Carg18561 (gene) Silver-seed gourd

Overview
NameCarg18561
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionV-type sodium ATPase catalytic subunit A
LocationCucurbita_argyrosperma_scaffold_109 : 455054 .. 457089 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAGATTGGCTGGAATCTGACCCCAAACATCGCAGAACTTGGGGGACGTTTCTGTTCCTGTTCTTGTTCATGTTCATGTTCGTGTTCTTGTTCCCTTCTTTTTTTTTTCACTGGGTAAACGAGTGAGAATCTTTTTGTTTCAGCTCATATTATCTTCCTCTTTCCTTTATTTATTCACTATTGCTTTGAGCGGAATGGTGGAGTCCTCCATGTTCCATCGATTTCTGTGCAAACGGATTAGGATTTTCTTGCCGGAACTTCTTGGAGGATATGAAGTTTCTTCTTCTTCTTCTTCTTCTTCGTCATCCTCCTTTTCATCTTAGATTTTGACTTCTTTTGCAGTGTTCTGAAATATTGAAGTTCATGCCAAGCTGCAATTCCATCTGCTGATCGGTCGTTTGGATTACGGGTTATTGTTCAGGTAATTCTATAGGTTTTTTCGAGTTTGCTTTCGTTTTTTTCTTTTTGTTAGTCTTTCGATTGATCTGAGTTGAATTCGAGGTTCGATCCAACTTCGTCATTGTAATCTGTAATTAGTGGTGATCTTCGTTTGGTTTTAATGAATTACAGAGTTTCCATGGAAGCGAATTCTTTCGAGTATAATGATTTTTTTTTTTTTGTTTTGTTTTGTTTGGGAGTTGCGCATTAAGTGTTCGACGTAATGACTGAATGAGATAGGGAGTATTTTGGATAGCGAACAAAAGACCAATAAAACGTTATCACAAACTTTTATTCATTCGTACTGTACTCCTCTGTCCTCATTATAGAATTGCTACACAATACATAATTCGTAATGCCGTTGAACAGTGAAATGGCATATATTATATATTTATTTATTTATCAAACTCGAGACCTTTGGATTAATGATTTTTCAGGCAAGAATTTATTCCAGTAGCAGATTCTGAATTTCTGAGCCGCTTCCTTTTTTATTGATAGTCTTCTTTCTGTTTTTTCTCTCTTTATTCCTCAGATTAGATTCAAGACTGCATCAGCTAAAATCCCAATGGAAAAGCTGCCTGAGGTAAACGAAAAGGAGTTCATGAGGATGGCTATGTTAAAGCACGAAGAAACATTCAAACAACAGGTTTTTCCCCAATTTTGATCTTCAATTTGCCTTTCATTCTTTTGGTTTTGAGTTCAAAACAGCCATGCAATTATTGAACTGTTAAATGATGCATCTCTTCATTTTTTCCACTGGGTTTTTTCAATCTGCCCATCTTAACAAGATCTGATTCAACTGAATCCATAATTTTGATAGTATTTCCCTTTTTCTTTTAATGGGTGCTTTGAATTTTTTGTGCCATGGCAATGGATGGATTGGATTGATAGTCATTTTCCGTTTGGGTTTTTTTTTTCTTTTTCATATCATCACCTAATCTATTATTCATGTTCTAAGCTTGGGAAGGCATATTGTAGGTGCATGAACTTCATCGGCTTTATCGAATCCAAAAGACATTGATGAAAAACATGGAGAAAAACAGGCAAAGTGGATGGAATCCAGAGAGTTGGGATAAAAGGAATGAGATATGTTTCCGACAAATTTATGAACAGGATGCAAAAACTTACTATAGATCATCAACAACTCATTCGGTCAAAATAGATTTGGAACAGCCTGCTGAAGATGATCAAACAGAATCCAGCAGTGGAGCTCTGCAGACCATAAACGAGAACGAACTGGAACTTACTTTAGGGCCTTCGAGTTACAATACTTCAGATTCAGGAGTAACCCACTCTTCTTCTTCAACAGGGTCCAGCCATGAGGGAAGACGTAGGGATTCAAAGCAAGTACTTAAGGGTCAGGAAATGGAGGTGTTGGGAGTGATTGAAAATTCTTCAGGCTACCAAAATGGAAGTCATAGGGGTGAGAAGAAGATGATGCTGGATTACCCTCCTTGGCTTTTTCATGTTGTGAGCCCTAACATGACTTAATTTTCAAGGGGAAAAAAAAAATTATTTGAATGAAATTATATGAGAAGACCTTTGATTGCTTCTCATTGACTAATCAACAGGGGAAATTGATGTGTAGTTGTTTTTAA

mRNA sequence

GGAGATTGGCTGGAATCTGACCCCAAACATCGCAGAACTTGGGGGACGTTTCTGTTCCTGTTCTTGTTCATGTTCATGTTCGTGTTCTTGTTCCCTTCTTTTTTTTTTCACTGGGTAAACGAGTGAGAATCTTTTTGTTTCAGCTCATATTATCTTCCTCTTTCCTTTATTTATTCACTATTGCTTTGAGCGGAATGGTGGAGTCCTCCATGTTCCATCGATTTCTGTGCAAACGGATTAGGATTTTCTTGCCGGAACTTCTTGGAGGATATGAAGTTTCTTCTTCTTCTTCTTCTTCTTCGTCATCCTCCTTTTCATCTTAGATTTTGACTTCTTTTGCAGTGTTCTGAAATATTGAAGTTCATGCCAAGCTGCAATTCCATCTGCTGATCGGTCGTTTGGATTACGGGTTATTGTTCAGATTAGATTCAAGACTGCATCAGCTAAAATCCCAATGGAAAAGCTGCCTGAGGTAAACGAAAAGGAGTTCATGAGGATGGCTATGTTAAAGCACGAAGAAACATTCAAACAACAGGTGCATGAACTTCATCGGCTTTATCGAATCCAAAAGACATTGATGAAAAACATGGAGAAAAACAGGCAAAGTGGATGGAATCCAGAGAGTTGGGATAAAAGGAATGAGATATGTTTCCGACAAATTTATGAACAGGATGCAAAAACTTACTATAGATCATCAACAACTCATTCGGTCAAAATAGATTTGGAACAGCCTGCTGAAGATGATCAAACAGAATCCAGCAGTGGAGCTCTGCAGACCATAAACGAGAACGAACTGGAACTTACTTTAGGGCCTTCGAGTTACAATACTTCAGATTCAGGAGTAACCCACTCTTCTTCTTCAACAGGGTCCAGCCATGAGGGAAGACGTAGGGATTCAAAGCAAGTACTTAAGGGTCAGGAAATGGAGGTGTTGGGAGTGATTGAAAATTCTTCAGGCTACCAAAATGGAAGTCATAGGGGTGAGAAGAAGATGATGCTGGATTACCCTCCTTGGCTTTTTCATGTTGTGAGCCCTAACATGACTTAATTTTCAAGGGGAAAAAAAAAATTATTTGAATGAAATTATATGAGAAGACCTTTGATTGCTTCTCATTGACTAATCAACAGGGGAAATTGATGTGTAGTTGTTTTTAA

Coding sequence (CDS)

ATGGAAAAGCTGCCTGAGGTAAACGAAAAGGAGTTCATGAGGATGGCTATGTTAAAGCACGAAGAAACATTCAAACAACAGGTGCATGAACTTCATCGGCTTTATCGAATCCAAAAGACATTGATGAAAAACATGGAGAAAAACAGGCAAAGTGGATGGAATCCAGAGAGTTGGGATAAAAGGAATGAGATATGTTTCCGACAAATTTATGAACAGGATGCAAAAACTTACTATAGATCATCAACAACTCATTCGGTCAAAATAGATTTGGAACAGCCTGCTGAAGATGATCAAACAGAATCCAGCAGTGGAGCTCTGCAGACCATAAACGAGAACGAACTGGAACTTACTTTAGGGCCTTCGAGTTACAATACTTCAGATTCAGGAGTAACCCACTCTTCTTCTTCAACAGGGTCCAGCCATGAGGGAAGACGTAGGGATTCAAAGCAAGTACTTAAGGGTCAGGAAATGGAGGTGTTGGGAGTGATTGAAAATTCTTCAGGCTACCAAAATGGAAGTCATAGGGGTGAGAAGAAGATGATGCTGGATTACCCTCCTTGGCTTTTTCATGTTGTGAGCCCTAACATGACTTAA

Protein sequence

MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNRQSGWNPESWDKRNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGPSSYNTSDSGVTHSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSHRGEKKMMLDYPPWLFHVVSPNMT
Homology
[Close]
BLAST of Carg18561 vs. NCBI nr
Match: XP_023517031.1 (uncharacterized protein LOC111780910 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 381.3 bits (978), Expect = 1.9e-102
Identity = 194/197 (98.48%), Postives = 195/197 (98.98%), Query Frame = 0 

Query: 1   MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNRQSGWNPESWDK 60
           MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYR QKTLMKNMEK+RQSGWNPESWDK
Sbjct: 1   MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRTQKTLMKNMEKSRQSGWNPESWDK 60

Query: 61  RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP 120
           RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP
Sbjct: 61  RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP 120

Query: 121 SSYNTSDSGVTHSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSHRGEKKM 180
           SSYNTSDSGVTHSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSHRGEKKM
Sbjct: 121 SSYNTSDSGVTHSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSHRGEKKM 180

Query: 181 MLDYPPWLFHVVSPNMT 198
           MLDYPPWLF VVSPNMT
Sbjct: 181 MLDYPPWLFQVVSPNMT 197

[Close]
BLAST of Carg18561 vs. NCBI nr
Match: XP_022963328.1 (uncharacterized protein LOC111463569 [Cucurbita moschata] >XP_022963329.1 uncharacterized protein LOC111463569 [Cucurbita moschata])

HSP 1 Score: 377.5 bits (968), Expect = 2.8e-101
Identity = 192/197 (97.46%), Postives = 193/197 (97.97%), Query Frame = 0 

Query: 1   MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNRQSGWNPESWDK 60
           MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYR QKTLMKNMEKNRQSGWNPESWDK
Sbjct: 1   MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRTQKTLMKNMEKNRQSGWNPESWDK 60

Query: 61  RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP 120
           RNEICFRQIYEQDAKTYYRSST HSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP
Sbjct: 61  RNEICFRQIYEQDAKTYYRSSTIHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP 120

Query: 121 SSYNTSDSGVTHSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSHRGEKKM 180
           SSYNTSDSGVTHSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSH+GEKKM
Sbjct: 121 SSYNTSDSGVTHSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSHKGEKKM 180

Query: 181 MLDYPPWLFHVVSPNMT 198
            LDYPPWLF VVSPNMT
Sbjct: 181 TLDYPPWLFQVVSPNMT 197

[Close]
BLAST of Carg18561 vs. NCBI nr
Match: XP_023003698.1 (uncharacterized protein LOC111497211 [Cucurbita maxima] >XP_023003699.1 uncharacterized protein LOC111497211 [Cucurbita maxima])

HSP 1 Score: 366.3 bits (939), Expect = 6.5e-98
Identity = 189/197 (95.94%), Postives = 192/197 (97.46%), Query Frame = 0 

Query: 1   MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNRQSGWNPESWDK 60
           MEKLPEV EKEFMRMAMLKHEETFKQQVHELHRLYR QKTLMKNMEK+RQSGWNPESWDK
Sbjct: 1   MEKLPEVYEKEFMRMAMLKHEETFKQQVHELHRLYRTQKTLMKNMEKSRQSGWNPESWDK 60

Query: 61  RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP 120
           RNEICFRQIY+QDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINE ELELTLGP
Sbjct: 61  RNEICFRQIYKQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINEPELELTLGP 120

Query: 121 SSYNTSDSGVTHSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSHRGEKKM 180
           SSYNTSDSGVTHSSSSTGSSHEGRRRDSKQV KGQEMEVLGVIENSSGYQNGSHRGEKKM
Sbjct: 121 SSYNTSDSGVTHSSSSTGSSHEGRRRDSKQV-KGQEMEVLGVIENSSGYQNGSHRGEKKM 180

Query: 181 MLDYPPWLFHVVSPNMT 198
           MLDYPPW+F VVSPNMT
Sbjct: 181 MLDYPPWIFQVVSPNMT 196

[Close]
BLAST of Carg18561 vs. NCBI nr
Match: XP_022949937.1 (uncharacterized protein LOC111453182 [Cucurbita moschata] >XP_022949938.1 uncharacterized protein LOC111453182 [Cucurbita moschata] >XP_022949939.1 uncharacterized protein LOC111453182 [Cucurbita moschata] >XP_022949940.1 uncharacterized protein LOC111453182 [Cucurbita moschata])

HSP 1 Score: 295.0 bits (754), Expect = 1.8e-76
Identity = 159/199 (79.90%), Postives = 176/199 (88.44%), Query Frame = 0 

Query: 1   MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNRQSGWNPESWDK 60
           MEKLP+ +EKE+MRMAMLKHEETFKQQVHELHRLYR QKTLMKN+EK+R SGWNP+SWDK
Sbjct: 1   MEKLPKAHEKEYMRMAMLKHEETFKQQVHELHRLYRTQKTLMKNVEKSRDSGWNPKSWDK 60

Query: 61  RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP 120
           RNEICFRQIYEQDAK Y R STT + K+DLEQPAE D+ E+++GALQ INENELELTLGP
Sbjct: 61  RNEICFRQIYEQDAKNYSR-STTQTTKLDLEQPAE-DEAEANNGALQIINENELELTLGP 120

Query: 121 SSYNTSDSGV-THSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSHRGEKK 180
           SSYNTSDSG+ THSSSSTGSSHEGRR D KQV +GQEM VLGV EN SG+QNGS RGEKK
Sbjct: 121 SSYNTSDSGITTHSSSSTGSSHEGRRMDRKQV-RGQEMAVLGVPENPSGFQNGSDRGEKK 180

Query: 181 MM-LDYPPWLFHVVSPNMT 198
           M+ +DYPPWLF  VS NMT
Sbjct: 181 MVEVDYPPWLFQAVSLNMT 196

[Close]
BLAST of Carg18561 vs. NCBI nr
Match: XP_023543361.1 (uncharacterized protein LOC111803264 [Cucurbita pepo subsp. pepo] >XP_023543362.1 uncharacterized protein LOC111803264 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 292.7 bits (748), Expect = 9.1e-76
Identity = 158/199 (79.40%), Postives = 175/199 (87.94%), Query Frame = 0 

Query: 1   MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNRQSGWNPESWDK 60
           MEKLP+ +EKE+MRMAMLKHEETFKQQVHELHRLYR QKTLMK +EK+R SGWNP+SWDK
Sbjct: 1   MEKLPKAHEKEYMRMAMLKHEETFKQQVHELHRLYRTQKTLMKTVEKSRDSGWNPKSWDK 60

Query: 61  RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP 120
           RNEICFRQIYEQDAK Y R STT + K+DLEQPAE D+ E+++GALQ INENELELTLGP
Sbjct: 61  RNEICFRQIYEQDAKNYCR-STTQTTKLDLEQPAE-DEAEANNGALQIINENELELTLGP 120

Query: 121 SSYNTSDSGV-THSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSHRGEKK 180
           SSYNTSDSG+ THSSSSTGSSHEGRR D KQV +GQEM VLGV EN SG+QNGS RGEKK
Sbjct: 121 SSYNTSDSGITTHSSSSTGSSHEGRRMDRKQV-RGQEMAVLGVPENPSGFQNGSDRGEKK 180

Query: 181 MM-LDYPPWLFHVVSPNMT 198
           M+ +DYPPWLF  VS NMT
Sbjct: 181 MVEVDYPPWLFQAVSLNMT 196

[Close]
BLAST of Carg18561 vs. TAIR10
Match: AT5G67390.1 (unknown protein)

HSP 1 Score: 73.6 bits (179), Expect = 1.6e-13
Identity = 52/123 (42.28%), Postives = 73/123 (59.35%), Query Frame = 0 

Query: 1   MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNRQSGWNPESWDK 60
           MEKL    +K+ M+MAMLKHEETFKQQV+ELHRLY++QK LMKNME N+ +        K
Sbjct: 1   MEKLLNPYDKQCMKMAMLKHEETFKQQVYELHRLYQVQKILMKNMEINKFT-------TK 60

Query: 61  RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP 120
            N +           T+ R      V  ++++PA        +  ++ ++E+E+ELTLGP
Sbjct: 61  NNHV------NSGLGTFIR-----RVDNEIDRPA---NFSGGNNNIEIMDESEIELTLGP 102

Query: 121 SSY 124
           S Y
Sbjct: 121 SCY 102

[Close]
BLAST of Carg18561 vs. TAIR10
Match: AT1G26620.1 (Plant protein of unknown function (DUF863))

HSP 1 Score: 50.4 bits (119), Expect = 1.4e-06
Identity = 23/38 (60.53%), Postives = 31/38 (81.58%), Query Frame = 0 

Query: 9  EKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNME 47
          EK+FM+  ML+HE  FK QVHELHRLYR+QK L++ ++
Sbjct: 14 EKDFMKHTMLEHEAVFKNQVHELHRLYRVQKNLVEEVK 51

[Close]
BLAST of Carg18561 vs. TAIR10
Match: AT1G69360.1 (Plant protein of unknown function (DUF863))

HSP 1 Score: 46.2 bits (108), Expect = 2.7e-05
Identity = 21/38 (55.26%), Postives = 30/38 (78.95%), Query Frame = 0 

Query: 9  EKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNME 47
          E++F++  ML+HE  FK QV+ELHRLYR QK+LM  ++
Sbjct: 56 ERDFLKQTMLEHEAVFKNQVYELHRLYRTQKSLMAEVK 93

[Close]
BLAST of Carg18561 vs. TAIR10
Match: AT5G07790.1 (unknown protein)

HSP 1 Score: 43.1 bits (100), Expect = 2.3e-04
Identity = 23/42 (54.76%), Postives = 28/42 (66.67%), Query Frame = 0 

Query: 10  KEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNRQS 52
           KE +R  ML HE  F+ Q+ ELHRLYR QK LM  ME+ R +
Sbjct: 59  KEALRHTMLVHESVFESQICELHRLYRKQKELMMEMEETRHN 100

[Close]
BLAST of Carg18561 vs. TrEMBL
Match: tr|A0A1S3B1P5|A0A1S3B1P5_CUCME (uncharacterized protein LOC103484836 OS=Cucumis melo OX=3656 GN=LOC103484836 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 2.4e-69
Identity = 154/199 (77.39%), Postives = 171/199 (85.93%), Query Frame = 0 

Query: 1   MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNRQSGWNPESWDK 60
           MEKLP+  EKE+MRMAMLKHEETFKQQVHELHRLYR QKTLMKN+EK+R++    ESWDK
Sbjct: 1   MEKLPKAYEKEYMRMAMLKHEETFKQQVHELHRLYRTQKTLMKNVEKSRET----ESWDK 60

Query: 61  RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP 120
           RNEICFRQIYEQDAK YYRS  TH+ K+D+EQPAE D+ E+++GA Q INE ELELTLGP
Sbjct: 61  RNEICFRQIYEQDAKNYYRS--THTTKLDMEQPAE-DEPETNNGAPQIINETELELTLGP 120

Query: 121 SSYNTSDSG-VTHSSSSTGSSHEGRR-RDSKQVLKGQEMEVLGVIENSSGYQNGSHRGEK 180
           SSYNTSDSG  T+SSSSTGSSHEGRR  D+KQV KGQEM  LGV ENSSG QNG++RGEK
Sbjct: 121 SSYNTSDSGTTTYSSSSTGSSHEGRRCTDTKQV-KGQEMAALGVTENSSGCQNGNNRGEK 180

Query: 181 KMMLDYPPWLFHVVSPNMT 198
           K MLDYPPWLF VVS NMT
Sbjct: 181 K-MLDYPPWLFQVVSLNMT 190

[Close]
BLAST of Carg18561 vs. TrEMBL
Match: tr|A0A0A0KIH1|A0A0A0KIH1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G494990 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 3.0e-67
Identity = 148/198 (74.75%), Postives = 166/198 (83.84%), Query Frame = 0 

Query: 1   MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNRQSGWNPESWDK 60
           MEKLP+  EKE+MRMAMLKHEETFKQQV ELHRLYR QKTLMKN+EK+R++    ESWDK
Sbjct: 1   MEKLPKAYEKEYMRMAMLKHEETFKQQVQELHRLYRTQKTLMKNVEKSRET----ESWDK 60

Query: 61  RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP 120
           RNEICFRQIYEQDAK YYRS  T + K+D+EQPAED+   +++GA Q INE ELELTLGP
Sbjct: 61  RNEICFRQIYEQDAKNYYRS--TRTTKLDMEQPAEDEPETNNNGARQIINETELELTLGP 120

Query: 121 SSYNTSDSG-VTHSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSHRGEKK 180
           SSYNTSDSG  T+SSSSTGSSH+ R  D+KQV KGQEM  LGV ENSSG QNG++RGEKK
Sbjct: 121 SSYNTSDSGTTTYSSSSTGSSHDRRCTDTKQV-KGQEMAALGVTENSSGCQNGNNRGEKK 180

Query: 181 MMLDYPPWLFHVVSPNMT 198
            MLDYPPWLF VVS NMT
Sbjct: 181 -MLDYPPWLFQVVSLNMT 190

[Close]
BLAST of Carg18561 vs. TrEMBL
Match: tr|A0A2P4KXP9|A0A2P4KXP9_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_51416 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.1e-34
Identity = 104/215 (48.37%), Postives = 135/215 (62.79%), Query Frame = 0 

Query: 1   MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNRQSGWNPESWDK 60
           MEKL E  ++E MRMAMLKHEETFKQQV+ELHRLY+IQK LMKNME +R +GW+ E W+ 
Sbjct: 1   MEKLVESYDRECMRMAMLKHEETFKQQVYELHRLYQIQKMLMKNMESSRPNGWSQELWNL 60

Query: 61  RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTES-SSGALQTINENELELTLG 120
           +NE+ F Q           +      K+DLEQPAE+   ES  +G L+ I+E+E+ELTLG
Sbjct: 61  KNELSFNQTNHNRG-----AQQKPQRKLDLEQPAEEYIAESGGNGVLEIIDESEIELTLG 120

Query: 121 PSSYN---------TSDSGVTHSSSSTGSSHEGRRRD--SKQVLKGQEMEVLGVIENSSG 180
           PSSYN         TSDSG + SSSSTGSSH  R     ++Q L G E  ++ V + + G
Sbjct: 121 PSSYNRRKKPETPLTSDSGPSFSSSSTGSSHINRTSSYTTRQELNGHEPRLVQVPDMTLG 180

Query: 181 YQNGSHRG---EKKM---MLDYPPWLFHVVSPNMT 198
           YQ+ S      E+++    L+ P W F V+S N T
Sbjct: 181 YQSRSKNNIDVEEQLRQDRLNQPSWFFQVLSLNTT 210

[Close]
BLAST of Carg18561 vs. TrEMBL
Match: tr|A0A2N9IUM4|A0A2N9IUM4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55741 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.4e-32
Identity = 103/223 (46.19%), Postives = 137/223 (61.43%), Query Frame = 0 

Query: 1   MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNRQSGWNPESWDK 60
           MEKL +  ++E MRMAMLKHEETFKQQV+ELHRLY+IQK LMKNME +R +GW+ E W+ 
Sbjct: 1   MEKLTKPYDRECMRMAMLKHEETFKQQVYELHRLYQIQKMLMKNMESSRPNGWSQELWNL 60

Query: 61  RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESS-SGALQTINEN--ELELT 120
           +NE+ F Q        +         K+DLE+PAE+   +S+  G L+ I+E+  E+ELT
Sbjct: 61  KNELSFNQTNHDHGAQH----KPQIKKLDLERPAEEYIADSNGDGVLEIIDESEIEIELT 120

Query: 121 LGPSSYN---------TSDSGVTHSSSSTGSSHEGR-------RRD-SKQVLKGQEMEVL 180
           LGPSSYN         TSDSG + SSSSTGSSH  R       R+D ++Q L G E  ++
Sbjct: 121 LGPSSYNRMKKPETPLTSDSGPSFSSSSTGSSHINRTSSWTHKRKDTTRQELNGHEPRLV 180

Query: 181 GVIENSSGYQNGSHRG------EKKMMLDYPPWLFHVVSPNMT 198
            V + + GYQ+ S          ++  L+ P W F V+S NMT
Sbjct: 181 QVPDMTIGYQSRSSNNIDVEEQFRQDRLNQPSWFFQVLSLNMT 219

[Close]
BLAST of Carg18561 vs. TrEMBL
Match: tr|A0A1Q3ASM7|A0A1Q3ASM7_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_02261 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.6e-31
Identity = 101/213 (47.42%), Postives = 128/213 (60.09%), Query Frame = 0 

Query: 1   MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNRQSGWNPESWDK 60
           MEKL    +KE+MRMAMLKHEETFK+QV+ELHRLYRIQK LMKN+E  + +G N E W  
Sbjct: 1   MEKLLNPYDKEYMRMAMLKHEETFKEQVYELHRLYRIQKLLMKNIESRKPNGRNWELWSS 60

Query: 61  RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESS-SGALQTINENELELTLG 120
            N I  R         Y+  +    VK+DLEQPA++   ES+ +GAL+ I+E+E+ELTLG
Sbjct: 61  NNGIDTRH-----DGCYHDLTLKSIVKLDLEQPADEYIAESNDNGALEIIDESEIELTLG 120

Query: 121 PSSYN---------TSDSGVTHSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSS--- 180
           P SY           SDSG + SSSSTGSSH  R        +    E LG+++ S    
Sbjct: 121 PKSYPRRRNPETPLNSDSGPSFSSSSTGSSHINRTNFRCHQRRDTTREELGLVQISKVTP 180

Query: 181 GYQNGSHRGEKKM---MLDYPPWLFHVVSPNMT 198
           GY   S   E+++    L  PPWLF V+S NMT
Sbjct: 181 GYHKSSVEIEEQLRQERLKQPPWLFQVLSLNMT 208

The following BLAST results are available for this feature:
BLAST of Carg18561 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023517031.11.9e-10298.48uncharacterized protein LOC111780910 [Cucurbita pepo subsp. pepo][more]
XP_022963328.12.8e-10197.46uncharacterized protein LOC111463569 [Cucurbita moschata] >XP_022963329.1 unchar... [more]
XP_023003698.16.5e-9895.94uncharacterized protein LOC111497211 [Cucurbita maxima] >XP_023003699.1 uncharac... [more]
XP_022949937.11.8e-7679.90uncharacterized protein LOC111453182 [Cucurbita moschata] >XP_022949938.1 unchar... [more]
XP_023543361.19.1e-7679.40uncharacterized protein LOC111803264 [Cucurbita pepo subsp. pepo] >XP_023543362.... [more]
BLAST of Carg18561 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G67390.11.6e-1342.28unknown protein[more]
AT1G26620.11.4e-0660.53Plant protein of unknown function (DUF863)[more]
AT1G69360.12.7e-0555.26Plant protein of unknown function (DUF863)[more]
AT5G07790.12.3e-0454.76unknown protein[more]
BLAST of Carg18561 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg18561 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B1P5|A0A1S3B1P5_CUCME2.4e-6977.39uncharacterized protein LOC103484836 OS=Cucumis melo OX=3656 GN=LOC103484836 PE=... [more]
tr|A0A0A0KIH1|A0A0A0KIH1_CUCSA3.0e-6774.75Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G494990 PE=4 SV=1[more]
tr|A0A2P4KXP9|A0A2P4KXP9_QUESU1.1e-3448.37Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_51416 PE=4 SV=1[more]
tr|A0A2N9IUM4|A0A2N9IUM4_FAGSY1.4e-3246.19Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55741 PE=4 SV=1[more]
tr|A0A1Q3ASM7|A0A1Q3ASM7_CEPFO2.6e-3147.42Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_02261 PE=4... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg18561-RACarg18561-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..152
NoneNo IPR availablePANTHERPTHR33167:SF4GB|AAF67766.1coord: 1..179
NoneNo IPR availablePANTHERPTHR33167FAMILY NOT NAMEDcoord: 1..179

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg18561Cla014012Watermelon (97103) v1carwmB0005
Carg18561Csa6G494990Cucumber (Chinese Long) v2carcuB0003
Carg18561MELO3C007617Melon (DHL92) v3.5.1carmeB0002
Carg18561ClCG01G017390Watermelon (Charleston Gray)carwcgB0002
Carg18561CSPI06G28730Wild cucumber (PI 183967)carcpiB0003
Carg18561Cucsa.103020Cucumber (Gy14) v1carcgyB0001
Carg18561CmaCh07G006610Cucurbita maxima (Rimu)carcmaB0004
Carg18561CmaCh03G009350Cucurbita maxima (Rimu)carcmaB0003
Carg18561CmoCh03G009650Cucurbita moschata (Rifu)carcmoB0004
Carg18561Lsi01G009120Bottle gourd (USVL1VR-Ls)carlsiB001
Carg18561Cp4.1LG10g02240Cucurbita pepo (Zucchini)carcpeB0001
Carg18561Cp4.1LG19g10710Cucurbita pepo (Zucchini)carcpeB0002
Carg18561CsGy6G028210Cucumber (Gy14) v2carcgybB0003
Carg18561MELO3C007617.2Melon (DHL92) v3.6.1carmedB0003
Carg18561CsaV3_6G043920Cucumber (Chinese Long) v3carcucB0003
Carg18561Cla97C01G016560Watermelon (97103) v2carwmbB0002
Carg18561Bhi03G000773Wax gourdcarwgoB0003
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg18561Carg00803Silver-seed gourdcarcarB001
The following block(s) are covering this gene:
GeneOrganismBlock
Carg18561Cucumber (Chinese Long) v3carcucB0001
Carg18561Bottle gourd (USVL1VR-Ls)carlsiB003
Carg18561Melon (DHL92) v3.5.1carmeB0001
Carg18561Melon (DHL92) v3.6.1carmedB0001
Carg18561Watermelon (Charleston Gray)carwcgB0003
Carg18561Watermelon (97103) v1carwmB0004
Carg18561Watermelon (97103) v2carwmbB0003
Carg18561Wax gourdcarwgoB0001
Carg18561Cucumber (Gy14) v2carcgybB0001
Carg18561Cucumber (Gy14) v1carcgyB0003
Carg18561Cucurbita maxima (Rimu)carcmaB0002
Carg18561Cucurbita moschata (Rifu)carcmoB0005
Carg18561Wild cucumber (PI 183967)carcpiB0001
Carg18561Cucumber (Chinese Long) v2carcuB0001