CsGy6G000320 (gene) Cucumber (Gy14) v2

Overview
NameCsGy6G000320
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr6 : 259874 .. 260095 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAGGTTCAAGGGAAACCTTGGAACTTTTATTATGATCCACAGAAAAGTTGGTGAACAATCGTCGCGACAACTGCAGCGTTGCAATGAACCGAGGGGAACGGTTCGATACGATTATCATGAGCATCAACGGTGTGAATTTCACGTCGGCTTCCTTAGCAACTTGAGCCAACAAGGAGGTTGCATCAATGAGAGGTTCAAATTGCTCAAGCCTTACTAA

mRNA sequence

ATGGAAAGGTTCAAGGGAAACCTTGGAACTTTTATTATGATCCACAGAAAAGTTGGTGAACAATCGTCGCGACAACTGCAGCGTTGCAATGAACCGAGGGGAACGGTTCGATACGATTATCATGAGCATCAACGGTGTGAATTTCACGTCGGCTTCCTTAGCAACTTGAGCCAACAAGGAGGTTGCATCAATGAGAGGTTCAAATTGCTCAAGCCTTACTAA

Coding sequence (CDS)

ATGGAAAGGTTCAAGGGAAACCTTGGAACTTTTATTATGATCCACAGAAAAGTTGGTGAACAATCGTCGCGACAACTGCAGCGTTGCAATGAACCGAGGGGAACGGTTCGATACGATTATCATGAGCATCAACGGTGTGAATTTCACGTCGGCTTCCTTAGCAACTTGAGCCAACAAGGAGGTTGCATCAATGAGAGGTTCAAATTGCTCAAGCCTTACTAA

Protein sequence

MERFKGNLGTFIMIHRKVGEQSSRQLQRCNEPRGTVRYDYHEHQRCEFHVGFLSNLSQQGGCINERFKLLKPY
Homology
[Close]
BLAST of CsGy6G000320 vs. NCBI nr
Match: KGN45633.1 (hypothetical protein Csa_6G002280 [Cucumis sativus])

HSP 1 Score: 160.6 bits (405), Expect = 2.0e-36
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MERFKGNLGTFIMIHRKVGEQSSRQLQRCNEPRGTVRYDYHEHQRCEFHVGFLSNLSQQG 60
          MERFKGNLGTFIMIHRKVGEQSSRQLQRCNEPRGTVRYDYHEHQRCEFHVGFLSNLSQQG
Sbjct: 1  MERFKGNLGTFIMIHRKVGEQSSRQLQRCNEPRGTVRYDYHEHQRCEFHVGFLSNLSQQG 60

Query: 61 GCINERFKLLKPY 74
          GCINERFKLLKPY
Sbjct: 61 GCINERFKLLKPY 73

[Close]
BLAST of CsGy6G000320 vs. TrEMBL
Match: tr|A0A0A0K829|A0A0A0K829_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002280 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.3e-36
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MERFKGNLGTFIMIHRKVGEQSSRQLQRCNEPRGTVRYDYHEHQRCEFHVGFLSNLSQQG 60
          MERFKGNLGTFIMIHRKVGEQSSRQLQRCNEPRGTVRYDYHEHQRCEFHVGFLSNLSQQG
Sbjct: 1  MERFKGNLGTFIMIHRKVGEQSSRQLQRCNEPRGTVRYDYHEHQRCEFHVGFLSNLSQQG 60

Query: 61 GCINERFKLLKPY 74
          GCINERFKLLKPY
Sbjct: 61 GCINERFKLLKPY 73

The following BLAST results are available for this feature:
BLAST of CsGy6G000320 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN45633.12.0e-36100.00hypothetical protein Csa_6G002280 [Cucumis sativus][more]
BLAST of CsGy6G000320 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy6G000320 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy6G000320 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K829|A0A0A0K829_CUCSA1.3e-36100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002280 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G000320.1CsGy6G000320.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy6G000320Csa6G002280Cucumber (Chinese Long) v2cgybcuB282
CsGy6G000320CSPI06G00260Wild cucumber (PI 183967)cgybcpiB288
CsGy6G000320CsaV3_6G000320Cucumber (Chinese Long) v3cgybcucB298
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy6G000320Silver-seed gourdcarcgybB0074
CsGy6G000320Silver-seed gourdcarcgybB0607
CsGy6G000320Watermelon (97103) v2cgybwmbB451
CsGy6G000320Wax gourdcgybwgoB510
CsGy6G000320Cucurbita maxima (Rimu)cgybcmaB752
CsGy6G000320Cucurbita moschata (Rifu)cgybcmoB733
CsGy6G000320Cucurbita moschata (Rifu)cgybcmoB854
CsGy6G000320Cucurbita pepo (Zucchini)cgybcpeB721
CsGy6G000320Cucurbita pepo (Zucchini)cgybcpeB776
CsGy6G000320Bottle gourd (USVL1VR-Ls)cgyblsiB360
CsGy6G000320Melon (DHL92) v3.5.1cgybmeB366
CsGy6G000320Melon (DHL92) v3.6.1cgybmedB367
CsGy6G000320Watermelon (Charleston Gray)cgybwcgB443
CsGy6G000320Watermelon (97103) v1cgybwmB503
CsGy6G000320Watermelon (97103) v1cgybwmB511