CsGy2G003850 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAAAGAGAAGAATATGTTAATATGTTGAATGAAAATTGAAGTATAAGGATCAAAATTAGTGTTCATGGAGTGGGTACCACTGTTCATTCAACGTGTCTCCTCCAATGAAAGACCTCAAAATTGCCAAATCATGCGACCCTTCTCTCTCTCTCCCCTGTTCCAGCGAGACTTTATTTTCCTTTCCAACTCTCGCTTTGTTTCTTCTTCTTCTCCCCTTTTCCCTTCTCGCCTCTAAATTCTTTTACGCAATTCCAGGCTGCTGAACAGTTGGGTGAACCTCATTTAAAGAACCCATTTCAAAGATGCATTCATTTGGGTTCAGAGCCAACGCTTTGCTCACCTTCGCCGCCACCATTCTCGCCGTCATTTGTGCTTTCGCTTCCTTTTCCGATACCCTCAACTCCCCTTCACCCACTGCACAAGTTCAGGTCTCCCTTCTTCTTCTTCTTCTTCTTCTCTCCTCATCTTTCTGGGTTTTCTTTTCCTTCCCCTTTTAGATCTGTGGATTCATTTTTCTTGAATTTCCACACCCATTTGGTGATTTGATTTGGTTTTCTTGTTTTTGTGTCTTAGGTTCTCAGCATCAATTGGTTTCAAAAGCAACCCAATGGAAATGATGAGGTATGATCTCATGGACTTTCTTGTTTCTTTAGTATTTGATGAAGTGGGGTTCTATTGGGTTTGTGAAAATTTGTGTGAGAAGAGGGAATGAACGGCATTTCAGTTTCCTGACGTGTTGAACTTTAGGGGTCCTTTTTCTCCCTCTTTTTCCTTTTGTACTGCATGATTTGTTATTTGATGTAATGAAATGGGACATTAGTGTATTTGAAAATTATGAAAAGTTGTTGGGGAGAAGGCCCAAGTTGGTTATTGGAGAACATGTAGTCTCGAAAATTAGGGCACGTACCTAAGAATGTTGATGTTGGTTGTTCCTTGTTCGAATCCTTTCTCGCCCGCAGCCAGTCAAAAAGGGCAGACTTTTCCCTTGTGTGTATGAAAATCATGGTTGGGGGAAATTATCTGAGGTTTCGTCTTCTTAGGATTGCCAGGATACCATTAGACCAAATAACCATGACCTTACTCCTGAAGAAAGTACCAAAAATGAATTGAAACGCCTCTTCACTCCTTCTAGAGAAGCACCAGCTTAGACCGAACAGACGTAAAACATATTTTGCTGTTTTATATATATATATATATGTAGGAAACAATATTTAGCGTGTCTCTAATCCAGTCGAATGCTGTTTCTTCTTATCTGATGGAAAGCCGTGTTTTTCTTAGATAACTGATGGTGGGTTGGCTGTAATCTTGACTAGGGGTTCTGTAATTTCATTAAGAGATTATTTCTAACTCTATCATTTTTAACTCTGTCAACCTTGATCCCTCCTCTCCCCCCTTTTTAGGTTTCTCTACTATGCTCGTTGTATAATTCTCTTCTACTTTGAGTTTTACATTAATAAAGAAGCTTGTCTCCATCTAAAAAAAATCTTAGCAAGATTGATTACTTGATGGATTTTTAGATACACAAATATATGAATTATGAGGAGAAATTTATTGAATACGTCAAGTAAATGCGTGGATATATTGAGAAAGTAAAGATCCCACAGGATAGTATAATAAAGAGGTCTTTTTCTCACTCTAGGTAAGAAAGTGATCAAGGAAAGTTAAAGTTAAAAGAGGACTTTTCTTTCTGTTGAGTTCTTTGAAATGATAAGTTTCTTTTCTTTGATTGTGTAAGTGTGAGATTGAGTGTGGATAGGTTTCTTGGCGCTGATTAACTCCAACAACATTCGCCCTTAAGCTAGGCTTCCATGACTCCATCATCTTCATGAACGAGTCATTTTTCAATGCTTTTGATGAATATGTATGTAATATCATCTCCGACCTTATAGTCGTATTGTAATAATTCTCTATTTATGATTAGATCTCTAGGGAAATTATATTTGACTTTTTTGTGATTATTCCCTTTGTGAAAAGGTAGACTTGGTGTGAGAACGATTGACAAGCTTATTATCCCAAAACAATGTACTCCTTTCTTCTTGAAGGACACTTTGGTCAATGATAAGGAACTGAAAAAAAAAATCAAATAGGCACAAGCACATTTTTTAGAAGAGGATTGATGGGAGCTTATTATCATAAAATAATGCAATTACTCTTTCTTGATTATTTGACAGAATGCTTCTTTTTGCAGGTTAGCATGACTTTAAACATATCAGCGGACTTGCAGTCATTATTTACGTGGAACACAAAGCAGGTGCAGTGGCGAACTATTTTCTTCTTTTGTTTCCTCTCATAATCCTTTCTACAGTCTGGTTGGTTCATTGTGGTGATTATAAATAATTAGTTGATAGAACACGTTTGTTTATTCACACACTAGTTACACCAAGGGCCAGCCGACTCCTTTTGTTCATACTAAATCCCAAGTCATTCTCCCCTTACTTTCTTACTTCTATATTCTCTTAACTATCTGCATTCGAGGGTCTATTATAAACGTCATACAAATTGTCATAATCCCTGAAGTTAATAGGTTTCAAATAGCTGGATGTCCATTTGGCATAGGGTGGTCATTGTCGCTTCTTCCCTTTATTTGTATATTCTGTGAACTACGTCATTCAAGTTAATAATAGTGTCGGGGATCACAAGGGTTTCATCTGTTTATATACATATTTCATAAACTATAAATAAAACCCTTTCTTTCTTGAGATTCGGCAGTGTTATCATGATCTTCATTTTAACATGTGCTACAGGTTTTTGTGTTTCTTGCTGCTGAATATGAAACCCCATTGAACTCCTTGAATCAGGTGAGTTTCTGCTCATCTCTTTTAGCAACTTGACTCGCCTTAGGTTTTTGGCTTTCTCGTGACTGAAATCACAAAAGTTCACATATTTCACTACACGGGGATTCTTTATACATTTACTGCAATTTAATCCCTTTCCAAAATGTGGTTTCTAGATCTCACTTTGGGACGGTATCGTACCTTCCAAAGAGATTGCAAAGTTTCAAATCCATACATCAAACAAGTATCGCTTTGTTGATCAGGTTTGTTATCTCTGGTTCTTTTCCAAAGCTTTCTCCAACATGTTTATGATGATTAGTAAGTTTTAAACCTAAAAGTGACTAACTTGTATTTCTCCTTGTTCAGGGAAGCAATCTGAGAGGTAAAGAGTTTAACTTGACATTGCATTGGCATGTGATGCCAAAGACAGGCAAGATGTTTGCAAATAAATTGGTGATGTCTGGATATCGTTTGCCACAGGAATATAGATGAGAAAAAATTTCTCAATCAATTGTAATTTCTGAACTAAACCTTACAATAGGCTTTAGCATCAGCCAGCTTAATCAACAGTCTTACAAACACTGAACATTTCATGAATGGAATAGGAAGAGGAGGAATTTTGTGTATTCCATTTTTTCATGAATTCTTCAGGCTTTTAAATGAATTGAGATATGATACAGTTTGGTCTTTTTTTTTTCCCACCTCTCAACTGCATAGTCTCTGTGATGGCAGATGACCCTAATAACTAATTTTAGTTATTGATCTACATGAACTCCAAT CAAAAAGAGAAGAATATGTTAATATGTTGAATGAAAATTGAAGTATAAGGATCAAAATTAGTGTTCATGGAGTGGGTACCACTGTTCATTCAACGTGTCTCCTCCAATGAAAGACCTCAAAATTGCCAAATCATGCGACCCTTCTCTCTCTCTCCCCTGTTCCAGCGAGACTTTATTTTCCTTTCCAACTCTCGCTTTGTTTCTTCTTCTTCTCCCCTTTTCCCTTCTCGCCTCTAAATTCTTTTACGCAATTCCAGGCTGCTGAACAGTTGGGTGAACCTCATTTAAAGAACCCATTTCAAAGATGCATTCATTTGGGTTCAGAGCCAACGCTTTGCTCACCTTCGCCGCCACCATTCTCGCCGTCATTTGTGCTTTCGCTTCCTTTTCCGATACCCTCAACTCCCCTTCACCCACTGCACAAGTTCAGGTTCTCAGCATCAATTGGTTTCAAAAGCAACCCAATGGAAATGATGAGGAAACAATATTTAGCGTGTCTCTAATCCAGTCGAATGCTGTTTCTTCTTATCTGATGGAAAGCCGTGTTAGCATGACTTTAAACATATCAGCGGACTTGCAGTCATTATTTACGTGGAACACAAAGCAGGTTTTTGTGTTTCTTGCTGCTGAATATGAAACCCCATTGAACTCCTTGAATCAGATCTCACTTTGGGACGGTATCGTACCTTCCAAAGAGATTGCAAAGTTTCAAATCCATACATCAAACAAGTATCGCTTTGTTGATCAGGGAAGCAATCTGAGAGGTAAAGAGTTTAACTTGACATTGCATTGGCATGTGATGCCAAAGACAGGCAAGATGTTTGCAAATAAATTGGTGATGTCTGGATATCGTTTGCCACAGGAATATAGATGAGAAAAAATTTCTCAATCAATTGTAATTTCTGAACTAAACCTTACAATAGGCTTTAGCATCAGCCAGCTTAATCAACAGTCTTACAAACACTGAACATTTCATGAATGGAATAGGAAGAGGAGGAATTTTGTGTATTCCATTTTTTCATGAATTCTTCAGGCTTTTAAATGAATTGAGATATGATACAGTTTGGTCTTTTTTTTTTCCCACCTCTCAACTGCATAGTCTCTGTGATGGCAGATGACCCTAATAACTAATTTTAGTTATTGATCTACATGAACTCCAAT ATGCATTCATTTGGGTTCAGAGCCAACGCTTTGCTCACCTTCGCCGCCACCATTCTCGCCGTCATTTGTGCTTTCGCTTCCTTTTCCGATACCCTCAACTCCCCTTCACCCACTGCACAAGTTCAGGTTCTCAGCATCAATTGGTTTCAAAAGCAACCCAATGGAAATGATGAGGAAACAATATTTAGCGTGTCTCTAATCCAGTCGAATGCTGTTTCTTCTTATCTGATGGAAAGCCGTGTTAGCATGACTTTAAACATATCAGCGGACTTGCAGTCATTATTTACGTGGAACACAAAGCAGGTTTTTGTGTTTCTTGCTGCTGAATATGAAACCCCATTGAACTCCTTGAATCAGATCTCACTTTGGGACGGTATCGTACCTTCCAAAGAGATTGCAAAGTTTCAAATCCATACATCAAACAAGTATCGCTTTGTTGATCAGGGAAGCAATCTGAGAGGTAAAGAGTTTAACTTGACATTGCATTGGCATGTGATGCCAAAGACAGGCAAGATGTTTGCAAATAAATTGGTGATGTCTGGATATCGTTTGCCACAGGAATATAGATGA MHSFGFRANALLTFAATILAVICAFASFSDTLNSPSPTAQVQVLSINWFQKQPNGNDEETIFSVSLIQSNAVSSYLMESRVSMTLNISADLQSLFTWNTKQVFVFLAAEYETPLNSLNQISLWDGIVPSKEIAKFQIHTSNKYRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMSGYRLPQEYR
BLAST of CsGy2G003850 vs. NCBI nr
Match: XP_004139189.1 (PREDICTED: signal peptidase complex subunit 3B [Cucumis sativus]) HSP 1 Score: 325.9 bits (834), Expect = 9.3e-86 Identity = 167/189 (88.36%), Postives = 167/189 (88.36%), Query Frame = 0
BLAST of CsGy2G003850 vs. NCBI nr
Match: XP_008454895.1 (PREDICTED: signal peptidase complex subunit 3B [Cucumis melo] >AAO45754.1 signal peptidase protein-like protein [Cucumis melo subsp. melo]) HSP 1 Score: 317.4 bits (812), Expect = 3.3e-83 Identity = 163/189 (86.24%), Postives = 164/189 (86.77%), Query Frame = 0
BLAST of CsGy2G003850 vs. NCBI nr
Match: XP_022946298.1 (signal peptidase complex subunit 3B [Cucurbita moschata] >XP_023545834.1 signal peptidase complex subunit 3B [Cucurbita pepo subsp. pepo]) HSP 1 Score: 312.8 bits (800), Expect = 8.1e-82 Identity = 159/189 (84.13%), Postives = 163/189 (86.24%), Query Frame = 0
BLAST of CsGy2G003850 vs. NCBI nr
Match: XP_022999140.1 (signal peptidase complex subunit 3B [Cucurbita maxima]) HSP 1 Score: 311.6 bits (797), Expect = 1.8e-81 Identity = 159/189 (84.13%), Postives = 163/189 (86.24%), Query Frame = 0
BLAST of CsGy2G003850 vs. NCBI nr
Match: XP_022150797.1 (signal peptidase complex subunit 3B-like [Momordica charantia]) HSP 1 Score: 307.8 bits (787), Expect = 2.6e-80 Identity = 155/189 (82.01%), Postives = 162/189 (85.71%), Query Frame = 0
BLAST of CsGy2G003850 vs. TAIR10
Match: AT5G27430.1 (Signal peptidase subunit) HSP 1 Score: 265.4 bits (677), Expect = 2.7e-71 Identity = 130/189 (68.78%), Postives = 149/189 (78.84%), Query Frame = 0
BLAST of CsGy2G003850 vs. TAIR10
Match: AT3G05230.1 (Signal peptidase subunit) HSP 1 Score: 252.7 bits (644), Expect = 1.8e-67 Identity = 124/189 (65.61%), Postives = 148/189 (78.31%), Query Frame = 0
BLAST of CsGy2G003850 vs. Swiss-Prot
Match: sp|Q53YF3|SPC3B_ARATH (Signal peptidase complex subunit 3B OS=Arabidopsis thaliana OX=3702 GN=At5g27430 PE=2 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 4.9e-70 Identity = 130/189 (68.78%), Postives = 149/189 (78.84%), Query Frame = 0
BLAST of CsGy2G003850 vs. Swiss-Prot
Match: sp|Q9MA96|SPC3A_ARATH (Signal peptidase complex subunit 3A OS=Arabidopsis thaliana OX=3702 GN=At3g05230 PE=2 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 3.3e-66 Identity = 124/189 (65.61%), Postives = 148/189 (78.31%), Query Frame = 0
BLAST of CsGy2G003850 vs. Swiss-Prot
Match: sp|Q9LGB4|SPCS3_ORYSJ (Probable signal peptidase complex subunit 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0131800 PE=3 SV=2) HSP 1 Score: 117.9 bits (294), Expect = 1.3e-25 Identity = 63/159 (39.62%), Postives = 78/159 (49.06%), Query Frame = 0
BLAST of CsGy2G003850 vs. Swiss-Prot
Match: sp|B0G180|SPCS3_DICDI (Signal peptidase complex subunit 3 OS=Dictyostelium discoideum OX=44689 GN=spcs3 PE=3 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 2.6e-15 Identity = 51/188 (27.13%), Postives = 88/188 (46.81%), Query Frame = 0
BLAST of CsGy2G003850 vs. Swiss-Prot
Match: sp|P28687|SPCS3_CHICK (Signal peptidase complex subunit 3 OS=Gallus gallus OX=9031 GN=SPC22 PE=1 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 4.5e-15 Identity = 41/90 (45.56%), Postives = 60/90 (66.67%), Query Frame = 0
BLAST of CsGy2G003850 vs. TrEMBL
Match: tr|A0A1S3BZ61|A0A1S3BZ61_CUCME (Signal peptidase complex subunit 3 OS=Cucumis melo OX=3656 GN=LOC103495199 PE=3 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 2.2e-83 Identity = 163/189 (86.24%), Postives = 164/189 (86.77%), Query Frame = 0
BLAST of CsGy2G003850 vs. TrEMBL
Match: tr|Q84KA8|Q84KA8_CUCME (Signal peptidase complex subunit 3 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 2.2e-83 Identity = 163/189 (86.24%), Postives = 164/189 (86.77%), Query Frame = 0
BLAST of CsGy2G003850 vs. TrEMBL
Match: tr|A0A2P6R6T7|A0A2P6R6T7_ROSCH (Signal peptidase complex subunit 3 OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0454281 PE=3 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 6.8e-77 Identity = 148/189 (78.31%), Postives = 159/189 (84.13%), Query Frame = 0
BLAST of CsGy2G003850 vs. TrEMBL
Match: tr|A0A2P5CTT2|A0A2P5CTT2_PARAD (Signal peptidase complex subunit 3 OS=Parasponia andersonii OX=3476 GN=PanDNF1 PE=3 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 1.2e-76 Identity = 147/189 (77.78%), Postives = 159/189 (84.13%), Query Frame = 0
BLAST of CsGy2G003850 vs. TrEMBL
Match: tr|A0A2P5C684|A0A2P5C684_9ROSA (Signal peptidase complex subunit 3 OS=Trema orientalis OX=63057 GN=TorDNF1 PE=3 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 1.5e-76 Identity = 147/189 (77.78%), Postives = 159/189 (84.13%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|