CsGy4G010930 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCTGAAGAACTCCCAACAGATCGGAAAATGGCCTTCCCCTTTCACCACCACCACCGCCGTGACGACGATGAAGACGGCGAACCTCCTTATCCTCCACCGGGACACAGGCCGCCACACTCCGATCCACCGCCTCCACTGGTTCCCCACATCCACCACCACACTCACTACGGCCAGACTCCTCCGCCGCCTCCACCGTCTTACGTTGACTACCAGTCCAATTTCTCTCCGGAACCGCCCGTTCCCAACTACGGATACTCCTCTGGACCCCCGCCTCCGGTCGTGCACCACCACTCTCACAATCCACACTCTCCCACTGTTATTCACCAACACTCTCATCAGTCCGATTCTCCCTTCTCCAACAGACCAACAGTCAAGGTCTACGCCAAAGCAAACCCTAATTTCTCTCTTGCAATCCGCGACGGCAAAGTCGTACTCGTTCCTTCCGATCCAGACGATCCCGCTCAAGTATGATCGATTCGTTCCTCGATCGCTTTCAGTTTTCGCCTTAATTTGTAATTAGAGTATTTGATTTTTTTAATTTCTTCCTTACAATTCGATAATTTAATGGTGTTGGTGAATCGTGAACGTTTCAGCACTGGTTCAAAGATGAGAAATACAGTACAAGGATTAAGGATGAGGAAGGATGTCCCTGCTTTGCTCTGGTTAATAAGGCCACCGGTCAGGCGATGAAACATTCCATCGGAGCTTCTCATCCGGTAAGATTTTCCCCTGATTTTATTGCCACTTTTTGTTGGAGTTCATCTGGAATTGGAGTTTCATTCATATGATAGAATGAATGATTTTGATGAATTGAAAATGCCTTTTAGAATTTGACCAACAACCCATTTAATCCTTATTAGTTTGTGATGTTGGAGAATTAAAAATGTAATATACTATTTTCAATTTTTTTTAAAAAAAATTCTCATACGAATAAAACATTAGTTTAAAATTTATATGACAAATCAATCATACTATCAATTTATAAAAAGAAAAGTTAAGAAAAAAAAAATGATAAGTGTTTCAGACACGCTTTTCTAAAGATGCATAGTGATTCTAAAACCGGATCGGATTCTACAACTCATCACGTTTATTTATTAATTAATTTAGGGTTCAATTTGTTTTTCTTTTTTTATTCTAAGAAAACAATTAGTATTCTATTAACGTTCTTGATTAAAATGACTTTAGTTGGTGGAAATGGAAGATATAAATGTGTAGGTGGGTCATGTATGAGTTTGTCCGTTGTAACTATTTCTTCTCTTTAAAAAGTTCTGATTAAAATGAAACATTTTTCATTTTGTTATTATTTCTTGTTGCTATTTGTGGGGTTCGGTGGGATTTTTAGGACTTCTTTTACTGTACGTAATCATTTGAAAAGAAAATGATATTATTTTTTATAAATTGTGTTTAACACACATGCTTTATGAACTTCCTTGGTCTCTCATTTTCATTTAAAAATTTGTAACTCTAATCCTTACCTTGTAAAATCTCATCATATTAATGCCAATTTTTATAATTCGACAGGTTACTATATTTTGTACAATTGAGAGTAAACCGAGTCATGATAAAGTTTTATAGACTAAATTGTTGCTAAGTTGAAAGTATAGAGATTGAATTGTTTGGTTCAACAACTGAAAGTTACTTATATTTAGTCTTTTTTTATTTGAGTTTGAATGCTAGTTTTATAATCTATTATTTGATTTTGTTTTGGTTGGGTTATGATGTTCAAGTTGCCTGGATCTGGGCATTCTCTCTCACCAAGTTCTAGGGTTGCATCTTGTTATACGGTTCCTTAAATTCTGGTTCAAGAAAGGTCACAATGGGGAGTAATAGAACCTGAAGACGCAATCATGCCGAGTTTTGTCTTGGTTGATTATGATTGGTGTCCTTTTCGGTATTCATACTGTTTTTATTCTTTCATTTTTGGTTAAACATGTCCGATTGAAACAGAACTGTGGAACTTTGTTTGATGTTGGTTTTGTCCTGGAGAAGGACATTAAATATTCACGTTGTGAAAATGATATATCAATTTCAAACTGACTGAGTTTAAAATTAAAACCGGCTGAGGTCAAAAATAAAAATGCAGGTTCAGTTGACACGTTACGAACCAAATGTTGTGGACGAGTCTGTACTGTGGACACAGAGCAAGGAATTTGGGGAAGGATACAGAGCCATAAGAATGGTGAATAACGTTCACTTGAATGTTGATGCCTTTCATGGAGACAGATATTCTGGTGGAATTCATGACGGCACCCATATTGTTCTGTGGAAATGGAAGGAAGGAGAAAACCAACTATGGAAGATCGTACCCTACTGTAAGTGCTTTCAATTTAATACTATGGTTAGACATCATTCTCTTCTGTTCATCTTGCTGTTACTGACTCTTGATTTCTGGATCTCATGCCAAATCAATGGGTTCTATTGCTCAGTTTTATATTTTTGAATTCTAAATTTTTGAATTCCCCCACCCTGATCCTTTAATACCCTGTTAAACAAAGATTTCATGTTGAAAAATGATAGATCAAAGGATTGGGGCAAGAGGTGAGGTTTTTTAG CCTGAAGAACTCCCAACAGATCGGAAAATGGCCTTCCCCTTTCACCACCACCACCGCCGTGACGACGATGAAGACGGCGAACCTCCTTATCCTCCACCGGGACACAGGCCGCCACACTCCGATCCACCGCCTCCACTGGTTCCCCACATCCACCACCACACTCACTACGGCCAGACTCCTCCGCCGCCTCCACCGTCTTACGTTGACTACCAGTCCAATTTCTCTCCGGAACCGCCCGTTCCCAACTACGGATACTCCTCTGGACCCCCGCCTCCGGTCGTGCACCACCACTCTCACAATCCACACTCTCCCACTGTTATTCACCAACACTCTCATCAGTCCGATTCTCCCTTCTCCAACAGACCAACAGTCAAGGTCTACGCCAAAGCAAACCCTAATTTCTCTCTTGCAATCCGCGACGGCAAAGTCGTACTCGTTCCTTCCGATCCAGACGATCCCGCTCAACACTGGTTCAAAGATGAGAAATACAGTACAAGGATTAAGGATGAGGAAGGATGTCCCTGCTTTGCTCTGGTTAATAAGGCCACCGGTCAGGCGATGAAACATTCCATCGGAGCTTCTCATCCGGTTCAGTTGACACGTTACGAACCAAATGTTGTGGACGAGTCTGTACTGTGGACACAGAGCAAGGAATTTGGGGAAGGATACAGAGCCATAAGAATGGTGAATAACGTTCACTTGAATGTTGATGCCTTTCATGGAGACAGATATTCTGGTGGAATTCATGACGGCACCCATATTGTTCTGTGGAAATGGAAGGAAGGAGAAAACCAACTATGGAAGATCGTACCCTACTATCAAAGGATTGGGGCAAGAGGTGAGGTTTTTTAG ATGGCCTTCCCCTTTCACCACCACCACCGCCGTGACGACGATGAAGACGGCGAACCTCCTTATCCTCCACCGGGACACAGGCCGCCACACTCCGATCCACCGCCTCCACTGGTTCCCCACATCCACCACCACACTCACTACGGCCAGACTCCTCCGCCGCCTCCACCGTCTTACGTTGACTACCAGTCCAATTTCTCTCCGGAACCGCCCGTTCCCAACTACGGATACTCCTCTGGACCCCCGCCTCCGGTCGTGCACCACCACTCTCACAATCCACACTCTCCCACTGTTATTCACCAACACTCTCATCAGTCCGATTCTCCCTTCTCCAACAGACCAACAGTCAAGGTCTACGCCAAAGCAAACCCTAATTTCTCTCTTGCAATCCGCGACGGCAAAGTCGTACTCGTTCCTTCCGATCCAGACGATCCCGCTCAACACTGGTTCAAAGATGAGAAATACAGTACAAGGATTAAGGATGAGGAAGGATGTCCCTGCTTTGCTCTGGTTAATAAGGCCACCGGTCAGGCGATGAAACATTCCATCGGAGCTTCTCATCCGGTTCAGTTGACACGTTACGAACCAAATGTTGTGGACGAGTCTGTACTGTGGACACAGAGCAAGGAATTTGGGGAAGGATACAGAGCCATAAGAATGGTGAATAACGTTCACTTGAATGTTGATGCCTTTCATGGAGACAGATATTCTGGTGGAATTCATGACGGCACCCATATTGTTCTGTGGAAATGGAAGGAAGGAGAAAACCAACTATGGAAGATCGTACCCTACTATCAAAGGATTGGGGCAAGAGGTGAGGTTTTTTAG MAFPFHHHHRRDDDEDGEPPYPPPGHRPPHSDPPPPLVPHIHHHTHYGQTPPPPPPSYVDYQSNFSPEPPVPNYGYSSGPPPPVVHHHSHNPHSPTVIHQHSHQSDSPFSNRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQAMKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDRYSGGIHDGTHIVLWKWKEGENQLWKIVPYYQRIGARGEVF
BLAST of CsGy4G010930 vs. NCBI nr
Match: XP_004147526.1 (PREDICTED: extensin [Cucumis sativus] >KGN53954.1 hypothetical protein Csa_4G193240 [Cucumis sativus]) HSP 1 Score: 337.4 bits (864), Expect = 4.5e-89 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of CsGy4G010930 vs. NCBI nr
Match: XP_008441967.1 (PREDICTED: extensin [Cucumis melo]) HSP 1 Score: 334.0 bits (855), Expect = 4.9e-88 Identity = 152/155 (98.06%), Postives = 155/155 (100.00%), Query Frame = 0
BLAST of CsGy4G010930 vs. NCBI nr
Match: XP_022950338.1 (ricin B-like lectin R40G3 [Cucurbita moschata]) HSP 1 Score: 295.4 bits (755), Expect = 2.0e-76 Identity = 132/155 (85.16%), Postives = 146/155 (94.19%), Query Frame = 0
BLAST of CsGy4G010930 vs. NCBI nr
Match: XP_022978259.1 (ricin B-like lectin R40G3 [Cucurbita maxima]) HSP 1 Score: 294.7 bits (753), Expect = 3.3e-76 Identity = 133/155 (85.81%), Postives = 145/155 (93.55%), Query Frame = 0
BLAST of CsGy4G010930 vs. NCBI nr
Match: XP_022156229.1 (ricin B-like lectin R40G3 [Momordica charantia]) HSP 1 Score: 293.1 bits (749), Expect = 9.7e-76 Identity = 131/154 (85.06%), Postives = 143/154 (92.86%), Query Frame = 0
BLAST of CsGy4G010930 vs. TAIR10
Match: AT2G39050.1 (hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 251.9 bits (642), Expect = 4.5e-67 Identity = 108/154 (70.13%), Postives = 131/154 (85.06%), Query Frame = 0
BLAST of CsGy4G010930 vs. Swiss-Prot
Match: sp|Q945P1|EULS3_ARATH (Ricin B-like lectin EULS3 OS=Arabidopsis thaliana OX=3702 GN=EULS3 PE=1 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 8.1e-66 Identity = 108/154 (70.13%), Postives = 131/154 (85.06%), Query Frame = 0
BLAST of CsGy4G010930 vs. Swiss-Prot
Match: sp|Q6Z4N4|40G3_ORYSJ (Ricin B-like lectin R40G3 OS=Oryza sativa subsp. japonica OX=39947 GN=R40G3 PE=2 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 3.5e-61 Identity = 102/153 (66.67%), Postives = 125/153 (81.70%), Query Frame = 0
BLAST of CsGy4G010930 vs. Swiss-Prot
Match: sp|Q10M12|40C1_ORYSJ (Ricin B-like lectin R40C1 OS=Oryza sativa subsp. japonica OX=39947 GN=R40C1 PE=1 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 7.9e-53 Identity = 88/161 (54.66%), Postives = 121/161 (75.16%), Query Frame = 0
BLAST of CsGy4G010930 vs. Swiss-Prot
Match: sp|Q6Z4N6|40G2_ORYSJ (Ricin B-like lectin R40G2 OS=Oryza sativa subsp. japonica OX=39947 GN=R40G2 PE=2 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 1.3e-52 Identity = 89/150 (59.33%), Postives = 114/150 (76.00%), Query Frame = 0
BLAST of CsGy4G010930 vs. TrEMBL
Match: tr|A0A0A0KYQ4|A0A0A0KYQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G193240 PE=4 SV=1) HSP 1 Score: 337.4 bits (864), Expect = 3.0e-89 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of CsGy4G010930 vs. TrEMBL
Match: tr|A0A1S3B4K8|A0A1S3B4K8_CUCME (extensin OS=Cucumis melo OX=3656 GN=LOC103485969 PE=4 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 3.3e-88 Identity = 152/155 (98.06%), Postives = 155/155 (100.00%), Query Frame = 0
BLAST of CsGy4G010930 vs. TrEMBL
Match: tr|A0A2C9VGD6|A0A2C9VGD6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_08G147900 PE=4 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 1.1e-67 Identity = 113/154 (73.38%), Postives = 135/154 (87.66%), Query Frame = 0
BLAST of CsGy4G010930 vs. TrEMBL
Match: tr|A0A2P5FRD6|A0A2P5FRD6_9ROSA (Ricin B, lectin domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_037440 PE=4 SV=1) HSP 1 Score: 264.6 bits (675), Expect = 2.4e-67 Identity = 114/154 (74.03%), Postives = 135/154 (87.66%), Query Frame = 0
BLAST of CsGy4G010930 vs. TrEMBL
Match: tr|B9SHJ7|B9SHJ7_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1122440 PE=4 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 4.2e-67 Identity = 113/154 (73.38%), Postives = 135/154 (87.66%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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