Cla014012 (gene) Watermelon (97103) v1

NameCla014012
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr1 : 27329498 .. 27329959 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAACGTAGAGAAAAGCAGGGAAAGTGGATGGAATCCAGAAAGTTGGGACAAAAGGAATGAGATATGTTTCAGACAAATCTATGAACAGGATGCAAAAAATTATTACAGATCAACTCATACGACCAAACTAGACATGGAACAACCCACTGAAGATGAACCGGAAGCCACTAATGGAGCTGTGCAGATCATAAACGAGAATGAACTCGAACTAACTCTAGGGCCTTCAAGTTACAATACTTCAGATTCAGGAGTAACCACTCACTCTTCTTCTTCAACAGGGTCCAGCCATGAGGGAAGAAGATGTACGGATACAAAGAAAGTTAAAGGTCAAGAAATGGCGGTTTTTGGGGGAACTGAAAATTCCTCAGGCTACCAAAATGAAAGTAATAGAGGAGAGAAGAAGATGCTAGATTATCCTCCTTGGCTTTTTCAAGTTGTGAGCCTTAACATGACTTAA

mRNA sequence

ATGAAAAACGTAGAGAAAAGCAGGGAAAGTGGATGGAATCCAGAAAGTTGGGACAAAAGGAATGAGATATGTTTCAGACAAATCTATGAACAGGATGCAAAAAATTATTACAGATCAACTCATACGACCAAACTAGACATGGAACAACCCACTGAAGATGAACCGGAAGCCACTAATGGAGCTGTGCAGATCATAAACGAGAATGAACTCGAACTAACTCTAGGGCCTTCAAGTTACAATACTTCAGATTCAGGAGTAACCACTCACTCTTCTTCTTCAACAGGGTCCAGCCATGAGGGAAGAAGATGTACGGATACAAAGAAAGTTAAAGGTCAAGAAATGGCGGTTTTTGGGGGAACTGAAAATTCCTCAGGCTACCAAAATGAAAGTAATAGAGGAGAGAAGAAGATGCTAGATTATCCTCCTTGGCTTTTTCAAGTTGTGAGCCTTAACATGACTTAA

Coding sequence (CDS)

ATGAAAAACGTAGAGAAAAGCAGGGAAAGTGGATGGAATCCAGAAAGTTGGGACAAAAGGAATGAGATATGTTTCAGACAAATCTATGAACAGGATGCAAAAAATTATTACAGATCAACTCATACGACCAAACTAGACATGGAACAACCCACTGAAGATGAACCGGAAGCCACTAATGGAGCTGTGCAGATCATAAACGAGAATGAACTCGAACTAACTCTAGGGCCTTCAAGTTACAATACTTCAGATTCAGGAGTAACCACTCACTCTTCTTCTTCAACAGGGTCCAGCCATGAGGGAAGAAGATGTACGGATACAAAGAAAGTTAAAGGTCAAGAAATGGCGGTTTTTGGGGGAACTGAAAATTCCTCAGGCTACCAAAATGAAAGTAATAGAGGAGAGAAGAAGATGCTAGATTATCCTCCTTGGCTTTTTCAAGTTGTGAGCCTTAACATGACTTAA

Protein sequence

MKNVEKSRESGWNPESWDKRNEICFRQIYEQDAKNYYRSTHTTKLDMEQPTEDEPEATNGAVQIINENELELTLGPSSYNTSDSGVTTHSSSSTGSSHEGRRCTDTKKVKGQEMAVFGGTENSSGYQNESNRGEKKMLDYPPWLFQVVSLNMT
BLAST of Cla014012 vs. TrEMBL
Match: A0A0A0KIH1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G494990 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 7.6e-65
Identity = 131/154 (85.06%), Postives = 136/154 (88.31%), Query Frame = 1

Query: 1   MKNVEKSRESGWNPESWDKRNEICFRQIYEQDAKNYYRSTHTTKLDMEQPTEDEPEATN- 60
           MKNVEKSRE+    ESWDKRNEICFRQIYEQDAKNYYRST TTKLDMEQP EDEPE  N 
Sbjct: 42  MKNVEKSRET----ESWDKRNEICFRQIYEQDAKNYYRSTRTTKLDMEQPAEDEPETNNN 101

Query: 61  GAVQIINENELELTLGPSSYNTSDSGVTTHSSSSTGSSHEGRRCTDTKKVKGQEMAVFGG 120
           GA QIINE ELELTLGPSSYNTSDSG TT+SSSSTGSSH+ RRCTDTK+VKGQEMA  G 
Sbjct: 102 GARQIINETELELTLGPSSYNTSDSGTTTYSSSSTGSSHD-RRCTDTKQVKGQEMAALGV 161

Query: 121 TENSSGYQNESNRGEKKMLDYPPWLFQVVSLNMT 154
           TENSSG QN +NRGEKKMLDYPPWLFQVVSLNMT
Sbjct: 162 TENSSGCQNGNNRGEKKMLDYPPWLFQVVSLNMT 190

BLAST of Cla014012 vs. TrEMBL
Match: B9H6M7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s18940g PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.3e-16
Identity = 67/176 (38.07%), Postives = 97/176 (55.11%), Query Frame = 1

Query: 1   MKNVEKSRESGWNPESWDKRNEICFRQIYEQDAKNYYRSTHTTKLDMEQPTEDEPEATNG 60
           M+N+E SR    + E W  +N   F Q     A++  + +   +LD+E P+ED    +N 
Sbjct: 42  MRNIESSRPDERSRELWSYKNGFSFNQ--PNHARDMQQKS-IGRLDLEWPSEDCVAESNA 101

Query: 61  --AVQIINENELELTLGPSSYN---------TSDSGVTTHSSSSTGSSHEGRRC------ 120
              +++I E+E++LTLGPSSY+         TSDSG T+ SSSSTGSSH  R        
Sbjct: 102 DRVLELIEESEIQLTLGPSSYDRRKKPETPLTSDSG-TSLSSSSTGSSHINRTSSLKHQK 161

Query: 121 TDTKKVKGQEMAVFGGTENSSGYQNESNRG-------EKKMLDYPPWLFQVVSLNM 153
           T TK+ +  E+ +F   + + GYQNES +G        ++    PPWL QV+SLNM
Sbjct: 162 TSTKREECCELGIFQVPDMTLGYQNESKKGMGVEEQLRQERQKQPPWLCQVLSLNM 213

BLAST of Cla014012 vs. TrEMBL
Match: M5WSG6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024094mg PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.5e-15
Identity = 66/182 (36.26%), Postives = 92/182 (50.55%), Query Frame = 1

Query: 3   NVEKSRESGWNPESWDKRNEICFRQI-YEQDAKNYYRSTHTTKLDMEQPTED------EP 62
           ++ KSR  G   ESW+ +NE  F Q+ Y Q     +      KLD+EQP         E 
Sbjct: 45  SIGKSRPKGQKQESWNLKNETSFSQLNYHQHEAQQFNPQR--KLDLEQPAAAAEEYIAET 104

Query: 63  EATNGAVQIINENELELTLGPSSYN-----------------TSDSGVTTHSSSSTGSSH 122
           +  +G ++II+E+E+ELTLGP+ YN                 TSDSG  + SSSSTGSSH
Sbjct: 105 DGDDGVLEIIDESEIELTLGPTRYNNNTITTTNRRKRGEAPLTSDSG-PSFSSSSTGSSH 164

Query: 123 EGRRCTDT--KKVKGQEMAVFGGTENSSGYQNESNRGEKKM-----LDYPPWLFQVVSLN 154
             R  +    ++  GQ   +  G  N S   +  +  E+++     L  PPW FQV+SLN
Sbjct: 165 VNRTSSSRTHQRKHGQVPDMTSGYRNGSKNSSNIDPVEEQLRQDERLQLPPWFFQVLSLN 223

BLAST of Cla014012 vs. TrEMBL
Match: D7TT92_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0129g00370 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.0e-13
Identity = 64/179 (35.75%), Postives = 92/179 (51.40%), Query Frame = 1

Query: 1   MKNVEKSRESGWNPESWDKRNEICFRQIYEQDAKNYYRSTHTTKLDMEQPTEDEPEATNG 60
           MKN+E S  +G + E  +  N+I   QI  Q+           KLD+EQP E+     +G
Sbjct: 42  MKNIEVSGSNGQSQERLNS-NDISMNQINHQEKPRM-------KLDLEQPAEEYNAELDG 101

Query: 61  --AVQIINENELELTLGPSSYN---------TSDSGVTTHSSSSTGSSHEGRRCTDTKK- 120
              ++I++E++LELTLGP SY+         TSDSG  + SSSSTGSSH  R  + T K 
Sbjct: 102 DGVLEIVDESKLELTLGPVSYSRRKKAETPLTSDSG-PSFSSSSTGSSHMKRTNSRTPKR 161

Query: 121 -------VKGQEMAVFGGTENSSGYQNESNRG-------EKKMLDYPPWLFQVVSLNMT 154
                    G +  +F   +   G+Q+    G        ++ L+ PPW+ QV+SLNMT
Sbjct: 162 IDTTKEESNGHDWGLFNVPDMKPGFQSGRKNGFHVDEQLRQERLNQPPWIVQVLSLNMT 211

BLAST of Cla014012 vs. TrEMBL
Match: B9T4I8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0396190 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.8e-13
Identity = 65/192 (33.85%), Postives = 97/192 (50.52%), Query Frame = 1

Query: 1   MKNVEKSR-ESGWNPESWDKRNEICFRQIYEQDAKNYYRSTHTTKLDMEQPTEDEPEATN 60
           M+N+   R  +  + E W+ +N I F Q                KLD+E+P + +    +
Sbjct: 42  MRNIGSKRPNTQGSQELWNSKNSISFAQ------------KSIMKLDLERPADQDYAVES 101

Query: 61  G-----AVQIINENELELTLGPSSYN-----------TSDSGVTTHSSSSTGSSHEGRRC 120
                 A++II+E+E+ELTLGPSSYN           TSDSG ++ SSSSTGSSH  +  
Sbjct: 102 SGDHRAALEIIDESEIELTLGPSSYNRGNRKKRETPLTSDSGPSSFSSSSTGSSHINKTA 161

Query: 121 T--------DTKKVK----GQEMAVFGGTENSSG-YQNESNRG---------EKKMLDYP 154
           +        +TKK +    G+E+ +    + + G YQ+E+             ++ L  P
Sbjct: 162 SSLGHHKKMNTKKSEEASGGRELGIVQVPDMTLGNYQSENRTSSNIDVDEQLRQERLKQP 221

BLAST of Cla014012 vs. NCBI nr
Match: gi|659079633|ref|XP_008440360.1| (PREDICTED: uncharacterized protein LOC103484836 [Cucumis melo])

HSP 1 Score: 270.8 bits (691), Expect = 1.5e-69
Identity = 134/153 (87.58%), Postives = 138/153 (90.20%), Query Frame = 1

Query: 1   MKNVEKSRESGWNPESWDKRNEICFRQIYEQDAKNYYRSTHTTKLDMEQPTEDEPEATNG 60
           MKNVEKSRE+    ESWDKRNEICFRQIYEQDAKNYYRSTHTTKLDMEQP EDEPE  NG
Sbjct: 42  MKNVEKSRET----ESWDKRNEICFRQIYEQDAKNYYRSTHTTKLDMEQPAEDEPETNNG 101

Query: 61  AVQIINENELELTLGPSSYNTSDSGVTTHSSSSTGSSHEGRRCTDTKKVKGQEMAVFGGT 120
           A QIINE ELELTLGPSSYNTSDSG TT+SSSSTGSSHEGRRCTDTK+VKGQEMA  G T
Sbjct: 102 APQIINETELELTLGPSSYNTSDSGTTTYSSSSTGSSHEGRRCTDTKQVKGQEMAALGVT 161

Query: 121 ENSSGYQNESNRGEKKMLDYPPWLFQVVSLNMT 154
           ENSSG QN +NRGEKKMLDYPPWLFQVVSLNMT
Sbjct: 162 ENSSGCQNGNNRGEKKMLDYPPWLFQVVSLNMT 190

BLAST of Cla014012 vs. NCBI nr
Match: gi|778718594|ref|XP_004141880.2| (PREDICTED: uncharacterized protein LOC101207586 [Cucumis sativus])

HSP 1 Score: 254.6 bits (649), Expect = 1.1e-64
Identity = 131/154 (85.06%), Postives = 136/154 (88.31%), Query Frame = 1

Query: 1   MKNVEKSRESGWNPESWDKRNEICFRQIYEQDAKNYYRSTHTTKLDMEQPTEDEPEATN- 60
           MKNVEKSRE+    ESWDKRNEICFRQIYEQDAKNYYRST TTKLDMEQP EDEPE  N 
Sbjct: 42  MKNVEKSRET----ESWDKRNEICFRQIYEQDAKNYYRSTRTTKLDMEQPAEDEPETNNN 101

Query: 61  GAVQIINENELELTLGPSSYNTSDSGVTTHSSSSTGSSHEGRRCTDTKKVKGQEMAVFGG 120
           GA QIINE ELELTLGPSSYNTSDSG TT+SSSSTGSSH+ RRCTDTK+VKGQEMA  G 
Sbjct: 102 GARQIINETELELTLGPSSYNTSDSGTTTYSSSSTGSSHD-RRCTDTKQVKGQEMAALGV 161

Query: 121 TENSSGYQNESNRGEKKMLDYPPWLFQVVSLNMT 154
           TENSSG QN +NRGEKKMLDYPPWLFQVVSLNMT
Sbjct: 162 TENSSGCQNGNNRGEKKMLDYPPWLFQVVSLNMT 190

BLAST of Cla014012 vs. NCBI nr
Match: gi|1009145433|ref|XP_015890334.1| (PREDICTED: uncharacterized protein LOC107424944 [Ziziphus jujuba])

HSP 1 Score: 104.8 bits (260), Expect = 1.4e-19
Identity = 75/184 (40.76%), Postives = 99/184 (53.80%), Query Frame = 1

Query: 1   MKNVEKSRESGWNPESWDKRNEICFRQIYEQDAKNYYRSTHTTKLDMEQPTED--EPEAT 60
           M+N+EK+R    N E W  + EICF QI +    + +      KLD+EQP E+       
Sbjct: 42  MQNIEKNRS---NQERWSIKKEICFPQI-DHHHHHQHHDEAQRKLDLEQPAEEYIADSDG 101

Query: 61  NGAVQIINENELELTLGPSSYN----------TSDSGVTTHSSSSTGSSHEGR------- 120
           NG V++I+E+E+ELTLGP+SYN          TSDSG  + SSSSTGSSH  R       
Sbjct: 102 NGMVEMIDESEIELTLGPTSYNSRRRKSEAQLTSDSG-PSFSSSSTGSSHINRTISWTHH 161

Query: 121 ---RCTDTKK--VKGQEMAVFGGTENSSGYQNESNRG-------EKKMLDYPPWLFQVVS 154
              R  DT +  V G E+ +   T+ +SG QN S           ++ L   PWLFQV+S
Sbjct: 162 HHHRIRDTTRLGVNGCELGLVRVTDTTSGCQNSSKNNIDVEEQLRQERLKQSPWLFQVLS 220

BLAST of Cla014012 vs. NCBI nr
Match: gi|224081833|ref|XP_002306499.1| (hypothetical protein POPTR_0005s18940g [Populus trichocarpa])

HSP 1 Score: 94.4 bits (233), Expect = 1.9e-16
Identity = 67/176 (38.07%), Postives = 97/176 (55.11%), Query Frame = 1

Query: 1   MKNVEKSRESGWNPESWDKRNEICFRQIYEQDAKNYYRSTHTTKLDMEQPTEDEPEATNG 60
           M+N+E SR    + E W  +N   F Q     A++  + +   +LD+E P+ED    +N 
Sbjct: 42  MRNIESSRPDERSRELWSYKNGFSFNQ--PNHARDMQQKS-IGRLDLEWPSEDCVAESNA 101

Query: 61  --AVQIINENELELTLGPSSYN---------TSDSGVTTHSSSSTGSSHEGRRC------ 120
              +++I E+E++LTLGPSSY+         TSDSG T+ SSSSTGSSH  R        
Sbjct: 102 DRVLELIEESEIQLTLGPSSYDRRKKPETPLTSDSG-TSLSSSSTGSSHINRTSSLKHQK 161

Query: 121 TDTKKVKGQEMAVFGGTENSSGYQNESNRG-------EKKMLDYPPWLFQVVSLNM 153
           T TK+ +  E+ +F   + + GYQNES +G        ++    PPWL QV+SLNM
Sbjct: 162 TSTKREECCELGIFQVPDMTLGYQNESKKGMGVEEQLRQERQKQPPWLCQVLSLNM 213

BLAST of Cla014012 vs. NCBI nr
Match: gi|595843155|ref|XP_007208561.1| (hypothetical protein PRUPE_ppa024094mg [Prunus persica])

HSP 1 Score: 90.9 bits (224), Expect = 2.1e-15
Identity = 66/182 (36.26%), Postives = 92/182 (50.55%), Query Frame = 1

Query: 3   NVEKSRESGWNPESWDKRNEICFRQI-YEQDAKNYYRSTHTTKLDMEQPTED------EP 62
           ++ KSR  G   ESW+ +NE  F Q+ Y Q     +      KLD+EQP         E 
Sbjct: 45  SIGKSRPKGQKQESWNLKNETSFSQLNYHQHEAQQFNPQR--KLDLEQPAAAAEEYIAET 104

Query: 63  EATNGAVQIINENELELTLGPSSYN-----------------TSDSGVTTHSSSSTGSSH 122
           +  +G ++II+E+E+ELTLGP+ YN                 TSDSG  + SSSSTGSSH
Sbjct: 105 DGDDGVLEIIDESEIELTLGPTRYNNNTITTTNRRKRGEAPLTSDSG-PSFSSSSTGSSH 164

Query: 123 EGRRCTDT--KKVKGQEMAVFGGTENSSGYQNESNRGEKKM-----LDYPPWLFQVVSLN 154
             R  +    ++  GQ   +  G  N S   +  +  E+++     L  PPW FQV+SLN
Sbjct: 165 VNRTSSSRTHQRKHGQVPDMTSGYRNGSKNSSNIDPVEEQLRQDERLQLPPWFFQVLSLN 223

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KIH1_CUCSA7.6e-6585.06Uncharacterized protein OS=Cucumis sativus GN=Csa_6G494990 PE=4 SV=1[more]
B9H6M7_POPTR1.3e-1638.07Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s18940g PE=4 SV=1[more]
M5WSG6_PRUPE1.5e-1536.26Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024094mg PE=4 SV=1[more]
D7TT92_VITVI1.0e-1335.75Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0129g00370 PE=4 SV=... [more]
B9T4I8_RICCO1.8e-1333.85Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0396190 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659079633|ref|XP_008440360.1|1.5e-6987.58PREDICTED: uncharacterized protein LOC103484836 [Cucumis melo][more]
gi|778718594|ref|XP_004141880.2|1.1e-6485.06PREDICTED: uncharacterized protein LOC101207586 [Cucumis sativus][more]
gi|1009145433|ref|XP_015890334.1|1.4e-1940.76PREDICTED: uncharacterized protein LOC107424944 [Ziziphus jujuba][more]
gi|224081833|ref|XP_002306499.1|1.9e-1638.07hypothetical protein POPTR_0005s18940g [Populus trichocarpa][more]
gi|595843155|ref|XP_007208561.1|2.1e-1536.26hypothetical protein PRUPE_ppa024094mg [Prunus persica][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0016740 transferase activity
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU16990watermelon unigene v2 vs TrEMBLtranscribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla014012Cla014012.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU16990WMU16990transcribed_cluster


The following gene(s) are paralogous to this gene:

None