CsGy3G038430 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G038430
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2
Location	Chr3 : 36106245 .. 36112098 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAAATCATATAAAATAGTGACTACAAAATTGTTAAAAAGAGTATATGAAGTTTTCTAAAAAACGATAGGTTAAATTCTAAGCTTTTTAATTTTTGTCGAAAGTCAATCAAAGGGTCATAGGTAAGATTCATAAACAAAATTCCATTGCTTGTTTAACTTAGCAGTTAGCATCGGGAGAAAAAGGCGATTGGCATTTGGGAAGGGTCCGGGTTCGTTCATCAGAAGAAGTTCAGTGACGAAAAACAAGCGACACAGGTTGGAAATGGCTTGGAGAGGAAAGCTATCCAAGAATTTGAAGGAGCTTCGGATCTTACTCTGCCAATCATCTCCTTCAAGCGCCCCCGCTAGGTATTCCCTTTCTAATCTCTCTTTTACGCTTTATGATCCTTTCTAAATCTACAAAATCCTGCTCCTTCCACACCTTTTCACACATCCTTTGATTAACATGGTTTTGGCTCTCACAGGGCTTTTGTTGAAAAAAATTACAAGGACCTCAAGACTTTGAATCCTAAATTTCCAATATTGATCCGCGAATGCAGTGGAATCGAGCCCCAATTATGGGCTAGATATGGTACTTCCTTGCCCTCTACTCCCCAAATGATTTCATTTCTAGGTTTCGAGATTTGATGCTTTCCTTGCTGCTATACTTCAATTGGTTGATAGGCGTAATTGGTGATGTTAACTAATCTGCTGGGTCGTCCTTCTTTGAAATTGATTCTTACTTTCTTCATCTATTAGTGATCGAAAATACTCTTTCCATGGTAGATAGTCAGGTCATGGTATTTTGAAGTCTCCATTTCCAGGGATGTTGTAGATGCCCATCTAAACGAATTTGTTCTATGTTTATTTTGTTAAGCTTTGCAGTTTTCTTTTTATTTTCTTCTGTGAACTGTGAAATTTGACCCGTCCTGTAGTTTCTCGAGTAAATTAAAAATCAACGGGTTCTATTCCCACGCTGACATCTTCGTTTTACATTCAAAAATGAAGGATAAATTAGTAGCACGAGAGTTTCACTGTGTCCTATTTTCCCTTCATTGTCATCGAAAGAAAACGCGAGCTGTACTTACTTTTGTTTATATCGGTGGCTGATCTTTCAAGAGAGACTCACGAGTCATGAATAATAGTGATATAAACTTCTGAACTCTTACAAATGCAAGGATGGGTTTTATTTGTTGATTCACTTTTTCTGTTTAACCTTTTGTCTAAAAGCTAGTACATGTGAGGAAATACAGAACAAAAGAGGTTTACCACCTACCCACAAATTTTCTAAAAAATGGATCTTTATACCTATCCTCAATAGACGTAGAGAATTTATTGCAGTGCACAAAAAATGAAAAACTCTAATTCCTGGGCATTCGGAGTAGCCCCTAATCTCATCGGCTGAAACCTAGCAAAAAGGGTGTGGACCATAATTGCTCTTAATAACCTTGTGCCACAAAGCATCAGTCCCAAAAATAAAAAAATAACATAGATCAGAGGGGTCTATCCCTCACACACTGATCTTCCAAAAAATACTTTTCCTTTCCCTCCCCACCACACAATGAACCAAGTGAGAGAAAGAAGAAAGCTTATAAGAAATATCCTTCCACATGTTTCGGTAAGTGTGTTAACCCTACCTGATGACAACCCAAAAGGATGAGATGAGGATCATACTTGCTCACAATAATTCTTTGCCGAAGTGTTCCAGGCTCAAAGGGTGGAAATGCCAAAGCCATTTAGCCAAGAGGGCTTTGTTGCAAGTCCTTAAGTTTCCAATTTCTACCCCCCCTCACAGGCCTCTCAATGATCTTCCATCAAACAAAATGCACATGTTTTTCCTTCTTCCACCCCTTTCCAAAGGAAATCGTGCACAGTCTTCTCTATGCTTATACAAGCCAACCAAAAAGCGCTAAATAGAGAGGAATTATAAATGGAAATACCACTTAGAACCAAAGGGATTATAAGTTGGTCTACAAGCATTAGAGAAAAGACATTTATTGTGAGAGGTCAGTCTCCTCCTAACCTTAACCACAGGTGTTCCAAAAAGAAACAAATTTAGGATTACCTCTAAGAGGGAGACCTAGGTGGGAGGAAGGGAGAGAACCAAGATCACAACAAAAAAAATCCCCCCAACCGCTAAGGGGGCGTTTGGGGTGTGAGTAGGTCATTATAGACTGTGAATTATAATAATTTATGTGTTATTATAGTTTGTGTTTAAGGTGCGAACTATTATAGTCTGCTTGGGGTGCTAATTATTTTAGTCTATGTATTGAGTGCATATTACTGTAGTCTTAGTTATAATAGTATGTAAATTAAACGTAGGTTATTTTAGATCGTGTATAATTCTTTTGTACTATTATTCTTTATCATACAAAGAATTATCTACATGAAATATAAAATTAACTAGATTTACATTTTTGTTAAAAAAATTGTCTTTTTTTTTTCGTCATTTTTCAGAGATACCTTAGTTAACATGAAATTGTTAAAAATGTGCTGTATGGATATAATTCATGTCTTTCTCATTCATAAAGCTCCCTTTTCTGGAGGTACAAAATTGGTTCTAAATTAAAACATATAACTCATAAGTCATAATTACCCTACACTTCTCTAGTTAATTTGTTAATTTGTTTAATATTTTGATATTTTGATTTTTTTTAGGTTTTGAAATAAAATTCCATAGACTTTTGTTACCTTAAGTAATTTAAAAAAGATCATAGTTTTCTTTTTTAATCATAATATGCTAATTTTAAGTCTTCAATCCAGTTAAATGGACCAAAGAAAAAAATGAAAATGTTATTAAACTAAATTAGAGATTTCTGCACCTATAGCGTAAATAAATATGCTTAATTACACAATTGCAGTTTAATGAGTCATTATTTTATTAAAAAATGTAGCCTAATTTTATTTTTCAGCTCCCCCTAAATGTGTGTGTATATATATAGATATATAGATATATAGATATAGGCATATATAGACATGGACATATATAGATATAGACATATATATAGACAAATACATATATACATATATACATATATATCATAGCACTATCTCCTAAAATGTAAAACCTTAATTTTAAACAAATAATGGAAGAGAGAATTTTAAAACAGACATCTAGTAATAATGATAAGTTTTAAACCCTTTTGATATTTTGCTTAAAATAAAAACACAAGTGTGTTTGACAACTCTCTTTTAAAAGTGTTTTTATCGAAAAACTTCAAGTTTGACCAGTGGTGAATGAAGATTGGTTGGTGGCGGTCGTCGTAGTTGGTTATTGGAAGTTTGTCAGTGGAGTCACTGGAAGTGGTGGTAGGAGATTGGCCGGCGACGGTCACCAAAAGTGGTGTGTGAAAGTTGGCCGACAAACTTTTTAACCCTTGAAACAAACACCCACTTAGAGTTGAAGAATAGTAATGGGTGTTATTTGAAATCCTAGTCCTAAGTTCCAACTAAAATTAGCCCTTACTCCAAACAAGTTGTGGGCTATTAGCCCACTCCACCCGATGCCTCAAACATGCCCTAAGCTTTTCTTTGTCGCAATTTAGCCAAAATCGACTCTTGCGCCCGTTGATCTTAAGCATATAGCTTCAAAAAAGCATGCATTAAAATTAAGAATGAATTCTCCTTACTGGAAGGATTGTGTTGTTGGCAAATTGAAGGTGAGATAAGACCCTTTCTCTTTACCGACCTCAAATGGCTCAATAATTTAATCTTCAACAGTCGGGAAAAAAGACCTTATTCAGCACATCCACTACGAACAAGAGAAAAGGTGGTGAAGAATCACTTCATCTTAGGGCCCTAAAAGCCCTTATCTTACCTTTCAGACTCCCGTTAATGAGAATAGAGTGACACACATTTCTACTTGGCTTGTCCAATAGTTCCAACGAACAGCTTTAGGAAGGGCTATTGTTTGACTTATTTGGATTGAGAGGAATAACAAATTTTTTAGGGAAATGGAGAGATCAAGTGAGGAAGTATTATGTTTGCTAATAGACTCTTCTCTAATTATGATCTTTCTTTGATTTTGTTAGGTTGAAGCCCTTTTTGTAGCTCTTGTGGTTTTCTCTTGCTTCTTGCTCCTTGTTTTTTTGTCAAGCTCTCCTGCTCTTTTTGTGTGCCATGCATTCCTTCCATTCTTTCTCGAGAAAAGTTCGGTTTCAGGGAGGGTACTTTTTTTCCCTTCATTGGTAATTTACTTGATAGCAAAGTGTACACTCCATCTCTGGAGGGTGCTCGAAAGGTTAACTGATGACTGTTGTGTAAAAAGAGATTGAAACACTCATCAAGTGAGGAAGCATGAGAACTTGGGGGAAATGTAGATGTTGGGATTTACCTTCAATTTTTATACGGAATGTTAGCAATACCTATGAGTGGCTCCCAAATAAAAGGTCTGAACTTTTGATAACTATTTTCATCCTTCCATGCGCATTTGCCCAAGTTTGGGTCAAGGATTCCAGAATCCATTGTGATGACATTTAAAAGAGACTTGTAGACTTGCAGCAAACAAGCAGAGTCATAAAGCTACAAAAGGATGAAAATATCCATCGGTATGTCCATATAACATGTATTTGACAAGGGTATCTGTGAGAGTGAAAGATGCCCGTTATTTTAGTATCCCTCCAAGGGTTTTCTCAGGATCTGGTGTTTGTTCCATACCTTCCATGTTAGTCTCCTGAAGGCAATACCTCTTTCAACGAAAGTGGCTTTCTAAGGGGGCTTTAGTGGTTTTGATGATTGGTAGAGTCGATCATCAGCCACCTTTAGAAACTCCCTGCTGTTTTAGCTAATTCTCATGCCTACTAAACTTCGAATTGTAGAAGAATGCAGTAGAGGTGAAGAAGAGAAAAAGAGGAGGCTTATGCAAATCGACAAAGAGAGCTTGTGGTTATGGAAATTGGAATTACCTTGATGGTATTATGAGAATGAGAGATGACACTTCCTCAAACAATTGGGGAGATTGTCACCTGGAAATTGGAAGTAGTGGACGTGCTTTCTTTGCCTTTTTAACCATCTGGTTTGGCGCATGATCACAAGGAACAATTGGTGAATGATAATAGATGTTTCTTATGAATGCTAATATCTGACGAGTTTCTTTTTCTAAAGAGTTATCATGTGCTGAATTTTAAAGGATCTGTGATTGCAGTTTGCACTTTTTATGTTCGTTTTGGTTACTGCAACCAATTATTTTTCCTTTTGATTTGGCAGACATGGGCATTGAGAGGGTTGCTCGTCTGGAGGGGTTGAGTGAGGCACAGATCTCAAAGGCACTCGAAGACCTAGTGAAAGTCGGGGCATCATGAAGGAATGATCTGCTGTGCTATTGTTACTGGCAACTGACGTTAATAAATGCACGAGTGGAACTTTTGTTGAGATGCACTGTTTACATTCTTTCCGGTCTGCTTATATGAGATTATTGCTCAAAGATTCATCTTGAGTAAACTTGTTTCTGGTACGTAAGCCTATTTGTTTATATGAATAGTTTCTCCGGGAGTGTTATCATAATGGATACTTCTTGCAATGAGAGATTAGATTGAAATATATTAAAATATGAGAGAATATATTTGAAACCATGAGGATAAATTGAAAAGCACTACAACGTTAAGTAGTAAAGCATTTGATGTATTTAGCCTTTTGAATGCACACAAGAAGTTGGTAAGTTTAGCAAAGTTTTAAAGTTGATGAGTTTTGGGAGTGGCTTGTTTTTGTTTTATAGACTACTGTGGTCTTCGAAGATGCTTTGGTTGACTCTATTGTGGTCTTCCTTTGAAACTTTTGAACCGTCTTTTCAAAGACTCCTTTTCCCTCTTTAATTGTTTTATAGAATCAATAATTTAGCCTTTTCCCTCTTTAATTGTTTTATGGAATCAATACTT

mRNA sequence

ATAAAATCATATAAAATAGTGACTACAAAATTGTTAAAAAGAGTATATGAAGTTTTCTAAAAAACGATAGGTTAAATTCTAAGCTTTTTAATTTTTGTCGAAAGTCAATCAAAGGGTCATAGGTAAGATTCATAAACAAAATTCCATTGCTTGTTTAACTTAGCAGTTAGCATCGGGAGAAAAAGGCGATTGGCATTTGGGAAGGGTCCGGGTTCGTTCATCAGAAGAAGTTCAGTGACGAAAAACAAGCGACACAGGTTGGAAATGGCTTGGAGAGGAAAGCTATCCAAGAATTTGAAGGAGCTTCGGATCTTACTCTGCCAATCATCTCCTTCAAGCGCCCCCGCTAGGGCTTTTGTTGAAAAAAATTACAAGGACCTCAAGACTTTGAATCCTAAATTTCCAATATTGATCCGCGAATGCAGTGGAATCGAGCCCCAATTATGGGCTAGATATGACATGGGCATTGAGAGGGTTGCTCGTCTGGAGGGGTTGAGTGAGGCACAGATCTCAAAGGCACTCGAAGACCTAGTGAAAGTCGGGGCATCATGAAGGAATGATCTGCTGTGCTATTGTTACTGGCAACTGACGTTAATAAATGCACGAGTGGAACTTTTGTTGAGATGCACTGTTTACATTCTTTCCGGTCTGCTTATATGAGATTATTGCTCAAAGATTCATCTTGAGTAAACTTGTTTCTGGTACGTAAGCCTATTTGTTTATATGAATAGTTTCTCCGGGAGTGTTATCATAATGGATACTTCTTGCAATGAGAGATTAGATTGAAATATATTAAAATATGAGAGAATATATTTGAAACCATGAGGATAAATTGAAAAGCACTACAACGTTAAGTAGTAAAGCATTTGATGTATTTAGCCTTTTGAATGCACACAAGAAGTTGGTAAGTTTAGCAAAGTTTTAAAGTTGATGAGTTTTGGGAGTGGCTTGTTTTTGTTTTATAGACTACTGTGGTCTTCGAAGATGCTTTGGTTGACTCTATTGTGGTCTTCCTTTGAAACTTTTGAACCGTCTTTTCAAAGACTCCTTTTCCCTCTTTAATTGTTTTATAGAATCAATAATTTAGCCTTTTCCCTCTTTAATTGTTTTATGGAATCAATACTT

Coding sequence (CDS)

ATGGCTTGGAGAGGAAAGCTATCCAAGAATTTGAAGGAGCTTCGGATCTTACTCTGCCAATCATCTCCTTCAAGCGCCCCCGCTAGGGCTTTTGTTGAAAAAAATTACAAGGACCTCAAGACTTTGAATCCTAAATTTCCAATATTGATCCGCGAATGCAGTGGAATCGAGCCCCAATTATGGGCTAGATATGACATGGGCATTGAGAGGGTTGCTCGTCTGGAGGGGTTGAGTGAGGCACAGATCTCAAAGGCACTCGAAGACCTAGTGAAAGTCGGGGCATCATGA

Protein sequence

MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

Homology

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BLAST of CsGy3G038430 vs. NCBI nr
Match: XP_004141152.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis sativus] >KGN59778.1 hypothetical protein Csa_3G845450 [Cucumis sativus])

HSP 1 Score: 191.4 bits (485), Expect = 1.4e-45
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60
          MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL
Sbjct: 1  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 96
          WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of CsGy3G038430 vs. NCBI nr
Match: XP_008465169.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis melo])

HSP 1 Score: 189.9 bits (481), Expect = 4.0e-45
Identity = 94/95 (98.95%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60
          MAWRG+LSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL
Sbjct: 1  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 96
          WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of CsGy3G038430 vs. NCBI nr
Match: XP_022935669.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita moschata])

HSP 1 Score: 186.8 bits (473), Expect = 3.4e-44
Identity = 91/95 (95.79%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60
          MAWRG+LSKNLKELRILLCQ+SPSSAPARAFVEKNYK+LKTLNPKFPILIRECSG+EPQL
Sbjct: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQL 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 96
          WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of CsGy3G038430 vs. NCBI nr
Match: XP_022152373.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Momordica charantia])

HSP 1 Score: 185.7 bits (470), Expect = 7.5e-44
Identity = 90/95 (94.74%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60
          MAWRG LSKNLKELRILLCQ+SPSSAPARAFVEKNYKDLK+LNPKFPILIRECSG+EPQL
Sbjct: 1  MAWRGHLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKSLNPKFPILIRECSGVEPQL 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 96
          WARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of CsGy3G038430 vs. NCBI nr
Match: XP_022983615.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita maxima])

HSP 1 Score: 184.5 bits (467), Expect = 1.7e-43
Identity = 90/95 (94.74%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60
          MAWRG+LSKNLKELRILLCQ+SPSSAPARAFVEKNYK+LKTLNPKFPILIRECSG+EPQL
Sbjct: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQL 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 96
          WARYDMGIERVARLEGLSEAQI KALEDLVKVGAS
Sbjct: 61 WARYDMGIERVARLEGLSEAQILKALEDLVKVGAS 95

[Close]

BLAST of CsGy3G038430 vs. TAIR10
Match: AT5G47890.1 (NADH-ubiquinone oxidoreductase B8 subunit, putative)

HSP 1 Score: 157.9 bits (398), Expect = 3.1e-39
Identity = 72/95 (75.79%), Postives = 85/95 (89.47%), Query Frame = 0


Query: 1  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60
          MAWRG +SK++KELRILLCQSSP+SAP R FVEKNYKDLK+LNPK PILIRECSG++PQ+
Sbjct: 1  MAWRGSISKSMKELRILLCQSSPASAPTRTFVEKNYKDLKSLNPKLPILIRECSGVQPQM 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 96
          WARYDMG+ER   L+GL+E QI KALE+LVK GA+
Sbjct: 61 WARYDMGVERCVNLDGLTEPQILKALENLVKSGAT 95

[Close]

BLAST of CsGy3G038430 vs. Swiss-Prot
Match: sp|Q9FIJ2|NDUA2_ARATH (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Arabidopsis thaliana OX=3702 GN=At5g47890 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 5.5e-38
Identity = 72/95 (75.79%), Postives = 85/95 (89.47%), Query Frame = 0


Query: 1  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60
          MAWRG +SK++KELRILLCQSSP+SAP R FVEKNYKDLK+LNPK PILIRECSG++PQ+
Sbjct: 1  MAWRGSISKSMKELRILLCQSSPASAPTRTFVEKNYKDLKSLNPKLPILIRECSGVQPQM 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 96
          WARYDMG+ER   L+GL+E QI KALE+LVK GA+
Sbjct: 61 WARYDMGVERCVNLDGLTEPQILKALENLVKSGAT 95

[Close]

BLAST of CsGy3G038430 vs. Swiss-Prot
Match: sp|Q02370|NDUA2_BOVIN (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Bos taurus OX=9913 GN=NDUFA2 PE=1 SV=2)

HSP 1 Score: 92.8 bits (229), Expect = 2.2e-18
Identity = 45/87 (51.72%), Postives = 59/87 (67.82%), Query Frame = 0


Query: 4  RGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWAR 63
          RGKL   L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS ++P+LWAR
Sbjct: 11 RGKL--GLREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWAR 70

Query: 64 YDMGIERVARLEGLSEAQISKALEDLV 91
          Y  G E+   L   S  Q+++ALE+++
Sbjct: 71 YAFGQEKNVSLNNFSADQVTRALENVL 95

[Close]

BLAST of CsGy3G038430 vs. Swiss-Prot
Match: sp|P0CB79|NDUA2_PONAB (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo abelii OX=9601 GN=NDUFA2 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.2e-18
Identity = 44/85 (51.76%), Postives = 58/85 (68.24%), Query Frame = 0


Query: 11  LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIER 70
           L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS ++P+LWARY  G E+
Sbjct: 16  LREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYAFGQEK 75

Query: 71  VARLEGLSEAQISKALEDLVKVGAS 96
              L   S  Q+++ALE+++K  AS
Sbjct: 76  NVPLNNFSADQVTRALENVLKPEAS 100

[Close]

BLAST of CsGy3G038430 vs. Swiss-Prot
Match: sp|P0CB80|NDUA2_PONPY (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo pygmaeus OX=9600 GN=NDUFA2 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.2e-18
Identity = 44/85 (51.76%), Postives = 58/85 (68.24%), Query Frame = 0


Query: 11  LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIER 70
           L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS ++P+LWARY  G E+
Sbjct: 16  LREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYAFGQEK 75

Query: 71  VARLEGLSEAQISKALEDLVKVGAS 96
              L   S  Q+++ALE+++K  AS
Sbjct: 76  NVPLNNFSADQVTRALENVLKPEAS 100

[Close]

BLAST of CsGy3G038430 vs. Swiss-Prot
Match: sp|Q4R5E2|NDUA2_MACFA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Macaca fascicularis OX=9541 GN=NDUFA2 PE=3 SV=3)

HSP 1 Score: 89.7 bits (221), Expect = 1.8e-17
Identity = 41/80 (51.25%), Postives = 55/80 (68.75%), Query Frame = 0


Query: 11 LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIER 70
          L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS ++P+LWARY  G E+
Sbjct: 16 LREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYAFGQEK 75

Query: 71 VARLEGLSEAQISKALEDLV 91
             L   S  Q+++ALE+++
Sbjct: 76 NVPLNNFSADQVTRALENVL 95

[Close]

BLAST of CsGy3G038430 vs. TrEMBL
Match: tr|A0A0A0LDA2|A0A0A0LDA2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G845450 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 9.1e-46
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60
          MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL
Sbjct: 1  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 96
          WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of CsGy3G038430 vs. TrEMBL
Match: tr|A0A1S3CN67|A0A1S3CN67_CUCME (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Cucumis melo OX=3656 GN=LOC103502835 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.6e-45
Identity = 94/95 (98.95%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60
          MAWRG+LSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL
Sbjct: 1  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 96
          WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of CsGy3G038430 vs. TrEMBL
Match: tr|A0A2I4FC77|A0A2I4FC77_9ROSI (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like OS=Juglans regia OX=51240 GN=LOC108997425 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.3e-39
Identity = 82/95 (86.32%), Postives = 90/95 (94.74%), Query Frame = 0


Query: 1  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60
          MAWRG LS+N+KELRILLCQ+SP+S+ ARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL
Sbjct: 1  MAWRGHLSRNMKELRILLCQTSPASSSARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 96
          WARYDMG+ER  RLEGL+EAQI KA+EDLVKVGAS
Sbjct: 61 WARYDMGVERGIRLEGLTEAQILKAVEDLVKVGAS 95

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BLAST of CsGy3G038430 vs. TrEMBL
Match: tr|A0A2P5F8N1|A0A2P5F8N1_9ROSA (NADH dehydrogenase [ubiquinone] (Complex I), alpha subcomplex, subunit OS=Trema orientalis OX=63057 GN=TorRG33x02_101900 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 3.7e-39
Identity = 81/95 (85.26%), Postives = 89/95 (93.68%), Query Frame = 0


Query: 1  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60
          MAWRG+LSKNLKELRILLCQSSP+S+  RAFVEKNY+DLK LNPKFPILIRECSGIEPQL
Sbjct: 1  MAWRGQLSKNLKELRILLCQSSPASSATRAFVEKNYQDLKALNPKFPILIRECSGIEPQL 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 96
          WARYD+G+ER  RLEGLSEAQI+KALEDLVK GA+
Sbjct: 61 WARYDLGVERGIRLEGLSEAQITKALEDLVKAGAA 95

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BLAST of CsGy3G038430 vs. TrEMBL
Match: tr|A0A2P5AQA2|A0A2P5AQA2_PARAD (NADH dehydrogenase [ubiquinone] (Complex I), alpha subcomplex, subunit OS=Parasponia andersonii OX=3476 GN=PanWU01x14_310440 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 8.3e-39
Identity = 80/95 (84.21%), Postives = 89/95 (93.68%), Query Frame = 0


Query: 1  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60
          MAWRG+LSKNLKELRILLCQSSP+S+  RAFVE+NY+DLK LNPKFPILIRECSGIEPQL
Sbjct: 1  MAWRGQLSKNLKELRILLCQSSPASSATRAFVERNYQDLKALNPKFPILIRECSGIEPQL 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 96
          WARYD+G+ER  RLEGLSEAQI+KALEDLVK GA+
Sbjct: 61 WARYDLGVERGIRLEGLSEAQITKALEDLVKAGAA 95

The following BLAST results are available for this feature:

BLAST of CsGy3G038430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141152.1	1.4e-45	100.00	PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis...	[more]
XP_008465169.1	4.0e-45	98.95	PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis...	[more]
XP_022935669.1	3.4e-44	95.79	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita mos...	[more]
XP_022152373.1	7.5e-44	94.74	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Momordica charanti...	[more]
XP_022983615.1	1.7e-43	94.74	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita max...	[more]

BLAST of CsGy3G038430 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G47890.1	3.1e-39	75.79	NADH-ubiquinone oxidoreductase B8 subunit, putative	[more]

BLAST of CsGy3G038430 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FIJ2\|NDUA2_ARATH	5.5e-38	75.79	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Arabidopsis thal...	[more]
sp\|Q02370\|NDUA2_BOVIN	2.2e-18	51.72	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Bos taurus OX=99...	[more]
sp\|P0CB79\|NDUA2_PONAB	2.2e-18	51.76	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo abelii OX=...	[more]
sp\|P0CB80\|NDUA2_PONPY	2.2e-18	51.76	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo pygmaeus O...	[more]
sp\|Q4R5E2\|NDUA2_MACFA	1.8e-17	51.25	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Macaca fascicula...	[more]

BLAST of CsGy3G038430 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LDA2\|A0A0A0LDA2_CUCSA	9.1e-46	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G845450 PE=4 SV=1	[more]
tr\|A0A1S3CN67\|A0A1S3CN67_CUCME	2.6e-45	98.95	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Cucumis melo OX=...	[more]
tr\|A0A2I4FC77\|A0A2I4FC77_9ROSI	1.3e-39	86.32	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like OS=Juglans reg...	[more]
tr\|A0A2P5F8N1\|A0A2P5F8N1_9ROSA	3.7e-39	85.26	NADH dehydrogenase [ubiquinone] (Complex I), alpha subcomplex, subunit OS=Trema ...	[more]
tr\|A0A2P5AQA2\|A0A2P5AQA2_PARAD	8.3e-39	84.21	NADH dehydrogenase [ubiquinone] (Complex I), alpha subcomplex, subunit OS=Parasp...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036249	Thioredoxin-like_sf
IPR016464	NADH_Ub_cplx-1_asu_su-2
IPR007741	Ribosome/NADH_DH

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G038430.1	CsGy3G038430.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007741	Ribosomal protein/NADH dehydrogenase domain	SMART	SM00916	L51_S25_CI_B8_2	coord: 20..93 e-value: 6.9E-24 score: 95.4
IPR007741	Ribosomal protein/NADH dehydrogenase domain	PFAM	PF05047	L51_S25_CI-B8	coord: 28..78 e-value: 1.3E-13 score: 50.5
IPR016464	NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2	PIRSF	PIRSF005822	NDUA2	coord: 1..95 e-value: 5.2E-39 score: 130.7
IPR016464	NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2	PANTHER	PTHR12878	NADH-UBIQUINONE OXIDOREDUCTASE B8 SUBUNIT	coord: 1..93
None	No IPR available	GENE3D	G3DSA:3.40.30.10		coord: 2..94 e-value: 6.5E-36 score: 124.4
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	SSF52833	Thioredoxin-like	coord: 10..91

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G038430	Cla017191	Watermelon (97103) v1	cgybwmB187
CsGy3G038430	Csa3G845450	Cucumber (Chinese Long) v2	cgybcuB110
CsGy3G038430	MELO3C026758	Melon (DHL92) v3.5.1	cgybmeB184
CsGy3G038430	ClCG10G013160	Watermelon (Charleston Gray)	cgybwcgB179
CsGy3G038430	CSPI03G40960	Wild cucumber (PI 183967)	cgybcpiB111
CsGy3G038430	CmaCh14G010710	Cucurbita maxima (Rimu)	cgybcmaB320
CsGy3G038430	CmaCh06G017470	Cucurbita maxima (Rimu)	cgybcmaB431
CsGy3G038430	CmoCh06G017340	Cucurbita moschata (Rifu)	cgybcmoB404
CsGy3G038430	CmoCh14G010890	Cucurbita moschata (Rifu)	cgybcmoB293
CsGy3G038430	Lsi03G012790	Bottle gourd (USVL1VR-Ls)	cgyblsiB171
CsGy3G038430	Cp4.1LG03g09300	Cucurbita pepo (Zucchini)	cgybcpeB403
CsGy3G038430	MELO3C026758.2	Melon (DHL92) v3.6.1	cgybmedB185
CsGy3G038430	Bhi11G001276	Wax gourd	cgybwgoB226
CsGy3G038430	Carg23326	Silver-seed gourd	carcgybB0289
CsGy3G038430	Carg11280	Silver-seed gourd	carcgybB0804

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G038430	Watermelon (97103) v2	cgybwmbB178
CsGy3G038430	Cucurbita pepo (Zucchini)	cgybcpeB458
CsGy3G038430	Cucumber (Chinese Long) v3	cgybcucB117