCATGATCAACATCTATGGAGAACAAGGATGGATCGACGAAGTTGCAGAAGTTCTGTCGGAACTGAAAGCATGTGGACTTGAACCCGATTTGTACAGCTACAACACATTGATCAAGGCATATGGAATAGCAGGGATGGTTGAAGAAGCCGCTCGGTTGGTGAAAGAAATGAGAGAAAAGAGGATAGAACCGGATAGGATAACTTATATTAACATGATTAGAGCACTGCAAAGAAACGATCAATTTTTAGAGGCAATCAAGTGGTCATTGTGGATGAAGCAAATGAAATATTGA

Protein sequence

MASLKLSSSLHSFDSKKFDFPVNSALFSDCCSVFSITGYIHLNKSCILYSLARVHKPSKLSEVEPEASDVSQSKFSVDGIDARKKSFGSKKHSKRAPGSYFSFSRNCSEKVFDNILFNGGELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLEHNVSAYNLVLRVLGRQQEWDAAEKLIREVRAELGSQLDFQVFNTLIYACYKLGLVERGTKWFRMMLECQVQPNVATFGMLMGLYQKGCDIKESEFAFNQMRNFGIVCETAYASMITIYTRMNLYDKAEEVIRFMQEDKVIPNLENWLVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDAAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRKGYMPNASNLFTLINLQAKHEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYEKARRIKSVPTLLTGSFYRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAFNVVVRMFVKAGSLEDACSVLDLMDEQQDIVPDIYLFRDMLRIYQRCGMVHKLADLYYRILKSGVTWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGLVDVISYNTMISAYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRMQESSSERDHYTYNIMINIYGEQGWIDEVAEVLSELKACGLEPDLYSYNTLIKAYGIAGMVEEAARLVKEMREKRIEPDRITYINMIRALQRNDQFLEAIKWSLWMKQMKY
BLAST of Lsi06G010780 vs. Swiss-Prot
Match: PP342_ARATH (Pentatricopeptide repeat-containing protein At4g30825, chloroplastic OS=Arabidopsis thaliana GN=At4g30825 PE=2 SV=2)

HSP 1 Score: 1104.4 bits (2855), Expect = 0.0e+00
Identity = 558/902 (61.86%), Postives = 691/902 (76.61%), Query Frame = 1

Query: 1   MASLKLSSSLHSFDSKK--FDFPVNSALFSDCCSVFSITGYIHLNKSCILYSLARVHKPS 60
           M SL+ S  L  FDSK+  F F  N + F D   +  +T  IH  ++  + S  RV    
Sbjct: 1   MGSLRFSIPLDPFDSKRKRFHFSANPSQFPDQFPIHFVTSSIHATRASSIGSSTRVLDKI 60

Query: 61  KLSEVEPEASDVSQSKFSVDGIDARKKS--FGSKKHSKRAPGSYFSFSRNCSEKVFDNIL 120
           ++S +  EA++ + +  S   ++  + S   G ++ +K+     FSF R  ++   +N+ 
Sbjct: 61  RVSSLGTEANENAINSASAAPVERSRSSKLSGDQRGTKKYVARKFSFRRGSNDLELENLF 120

Query: 121 FNGGELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLEHNVSAYNLV 180
            N GE+DVNYS I    SLE CN ILKRLE C+D+  + FF+WMR NGKL  N  AY+L+
Sbjct: 121 VNNGEIDVNYSAIKPGQSLEHCNGILKRLESCSDTNAIKFFDWMRCNGKLVGNFVAYSLI 180

Query: 181 LRVLGRQQEWDAAEKLIREVRAELGSQLDFQVFNTLIYACYKLGLVERGTKWFRMMLECQ 240
           LRVLGR++EWD AE LI+E+      Q  +QVFNT+IYAC K G V+  +KWF MMLE  
Sbjct: 181 LRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFG 240

Query: 241 VQPNVATFGMLMGLYQKGCDIKESEFAFNQMRNFGIVCETAYASMITIYTRMNLYDKAEE 300
           V+PNVAT GMLMGLYQK  +++E+EFAF+ MR FGIVCE+AY+SMITIYTR+ LYDKAEE
Sbjct: 241 VRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTRLRLYDKAEE 300

Query: 301 VIRFMQEDKVIPNLENWLVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYG 360
           VI  M++D+V   LENWLVMLNAY QQGKME AE +  SME AGFS NIIAYNTLITGYG
Sbjct: 301 VIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYG 360

Query: 361 KASNMDAAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRKGYMPNAS 420
           K   M+AAQ LF  + N G+EPDET+YRSMIEGWGRA NY+ A+ YY+ELKR GY PN+ 
Sbjct: 361 KIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSF 420

Query: 421 NLFTLINLQAKHEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYEKARRIKSVPTLLTGSF 480
           NLFTLINLQAK+ D  GA+KT+ DM  IGC+ SSI+G +LQAYEK  +I  VP +L GSF
Sbjct: 421 NLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSF 480

Query: 481 YRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLE 540
           +  +  +QTS S LVMAYVKH +VDD L +LREK+W+D  FE +LYHLLICSCKE G L 
Sbjct: 481 HNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLT 540

Query: 541 NAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAFNVVV 600
           +A+KIY    + + + NLHIT TMIDIY++MG FS+ EKLYL+L+SSG+ LD I F++VV
Sbjct: 541 DAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVV 600

Query: 601 RMFVKAGSLEDACSVLDLMDEQQDIVPDIYLFRDMLRIYQRCGMVHKLADLYYRILKSGV 660
           RM+VKAGSLE+ACSVL++MDEQ+DIVPD+YLFRDMLRIYQ+C +  KL  LYYRI KSG+
Sbjct: 601 RMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGI 660

Query: 661 TWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARN 720
            W+QEMYNCVINCC+RALP+DELS  F+EM++ GF PNTVT NV+LDVYGK+KLF K   
Sbjct: 661 HWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNE 720

Query: 721 LFGLAQKRGLVDVISYNTMISAYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGK 780
           LF LA++ G+VDVISYNT+I+AYGKNKD+ NMSS ++ M+F+GFSVSLEAYN +LDAYGK
Sbjct: 721 LFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGK 780

Query: 781 ECQMENFRSVLQRMQESSSERDHYTYNIMINIYGEQGWIDEVAEVLSELKACGLEPDLYS 840
           + QME FRS+L+RM++S+S  DHYTYNIMINIYGEQGWIDEVA+VL ELK  GL PDL S
Sbjct: 781 DKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCS 840

Query: 841 YNTLIKAYGIAGMVEEAARLVKEMREKRIEPDRITYINMIRALQRNDQFLEAIKWSLWMK 899
           YNTLIKAYGI GMVEEA  LVKEMR + I PD++TY N++ AL+RND+FLEAIKWSLWMK
Sbjct: 841 YNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMK 900

BLAST of Lsi06G010780 vs. Swiss-Prot
Match: PP217_ARATH (Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 1.1e-50
Identity = 166/751 (22.10%), Postives = 334/751 (44.47%), Query Frame = 1

Query: 141 ILKRLEKCNDSKTLGFFEWMRSNGKLEHNVSAYNLVLRVLGRQQEWDAAEKLIREVR-AE 200
           +L+RL+  N  + + +F W     +L H   +YN +L V+ R + +DA ++++ E+  A 
Sbjct: 71  VLRRLKDVN--RAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAG 130

Query: 201 LGSQLDFQVFNTLIYACYKLGLVERGTKWFRMMLECQVQPNVATFGMLMGLYQKGCDIKE 260
            G  ++  +   ++  C K   +  G    +MM + + +P  + +  L+G +        
Sbjct: 131 FGPSVNTCI--EMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDM 190

Query: 261 SEFAFNQMRNFGIVCET-AYASMITIYTRMNLYDKAEEVIRFMQEDKVIPNLENWLVMLN 320
               F QM+  G       + ++I  + +    D A  ++  M+   +  ++  + V ++
Sbjct: 191 MLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCID 250

Query: 321 AYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDAAQRLFLGIKNSGVEP 380
           ++ + GK++ A   F  +E  G   + + Y ++I    KA+ +D A  +F  ++ +   P
Sbjct: 251 SFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVP 310

Query: 381 DETTYRSMIEGWGRAGNYKMAEWYYKELKRKGYMPNASNLFTLINLQAKHEDEAGALKTL 440
               Y +MI G+G AG +  A    +  + KG +P+      ++    K      ALK  
Sbjct: 311 CTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVF 370

Query: 441 NDMLKIGCRPSSIVGNVLQAYEKARRIKSVPTLLTGSFYRKVLSSQTSCSILVMAYVKHC 500
            +M K      S    ++    +A ++ +   L        +  +  + +I+V    K  
Sbjct: 371 EEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQ 430

Query: 501 LVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLPKRENKPNLHITC 560
            +D+A  +  E ++K    +E  +  LI    ++G +++A K+Y ++   + + N  +  
Sbjct: 431 KLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYT 490

Query: 561 TMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAFNVVVRMFVKAGSLEDACSVLDLMDEQ 620
           ++I  +   GR  DG K+Y  + +     DL   N  +    KAG  E   ++ + +  +
Sbjct: 491 SLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKAR 550

Query: 621 QDIVPDIYLFRDMLRIYQRCGMVHKLADLYYRILKSGVTWDQEMYNCVINCCSRALPVDE 680
           +  VPD   +  ++    + G  ++  +L+Y + + G   D   YN VI+   +   V++
Sbjct: 551 R-FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNK 610

Query: 681 LSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQ-KRGLVDVISYNTMIS 740
             +L +EM   GF P  VT   ++D   K     +A  LF  A+ KR  ++V+ Y+++I 
Sbjct: 611 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 670

Query: 741 AYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRMQESSSER 800
            +GK          ++++   G + +L  +N +LDA  K  ++       Q M+E     
Sbjct: 671 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 730

Query: 801 DHYTYNIMINIYGEQGWIDEVAEVLSELKACGLEPDLYSYNTLIKAYGIAGMVEEAARLV 860
           +  TY I+IN   +    ++      E++  G++P   SY T+I     AG + EA  L 
Sbjct: 731 NQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALF 790

Query: 861 KEMREKRIEPDRITYINMIRALQRNDQFLEA 889
              +     PD   Y  MI  L   ++ ++A
Sbjct: 791 DRFKANGGVPDSACYNAMIEGLSNGNRAMDA 816

BLAST of Lsi06G010780 vs. Swiss-Prot
Match: PP362_ARATH (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 3.4e-49
Identity = 147/628 (23.41%), Postives = 284/628 (45.22%), Query Frame = 1

Query: 275 ETAYASMITIYTRMNLYDKAEEVIR----FMQEDKVIPNLENWLV--MLNAYCQQGKMEE 334
           E+  + ++     +  + K +  +R    FM++      L+N +V  +++   ++G++  
Sbjct: 132 ESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSS 191

Query: 335 AELVFASMEEAGFSSNIIAYNTLITGYGKASNMDAAQRLFLGIKNSGVEPDETTYRSMIE 394
           A  +F  ++E GFS ++ +Y +LI+ +  +     A  +F  ++  G +P   TY  ++ 
Sbjct: 192 AANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILN 251

Query: 395 GWGRAGN-YKMAEWYYKELKRKGYMPNASNLFTLINLQAKHEDEAGALKTLNDMLKIGCR 454
            +G+ G  +       +++K  G  P+A    TLI    +      A +   +M   G  
Sbjct: 252 VFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFS 311

Query: 455 PSSIVGN-VLQAYEKARRIKSVPTLLTGSFYRKVLSSQTSCSILVMAYVKHCLVDDALKV 514
              +  N +L  Y K+ R K    +L          S  + + L+ AY +  ++D+A+++
Sbjct: 312 YDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMEL 371

Query: 515 LREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLPKRENKPNLHITCTMIDIYSI 574
             +   K    +   Y  L+   +  G +E+A+ I+ ++     KPN+      I +Y  
Sbjct: 372 KNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGN 431

Query: 575 MGRFSDGEKLYLSLRSSGIPLDLIAFNVVVRMFVKAGSLEDACSVLDLMDEQQDIVPDIY 634
            G+F++  K++  +   G+  D++ +N ++ +F + G   +   V   M ++   VP+  
Sbjct: 432 RGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM-KRAGFVPERE 491

Query: 635 LFRDMLRIYQRCGMVHKLADLYYRILKSGVTWDQEMYNCVINCCSRALPVDELSRLFDEM 694
            F  ++  Y RCG   +   +Y R+L +GVT D   YN V+   +R    ++  ++  EM
Sbjct: 492 TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM 551

Query: 695 LQCGFAPNTVTLNVMLDVYGKSK----LFTKARNLF-GLAQKRGLVDVISYNTMISAYGK 754
                 PN +T   +L  Y   K    + + A  ++ G+ + R ++      T++    K
Sbjct: 552 EDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVL----LKTLVLVCSK 611

Query: 755 NKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRMQESSSERDHYT 814
                       ++K  GFS  +   N M+  YG+   +     VL  M+E        T
Sbjct: 612 CDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMAT 671

Query: 815 YNIMINIYGEQGWIDEVAEVLSELKACGLEPDLYSYNTLIKAYGIAGMVEEAARLVKEMR 874
           YN ++ ++       +  E+L E+ A G++PD+ SYNT+I AY     + +A+R+  EMR
Sbjct: 672 YNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMR 731

Query: 875 EKRIEPDRITYINMIRALQRNDQFLEAI 890
              I PD ITY   I +   +  F EAI
Sbjct: 732 NSGIVPDVITYNTFIGSYAADSMFEEAI 754

BLAST of Lsi06G010780 vs. Swiss-Prot
Match: PP344_ARATH (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 3.4e-49
Identity = 174/746 (23.32%), Postives = 341/746 (45.71%), Query Frame = 1

Query: 145  LEKCNDSKTLG----FFEWMRSNGKLEHNVSAYNLVLRVLGRQQEWDAAEKLIREVRAEL 204
            L++ +D++ L     F+  M  +G +  +V  + +++  L +   +  A   + +V  + 
Sbjct: 335  LDRFSDNRDLDSVKQFWSEMEKDGHVP-DVVTFTILVDALCKAGNFGEAFDTL-DVMRDQ 394

Query: 205  GSQLDFQVFNTLIYACYKLGLVERGTKWFRMMLECQVQPNVATFGMLMGLYQKGCDIKES 264
            G   +   +NTLI    ++  ++   + F  M    V+P   T+ + +  Y K  D   +
Sbjct: 395  GILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSA 454

Query: 265  EFAFNQMRNFGIVCETAYASMITIYT--RMNLYDKAEEVIRFMQEDKVIPNLENWLVMLN 324
               F +M+  GI      A   ++Y+  +     +A+++   +++  ++P+   + +M+ 
Sbjct: 455  LETFEKMKTKGIA-PNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMK 514

Query: 325  AYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDAAQRLFLGIKNSGVEP 384
             Y + G+++EA  + + M E G   ++I  N+LI    KA  +D A ++F+ +K   ++P
Sbjct: 515  CYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 574

Query: 385  DETTYRSMIEGWGRAGNYKMAEWYYKELKRKGYMPNASNLFTLINLQAKHEDEAGALKTL 444
               TY +++ G G+ G  + A   ++ + +KG  PN     TL +   K+++   ALK L
Sbjct: 575  TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 634

Query: 445  NDMLKIGCRPSSIVGN-VLQAYEKARRIKSVPTLLTGSFYRKVLSSQTSCSILVMAYVKH 504
              M+ +GC P     N ++    K  ++K           + V     +   L+   VK 
Sbjct: 635  FKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFF-HQMKKLVYPDFVTLCTLLPGVVKA 694

Query: 505  CLVDDALKVLREKEWKDHHFEENLY-HLLICSCKELGHLENAIKIYTQLPKRENKPNLHI 564
             L++DA K++    +       NL+   LI S      ++NA+    +L       +   
Sbjct: 695  SLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDS 754

Query: 565  TCTMIDIYSIMGRFSDGEKLYLS--LRSSGIPLDLIAFNVVVRMFVKAGSLEDACSVLDL 624
                I  YS       G +       +  G+   L  +N+++   ++A  +E A  V  L
Sbjct: 755  ILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVF-L 814

Query: 625  MDEQQDIVPDIYLFRDMLRIYQRCGMVHKLADLYYRILKSGVTWDQEMYNCVINCCSRAL 684
              +    +PD+  +  +L  Y + G + +L +LY  +       +   +N VI+   +A 
Sbjct: 815  QVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAG 874

Query: 685  PVDE-LSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLF-GLAQKRGLVDVISY 744
             VD+ L   +D M    F+P   T   ++D   KS    +A+ LF G+       +   Y
Sbjct: 875  NVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIY 934

Query: 745  NTMISAYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRMQE 804
            N +I+ +GK  +     +  ++M   G    L+ Y+ ++D      +++      + ++E
Sbjct: 935  NILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKE 994

Query: 805  SSSERDHYTYNIMINIYGEQGWIDEVAEVLSELKAC-GLEPDLYSYNTLIKAYGIAGMVE 864
            S    D   YN++IN  G+   ++E   + +E+K   G+ PDLY+YN+LI   GIAGMVE
Sbjct: 995  SGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVE 1054

Query: 865  EAARLVKEMREKRIEPDRITYINMIR 878
            EA ++  E++   +EP+  T+  +IR
Sbjct: 1055 EAGKIYNEIQRAGLEPNVFTFNALIR 1075

BLAST of Lsi06G010780 vs. Swiss-Prot
Match: PP408_ARATH (Pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Arabidopsis thaliana GN=At5g39980 PE=2 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 4.1e-42
Identity = 134/549 (24.41%), Postives = 260/549 (47.36%), Query Frame = 1

Query: 145 LEKCND-SKTLGFFEWMRSNGKLEHNVSAYNLVLRVLGRQQEWDAAEKLIREVRAELGSQ 204
           L + ND  ++L   +W+    K   +V AYN+VLR + R +++D A  L  E+R    + 
Sbjct: 129 LSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAP 188

Query: 205 LDFQVFNTLIYACYKLGLVERGTKWFRMMLECQVQPNVATFGMLMGLYQKGCDIKESEFA 264
            D   ++TLI +  K G+ +    W + M + +V  ++  +  L+ L ++ CD  ++   
Sbjct: 189 -DRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISI 248

Query: 265 FNQMRNFGIVCE-TAYASMITIYTRMNLYDKAEEVIRFMQEDKVIPNLENWLVMLNAYCQ 324
           F++++  GI  +  AY SMI +Y +  L+ +A  +I+ M E  V+PN  ++  +L+ Y +
Sbjct: 249 FSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVE 308

Query: 325 QGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDAAQRLFLGIKNSGVEPDETT 384
             K  EA  VFA M+E   + ++   N +I  YG+   +  A RLF  ++   +EP+  +
Sbjct: 309 NHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVS 368

Query: 385 YRSMIEGWGRAGNYKMAEWYYKELKRKGYMPNASNLFTLINLQAKHEDEAGALKTLNDML 444
           Y +++  +G A  +  A   ++ ++RK    N     T+I +  K  +   A   + +M 
Sbjct: 369 YNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQ 428

Query: 445 KIGCRPSSIV-GNVLQAYEKARRIKSVPTLLTGSFYRKVLSSQTSCSILVMAYVKHCLVD 504
             G  P++I    ++  + KA ++    TL        V   Q     +++AY +  L+ 
Sbjct: 429 SRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMG 488

Query: 505 DALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLPKRENKPNLHITCTMI 564
            A ++L E +  D+   E    +L     + G  E A  ++ Q  +     ++ +   MI
Sbjct: 489 HAKRLLHELKLPDNIPRETAITIL----AKAGRTEEATWVFRQAFESGEVKDISVFGCMI 548

Query: 565 DIYSIMGRFSDGEKLYLSLRSSGIPLDLIAFNVVVRMFVKAGSLEDACSVLDLMDEQQDI 624
           ++YS   R+ +  +++  +R++G   D     +V+  + K    E A +V   M E+  +
Sbjct: 549 NLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCV 608

Query: 625 VPDIYLFRDMLRIYQRCGMVHKLADLYYRILKSGVTWDQEMYNCVINCCSRALPVDELSR 684
            PD   F+ ML +Y        +  L+ R+        +E++  V     RA  +++ SR
Sbjct: 609 FPDEVHFQ-MLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERADKLNDASR 668

Query: 685 LFDEMLQCG 691
           + + M + G
Sbjct: 669 VMNRMRERG 671

BLAST of Lsi06G010780 vs. TrEMBL
Match: A0A0A0LTR9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G257890 PE=4 SV=1)

HSP 1 Score: 1675.2 bits (4337), Expect = 0.0e+00
Identity = 837/900 (93.00%), Postives = 864/900 (96.00%), Query Frame = 1

Query: 1   MASLKLSSSLHSFDSKKFDFPVNSALFSDCCSVFSITGYIHLNKSCILYSLARVHKPSKL 60
           MASLKLS SLHSFDS KFDFP+NS L SD CS+FSI  ++HLNKS I+YSLARVHKPSK+
Sbjct: 1   MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV 60

Query: 61  SEVEPEASDVSQSKFSVDGIDARKKSFGSKKHSKRAPGSYFSFSRNCSEKVFDNILFNGG 120
           S+VE +ASDVSQS+F  D I ARKK F SKK SKRA GS+FSFSRNC+    DNILFNGG
Sbjct: 61  SQVEQDASDVSQSRF--DEIVARKKYFTSKKPSKRAAGSHFSFSRNCN----DNILFNGG 120

Query: 121 ELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLEHNVSAYNLVLRVL 180
           ELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKL+HNVSAYNLVLRVL
Sbjct: 121 ELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVL 180

Query: 181 GRQQEWDAAEKLIREVRAELGSQLDFQVFNTLIYACYKLGLVERGTKWFRMMLECQVQPN 240
           GRQ++WDAAEKLI EVRAELGSQLDFQVFNTLIYACYK   VE+GTKWFRMMLECQVQPN
Sbjct: 181 GRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPN 240

Query: 241 VATFGMLMGLYQKGCDIKESEFAFNQMRNFGIVCETAYASMITIYTRMNLYDKAEEVIRF 300
           VATFGMLMGLYQK CDIKESEFAFNQMRNFGIVCETAYASMITIY RMNLYDKAEEVI+ 
Sbjct: 241 VATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQL 300

Query: 301 MQEDKVIPNLENWLVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASN 360
           MQEDKVIPNLENW+VMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASN
Sbjct: 301 MQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASN 360

Query: 361 MDAAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRKGYMPNASNLFT 420
           MD AQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKR+GYMPN+SNLFT
Sbjct: 361 MDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFT 420

Query: 421 LINLQAKHEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYEKARRIKSVPTLLTGSFYRKV 480
           LINLQAKHEDEAG LKTLNDMLKIGCRPSSIVGNVLQAYEKARR+KSVP LLTGSFYRKV
Sbjct: 421 LINLQAKHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKV 480

Query: 481 LSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIK 540
           LSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIK
Sbjct: 481 LSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIK 540

Query: 541 IYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAFNVVVRMFV 600
           IYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIA+NVVVRM+V
Sbjct: 541 IYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYV 600

Query: 601 KAGSLEDACSVLDLMDEQQDIVPDIYLFRDMLRIYQRCGMVHKLADLYYRILKSGVTWDQ 660
           KAGSLEDACSVLDLM EQQDIVPDIYL RDMLRIYQRCGMVHKLADLYYRILKSGV+WDQ
Sbjct: 601 KAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQ 660

Query: 661 EMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGL 720
           EMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGL
Sbjct: 661 EMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGL 720

Query: 721 AQKRGLVDVISYNTMISAYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQM 780
           AQKRGLVD ISYNTMIS YGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQM
Sbjct: 721 AQKRGLVDAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQM 780

Query: 781 ENFRSVLQRMQESSSERDHYTYNIMINIYGEQGWIDEVAEVLSELKACGLEPDLYSYNTL 840
           ENFRSVLQRMQE+SSE DHYTYNIMINIYGEQGWIDEVAEVL+ELKACGLEPDLYSYNTL
Sbjct: 781 ENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTL 840

Query: 841 IKAYGIAGMVEEAARLVKEMREKRIEPDRITYINMIRALQRNDQFLEAIKWSLWMKQMKY 900
           IKAYGIAGMVEEAA+LVKEMREKRIEPDRITYINMIRALQRNDQFLEA+KWSLWMKQMKY
Sbjct: 841 IKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKWSLWMKQMKY 894

BLAST of Lsi06G010780 vs. TrEMBL
Match: B9SQY5_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1406220 PE=4 SV=1)

HSP 1 Score: 1213.7 bits (3139), Expect = 0.0e+00
Identity = 603/918 (65.69%), Postives = 745/918 (81.15%), Query Frame = 1

Query: 1   MASLKLSSSLHSFDSKKFDFPVNSALFSDCCSVFSITGYIHLNKSCILYSLARVHKPSKL 60
           MASL+L+ SL +FDSKK +F  N    S   S FSI+       +CI+ +L     P K+
Sbjct: 37  MASLRLTISLDTFDSKKPNFSRNPLQLSTHTSPFSISSSTPSPGACIITTLT-TFSPVKV 96

Query: 61  SEVEPE----------ASDVSQSKFSVDGID---------ARKKSFGSKKHSKRAPGSYF 120
           S +E E          ++D+     +   ID          +K   G+KK  KR  G  F
Sbjct: 97  SRIETELFEDDVVLSTSNDLPHECINEGLIDRNPNSKREIRKKYRGGAKKRGKRKVGFKF 156

Query: 121 SFSRNCSEKVFDNILFNGGELDVNYSTISSDLSLEDCNAILKRLEKC-NDSKTLGFFEWM 180
           ++ RN  E+  +++   GGELDVNYS I  +LSLE CN ILKRLE+C +D K+L FFEWM
Sbjct: 157 NYKRNGIEQEIEDLFVEGGELDVNYSVIHCNLSLEHCNLILKRLERCSSDDKSLRFFEWM 216

Query: 181 RSNGKLEHNVSAYNLVLRVLGRQQEWDAAEKLIREVRAELGSQLDFQVFNTLIYACYKLG 240
           R+NGKLE N++AYN++LRVLGR+++W  AE++I EV    GS+LDF+VFNTLIYAC + G
Sbjct: 217 RNNGKLEKNLNAYNVILRVLGRREDWGTAERMIGEVSDSFGSELDFRVFNTLIYACSRRG 276

Query: 241 LVERGTKWFRMMLECQVQPNVATFGMLMGLYQKGCDIKESEFAFNQMRNFGIVCETAYAS 300
            +  G KWFRMMLE  VQPN+ATFGMLMGLYQKG +++E+EF F++MR+FGI+C++AY++
Sbjct: 277 NMLLGGKWFRMMLELGVQPNIATFGMLMGLYQKGWNVEEAEFVFSKMRSFGIICQSAYSA 336

Query: 301 MITIYTRMNLYDKAEEVIRFMQEDKVIPNLENWLVMLNAYCQQGKMEEAELVFASMEEAG 360
           MITIYTR++LY+KAEE+I  M EDKV  N+ENWLV+LNAY QQG++EEAE V   M+EA 
Sbjct: 337 MITIYTRLSLYNKAEEIIGLMGEDKVAMNVENWLVLLNAYSQQGRLEEAEQVLVEMQEAS 396

Query: 361 FSSNIIAYNTLITGYGKASNMDAAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAE 420
           FS NI+A+NTLITGYGK SNM AAQRLFL I+N+G+EPDETTYRSMIEGWGR GNYK AE
Sbjct: 397 FSPNIVAFNTLITGYGKLSNMAAAQRLFLDIQNAGLEPDETTYRSMIEGWGRTGNYKEAE 456

Query: 421 WYYKELKRKGYMPNASNLFTLINLQAKHEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYE 480
           WYYKELKR GYMPN+SNL+TLINLQAKH+D+ GA+ TL+DMLKIGC+ SSI+G +L+AYE
Sbjct: 457 WYYKELKRLGYMPNSSNLYTLINLQAKHDDDEGAIGTLDDMLKIGCQHSSILGTLLKAYE 516

Query: 481 KARRIKSVPTLLTGSFYRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEEN 540
           KA RI  VP LL  SFY+ VL +QTSCSILVM YVK+CLVD+ALKVL +K+WKD  FE+N
Sbjct: 517 KAGRINKVPLLLKDSFYQHVLVNQTSCSILVMTYVKNCLVDEALKVLGDKKWKDQTFEDN 576

Query: 541 LYHLLICSCKELGHLENAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSL 600
           LYHLLICSCKELG+LE+A++IYTQ+PK E+KPNLHI+CT+IDIYS++G F++ EKLY  L
Sbjct: 577 LYHLLICSCKELGNLESAVRIYTQMPKSEDKPNLHISCTVIDIYSVLGCFAEAEKLYQQL 636

Query: 601 RSSGIPLDLIAFNVVVRMFVKAGSLEDACSVLDLMDEQQDIVPDIYLFRDMLRIYQRCGM 660
           + SGI LD++AF++VVRM+VKAGSL+DACSVL  M++Q++I+PDIYL+RDMLRIYQ+CGM
Sbjct: 637 KCSGIALDMVAFSIVVRMYVKAGSLKDACSVLATMEKQENIIPDIYLYRDMLRIYQQCGM 696

Query: 661 VHKLADLYYRILKSGVTWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNV 720
           + KL DLY++ILKS V WDQE+YNC+INCC+RALPV ELSRLF EMLQ GF+PNT+T NV
Sbjct: 697 MSKLKDLYHKILKSEVDWDQELYNCIINCCARALPVGELSRLFSEMLQRGFSPNTITFNV 756

Query: 721 MLDVYGKSKLFTKARNLFGLAQKRGLVDVISYNTMISAYGKNKDFKNMSSTVQKMKFNGF 780
           MLDVYGK+KLF KA+ LF +A+KRGLVDVISYNT+I+AYG NKDFKNM+S V+ M+F+GF
Sbjct: 757 MLDVYGKAKLFNKAKELFWMARKRGLVDVISYNTVIAAYGHNKDFKNMASAVRNMQFDGF 816

Query: 781 SVSLEAYNCMLDAYGKECQMENFRSVLQRMQESSSERDHYTYNIMINIYGEQGWIDEVAE 840
           SVSLEAYNCMLD YGKE QME FR+VLQRM++SS   DHYTYNIMINIYGEQGWIDEVA 
Sbjct: 817 SVSLEAYNCMLDGYGKEGQMECFRNVLQRMKQSSYTSDHYTYNIMINIYGEQGWIDEVAG 876

Query: 841 VLSELKACGLEPDLYSYNTLIKAYGIAGMVEEAARLVKEMREKRIEPDRITYINMIRALQ 899
           VL+EL+ CGL PDL SYNTLIKAYG+AGMVE+A  LVKEMRE  IEPD+ITY N+I ALQ
Sbjct: 877 VLTELRECGLRPDLCSYNTLIKAYGVAGMVEDAIDLVKEMRENGIEPDKITYSNLITALQ 936

BLAST of Lsi06G010780 vs. TrEMBL
Match: M5VU43_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019391mg PE=4 SV=1)

HSP 1 Score: 1206.8 bits (3121), Expect = 0.0e+00
Identity = 574/764 (75.13%), Postives = 676/764 (88.48%), Query Frame = 1

Query: 135 LEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLEHNVSAYNLVLRVLGRQQEWDAAEKLIR 194
           LE CN ILKRLE+C+D KTL FFEWMRSNGKLE NVSA+NLVLRV+GR+++WD AEKL++
Sbjct: 1   LEHCNDILKRLERCSDVKTLRFFEWMRSNGKLERNVSAFNLVLRVMGRREDWDGAEKLVQ 60

Query: 195 EVRAELGSQLDFQVFNTLIYACYKLGLVERGTKWFRMMLECQVQPNVATFGMLMGLYQKG 254
           EV A+LG +L++QVFNTLIYAC KLG +E G KWFRMMLE +VQPN+ATFGMLM LYQKG
Sbjct: 61  EVIADLGCELNYQVFNTLIYACCKLGRLELGGKWFRMMLEHEVQPNIATFGMLMVLYQKG 120

Query: 255 CDIKESEFAFNQMRNFGIVCETAYASMITIYTRMNLYDKAEEVIRFMQEDKVIPNLENWL 314
            +++E+EF F QMRNFGI+C++AY+SMITIYTR+NL++KAEE+I  ++ED+V  NL+NWL
Sbjct: 121 WNVEEAEFTFFQMRNFGILCQSAYSSMITIYTRLNLFEKAEEIIGLLKEDRVRLNLDNWL 180

Query: 315 VMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDAAQRLFLGIKNS 374
           VM+NAYCQQGK+++AELV  SM+EAGFS NIIAYNTLITGYGKAS MDAA  LF GIKN+
Sbjct: 181 VMINAYCQQGKVDDAELVLVSMQEAGFSPNIIAYNTLITGYGKASKMDAADHLFQGIKNA 240

Query: 375 GVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRKGYMPNASNLFTLINLQAKHEDEAGA 434
           G+EPDETTYRSMIEGWGRA NY  AEWYYKELKR GY PN+SNL+TLINLQAKHEDE GA
Sbjct: 241 GLEPDETTYRSMIEGWGRADNYMEAEWYYKELKRLGYKPNSSNLYTLINLQAKHEDEEGA 300

Query: 435 LKTLNDMLKIGCRPSSIVGNVLQAYEKARRIKSVPTLLTGSFYRKVLSSQTSCSILVMAY 494
           ++TL+DML +GC+ SSI+G +LQAYEKA R+  VP LL GSFY+ +L SQTSCSILVMAY
Sbjct: 301 IRTLDDMLTMGCQYSSILGTLLQAYEKAGRVDKVPRLLRGSFYQHILVSQTSCSILVMAY 360

Query: 495 VKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLPKRENKPNL 554
           VKHCLVDD +KVLREK WKD  FE+NLYHLLICSCKELGHLENA+KIY Q+P+ ++KPN+
Sbjct: 361 VKHCLVDDTMKVLREKLWKDPPFEDNLYHLLICSCKELGHLENAVKIYKQMPRYDDKPNM 420

Query: 555 HITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAFNVVVRMFVKAGSLEDACSVLDL 614
           HI CTMIDIY IMG F++ EK+Y+ L+SSG+ LD+IA+++ VRM+VKAG+LEDACSVLD 
Sbjct: 421 HIMCTMIDIYIIMGLFTEAEKIYVELKSSGVALDMIAYSIAVRMYVKAGALEDACSVLDT 480

Query: 615 MDEQQDIVPDIYLFRDMLRIYQRCGMVHKLADLYYRILKSGVTWDQEMYNCVINCCSRAL 674
           MD+Q+ IVPDIY+FRDMLRIYQRCG + KL DLYY++LKSGVTWDQEMYNCVINCCSRAL
Sbjct: 481 MDKQEGIVPDIYMFRDMLRIYQRCGRLDKLKDLYYKLLKSGVTWDQEMYNCVINCCSRAL 540

Query: 675 PVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGLVDVISYNT 734
           PVDE+S +FDEMLQCGF PNT+T NVMLDVYGK+KL  KAR LF +AQK GLVD+ISYNT
Sbjct: 541 PVDEISEIFDEMLQCGFVPNTITFNVMLDVYGKAKLLKKARKLFWMAQKWGLVDMISYNT 600

Query: 735 MISAYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRMQESS 794
           +I+AYG+NKD +NMSST  +M+F GFSVSLEAYN MLDAYGKE QME FRSVLQRM+E+S
Sbjct: 601 IIAAYGRNKDLRNMSSTFGEMQFKGFSVSLEAYNTMLDAYGKESQMERFRSVLQRMKETS 660

Query: 795 SERDHYTYNIMINIYGEQGWIDEVAEVLSELKACGLEPDLYSYNTLIKAYGIAGMVEEAA 854
              DHYTYNIMINIYGEQGWIDEVA+VL+ELK CGL PDL SYNTLIKAYGIAGMVE+A 
Sbjct: 661 CASDHYTYNIMINIYGEQGWIDEVADVLTELKECGLGPDLCSYNTLIKAYGIAGMVEDAV 720

Query: 855 RLVKEMREKRIEPDRITYINMIRALQRNDQFLEAIKWSLWMKQM 899
            LVKEMRE  I+PD+ITYIN+I AL++ND++LEA+KWSLWMKQM
Sbjct: 721 HLVKEMRENGIQPDKITYINLINALRKNDEYLEAVKWSLWMKQM 764

BLAST of Lsi06G010780 vs. TrEMBL
Match: V4UR41_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007430mg PE=4 SV=1)

HSP 1 Score: 1203.3 bits (3112), Expect = 0.0e+00
Identity = 585/816 (71.69%), Postives = 698/816 (85.54%), Query Frame = 1

Query: 83  RKKSFGSKKHSKRAPGSYFSFSRNCSEKVFDNILFNGGELDVNYSTISSDLSLEDCNAIL 142
           +K  +G KK SKR       F R+  E+  +    N GELDVNYS I +DLSL++CNAIL
Sbjct: 32  KKGRYGVKKGSKRDVDMSLRFRRSAREQEREYFFANDGELDVNYSVIGADLSLDECNAIL 91

Query: 143 KRLEKCNDSKTLGFFEWMRSNGKLEHNVSAYNLVLRVLGRQQEWDAAEKLIREVRAELGS 202
           KRLEK +DSK+L FFEWMR+NGKLE NV AYNLVLRV  R+++WDAAEK+IREVR  LG+
Sbjct: 92  KRLEKYSDSKSLKFFEWMRTNGKLEKNVIAYNLVLRVFSRREDWDAAEKMIREVRMSLGT 151

Query: 203 QLDFQVFNTLIYACYKLGLVERGTKWFRMMLECQVQPNVATFGMLMGLYQKGCDIKESEF 262
           +L+FQ+FNTLIYAC K G VE G KWF MMLEC VQPNVATFGMLMGLY+K   ++E+EF
Sbjct: 152 KLNFQLFNTLIYACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWSVEEAEF 211

Query: 263 AFNQMRNFGIVCETAYASMITIYTRMNLYDKAEEVIRFMQEDKVIPNLENWLVMLNAYCQ 322
           AFNQMR  G+VCE+AY++MITIYTR++LY+KAEEVIR ++EDKV+PNLENWLVMLNAY Q
Sbjct: 212 AFNQMRKLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQ 271

Query: 323 QGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDAAQRLFLGIKNSGVEPDETT 382
           QGK+EEAELV  SM EAGFS NI+AYNTLITGYGK SNMDA+QRLFL IK+ G+EPDETT
Sbjct: 272 QGKLEEAELVLVSMREAGFSPNIVAYNTLITGYGKVSNMDASQRLFLSIKDVGLEPDETT 331

Query: 383 YRSMIEGWGRAGNYKMAEWYYKELKRKGYMPNASNLFTLINLQAKHEDEAGALKTLNDML 442
           YRSMIEGWGRAGNY+ A+WYYKELK  GY PNASNL+TLINLQAK+EDE GA+ TL+DML
Sbjct: 332 YRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLQAKYEDEEGAVNTLDDML 391

Query: 443 KIGCRPSSIVGNVLQAYEKARRIKSVPTLLTGSFYRKVLSSQTSCSILVMAYVKHCLVDD 502
           K+GC+ SSI+G +LQAYEKA R  +VP +L GS Y+ VL + TSCSILVMAYVKH L+DD
Sbjct: 392 KMGCQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFNLTSCSILVMAYVKHGLIDD 451

Query: 503 ALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLPKRENKPNLHITCTMID 562
           A+KV+ +K WKD  FE+NLYHLLICSCK+ GHL NA+KIY+ +   + KPNLHI CTMID
Sbjct: 452 AMKVMGDKRWKDTVFEDNLYHLLICSCKDSGHLANAVKIYSHMHICDGKPNLHIMCTMID 511

Query: 563 IYSIMGRFSDGEKLYLSLRSSGIPLDLIAFNVVVRMFVKAGSLEDACSVLDLMDEQQDIV 622
            YS+MG F++ EKLYL+L+SSGI LDLIAF VVVRM+VKAGSL+DAC+VL+ M++Q+DI 
Sbjct: 512 TYSVMGMFTEAEKLYLNLKSSGIRLDLIAFTVVVRMYVKAGSLKDACAVLETMEKQKDIE 571

Query: 623 PDIYLFRDMLRIYQRCGMVHKLADLYYRILKSGVTWDQEMYNCVINCCSRALPVDELSRL 682
           PD YL+ DMLRIYQ+CGM+ KL+ LYY+ILKSG+TW+QE+Y+CVINCC+RALP+DELSR+
Sbjct: 572 PDAYLYCDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRV 631

Query: 683 FDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGLVDVISYNTMISAYGKN 742
           FDEMLQ GF PN +TLNVMLD+YGK+KLF + R LF +A+K GLVDVISYNT+I+AYG+N
Sbjct: 632 FDEMLQHGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLVDVISYNTIIAAYGQN 691

Query: 743 KDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRMQESSSERDHYTY 802
           K+ ++MSSTVQ+M+F+GFSVSLEAYN MLDAYGKE QMENF++VL+RM+E+S   DHYTY
Sbjct: 692 KNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTY 751

Query: 803 NIMINIYGEQGWIDEVAEVLSELKACGLEPDLYSYNTLIKAYGIAGMVEEAARLVKEMRE 862
           NIMI+IYGEQGWI+EV  VL+ELK CGL PDL SYNTLIKAYGIAGMVE+A  LVKEMRE
Sbjct: 752 NIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRE 811

Query: 863 KRIEPDRITYINMIRALQRNDQFLEAIKWSLWMKQM 899
             IEPD+ITY NMI ALQRND+FLEAIKWSLWMKQ+
Sbjct: 812 NGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQI 847

BLAST of Lsi06G010780 vs. TrEMBL
Match: A0A067L3T5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04067 PE=4 SV=1)

HSP 1 Score: 1201.8 bits (3108), Expect = 0.0e+00
Identity = 596/917 (64.99%), Postives = 739/917 (80.59%), Query Frame = 1

Query: 1   MASLKLSSSLHSFDSKKFDFPVNSALFSDCCSVFSITGYIHLNKSCILYSLARVHKPSKL 60
           MASL+L  SL  FDSKK +F  N   FS   S FSI+  I   ++CI+ +++R   P  +
Sbjct: 1   MASLRLPISLDKFDSKKSNFSRNPHQFSTYTSTFSISSCILSTRACIIATVSRF-SPINV 60

Query: 61  SEVEPE--------ASDVSQSKFSVDGIDA--------RKKSFGSKKHSKRAPGSYFSFS 120
           S +E E         SD+     + D ++         +KK  G K+  KR  G  F + 
Sbjct: 61  SRLETELSEKVLSTTSDLVHETINEDLVEQNQDLKREIKKKYKGGKRGMKRQEGLKFRYK 120

Query: 121 RNCSEKVFDNILFNGGELDVNYSTISSDLSLEDCNAILKRLEKCN---DSKTLGFFEWMR 180
           RN SE   ++   +  E DVNYS I S+LSLE CN ILKRLE C+   +SKTL FFEWMR
Sbjct: 121 RNGSEPNIEDFFVHDSEFDVNYSVIKSNLSLEQCNYILKRLEGCSSDSESKTLRFFEWMR 180

Query: 181 SNGKLEHNVSAYNLVLRVLGRQQEWDAAEKLIREVRAELGSQLDFQVFNTLIYACYKLGL 240
           SN KLE NVSAYN +LRVLGR ++WD+AE++IREV      +LDF++FN+LIY C K G 
Sbjct: 181 SNRKLEKNVSAYNTILRVLGRMEDWDSAERMIREVGDRFSDELDFRIFNSLIYVCTKRGH 240

Query: 241 VERGTKWFRMMLECQVQPNVATFGMLMGLYQKGCDIKESEFAFNQMRNFGIVCETAYASM 300
           ++ G KWFRMMLE  VQPN+ATFGMLMGLYQKG +++E+EF F +MR+FGIVC++AY++M
Sbjct: 241 MKFGGKWFRMMLELGVQPNIATFGMLMGLYQKGWNVEEAEFVFAKMRSFGIVCQSAYSAM 300

Query: 301 ITIYTRMNLYDKAEEVIRFMQEDKVIPNLENWLVMLNAYCQQGKMEEAELVFASMEEAGF 360
           ITIYTR++LYDKAE+VI  M+EDKV+ NLENWLV+LNAY QQG++EEAE VF +M+EA  
Sbjct: 301 ITIYTRLSLYDKAEQVIGLMREDKVVLNLENWLVLLNAYSQQGRLEEAEQVFVAMQEANL 360

Query: 361 SSNIIAYNTLITGYGKASNMDAAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEW 420
           S NI+AYNTLITGYGK+SNM AAQR+F+ I+N G+EPDETTYRSMIEGWGR G+YK AE 
Sbjct: 361 SPNIVAYNTLITGYGKSSNMAAAQRVFVDIQNVGLEPDETTYRSMIEGWGRIGSYKEAEL 420

Query: 421 YYKELKRKGYMPNASNLFTLINLQAKHEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYEK 480
           Y+KELKR G+ PN+SNL+TLINLQAKH DE GA++TL DMLKIGC+  SI+G +L+AYEK
Sbjct: 421 YFKELKRLGFKPNSSNLYTLINLQAKHGDEEGAIRTLEDMLKIGCQYPSILGTLLKAYEK 480

Query: 481 ARRIKSVPTLLTGSFYRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENL 540
           A RI  VP LL GSFY  VL +QTSCS LVMAYVKHCLVDDALKVL +K+W D  FE+NL
Sbjct: 481 AGRINKVPLLLKGSFYHHVLVNQTSCSTLVMAYVKHCLVDDALKVLGDKQWNDPVFEDNL 540

Query: 541 YHLLICSCKELGHLENAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLR 600
           YHLLICSCKELG+LENA+KIYTQ+PK ++K NLHI+CTMIDIY  +G F +G+KLYL ++
Sbjct: 541 YHLLICSCKELGYLENAVKIYTQMPKSDDKLNLHISCTMIDIYGALGLFFEGDKLYLKIK 600

Query: 601 SSGIPLDLIAFNVVVRMFVKAGSLEDACSVLDLMDEQQDIVPDIYLFRDMLRIYQRCGMV 660
           SSGI LD+IA+++VVRM+VKAGSL+ ACSVL+ M++Q+DI+PDIYLFRDMLRIYQ+CGM+
Sbjct: 601 SSGISLDMIAYSIVVRMYVKAGSLKAACSVLETMEKQKDIIPDIYLFRDMLRIYQQCGMM 660

Query: 661 HKLADLYYRILKSGVTWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVM 720
            KL DLYY+IL+S V WDQE+YNCVINCC+RA+P+D+LS LF+EML  GF+PNT+T NVM
Sbjct: 661 SKLKDLYYKILRSEVVWDQELYNCVINCCARAVPIDDLSELFNEMLHRGFSPNTITFNVM 720

Query: 721 LDVYGKSKLFTKARNLFGLAQKRGLVDVISYNTMISAYGKNKDFKNMSSTVQKMKFNGFS 780
           LD YGK+KLF KAR LF +A+K+G++DVISYNTMI+AYG ++DFKNM+ST+Q M+F+GFS
Sbjct: 721 LDAYGKAKLFNKARELFMMARKQGMIDVISYNTMIAAYGHDRDFKNMASTIQNMQFDGFS 780

Query: 781 VSLEAYNCMLDAYGKECQMENFRSVLQRMQESSSERDHYTYNIMINIYGEQGWIDEVAEV 840
           VSLEAYNCMLDAYGK  QME+F++VLQRM++SS   DHYTYNIMIN+YGEQGWIDEVAEV
Sbjct: 781 VSLEAYNCMLDAYGKRGQMESFKNVLQRMKQSSCTSDHYTYNIMINVYGEQGWIDEVAEV 840

Query: 841 LSELKACGLEPDLYSYNTLIKAYGIAGMVEEAARLVKEMREKRIEPDRITYINMIRALQR 899
           L+ELK  GL P+L SYNTLIKAYGIAGM+EEA  LVKEMR+  IEP++ITY N+I ALQ+
Sbjct: 841 LAELKESGLGPNLCSYNTLIKAYGIAGMIEEAIDLVKEMRKSGIEPNKITYTNLITALQK 900

BLAST of Lsi06G010780 vs. TAIR10
Match: AT4G30825.1 (AT4G30825.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 1104.4 bits (2855), Expect = 0.0e+00
Identity = 558/902 (61.86%), Postives = 691/902 (76.61%), Query Frame = 1

Query: 1   MASLKLSSSLHSFDSKK--FDFPVNSALFSDCCSVFSITGYIHLNKSCILYSLARVHKPS 60
           M SL+ S  L  FDSK+  F F  N + F D   +  +T  IH  ++  + S  RV    
Sbjct: 1   MGSLRFSIPLDPFDSKRKRFHFSANPSQFPDQFPIHFVTSSIHATRASSIGSSTRVLDKI 60

Query: 61  KLSEVEPEASDVSQSKFSVDGIDARKKS--FGSKKHSKRAPGSYFSFSRNCSEKVFDNIL 120
           ++S +  EA++ + +  S   ++  + S   G ++ +K+     FSF R  ++   +N+ 
Sbjct: 61  RVSSLGTEANENAINSASAAPVERSRSSKLSGDQRGTKKYVARKFSFRRGSNDLELENLF 120

Query: 121 FNGGELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLEHNVSAYNLV 180
            N GE+DVNYS I    SLE CN ILKRLE C+D+  + FF+WMR NGKL  N  AY+L+
Sbjct: 121 VNNGEIDVNYSAIKPGQSLEHCNGILKRLESCSDTNAIKFFDWMRCNGKLVGNFVAYSLI 180

Query: 181 LRVLGRQQEWDAAEKLIREVRAELGSQLDFQVFNTLIYACYKLGLVERGTKWFRMMLECQ 240
           LRVLGR++EWD AE LI+E+      Q  +QVFNT+IYAC K G V+  +KWF MMLE  
Sbjct: 181 LRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFG 240

Query: 241 VQPNVATFGMLMGLYQKGCDIKESEFAFNQMRNFGIVCETAYASMITIYTRMNLYDKAEE 300
           V+PNVAT GMLMGLYQK  +++E+EFAF+ MR FGIVCE+AY+SMITIYTR+ LYDKAEE
Sbjct: 241 VRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTRLRLYDKAEE 300

Query: 301 VIRFMQEDKVIPNLENWLVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYG 360
           VI  M++D+V   LENWLVMLNAY QQGKME AE +  SME AGFS NIIAYNTLITGYG
Sbjct: 301 VIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYG 360

Query: 361 KASNMDAAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRKGYMPNAS 420
           K   M+AAQ LF  + N G+EPDET+YRSMIEGWGRA NY+ A+ YY+ELKR GY PN+ 
Sbjct: 361 KIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSF 420

Query: 421 NLFTLINLQAKHEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYEKARRIKSVPTLLTGSF 480
           NLFTLINLQAK+ D  GA+KT+ DM  IGC+ SSI+G +LQAYEK  +I  VP +L GSF
Sbjct: 421 NLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSF 480

Query: 481 YRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLE 540
           +  +  +QTS S LVMAYVKH +VDD L +LREK+W+D  FE +LYHLLICSCKE G L 
Sbjct: 481 HNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLT 540

Query: 541 NAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAFNVVV 600
           +A+KIY    + + + NLHIT TMIDIY++MG FS+ EKLYL+L+SSG+ LD I F++VV
Sbjct: 541 DAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVV 600

Query: 601 RMFVKAGSLEDACSVLDLMDEQQDIVPDIYLFRDMLRIYQRCGMVHKLADLYYRILKSGV 660
           RM+VKAGSLE+ACSVL++MDEQ+DIVPD+YLFRDMLRIYQ+C +  KL  LYYRI KSG+
Sbjct: 601 RMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGI 660

Query: 661 TWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARN 720
            W+QEMYNCVINCC+RALP+DELS  F+EM++ GF PNTVT NV+LDVYGK+KLF K   
Sbjct: 661 HWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNE 720

Query: 721 LFGLAQKRGLVDVISYNTMISAYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGK 780
           LF LA++ G+VDVISYNT+I+AYGKNKD+ NMSS ++ M+F+GFSVSLEAYN +LDAYGK
Sbjct: 721 LFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGK 780

Query: 781 ECQMENFRSVLQRMQESSSERDHYTYNIMINIYGEQGWIDEVAEVLSELKACGLEPDLYS 840
           + QME FRS+L+RM++S+S  DHYTYNIMINIYGEQGWIDEVA+VL ELK  GL PDL S
Sbjct: 781 DKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCS 840

Query: 841 YNTLIKAYGIAGMVEEAARLVKEMREKRIEPDRITYINMIRALQRNDQFLEAIKWSLWMK 899
           YNTLIKAYGI GMVEEA  LVKEMR + I PD++TY N++ AL+RND+FLEAIKWSLWMK
Sbjct: 841 YNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMK 900

BLAST of Lsi06G010780 vs. TAIR10
Match: AT3G06920.1 (AT3G06920.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 203.4 bits (516), Expect = 6.0e-52
Identity = 166/751 (22.10%), Postives = 334/751 (44.47%), Query Frame = 1

Query: 141 ILKRLEKCNDSKTLGFFEWMRSNGKLEHNVSAYNLVLRVLGRQQEWDAAEKLIREVR-AE 200
           +L+RL+  N  + + +F W     +L H   +YN +L V+ R + +DA ++++ E+  A 
Sbjct: 71  VLRRLKDVN--RAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAG 130

Query: 201 LGSQLDFQVFNTLIYACYKLGLVERGTKWFRMMLECQVQPNVATFGMLMGLYQKGCDIKE 260
            G  ++  +   ++  C K   +  G    +MM + + +P  + +  L+G +        
Sbjct: 131 FGPSVNTCI--EMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDM 190

Query: 261 SEFAFNQMRNFGIVCET-AYASMITIYTRMNLYDKAEEVIRFMQEDKVIPNLENWLVMLN 320
               F QM+  G       + ++I  + +    D A  ++  M+   +  ++  + V ++
Sbjct: 191 MLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCID 250

Query: 321 AYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDAAQRLFLGIKNSGVEP 380
           ++ + GK++ A   F  +E  G   + + Y ++I    KA+ +D A  +F  ++ +   P
Sbjct: 251 SFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVP 310

Query: 381 DETTYRSMIEGWGRAGNYKMAEWYYKELKRKGYMPNASNLFTLINLQAKHEDEAGALKTL 440
               Y +MI G+G AG +  A    +  + KG +P+      ++    K      ALK  
Sbjct: 311 CTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVF 370

Query: 441 NDMLKIGCRPSSIVGNVLQAYEKARRIKSVPTLLTGSFYRKVLSSQTSCSILVMAYVKHC 500
            +M K      S    ++    +A ++ +   L        +  +  + +I+V    K  
Sbjct: 371 EEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQ 430

Query: 501 LVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLPKRENKPNLHITC 560
            +D+A  +  E ++K    +E  +  LI    ++G +++A K+Y ++   + + N  +  
Sbjct: 431 KLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYT 490

Query: 561 TMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAFNVVVRMFVKAGSLEDACSVLDLMDEQ 620
           ++I  +   GR  DG K+Y  + +     DL   N  +    KAG  E   ++ + +  +
Sbjct: 491 SLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKAR 550

Query: 621 QDIVPDIYLFRDMLRIYQRCGMVHKLADLYYRILKSGVTWDQEMYNCVINCCSRALPVDE 680
           +  VPD   +  ++    + G  ++  +L+Y + + G   D   YN VI+   +   V++
Sbjct: 551 R-FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNK 610

Query: 681 LSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQ-KRGLVDVISYNTMIS 740
             +L +EM   GF P  VT   ++D   K     +A  LF  A+ KR  ++V+ Y+++I 
Sbjct: 611 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 670

Query: 741 AYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRMQESSSER 800
            +GK          ++++   G + +L  +N +LDA  K  ++       Q M+E     
Sbjct: 671 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 730

Query: 801 DHYTYNIMINIYGEQGWIDEVAEVLSELKACGLEPDLYSYNTLIKAYGIAGMVEEAARLV 860
           +  TY I+IN   +    ++      E++  G++P   SY T+I     AG + EA  L 
Sbjct: 731 NQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALF 790

Query: 861 KEMREKRIEPDRITYINMIRALQRNDQFLEA 889
              +     PD   Y  MI  L   ++ ++A
Sbjct: 791 DRFKANGGVPDSACYNAMIEGLSNGNRAMDA 816

BLAST of Lsi06G010780 vs. TAIR10
Match: AT5G02860.1 (AT5G02860.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 198.4 bits (503), Expect = 1.9e-50
Identity = 147/628 (23.41%), Postives = 284/628 (45.22%), Query Frame = 1

Query: 275 ETAYASMITIYTRMNLYDKAEEVIR----FMQEDKVIPNLENWLV--MLNAYCQQGKMEE 334
           E+  + ++     +  + K +  +R    FM++      L+N +V  +++   ++G++  
Sbjct: 132 ESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSS 191

Query: 335 AELVFASMEEAGFSSNIIAYNTLITGYGKASNMDAAQRLFLGIKNSGVEPDETTYRSMIE 394
           A  +F  ++E GFS ++ +Y +LI+ +  +     A  +F  ++  G +P   TY  ++ 
Sbjct: 192 AANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILN 251

Query: 395 GWGRAGN-YKMAEWYYKELKRKGYMPNASNLFTLINLQAKHEDEAGALKTLNDMLKIGCR 454
            +G+ G  +       +++K  G  P+A    TLI    +      A +   +M   G  
Sbjct: 252 VFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFS 311

Query: 455 PSSIVGN-VLQAYEKARRIKSVPTLLTGSFYRKVLSSQTSCSILVMAYVKHCLVDDALKV 514
              +  N +L  Y K+ R K    +L          S  + + L+ AY +  ++D+A+++
Sbjct: 312 YDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMEL 371

Query: 515 LREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLPKRENKPNLHITCTMIDIYSI 574
             +   K    +   Y  L+   +  G +E+A+ I+ ++     KPN+      I +Y  
Sbjct: 372 KNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGN 431

Query: 575 MGRFSDGEKLYLSLRSSGIPLDLIAFNVVVRMFVKAGSLEDACSVLDLMDEQQDIVPDIY 634
            G+F++  K++  +   G+  D++ +N ++ +F + G   +   V   M ++   VP+  
Sbjct: 432 RGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM-KRAGFVPERE 491

Query: 635 LFRDMLRIYQRCGMVHKLADLYYRILKSGVTWDQEMYNCVINCCSRALPVDELSRLFDEM 694
            F  ++  Y RCG   +   +Y R+L +GVT D   YN V+   +R    ++  ++  EM
Sbjct: 492 TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM 551

Query: 695 LQCGFAPNTVTLNVMLDVYGKSK----LFTKARNLF-GLAQKRGLVDVISYNTMISAYGK 754
                 PN +T   +L  Y   K    + + A  ++ G+ + R ++      T++    K
Sbjct: 552 EDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVL----LKTLVLVCSK 611

Query: 755 NKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRMQESSSERDHYT 814
                       ++K  GFS  +   N M+  YG+   +     VL  M+E        T
Sbjct: 612 CDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMAT 671

Query: 815 YNIMINIYGEQGWIDEVAEVLSELKACGLEPDLYSYNTLIKAYGIAGMVEEAARLVKEMR 874
           YN ++ ++       +  E+L E+ A G++PD+ SYNT+I AY     + +A+R+  EMR
Sbjct: 672 YNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMR 731

Query: 875 EKRIEPDRITYINMIRALQRNDQFLEAI 890
              I PD ITY   I +   +  F EAI
Sbjct: 732 NSGIVPDVITYNTFIGSYAADSMFEEAI 754

BLAST of Lsi06G010780 vs. TAIR10
Match: AT4G31850.1 (AT4G31850.1 proton gradient regulation 3)

HSP 1 Score: 198.4 bits (503), Expect = 1.9e-50
Identity = 174/746 (23.32%), Postives = 341/746 (45.71%), Query Frame = 1

Query: 145  LEKCNDSKTLG----FFEWMRSNGKLEHNVSAYNLVLRVLGRQQEWDAAEKLIREVRAEL 204
            L++ +D++ L     F+  M  +G +  +V  + +++  L +   +  A   + +V  + 
Sbjct: 335  LDRFSDNRDLDSVKQFWSEMEKDGHVP-DVVTFTILVDALCKAGNFGEAFDTL-DVMRDQ 394

Query: 205  GSQLDFQVFNTLIYACYKLGLVERGTKWFRMMLECQVQPNVATFGMLMGLYQKGCDIKES 264
            G   +   +NTLI    ++  ++   + F  M    V+P   T+ + +  Y K  D   +
Sbjct: 395  GILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSA 454

Query: 265  EFAFNQMRNFGIVCETAYASMITIYT--RMNLYDKAEEVIRFMQEDKVIPNLENWLVMLN 324
               F +M+  GI      A   ++Y+  +     +A+++   +++  ++P+   + +M+ 
Sbjct: 455  LETFEKMKTKGIA-PNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMK 514

Query: 325  AYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDAAQRLFLGIKNSGVEP 384
             Y + G+++EA  + + M E G   ++I  N+LI    KA  +D A ++F+ +K   ++P
Sbjct: 515  CYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 574

Query: 385  DETTYRSMIEGWGRAGNYKMAEWYYKELKRKGYMPNASNLFTLINLQAKHEDEAGALKTL 444
               TY +++ G G+ G  + A   ++ + +KG  PN     TL +   K+++   ALK L
Sbjct: 575  TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 634

Query: 445  NDMLKIGCRPSSIVGN-VLQAYEKARRIKSVPTLLTGSFYRKVLSSQTSCSILVMAYVKH 504
              M+ +GC P     N ++    K  ++K           + V     +   L+   VK 
Sbjct: 635  FKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFF-HQMKKLVYPDFVTLCTLLPGVVKA 694

Query: 505  CLVDDALKVLREKEWKDHHFEENLY-HLLICSCKELGHLENAIKIYTQLPKRENKPNLHI 564
             L++DA K++    +       NL+   LI S      ++NA+    +L       +   
Sbjct: 695  SLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDS 754

Query: 565  TCTMIDIYSIMGRFSDGEKLYLS--LRSSGIPLDLIAFNVVVRMFVKAGSLEDACSVLDL 624
                I  YS       G +       +  G+   L  +N+++   ++A  +E A  V  L
Sbjct: 755  ILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVF-L 814

Query: 625  MDEQQDIVPDIYLFRDMLRIYQRCGMVHKLADLYYRILKSGVTWDQEMYNCVINCCSRAL 684
              +    +PD+  +  +L  Y + G + +L +LY  +       +   +N VI+   +A 
Sbjct: 815  QVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAG 874

Query: 685  PVDE-LSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLF-GLAQKRGLVDVISY 744
             VD+ L   +D M    F+P   T   ++D   KS    +A+ LF G+       +   Y
Sbjct: 875  NVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIY 934

Query: 745  NTMISAYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRMQE 804
            N +I+ +GK  +     +  ++M   G    L+ Y+ ++D      +++      + ++E
Sbjct: 935  NILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKE 994

Query: 805  SSSERDHYTYNIMINIYGEQGWIDEVAEVLSELKAC-GLEPDLYSYNTLIKAYGIAGMVE 864
            S    D   YN++IN  G+   ++E   + +E+K   G+ PDLY+YN+LI   GIAGMVE
Sbjct: 995  SGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVE 1054

Query: 865  EAARLVKEMREKRIEPDRITYINMIR 878
            EA ++  E++   +EP+  T+  +IR
Sbjct: 1055 EAGKIYNEIQRAGLEPNVFTFNALIR 1075

BLAST of Lsi06G010780 vs. TAIR10
Match: AT5G39980.1 (AT5G39980.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 174.9 bits (442), Expect = 2.3e-43
Identity = 134/549 (24.41%), Postives = 260/549 (47.36%), Query Frame = 1

Query: 145 LEKCND-SKTLGFFEWMRSNGKLEHNVSAYNLVLRVLGRQQEWDAAEKLIREVRAELGSQ 204
           L + ND  ++L   +W+    K   +V AYN+VLR + R +++D A  L  E+R    + 
Sbjct: 129 LSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAP 188

Query: 205 LDFQVFNTLIYACYKLGLVERGTKWFRMMLECQVQPNVATFGMLMGLYQKGCDIKESEFA 264
            D   ++TLI +  K G+ +    W + M + +V  ++  +  L+ L ++ CD  ++   
Sbjct: 189 -DRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISI 248

Query: 265 FNQMRNFGIVCE-TAYASMITIYTRMNLYDKAEEVIRFMQEDKVIPNLENWLVMLNAYCQ 324
           F++++  GI  +  AY SMI +Y +  L+ +A  +I+ M E  V+PN  ++  +L+ Y +
Sbjct: 249 FSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVE 308

Query: 325 QGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDAAQRLFLGIKNSGVEPDETT 384
             K  EA  VFA M+E   + ++   N +I  YG+   +  A RLF  ++   +EP+  +
Sbjct: 309 NHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVS 368

Query: 385 YRSMIEGWGRAGNYKMAEWYYKELKRKGYMPNASNLFTLINLQAKHEDEAGALKTLNDML 444
           Y +++  +G A  +  A   ++ ++RK    N     T+I +  K  +   A   + +M 
Sbjct: 369 YNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQ 428

Query: 445 KIGCRPSSIV-GNVLQAYEKARRIKSVPTLLTGSFYRKVLSSQTSCSILVMAYVKHCLVD 504
             G  P++I    ++  + KA ++    TL        V   Q     +++AY +  L+ 
Sbjct: 429 SRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMG 488

Query: 505 DALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLPKRENKPNLHITCTMI 564
            A ++L E +  D+   E    +L     + G  E A  ++ Q  +     ++ +   MI
Sbjct: 489 HAKRLLHELKLPDNIPRETAITIL----AKAGRTEEATWVFRQAFESGEVKDISVFGCMI 548

Query: 565 DIYSIMGRFSDGEKLYLSLRSSGIPLDLIAFNVVVRMFVKAGSLEDACSVLDLMDEQQDI 624
           ++YS   R+ +  +++  +R++G   D     +V+  + K    E A +V   M E+  +
Sbjct: 549 NLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCV 608

Query: 625 VPDIYLFRDMLRIYQRCGMVHKLADLYYRILKSGVTWDQEMYNCVINCCSRALPVDELSR 684
            PD   F+ ML +Y        +  L+ R+        +E++  V     RA  +++ SR
Sbjct: 609 FPDEVHFQ-MLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERADKLNDASR 668

Query: 685 LFDEMLQCG 691
           + + M + G
Sbjct: 669 VMNRMRERG 671

BLAST of Lsi06G010780 vs. NCBI nr
Match: gi|659086251|ref|XP_008443835.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Cucumis melo])

HSP 1 Score: 1682.9 bits (4357), Expect = 0.0e+00
Identity = 837/900 (93.00%), Postives = 865/900 (96.11%), Query Frame = 1

Query: 1   MASLKLSSSLHSFDSKKFDFPVNSALFSDCCSVFSITGYIHLNKSCILYSLARVHKPSKL 60
           MASLKLS SLHSFDS KFDFPVNS   SD CS+FSI GYIHLNKSCILYSLARVHKPSK+
Sbjct: 1   MASLKLSFSLHSFDSNKFDFPVNSPPLSDYCSLFSINGYIHLNKSCILYSLARVHKPSKV 60

Query: 61  SEVEPEASDVSQSKFSVDGIDARKKSFGSKKHSKRAPGSYFSFSRNCSEKVFDNILFNGG 120
           S+VEPEASDVSQS+F  D ID+RKK F +KK SKRA GS+FSFSRNCSEK+F+NILF+GG
Sbjct: 61  SQVEPEASDVSQSRF--DDIDSRKKYFTAKKPSKRAAGSHFSFSRNCSEKIFENILFSGG 120

Query: 121 ELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLEHNVSAYNLVLRVL 180
           ELDVNYSTISSDLSLE CNAILKRLEKCNDSKTL FFEWMRSNGKL+HNVSAYNLVLRVL
Sbjct: 121 ELDVNYSTISSDLSLEGCNAILKRLEKCNDSKTLDFFEWMRSNGKLKHNVSAYNLVLRVL 180

Query: 181 GRQQEWDAAEKLIREVRAELGSQLDFQVFNTLIYACYKLGLVERGTKWFRMMLECQVQPN 240
           GRQ++WDAAEKLI+EVRAELGSQLDFQVFNTLIYACYK G VE GTKWFRMMLECQVQPN
Sbjct: 181 GRQEDWDAAEKLIKEVRAELGSQLDFQVFNTLIYACYKSGFVEWGTKWFRMMLECQVQPN 240

Query: 241 VATFGMLMGLYQKGCDIKESEFAFNQMRNFGIVCETAYASMITIYTRMNLYDKAEEVIRF 300
           VATFGMLMGLYQK CDI+ESEFAFNQMRNFGIVCETAYASMITIY RMNLYDKAEEVI+ 
Sbjct: 241 VATFGMLMGLYQKSCDIEESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQL 300

Query: 301 MQEDKVIPNLENWLVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASN 360
           MQ+DKVIPNLENWLVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASN
Sbjct: 301 MQKDKVIPNLENWLVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASN 360

Query: 361 MDAAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRKGYMPNASNLFT 420
           MD AQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRKGYMPN+SNLFT
Sbjct: 361 MDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRKGYMPNSSNLFT 420

Query: 421 LINLQAKHEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYEKARRIKSVPTLLTGSFYRKV 480
           LINLQAKHEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYEKARRIKSVP LLTGSFYRKV
Sbjct: 421 LINLQAKHEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYEKARRIKSVPVLLTGSFYRKV 480

Query: 481 LSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIK 540
           LSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGH E+AIK
Sbjct: 481 LSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHFESAIK 540

Query: 541 IYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAFNVVVRMFV 600
           IY Q PKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIA+NVVVRM+V
Sbjct: 541 IYAQRPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYV 600

Query: 601 KAGSLEDACSVLDLMDEQQDIVPDIYLFRDMLRIYQRCGMVHKLADLYYRILKSGVTWDQ 660
           KAGSLEDACSVLDLM EQQDIVPD+YL RDMLRIYQRCGMVHKL+DLYYRILKSGV+WDQ
Sbjct: 601 KAGSLEDACSVLDLMAEQQDIVPDVYLLRDMLRIYQRCGMVHKLSDLYYRILKSGVSWDQ 660

Query: 661 EMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGL 720
           EMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLF KARNLFG 
Sbjct: 661 EMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFAKARNLFGF 720

Query: 721 AQKRGLVDVISYNTMISAYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQM 780
           AQKRGLVD ISYNTMIS YGKNKDFKNMSSTVQ+MKFNGFSVSLEAYNCMLDAYGKECQM
Sbjct: 721 AQKRGLVDAISYNTMISVYGKNKDFKNMSSTVQQMKFNGFSVSLEAYNCMLDAYGKECQM 780

Query: 781 ENFRSVLQRMQESSSERDHYTYNIMINIYGEQGWIDEVAEVLSELKACGLEPDLYSYNTL 840
           ENFRSVLQRMQES+SE DHYTYNIMINIYGE+GWIDEVAEVL+ELKACGLEPDLYSYNTL
Sbjct: 781 ENFRSVLQRMQESTSECDHYTYNIMINIYGERGWIDEVAEVLTELKACGLEPDLYSYNTL 840

Query: 841 IKAYGIAGMVEEAARLVKEMREKRIEPDRITYINMIRALQRNDQFLEAIKWSLWMKQMKY 900
           IKAYGIAGMVEEAARLVKEMREK IEPDRITYINMIRALQRNDQFLEAIKWSLWMKQMKY
Sbjct: 841 IKAYGIAGMVEEAARLVKEMREKGIEPDRITYINMIRALQRNDQFLEAIKWSLWMKQMKY 898

BLAST of Lsi06G010780 vs. NCBI nr
Match: gi|449457967|ref|XP_004146719.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Cucumis sativus])

HSP 1 Score: 1675.2 bits (4337), Expect = 0.0e+00
Identity = 837/900 (93.00%), Postives = 864/900 (96.00%), Query Frame = 1

Query: 1   MASLKLSSSLHSFDSKKFDFPVNSALFSDCCSVFSITGYIHLNKSCILYSLARVHKPSKL 60
           MASLKLS SLHSFDS KFDFP+NS L SD CS+FSI  ++HLNKS I+YSLARVHKPSK+
Sbjct: 1   MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV 60

Query: 61  SEVEPEASDVSQSKFSVDGIDARKKSFGSKKHSKRAPGSYFSFSRNCSEKVFDNILFNGG 120
           S+VE +ASDVSQS+F  D I ARKK F SKK SKRA GS+FSFSRNC+    DNILFNGG
Sbjct: 61  SQVEQDASDVSQSRF--DEIVARKKYFTSKKPSKRAAGSHFSFSRNCN----DNILFNGG 120

Query: 121 ELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLEHNVSAYNLVLRVL 180
           ELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKL+HNVSAYNLVLRVL
Sbjct: 121 ELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVL 180

Query: 181 GRQQEWDAAEKLIREVRAELGSQLDFQVFNTLIYACYKLGLVERGTKWFRMMLECQVQPN 240
           GRQ++WDAAEKLI EVRAELGSQLDFQVFNTLIYACYK   VE+GTKWFRMMLECQVQPN
Sbjct: 181 GRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPN 240

Query: 241 VATFGMLMGLYQKGCDIKESEFAFNQMRNFGIVCETAYASMITIYTRMNLYDKAEEVIRF 300
           VATFGMLMGLYQK CDIKESEFAFNQMRNFGIVCETAYASMITIY RMNLYDKAEEVI+ 
Sbjct: 241 VATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQL 300

Query: 301 MQEDKVIPNLENWLVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASN 360
           MQEDKVIPNLENW+VMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASN
Sbjct: 301 MQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASN 360

Query: 361 MDAAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRKGYMPNASNLFT 420
           MD AQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKR+GYMPN+SNLFT
Sbjct: 361 MDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFT 420

Query: 421 LINLQAKHEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYEKARRIKSVPTLLTGSFYRKV 480
           LINLQAKHEDEAG LKTLNDMLKIGCRPSSIVGNVLQAYEKARR+KSVP LLTGSFYRKV
Sbjct: 421 LINLQAKHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKV 480

Query: 481 LSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIK 540
           LSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIK
Sbjct: 481 LSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIK 540

Query: 541 IYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAFNVVVRMFV 600
           IYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIA+NVVVRM+V
Sbjct: 541 IYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYV 600

Query: 601 KAGSLEDACSVLDLMDEQQDIVPDIYLFRDMLRIYQRCGMVHKLADLYYRILKSGVTWDQ 660
           KAGSLEDACSVLDLM EQQDIVPDIYL RDMLRIYQRCGMVHKLADLYYRILKSGV+WDQ
Sbjct: 601 KAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQ 660

Query: 661 EMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGL 720
           EMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGL
Sbjct: 661 EMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGL 720

Query: 721 AQKRGLVDVISYNTMISAYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQM 780
           AQKRGLVD ISYNTMIS YGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQM
Sbjct: 721 AQKRGLVDAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQM 780

Query: 781 ENFRSVLQRMQESSSERDHYTYNIMINIYGEQGWIDEVAEVLSELKACGLEPDLYSYNTL 840
           ENFRSVLQRMQE+SSE DHYTYNIMINIYGEQGWIDEVAEVL+ELKACGLEPDLYSYNTL
Sbjct: 781 ENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTL 840

Query: 841 IKAYGIAGMVEEAARLVKEMREKRIEPDRITYINMIRALQRNDQFLEAIKWSLWMKQMKY 900
           IKAYGIAGMVEEAA+LVKEMREKRIEPDRITYINMIRALQRNDQFLEA+KWSLWMKQMKY
Sbjct: 841 IKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKWSLWMKQMKY 894

BLAST of Lsi06G010780 vs. NCBI nr
Match: gi|645275895|ref|XP_008243032.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Prunus mume])

HSP 1 Score: 1241.5 bits (3211), Expect = 0.0e+00
Identity = 626/917 (68.27%), Postives = 749/917 (81.68%), Query Frame = 1

Query: 1   MASLKLSSSLHSFDS-KKFDFPVNSALFSDCCSVFSITGYIHLNKSCILYSLARVH---- 60
           M SL+ S SL +FDS KKF+F   SA+ S C        Y H++++ ++ S  RV     
Sbjct: 1   MTSLRFSVSLETFDSSKKFNF---SAVNSLC--------YSHVSRASVVNSSNRVSGFKF 60

Query: 61  KPSKLSEV----EPEASDVSQSKFSVD------GIDAR----KKSFGSKKHSKRAPGSYF 120
           + S +SE+    E     +S +K  VD       +D R    K S G K   KR      
Sbjct: 61  ELSSISELNQMSEETTLSLSSNKNRVDESLAEQNLDFRQASVKGSRGPKNEVKREKDLKS 120

Query: 121 SFSRNCSEKVFDNILFNGGELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMR 180
           S  ++   +  +N+  N GELDV+YS I SDLSLE CN ILKRLEKC+D KTL FFEWMR
Sbjct: 121 SSRKSRWVRELENLFVNDGELDVDYSVIGSDLSLEHCNDILKRLEKCSDVKTLRFFEWMR 180

Query: 181 SNGKLEHNVSAYNLVLRVLGRQQEWDAAEKLIREVRAELGSQLDFQVFNTLIYACYKLGL 240
           SNGKLE NVSA+NLVLRV+GR+++WD AEKL++EV A+LG +L++QVFNTLIYAC KLG 
Sbjct: 181 SNGKLERNVSAFNLVLRVMGRREDWDGAEKLVQEVIADLGCELNYQVFNTLIYACCKLGR 240

Query: 241 VERGTKWFRMMLECQVQPNVATFGMLMGLYQKGCDIKESEFAFNQMRNFGIVCETAYASM 300
           +E G KWFRMMLE  VQPN+ATFGMLM LYQKG  ++E+EF F QMRNFGI+C++AY+SM
Sbjct: 241 LELGGKWFRMMLEHGVQPNIATFGMLMVLYQKGWSVEEAEFTFFQMRNFGILCQSAYSSM 300

Query: 301 ITIYTRMNLYDKAEEVIRFMQEDKVIPNLENWLVMLNAYCQQGKMEEAELVFASMEEAGF 360
           ITIYTR+NL++KAEE+I  ++ED+V  NL+NWLVM+NAYCQQGK+++AELV  SM+EAGF
Sbjct: 301 ITIYTRLNLFEKAEEIIGLLKEDRVRLNLDNWLVMINAYCQQGKVDDAELVLVSMQEAGF 360

Query: 361 SSNIIAYNTLITGYGKASNMDAAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEW 420
           S NIIAYNTLITGYGKAS MDAA  LF GIKN+G+EPDETTYRSMIEGWGRA NYK AEW
Sbjct: 361 SPNIIAYNTLITGYGKASKMDAADHLFQGIKNAGLEPDETTYRSMIEGWGRADNYKEAEW 420

Query: 421 YYKELKRKGYMPNASNLFTLINLQAKHEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYEK 480
           YYKELKR GY PN+SNL+TLINLQAKHEDE GA++TL+DML +GC+ SSI+G +LQAYEK
Sbjct: 421 YYKELKRLGYKPNSSNLYTLINLQAKHEDEEGAIRTLDDMLTMGCQYSSILGTLLQAYEK 480

Query: 481 ARRIKSVPTLLTGSFYRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENL 540
           A R+  VP LL GSFY+ +L SQTSCSILVMAYVKHCLVDD +KV+REK WKD  FE+NL
Sbjct: 481 AGRVDKVPRLLRGSFYQHILVSQTSCSILVMAYVKHCLVDDTMKVVREKLWKDPPFEDNL 540

Query: 541 YHLLICSCKELGHLENAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLR 600
           YHLLICSCKELGHLENA+KIY Q+P+ ++KPN+HI CTMIDIY IMG F++ EK+Y+ L+
Sbjct: 541 YHLLICSCKELGHLENAVKIYKQMPRYDDKPNMHIMCTMIDIYIIMGLFTEAEKIYVELK 600

Query: 601 SSGIPLDLIAFNVVVRMFVKAGSLEDACSVLDLMDEQQDIVPDIYLFRDMLRIYQRCGMV 660
           SSG+ LD+IA+++ VRM+VKAG+L+DACSVLD MD+Q+ IVPDIY+FRDMLRIYQRCG +
Sbjct: 601 SSGVTLDMIAYSIAVRMYVKAGALKDACSVLDTMDKQEGIVPDIYMFRDMLRIYQRCGRL 660

Query: 661 HKLADLYYRILKSGVTWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVM 720
            KL DLYY++LKSGVTWDQEMYNCVINCCSRALPVDE+S +FDEMLQ GF PNT+T NVM
Sbjct: 661 DKLKDLYYKLLKSGVTWDQEMYNCVINCCSRALPVDEISEIFDEMLQRGFVPNTITFNVM 720

Query: 721 LDVYGKSKLFTKARNLFGLAQKRGLVDVISYNTMISAYGKNKDFKNMSSTVQKMKFNGFS 780
           LDVYGK+KL  KAR LF +AQK GLVD+ISYNT+I+AYG+NKD +NMSST  +M+F GFS
Sbjct: 721 LDVYGKAKLLKKARKLFWMAQKWGLVDMISYNTIIAAYGRNKDLRNMSSTFGEMQFKGFS 780

Query: 781 VSLEAYNCMLDAYGKECQMENFRSVLQRMQESSSERDHYTYNIMINIYGEQGWIDEVAEV 840
           VSLEAYN MLDAYGKE QME FRSVLQRM+E+S   DHYTYNIMINIYGEQGWIDEVA+V
Sbjct: 781 VSLEAYNTMLDAYGKESQMEIFRSVLQRMKETSCASDHYTYNIMINIYGEQGWIDEVADV 840

Query: 841 LSELKACGLEPDLYSYNTLIKAYGIAGMVEEAARLVKEMREKRIEPDRITYINMIRALQR 899
           L+ELK CGL PDL SYNTLIKAYGIAGMVE+A  LVKEMRE  I+PD+ITYIN+I AL++
Sbjct: 841 LTELKECGLGPDLCSYNTLIKAYGIAGMVEDAVHLVKEMRENGIQPDKITYINLINALRK 900

BLAST of Lsi06G010780 vs. NCBI nr
Match: gi|694354337|ref|XP_009358409.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Pyrus x bretschneideri])

HSP 1 Score: 1232.2 bits (3187), Expect = 0.0e+00
Identity = 608/901 (67.48%), Postives = 734/901 (81.47%), Query Frame = 1

Query: 1   MASLKLSSSLHSFDSKK---FDFPVNSALFSDCCSVFSITGYIHLNKSCILYSLARVHKP 60
           M SL+ S SL +FDS       F  +    S  C V ++     +  S + + L+   + 
Sbjct: 2   MTSLRFSISLETFDSSNKLNSSFCYSHVNVSRACVVNALNWGNRIKVSGLPFELSGTSEL 61

Query: 61  SKLSEVEPEASDVSQSKFSVDGIDARKKSFGSKKHSKRAPGSYFSFSRNCSEKVFDNILF 120
           +++ E    +      +F  +   + K S G KK S+R  G   S  ++   +  +N+  
Sbjct: 62  NQMGEETNLSLVEGNPEFRHE---SEKGSGGPKKESRREKGLKLSSRKSRWVRELENLYV 121

Query: 121 NGGELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLEHNVSAYNLVL 180
           NGGE DV+YS ISS LSLE CN IL+RLE+C+D K L FFEWMRSNGKLE NVSA+N VL
Sbjct: 122 NGGEFDVDYSVISSHLSLEHCNDILRRLERCSDVKALRFFEWMRSNGKLERNVSAFNSVL 181

Query: 181 RVLGRQQEWDAAEKLIREVRAELGSQLDFQVFNTLIYACYKLGLVERGTKWFRMMLECQV 240
           RV+GR+++WDAAEKL++E+ A LG +L++QVFNTLIYAC KLG  E G KWFRMML+ ++
Sbjct: 182 RVMGRREDWDAAEKLVQELLAGLGGELNYQVFNTLIYACCKLGRAELGAKWFRMMLDHRI 241

Query: 241 QPNVATFGMLMGLYQKGCDIKESEFAFNQMRNFGIVCETAYASMITIYTRMNLYDKAEEV 300
           QPN+ATFGMLMGLYQKG +++E+EF F+QMRN GIVC++AY++MITIYTR+NLYDKAEEV
Sbjct: 242 QPNIATFGMLMGLYQKGWNVEEAEFTFSQMRNCGIVCQSAYSAMITIYTRINLYDKAEEV 301

Query: 301 IRFMQEDKVIPNLENWLVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGK 360
           I  M+ED+V  NL+NWLVM+NAYCQQGK+++AE+V  SM+EAGFS NIIAYNTLITGYGK
Sbjct: 302 IGLMREDRVRLNLDNWLVMINAYCQQGKVDDAEVVLVSMQEAGFSPNIIAYNTLITGYGK 361

Query: 361 ASNMDAAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRKGYMPNASN 420
           AS MDAA  LFLGIKN+G+EPDETTYRSMIEGWGRA  YK A+WYYKELKR GY PN+SN
Sbjct: 362 ASKMDAAHHLFLGIKNAGLEPDETTYRSMIEGWGRADKYKEAKWYYKELKRLGYKPNSSN 421

Query: 421 LFTLINLQAKHEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYEKARRIKSVPTLLTGSFY 480
           L+TLINLQAKHEDE GA++TL+DML +GC+ SSI+G +LQAYEK  R+  VP LL GSFY
Sbjct: 422 LYTLINLQAKHEDEEGAIRTLDDMLTMGCQYSSILGTLLQAYEKVGRVDKVPRLLRGSFY 481

Query: 481 RKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLEN 540
           + +L SQTSCSILVMAYVKHCLVDD +KVLREK WKD  FE+NLYHLLICSCKELG LE+
Sbjct: 482 QHILVSQTSCSILVMAYVKHCLVDDTMKVLREKLWKDPPFEDNLYHLLICSCKELGRLED 541

Query: 541 AIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAFNVVVR 600
           A+KIY Q+P+  NKPN+HI CTMIDIYSIM  F++ EK Y+ L+SSG  LDLIA+++ VR
Sbjct: 542 AVKIYKQMPRHFNKPNMHIMCTMIDIYSIMSLFTEAEKTYVELKSSGNVLDLIAYSIAVR 601

Query: 601 MFVKAGSLEDACSVLDLMDEQQDIVPDIYLFRDMLRIYQRCGMVHKLADLYYRILKSGVT 660
           M+VKAGSLEDACSVL+ M+EQ+ IVPDIY+FRDMLRIYQRCG + KL DLYY++LKSGVT
Sbjct: 602 MYVKAGSLEDACSVLEAMEEQEGIVPDIYMFRDMLRIYQRCGRLDKLKDLYYKLLKSGVT 661

Query: 661 WDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNL 720
           WD+EMYNCVINCCS ALPVDE+S +FDEMLQCGF PNT+T NVMLDVYGK++L  KAR L
Sbjct: 662 WDREMYNCVINCCSHALPVDEISEIFDEMLQCGFVPNTITFNVMLDVYGKARLLKKAREL 721

Query: 721 FGLAQKRGLVDVISYNTMISAYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKE 780
           F +AQK GLVD+ISYNT+I+AYG+NKDF++MSST Q+M+F GFSVSLEAYN MLDAYGKE
Sbjct: 722 FRMAQKWGLVDMISYNTIIAAYGRNKDFRSMSSTFQEMQFKGFSVSLEAYNSMLDAYGKE 781

Query: 781 CQMENFRSVLQRMQESSSERDHYTYNIMINIYGEQGWIDEVAEVLSELKACGLEPDLYSY 840
            QME FRS+LQRM+++S   DHYTYNIMINIYGEQGWIDEVA VL+ELK CGL PDL SY
Sbjct: 782 SQMERFRSILQRMKKTSCASDHYTYNIMINIYGEQGWIDEVAGVLTELKECGLGPDLCSY 841

Query: 841 NTLIKAYGIAGMVEEAARLVKEMREKRIEPDRITYINMIRALQRNDQFLEAIKWSLWMKQ 899
           NTLIKAYGIAGMVE+A  LVKEMRE  +EPD+ITY+N+I ALQRND++LEA+KWSLWMKQ
Sbjct: 842 NTLIKAYGIAGMVEDAVHLVKEMRENGVEPDKITYVNLIAALQRNDEYLEAVKWSLWMKQ 899

BLAST of Lsi06G010780 vs. NCBI nr
Match: gi|658003538|ref|XP_008394283.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Malus domestica])

HSP 1 Score: 1231.5 bits (3185), Expect = 0.0e+00
Identity = 611/901 (67.81%), Postives = 732/901 (81.24%), Query Frame = 1

Query: 1   MASLKLSSSLHSFDSK-KFDFPV--NSALFSDCCSVFSITGYIHLNKSCILYSLARVHKP 60
           M SL+ S SL +FDS  KF+       A  S  C V ++     +  S   + L+   + 
Sbjct: 2   MTSLRFSISLDTFDSSNKFNSSXCYGHAXVSRACVVNALNWGNRIKVSGFPFELSGTSEL 61

Query: 61  SKLSEVEPEASDVSQSKFSVDGIDARKKSFGSKKHSKRAPGSYFSFSRNCSEKVFDNILF 120
           S++ E    +       F  +   + K S G KK  +R   S  S  ++   +  +N+  
Sbjct: 62  SQMGEEXNLSLVEGNPDFRHE---SEKGSGGPKKEXRREKXSKLSSRKSRWVRELENLFV 121

Query: 121 NGGELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLEHNVSAYNLVL 180
           NGGE DV+YS ISS LS+E CN IL+RLE+CND K L FFEWMRSNGKLE NVSA+N VL
Sbjct: 122 NGGEFDVDYSVISSHLSMEHCNDILRRLERCNDVKALRFFEWMRSNGKLERNVSAFNSVL 181

Query: 181 RVLGRQQEWDAAEKLIREVRAELGSQLDFQVFNTLIYACYKLGLVERGTKWFRMMLECQV 240
           RV GR+++WDAAEKL++E+ A LG +L++QVFNTLIYAC KLG  E G KWFRMML+ ++
Sbjct: 182 RVXGRREDWDAAEKLVQELLAGLGGELNYQVFNTLIYACCKLGRAELGAKWFRMMLDHRI 241

Query: 241 QPNVATFGMLMGLYQKGCDIKESEFAFNQMRNFGIVCETAYASMITIYTRMNLYDKAEEV 300
           QPN+ATFGMLMGLYQKG +++E+EF F+QMRN GIVC++AY++MITIYTR+NLYDKAEEV
Sbjct: 242 QPNIATFGMLMGLYQKGWNVEEAEFTFSQMRNCGIVCQSAYSAMITIYTRLNLYDKAEEV 301

Query: 301 IRFMQEDKVIPNLENWLVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGK 360
           I  M+ED+V  NL+NWLVM+NAYCQQGK+++AE+V  SM+EAGFS NIIAYNTLITGYGK
Sbjct: 302 IGLMREDRVRLNLDNWLVMINAYCQQGKVDDAEVVLVSMQEAGFSPNIIAYNTLITGYGK 361

Query: 361 ASNMDAAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRKGYMPNASN 420
           AS MDAA  LFLGIKN+G+EPDETTYRSMIEGWGRA  YK AEWYYKELKR GY PN+SN
Sbjct: 362 ASKMDAAHHLFLGIKNAGLEPDETTYRSMIEGWGRADKYKEAEWYYKELKRLGYKPNSSN 421

Query: 421 LFTLINLQAKHEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYEKARRIKSVPTLLTGSFY 480
           L+TL+NLQAKHEDE GA++TL+DML +GC+ SSI+G +LQAYEK  R+  VP LL GSFY
Sbjct: 422 LYTLVNLQAKHEDEEGAIRTLDDMLTMGCQYSSILGTLLQAYEKVGRVDKVPRLLRGSFY 481

Query: 481 RKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLEN 540
           + +L SQTSCSILVMAYVKHCLVDD +KVLREK WKD  FE+NLYHLLICSCKELG LE+
Sbjct: 482 QHILVSQTSCSILVMAYVKHCLVDDTMKVLREKLWKDPPFEDNLYHLLICSCKELGRLED 541

Query: 541 AIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAFNVVVR 600
           A+KIY Q+ +  NKPN+HI CTMIDIYSIMG F++ EK Y+ L+SSGI LDLIA+++ VR
Sbjct: 542 AVKIYKQMXRHFNKPNMHIMCTMIDIYSIMGLFTEAEKTYVELKSSGIVLDLIAYSIAVR 601

Query: 601 MFVKAGSLEDACSVLDLMDEQQDIVPDIYLFRDMLRIYQRCGMVHKLADLYYRILKSGVT 660
           M+VKAGSLEDACSVL+ M+EQ+ IVPDIY+FRDMLRIYQRCG + KL DLYY++LKSGVT
Sbjct: 602 MYVKAGSLEDACSVLEAMEEQEGIVPDIYMFRDMLRIYQRCGRLDKLKDLYYKLLKSGVT 661

Query: 661 WDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNL 720
           WD+EMYNCVINCCS ALPVDE+S +FDEMLQCGF PNT+T NVMLDVYGK++L  KAR L
Sbjct: 662 WDREMYNCVINCCSHALPVDEISEIFDEMLQCGFVPNTITFNVMLDVYGKARLLKKAREL 721

Query: 721 FGLAQKRGLVDVISYNTMISAYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKE 780
           F +AQK GLVD+ISYNT+I+AYG+NKDF++MSST Q+M+F GFSVSLEAYN MLDAYGKE
Sbjct: 722 FRMAQKWGLVDMISYNTIIAAYGRNKDFRSMSSTFQEMQFKGFSVSLEAYNSMLDAYGKE 781

Query: 781 CQMENFRSVLQRMQESSSERDHYTYNIMINIYGEQGWIDEVAEVLSELKACGLEPDLYSY 840
            QME FRSVLQRM+++S   DHYTYNIMIN+YGEQGWIDEVA VL+ELK C L PDL SY
Sbjct: 782 SQMERFRSVLQRMKKTSXASDHYTYNIMINVYGEQGWIDEVAGVLTELKECXLGPDLCSY 841

Query: 841 NTLIKAYGIAGMVEEAARLVKEMREKRIEPDRITYINMIRALQRNDQFLEAIKWSLWMKQ 899
           NTLIKAYGIAGMVE+A  LVKEMRE  IEPD+ITY+N+I ALQRND++LEA+KWSLWMKQ
Sbjct: 842 NTLIKAYGIAGMVEDAVHLVKEMRENGIEPDKITYVNLIAALQRNDEYLEAVKWSLWMKQ 899

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP342_ARATH0.0e+0061.86Pentatricopeptide repeat-containing protein At4g30825, chloroplastic OS=Arabidop... [more]
PP217_ARATH1.1e-5022.10Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana GN... [more]
PP362_ARATH3.4e-4923.41Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN... [more]
PP344_ARATH3.4e-4923.32Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidop... [more]
PP408_ARATH4.1e-4224.41Pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0LTR9_CUCSA0.0e+0093.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G257890 PE=4 SV=1[more]
B9SQY5_RICCO0.0e+0065.69Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... [more]
M5VU43_PRUPE0.0e+0075.13Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019391mg PE=4 S... [more]
V4UR41_9ROSI0.0e+0071.69Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007430mg PE=4 SV=1[more]
A0A067L3T5_JATCU0.0e+0064.99Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04067 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G30825.10.0e+0061.86 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G06920.16.0e-5222.10 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G02860.11.9e-5023.41 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT4G31850.11.9e-5023.32 proton gradient regulation 3[more]
AT5G39980.12.3e-4324.41 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659086251|ref|XP_008443835.1|0.0e+0093.00PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic ... [more]
gi|449457967|ref|XP_004146719.1|0.0e+0093.00PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic ... [more]
gi|645275895|ref|XP_008243032.1|0.0e+0068.27PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic ... [more]
gi|694354337|ref|XP_009358409.1|0.0e+0067.48PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic ... [more]
gi|658003538|ref|XP_008394283.1|0.0e+0067.81PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic ... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0007049cell cycle
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR004575MAT1/Tfb3
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006281 DNA repair
biological_process GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity
biological_process GO:0006357 regulation of transcription from RNA polymerase II promoter
biological_process GO:0007049 cell cycle
biological_process GO:0008150 biological_process
cellular_component GO:0005675 holo TFIIH complex
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G010780.1Lsi06G010780.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 208..236
score: 0.0015coord: 559..585
score: 0.39coord: 313..341
score: 3.3E-6coord: 277..305
score: 0.0076coord: 730..760
score: 7.2E-5coord: 486..509
score: 0.19coord: 591..617
score: 0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 344..389
score: 1.7E-11coord: 832..879
score: 1.2E-12coord: 662..705
score: 5.9E-8coord: 766..807
score: 4.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 766..798
score: 2.6E-5coord: 696..727
score: 0.0014coord: 591..625
score: 2.8E-6coord: 277..309
score: 3.2E-4coord: 800..833
score: 1.9E-7coord: 382..415
score: 0.0011coord: 662..695
score: 2.5E-6coord: 730..763
score: 3.3E-6coord: 314..344
score: 6.3E-7coord: 347..380
score: 1.1E-5coord: 208..241
score: 2.7E-4coord: 835..868
score: 7.3
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 518..552
score: 7.958coord: 309..343
score: 11.257coord: 694..724
score: 7.541coord: 833..867
score: 13.197coord: 553..587
score: 7.87coord: 624..658
score: 7.487coord: 414..448
score: 7.256coord: 274..308
score: 9.229coord: 379..413
score: 11.762coord: 763..797
score: 8.473coord: 798..832
score: 11.74coord: 240..270
score: 6.193coord: 205..239
score: 9.69coord: 483..517
score: 6.39coord: 868..900
score: 7.355coord: 169..199
score: 8.188coord: 344..378
score: 11.444coord: 588..618
score: 8.638coord: 659..693
score: 10.819coord: 728..762
score: 10
IPR004575Cdk-activating kinase assembly factor MAT1/Tfb3PANTHERPTHR12683FAMILY NOT NAMEDcoord: 91..900
score:
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 761..862
score: 3.0E-8coord: 169..298
score: 5.9E-4coord: 521..584
score: 3.0E-8coord: 311..431
score: 3.
NoneNo IPR availablePANTHERPTHR12683:SF10SUBFAMILY NOT NAMEDcoord: 91..900
score:
NoneNo IPR availableunknownSSF81901HCP-likecoord: 163..342
score: 4.71E-5coord: 318..446
score: 2.04E-6coord: 515..579
score: 2.0

The following gene(s) are paralogous to this gene:

None